CmoCh03G006520 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G006520
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	heterogeneous nuclear ribonucleoprotein H2 isoform X1
Location	Cmo_Chr03: 5900474 .. 5905759 (+)
RNA-Seq Expression	CmoCh03G006520
Synteny	CmoCh03G006520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAGCAAGGGTATTTAGGTAATCTTGAATCCGCAATCAAAGTTTAACCCTAGTTGTGTCTGTGTTCAATTTCGGTGGTGGAATCGGAAGGCAAATCGAAGTTCAGAATCGTCCGTAATCTTGGTTAGGGTTTCCCTTTTCCCGCTATCTTCCCTTCTATTTCCCTCTGAATCCACTCCCTTATTCTTCATAATCGCTCCAATTTACTCCTTTTCGTTGGATTATCAGACTAGCTTTTGGGGATTCAAGACAATCATGTACGGACCAAGAGGGTAAGTCCAGAATTTCTGACCTTGTTTATGACTCTTCCGTGTCGTTTTTTCTTGTTTCGTTTCTTGGTTGTTGTGTTTATACCGGCGTTCTTCTTTTTGCTGGGTTGCTTGTCTTGTTTTGTTGGAATATCTGGGAATTTTGATGGATTCTGCTTGAAATTGCGTGTTGGGATCGAGGAATGAGGAGCTCCTCTGTTGTTCTCCAAGGCCTCTGTTGATTTGTATGCCAATGTTGTGAAATGTGTTTTTCCAGTAAAAATATTCTTGAAGAACAACATATGTTTTGTCAGTGTAATTTAAAAGTAAAGTAGTTTTTTGTTAAAAGAAAATGGAAGCGCGATTTGTGAAGTTATCCATGCGTTGAATGTTCTTTACATGATTCTCTTCTTTATATTTAAACTTTAAAATGAACTCATCGCTGTGGGTGGCTTTTCTAGGCCTTTCTCGGATAAGATAGATATCAAGATTCTTGTCATAGGATGCCATATATCTGAATCCTGTTAGGATTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGTTTTTCAACCGAAAAGCAAGAATTCGATTACGGTATTCAGTGTCTCATGATCTATCTCTCTTTTTTGTACCACTGTCAAATTTAGAAGAAGCTTTTGCAGCGGTATTTCGGCTATGAAGGCCAGTGATTTCATTGGCTAATTAATGTTCTCATTGGTAGTCTTTACTTTACATCGAGGGCTTACATTGGTATAAACATGGGAAAATCATTTTTTATTGCTTCTTGATTTGATGTTCATTGAGCCTGAAATTTACTTTTTGCTGCTACGTATAGAAATAATTATCCCTTCCATATTTAGTTGAATTGATTTGTTTGTAGGAGTGGTAATGGCATGTAAGTTCATTGACCCAATAGGTTTTAGAGGTGTAGGTTGGGCTTGGTTTTATCAACTTGCTTGAGCGGGGATTTTCCTTTCTTTTTCTGGGTTGGTAATTGAAGGGCAATGTTGGGGAGCGGGGGGGTTTCGGATGGGTACGAAGTCGGCTCAAAAAGACAAAGAATGATGGAACCGAATCCCTACTTCGCAGTTAGCAGCAGCACTGCTGGATTTCAACCTTACGGCTATGGGAGTTTTCCACCTACTCATGCCTTTCCCGTGGTTCGCCTTAGAGGACTTCCCTTCAACTGCACTGACATTGATATTTTCAAGTTCTTTGCTGGACTGGACATTGTGGATGTGCTGCTTGTCAACAAGAATGGGCGATTCATGGGAGAAGCCTTTGTTGTCTTTGCTGGATCTTTGCAGGTTGAGTTCGCGTTGCAACGGGATCGACAGAATATGGGGCGTAGATATGTAGAAGTCTTTAGCTGCAAAAGGCAGGATTATTATAATGCTGTTGCTGCTGAAGTAAATTATGAGGGCATTTATGATAATGACTACAATGGAAGTCCTCCTCCTCGACAAAAGAGGATCAGCGACAAGGACCAGATGGAATACACCGAGATACTGAAGCTGCGTGGTCTCCCCTTCTCTGTGACAAAATCCAACATCATTGAATTTTTCGGAGAGTTCGACCTTGCAGAAGAAAGGATACATATTGCAAGCCGTTCAGATGGGAAGGCTACTGGGGAGGCTTATGTGGAGTTTGCTTCAGCAGAGGATGCAAAGAGAGCAATGAGCAAGGACAAGATGACAATTGGATCGAGGTACGTGGAGTTGTTTCCTTCAACCCCAAATGAAGCTAGGAGAGCTGAGTCAAGGTCAAGACAGTGATATGTAGGTAACTTGATCATGGAGTCTAAAGTGTTCTCTATTGCTATATTTTGGTGCCTAGGCTTCGCTGTTCTTGTAGTTTTCCAGTTTGTAGGATGACTGTCGTTGTGGTATAGTTCTCTGCAGTTTAGGCTGAATCTGTGGAGTAAATAGTTACTGCATGTTGAGATTGAAGTCCTATGAGTTCATAACTTGGTTAGAACACCGACTTTTTTCCTCAATTTCACCACATTTTTTTAGAGTTACTCTTCTCTGTGCGGTTTACTTGAAAAATGAGATGAGGCCTAGCCGACAGCTCCTGAAATTCAATTATTCAAGGTACTATAAAGGGCCATACCAATAATGGCTGAACAATACCCAATAGCCAGATCTAAAAGCTGTCATGAATGGTGGATTCTGTTCATCTGCCACTTTTCATACATAAGGCGAGGGTCAGTGAATGTTTTCATTTAGAATTCAGGATAAATTGTTAGCTTAACTCTGTTTTGAAAGTACTCTTGTTGGAATCTGAAATGGTGCGACTGTTTTTTGTGAATGATATTTTATTATGTATGAGAATGTTGTGATTGTTCTTGAATAATCATCAATAGGCTTTTTTGTGGAGGTTCTTGAAGTTGAATGATAGGTTTTTTCTGCCTCAAAAGATGAAACTAGCTCACTCATAAGAACTCGACCAAACTGATTAACGCATGAACATTGAAGGTGAGATTAATTTGAAACTTTCAAGATCGATGGAAAGTTTTCATTTACCACGAAACTGCTAAAAGAGCACGGTTTTGCAACAAATTCTAATTTACACAATTTAAGAGCATTTTGTATAATCTTTCTCTAGGAAAAAGTTATTTATTTATGGATTCTTTTAAATATAGTTACGGTTTATGAAATGTTATATATCGTTTTGTTGATCCTAAAGACTAAAGACGTTTGGATATCGAGATCAAAATCTATTTTCATTTACACGCGGGTTGAACTATCTACGATAATATGTAAGTTTATTATTTTACTATATTGCATCATTGAAACCTATAATCTTTTAAAAGAAACTGTCAGGTCATTCATTAATGGTGAATAATATTAGGAAGGGAAAATCCCTAAAAACCAGCCCAGATGGGTTTCAGGCATTTAAAAGATGGGCAACAGAAAATGGGAACTTGTGCGTGATTCTTAAGCCAAATGACGAAGAAGTTCAACATCCAATCACCATTCCATCTCCTGAAGAACCACTTTTGGTTCATTCTTTATTCTCTGCTTGGAGTTTTCTGCTCTTTGAATTTGTCTTCTTCACAGAACAGAATAAGAGCAGCTTCCATGTAAATCATCCATGTAAAGGGCTGTCTAAGTTTTCAGAGCTTTCGTTGTTTCACAGGTAATCTTTCCATCCATTTATGGAAGTTGGTTCTGGCACATGCCATGCTCTGACTCTGCTTGCTTTATCTGCTTCTCCTTCTCTGTTTGTCACTTTCTCCTCTTATTTCTGCTAACAACATCATCTGTTTCATGATTAAAGATGACGAGTTCTGGGTTCAGTACAGAGTTCCCAAATGTTGCAGATCCAATGCATGATTCATATCTATCTTGTTTTCCCAAGCTAAACGATGAGAAGTTTCTTCATCAAGACCTCAACTTCCTTCCTTGCTCTTCTTCAATGGCTGTATCTAAAGGGCCCGAGATTCATCAAATGAAAGAACTCTGTGAACCAGGTTTTGCTTCTTCAACTTCTTTTTACACAGATCATGTCCCTGTTATGAATGTTGGCTAACCAGGTGGGGAATTCCCAGTTCTTGCAAAGAAGAAAAGGAGAGCTACAAGTGAGCATATTGCCGGAATTGCTCTATCAGATCTGGCTAAATACTTTGATGTTCCTATTACAGAAGCTTCAAGAAGTCTAAATGTTGGATTAACAGTGCTGAAAAGAAAATGCAGAGAGTTTGGGATTCATCGATGGCCGCACAGGAAGATCAAGTCCATTGATGGTCTAATCCGAGATCTTCAGGTTATCATCCCTTTCTTTCTACTTTGCATTTGCAGCCTTGAAAGGCACACATAGTTTGTTTATGGAAAAGGGTGTTTGTTTGTTTGTTTGTTTGTTTGTAGGAAGAAGCAAAGCATAGAGAGGAAGATCAGAAAGCTTTGATGGCAGTGACAAAGAGGCAAATGATGTTGCAGAATGAAAGAGAGAGCATCGAGAGGACACCATTTAGAGAGCTGGAGAGTGAGACCAAGAGATTTAGGCAAGATGTTTTCAAGAGAAGGCATAAAGCTAGAGCTCTAGTAAGCCACAGTCCAGTTTAGTTTGCAGCAGCCATTATATTCAACAAAATAAATGACTTGCAAAGTAGTTTGTTACTTTTTTTAATCTCGATCTTGTCTCGAGATCAAGGTCTTTCAATGCAATATTGTATCTCATCTTGGTTCCCAATCGACATGGCCCACATGTCTTGATGTTATTCCGGGTCTCAGGATGTCGGCCATTACTAATCACTTGGTCATGTCATCGAAAATGGGTCCACGTGACTCTCATCTCATTAGGACATTCCAAACATCCATCCATCCGGGTTCTATCGAGGCATTGACCCTCGCGTGCCCATGTCAAGTCATTTACGGATACTGTACCGAATAACAAGTGTATAATTCAAACTTTGACACGTGGGCTAGGGCGCAATACTGGCACACCCATGCCATGCCACTCGATACTGTCCTTGAAAAACTCATTTCAAAGGAAGTCGCCCGAGACACTCGTCTCAGCACACTCACCCTCGCTGTGACACTCACGTGCCACGTGATAACTCACTTAGGCAAGAGGGAAATGTGCAACATCGGTTAAAAAATTAAAAAATTATATTTTCAATCCATAATGGGTTTGAATAATTGCTACAATGATATATCTCTAAAATGTATATTGTTCGGAGTCATATTGGATATGACACGACAATACATAACATAAACATCTGAAAAGGGAACTGTGATATCATTCTGGGATATCAGTACTAATGAGTAACTTGGCTCCTCAGATGGAACCAAGAGAAAACTACATAAATGACTGAGAAATATTCGAAAGAACAAATGAATTTCAATGAATAGTTAGATGAATTTGCCAATCTCTGGAACCAAAATCACGATCGAGGTTTGTGCAGACGAGGTCGATTGCAGAAAATTCGACCATTGGCCCGAACAAAACCTGCTATAGCTATGCTCAGGCCTGCCCACAGGATAGAAAAGAACAAGTGTCGAATATCATAGCGAGCTGCAAAAGATAA

mRNA sequence

