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CmoCh03G006610 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGGAGAATATGCTGAACCCAAAAACGTTGATCAACTCATCTCAAAAGGTATGATTTATGATTTGGGTCGAGTTGCTAACTTACTTAGGTTGAGTTTGAGTTGATTGTGCTGAGTATTAATAACAAAATACATTCAATTAATTTTGCAAGAGAAACAAACAAAACTCTAGATTCTGGGTGATTTTTAGGGCAATAAACATGATTTGTATAATAATCTTGAGTGGTCAAAGGGAATTGATTCATGTGGATTCTTTTCTCTAGAATTGGGAGACACCCACTCATTGCCAGGCTTTAATGTTGAGAACCCACATTGCAATGCCAAGCCTTATGGTTTGATAAATACCAAATTATTATTATTTATTAGTATTATTATTTTGTACATCTGTACGTTTTTCTCTCCCTCTCTGTTCATCCGTACTTCATATCTGTGTCATATTGATCCAGTCGTTTAACATTAGTGTTCTAACATTGAAGTTTTGAAAAATATAGATTTGAATATTTGTTTGAATATTTGTTTCCGTAATGTTCTAAGTTCAAGATTTGGAACCTGAATTCCCTAATGACCTTAACATTCCACTGCATCTCTCGTGATATAATCACGTTAATTACGCTAAGAGGGTTATTAATGTTCATAAACTAATATCAGTCATTTTTAAATCTTTTTTAAAAATGGAACATGAATACTCTAAACCAAACATATTTCTCTTTAGAATTCGTATGATTTAACAACAATGATTATTATCTTGAATCTTGTTGGTATGAATAGTAACTCTAATTTCTTTTAAATGTTTTTTTTAATAGGATATGATTCACCTCAAATGTGATATTCATTAATTTACTTTACTCTTTCCGAGGGACAGAACAATTTGGATAAAGTTTATATAGTTTATAATATAAAGATATGAAAAGATTTTGACGAATTCAGCTGTAAATTCATTTAAAAAAATGGAAGCCAACAATAAATTCATGAATTTATTACACAATTACGTTCTTTTGTTCTTTTATTTATTATTATTATTATTTTTTTTGGTGACTGATAATAGAATCGTTGATTATTCTTATCCTTGAAGGAAGTGGATTGCATTACATTCATGCACCTCCACATTCATCCGCTACCGTAAAGATTTTTGCTCTGTTTTTCGCTCTGCGCCCTTCACATGTTCGACAAAATGCCTGACTGAACCTCTTCTCATGTCTCCCTCGTGGCGTCTCTCCACGACCGGGGCCTCACTGTCTTCTCTCAATTTTTGACCATGTGGTTTGTTTTCTCTCTTCCTTGCTCCAACCCTTAACTTAAAATCTCATGCCCACTTTCTCTTTTTTGCCATTTCCCTCTGTTATAATGAGAAATTTTACTCTTTATCTCTCAAACTGAAAATTATGGTGTTCTATAGAGCAATAGTTTACTTGATTTTTGTGTTAGAACTCCACTGTAGAATGACTTCTTAAAGTTCTTACAAAGTGATTGATGAGCATTTGTGGATTTTCATAACCAGCTCTTTAGGTAACTTTCTCTTCCCCCCATTGTGTTAGCCGCATGCCCCGCCCTTTGTCTGCTGCTGCATTACAAACATTACTATAATATTGGAATGGTAGTAGCAATGTTTGCTCATTGTAAGCCTAGATTCATGGCTATAGCTATTAACAAAGCCACCATTTAAAAGGGGTAGCCACTTTTTATTTCTATGCACATTCTTCTTCATGGGTGGAGACAAAACATGGGTCGAGAATATTTAGGTTTGAATTAGCTGATTCTTTTTTCGCCCACATGATTATTCATTTTGATTAATCTTAAACTATGTTGGGTTTAGGAGAGCCCAATAATTGGGGAGGCAGGGTGGCATTGGTATCATTATGGCCTGCAACTATGCCAACATGTTCAATACTTTATTATTGTATATTGTTGTCAGAGCTTGATGTTGGCCAATTGGTGGAGCATTTGATTAAAAAATTTGACATAGATGCTCAGATTGTAGGCTGAAACTGTTACAAGAGAATCAAACAGAGCTGAGCCTCTGGTCTATAACGCTGTGGCTTTGACATGCATGCATACAGACTTTGTTAGCTTCTCTTTTCCATATAAATTGGCTGTTATGTTGGTTGGTTTTGCTCAAGCCATTCAATTCTCTTGTGAGTTTCAGCAATTTGCACACCAAGGATGGTGATCTCATCGATATTCACCGATGCCCACCAGCCTGTTAGATCGGTTAGCTTGCCTGCGAGGGTGGAGCTCGAGCCAGAACCATTGCTGGAGAGCCTAAAATCCTTTCAAGTTTCGTCTTTCAATGCGAAAACGACTTCTTTTGGACTCGAAGGGATTCGAGCTGCATTGGTTGGGCTAGCAGAGTTGTATAACTCTGTTGGGGAGCTTGTTCAGTCTTCTTCCACTCAGCAAGCTCTTGTTCACTATAAGGAGGGGAAGCTTGTGGAAGAGGCTTTAACTGAGTCTGTTATATTGATAGATTCTTGTTGCTCTGCAAGAGACATAATCCTTATGATGAAACAAAATATACAAACCCTTCAATCGGCTTTACGTCGAAAAGTAGCAGATTCGAGCATCGAAAGCCACGTTCGTGCCCACTTCAGCTTCCGAAGGAAAGCGAAGAAAGACATTGGAAGCTTCCTCGGTTCATTGAAGCAAATGCAAAGTAATAGAACAACAAGCTTCCCTTTATTGGATCTACCAAATCATGATTTGTTGCCTCTTATCAGACTGCTAAGAGAAGCAAGAACCATCAGCATCTCCATCTTCGGAGAGCTTCTAGCATTCCTATCGACGTCGGTGGCGAAGGGGAAGGCTAGCGGGTGGTCATTGGTCTCACAATTGATGCCCACGATCAGGTCGAGATCGGGGAAAGGACGGAAAATAGTAAATGAGTTGGAGAGTGTGGATATTGCTCTCCATTCTCTCCTTGGCCATGGGAGAGAAAACGAAAGCAATGATAAAAAAGCTGAAGTTCAAATGGCACAAAGAAGGCTTAGAACATTGGCGTCAAGTTTTGAAGGAATAGAGAGTGAATTGGATTGCATGTTCAGATGTTTAGTTAAATATAGAGTGTGTTTTCTTAACATGCTGGTTCATTGAATTGTTGAGATCTCAAAACATTCCAAAGTCTTGTACATTTTAGTCACTTTGTGGTCACAATTTTATCTGAGATAAATATAACCCGTCATTCTTTGATAGTACGAAACTCAAACTCTTAAGTGTAGTGTAATAACTAAGTCCACT ATGGCAGGAGAATATGCTGAACCCAAAAACGTTGATCAACTCATCTCAAAAGCAATTTGCACACCAAGGATGGTGATCTCATCGATATTCACCGATGCCCACCAGCCTGTTAGATCGGTTAGCTTGCCTGCGAGGGTGGAGCTCGAGCCAGAACCATTGCTGGAGAGCCTAAAATCCTTTCAAGTTTCGTCTTTCAATGCGAAAACGACTTCTTTTGGACTCGAAGGGATTCGAGCTGCATTGGTTGGGCTAGCAGAGTTGTATAACTCTGTTGGGGAGCTTGTTCAGTCTTCTTCCACTCAGCAAGCTCTTGTTCACTATAAGGAGGGGAAGCTTGTGGAAGAGGCTTTAACTGAGTCTGTTATATTGATAGATTCTTGTTGCTCTGCAAGAGACATAATCCTTATGATGAAACAAAATATACAAACCCTTCAATCGGCTTTACGTCGAAAAGTAGCAGATTCGAGCATCGAAAGCCACGTTCGTGCCCACTTCAGCTTCCGAAGGAAAGCGAAGAAAGACATTGGAAGCTTCCTCGGTTCATTGAAGCAAATGCAAAGTAATAGAACAACAAGCTTCCCTTTATTGGATCTACCAAATCATGATTTGTTGCCTCTTATCAGACTGCTAAGAGAAGCAAGAACCATCAGCATCTCCATCTTCGGAGAGCTTCTAGCATTCCTATCGACGTCGGTGGCGAAGGGGAAGGCTAGCGGGTGGTCATTGGTCTCACAATTGATGCCCACGATCAGGTCGAGATCGGGGAAAGGACGGAAAATAGTAAATGAGTTGGAGAGTGTGGATATTGCTCTCCATTCTCTCCTTGGCCATGGGAGAGAAAACGAAAGCAATGATAAAAAAGCTGAAGTTCAAATGGCACAAAGAAGGCTTAGAACATTGGCGTCAAGTTTTGAAGGAATAGAGAGTGAATTGGATTGCATGTTCAGATGTTTAGTTAAATATAGAGTGTGTTTTCTTAACATGCTGGTTCATTGAATTGTTGAGATCTCAAAACATTCCAAAGTCTTGTACATTTTAGTCACTTTGTGGTCACAATTTTATCTGAGATAAATATAACCCGTCATTCTTTGATAGTACGAAACTCAAACTCTTAAGTGTAGTGTAATAACTAAGTCCACT ATGGCAGGAGAATATGCTGAACCCAAAAACGTTGATCAACTCATCTCAAAAGCAATTTGCACACCAAGGATGGTGATCTCATCGATATTCACCGATGCCCACCAGCCTGTTAGATCGGTTAGCTTGCCTGCGAGGGTGGAGCTCGAGCCAGAACCATTGCTGGAGAGCCTAAAATCCTTTCAAGTTTCGTCTTTCAATGCGAAAACGACTTCTTTTGGACTCGAAGGGATTCGAGCTGCATTGGTTGGGCTAGCAGAGTTGTATAACTCTGTTGGGGAGCTTGTTCAGTCTTCTTCCACTCAGCAAGCTCTTGTTCACTATAAGGAGGGGAAGCTTGTGGAAGAGGCTTTAACTGAGTCTGTTATATTGATAGATTCTTGTTGCTCTGCAAGAGACATAATCCTTATGATGAAACAAAATATACAAACCCTTCAATCGGCTTTACGTCGAAAAGTAGCAGATTCGAGCATCGAAAGCCACGTTCGTGCCCACTTCAGCTTCCGAAGGAAAGCGAAGAAAGACATTGGAAGCTTCCTCGGTTCATTGAAGCAAATGCAAAGTAATAGAACAACAAGCTTCCCTTTATTGGATCTACCAAATCATGATTTGTTGCCTCTTATCAGACTGCTAAGAGAAGCAAGAACCATCAGCATCTCCATCTTCGGAGAGCTTCTAGCATTCCTATCGACGTCGGTGGCGAAGGGGAAGGCTAGCGGGTGGTCATTGGTCTCACAATTGATGCCCACGATCAGGTCGAGATCGGGGAAAGGACGGAAAATAGTAAATGAGTTGGAGAGTGTGGATATTGCTCTCCATTCTCTCCTTGGCCATGGGAGAGAAAACGAAAGCAATGATAAAAAAGCTGAAGTTCAAATGGCACAAAGAAGGCTTAGAACATTGGCGTCAAGTTTTGAAGGAATAGAGAGTGAATTGGATTGCATGTTCAGATGTTTAGTTAAATATAGAGTGTGTTTTCTTAACATGCTGGTTCATTGA MAGEYAEPKNVDQLISKAICTPRMVISSIFTDAHQPVRSVSLPARVELEPEPLLESLKSFQVSSFNAKTTSFGLEGIRAALVGLAELYNSVGELVQSSSTQQALVHYKEGKLVEEALTESVILIDSCCSARDIILMMKQNIQTLQSALRRKVADSSIESHVRAHFSFRRKAKKDIGSFLGSLKQMQSNRTTSFPLLDLPNHDLLPLIRLLREARTISISIFGELLAFLSTSVAKGKASGWSLVSQLMPTIRSRSGKGRKIVNELESVDIALHSLLGHGRENESNDKKAEVQMAQRRLRTLASSFEGIESELDCMFRCLVKYRVCFLNMLVH Homology
BLAST of CmoCh03G006610 vs. ExPASy TrEMBL
Match: A0A6J1GDT1 (uncharacterized protein LOC111453085 OS=Cucurbita moschata OX=3662 GN=LOC111453085 PE=4 SV=1) HSP 1 Score: 579.7 bits (1493), Expect = 7.7e-162 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0
BLAST of CmoCh03G006610 vs. ExPASy TrEMBL
Match: A0A6J1II33 (uncharacterized protein LOC111477670 OS=Cucurbita maxima OX=3661 GN=LOC111477670 PE=4 SV=1) HSP 1 Score: 558.5 bits (1438), Expect = 1.8e-155 Identity = 298/308 (96.75%), Postives = 305/308 (99.03%), Query Frame = 0
BLAST of CmoCh03G006610 vs. ExPASy TrEMBL
Match: A0A6J1BTH5 (uncharacterized protein LOC111005419 OS=Momordica charantia OX=3673 GN=LOC111005419 PE=4 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 2.0e-130 Identity = 255/314 (81.21%), Postives = 279/314 (88.85%), Query Frame = 0
BLAST of CmoCh03G006610 vs. ExPASy TrEMBL
Match: A0A0A0KMP4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507490 PE=4 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 1.6e-127 Identity = 250/309 (80.91%), Postives = 277/309 (89.64%), Query Frame = 0
BLAST of CmoCh03G006610 vs. ExPASy TrEMBL
Match: A0A5A7SKH1 (Putative Selection and upkeep of intraepithelial T-cells protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00750 PE=4 SV=1) HSP 1 Score: 447.2 bits (1149), Expect = 6.0e-122 Identity = 241/309 (77.99%), Postives = 272/309 (88.03%), Query Frame = 0
BLAST of CmoCh03G006610 vs. NCBI nr
Match: KAG7034047.1 (hypothetical protein SDJN02_03773, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 622.1 bits (1603), Expect = 2.8e-174 Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0
BLAST of CmoCh03G006610 vs. NCBI nr
Match: XP_023544975.1 (uncharacterized protein LOC111804411 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 587.8 bits (1514), Expect = 5.8e-164 Identity = 313/324 (96.60%), Postives = 316/324 (97.53%), Query Frame = 0
BLAST of CmoCh03G006610 vs. NCBI nr
Match: XP_022949794.1 (uncharacterized protein LOC111453085 [Cucurbita moschata] >XP_022949795.1 uncharacterized protein LOC111453085 [Cucurbita moschata]) HSP 1 Score: 579.7 bits (1493), Expect = 1.6e-161 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0
BLAST of CmoCh03G006610 vs. NCBI nr
Match: XP_023544976.1 (uncharacterized protein LOC111804411 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023544977.1 uncharacterized protein LOC111804411 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023544978.1 uncharacterized protein LOC111804411 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 563.5 bits (1451), Expect = 1.2e-156 Identity = 300/308 (97.40%), Postives = 303/308 (98.38%), Query Frame = 0
BLAST of CmoCh03G006610 vs. NCBI nr
Match: XP_022977307.1 (uncharacterized protein LOC111477670 [Cucurbita maxima]) HSP 1 Score: 558.5 bits (1438), Expect = 3.8e-155 Identity = 298/308 (96.75%), Postives = 305/308 (99.03%), Query Frame = 0
BLAST of CmoCh03G006610 vs. TAIR 10
Match: AT4G35680.1 (Arabidopsis protein of unknown function (DUF241) ) HSP 1 Score: 141.7 bits (356), Expect = 1.0e-33 Identity = 106/307 (34.53%), Postives = 172/307 (56.03%), Query Frame = 0
BLAST of CmoCh03G006610 vs. TAIR 10
Match: AT3G51410.1 (Arabidopsis protein of unknown function (DUF241) ) HSP 1 Score: 113.6 bits (283), Expect = 3.0e-25 Identity = 98/301 (32.56%), Postives = 150/301 (49.83%), Query Frame = 0
BLAST of CmoCh03G006610 vs. TAIR 10
Match: AT4G35660.1 (Arabidopsis protein of unknown function (DUF241) ) HSP 1 Score: 107.8 bits (268), Expect = 1.6e-23 Identity = 98/310 (31.61%), Postives = 157/310 (50.65%), Query Frame = 0
BLAST of CmoCh03G006610 vs. TAIR 10
Match: AT4G35690.1 (Arabidopsis protein of unknown function (DUF241) ) HSP 1 Score: 90.5 bits (223), Expect = 2.7e-18 Identity = 78/300 (26.00%), Postives = 150/300 (50.00%), Query Frame = 0
BLAST of CmoCh03G006610 vs. TAIR 10
Match: AT2G17070.1 (Arabidopsis protein of unknown function (DUF241) ) HSP 1 Score: 79.0 bits (193), Expect = 8.2e-15 Identity = 85/301 (28.24%), Postives = 137/301 (45.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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