ATGGGGAAGCAAGGACTAGCTTTTGGGGATTCAAGACAATCATGTACGGACCAAGAGGTTTTTCAACCGAAAAGCAAGAATTCGATTACGAAGAAGCTTTTGCAGCGGAGTGGTAATGGCATGGCAATGTTGGGGAGCGGGGGGGTTTCGGATGGGTACGAAGTCGGCTCAAAAAGACAAAGAATGATGGAACCGAATCCCTACTTCGCAGTTAGCAGCAGCACTGCTGGATTTCAACCTTACGGCTATGGGAGTTTTCCACCTACTCATGCCTTTCCCGTGGTTCGCCTTAGAGGACTTCCCTTCAACTGCACTGACATTGATATTTTCAAGTTCTTTGCTGGACTGGACATTGTGGATGTGCTGCTTGTCAACAAGAATGGGCGATTCATGGGAGAAGCCTTTGTTGTCTTTGCTGGATCTTTGCAGGTTGAGTTCGCGTTGCAACGGGATCGACAGAATATGGGGCGTAGATATGTAGAAGTCTTTAGCTGCAAAAGGCAGGATTATTATAATGCTGTTGCTGCTGAAGTAAATTATGAGGGCATTTATGATAATGACTACAATGGAAGTCCTCCTCCTCGACAAAAGAGGATCAGCGACAAGGACCAGATGGAATACACCGAGATACTGAAGCTGCGTGGTCTCCCCTTCTCTGTGACAAAATCCAACATCATTGAATTTTTCGGAGAGTTCGACCTTGCAGAAGAAAGGATACATATTGCAAGCCGTTCAGATGGGAAGGCTACTGGGGAGGCTTATGTGGAGTTTGCTTCAGCAGAGGATGCAAAGAGAGCAATGAGCAAGGACAAGATGACAATTGGATCGAGGTACGTGGAGTTGTTTCCTTCAACCCCAAATGAAGCTAGGAGAGCTGAGTCAAGAGTTACTCTTCTCTGTGCGGTTTACTTGAAAAATGAGATGAGGCCTAGCCGACAGCTCCTGAAATTCAATTATTCAAGGAAGGGAAAATCCCTAAAAACCAGCCCAGATGGGTTTCAGGCATTTAAAAGATGGGCAACAGAAAATGGGAACTTGTGCGTGATTCTTAAGCCAAATGACGAAGAAGTTCAACATCCAATCACCATTCCATCTCCTGAAGAACCACTTTTGGTTCATTCTTTATTCTCTGCTTGGAGTTTTCTGCTCTTTGAATTTGTCTTCTTCACAGAACAGAATAAGAGCAGCTTCCATATGACGAGTTCTGGGTTCAGTACAGAGTTCCCAAATGTTGCAGATCCAATGCATGATTCATATCTATCTTGTTTTCCCAAGCTAAACGATGAGAAGTTTCTTCATCAAGACCTCAACTTCCTTCCTTGCTCTTCTTCAATGGCTGTATCTAAAGGGCCCGAGATTCATCAAATGAAAGAACTCTGTGAACCAGGTGGGGAATTCCCAGTTCTTGCAAAGAAGAAAAGGAGAGCTACAAGTGAGCATATTGCCGGAATTGCTCTATCAGATCTGGCTAAATACTTTGATGTTCCTATTACAGAAGCTTCAAGAAGTCTAAATGTTGGATTAACAGTGCTGAAAAGAAAATGCAGAGAGTTTGGGATTCATCGATGGCCGCACAGGAAGATCAAGTCCATTGATGGTCTAATCCGAGATCTTCAGGAAGAAGCAAAGCATAGAGAGGAAGATCAGAAAGCTTTGATGGCAGTGACAAAGAGGCAAATGATGTTGCAGAATGAAAGAGAGAGCATCGAGAGGACACCATTTAGAGAGCTGGAGAGTGAGACCAAGAGATTTAGGCAAGATGTTTTCAAGAGAAGGCATAAAGCTAGAGCTCTAACGAGGTCGATTGCAGAAAATTCGACCATTGGCCCGAACAAAACCTGCTATAGCTATGCTCAGGCCTGCCCACAGGATAGAAAAGAACAAGTGTCGAATATCATAGCGAGCTGCAAAAGATAA

Coding sequence (CDS)

ATGGGGAAGCAAGGACTAGCTTTTGGGGATTCAAGACAATCATGTACGGACCAAGAGGTTTTTCAACCGAAAAGCAAGAATTCGATTACGAAGAAGCTTTTGCAGCGGAGTGGTAATGGCATGGCAATGTTGGGGAGCGGGGGGGTTTCGGATGGGTACGAAGTCGGCTCAAAAAGACAAAGAATGATGGAACCGAATCCCTACTTCGCAGTTAGCAGCAGCACTGCTGGATTTCAACCTTACGGCTATGGGAGTTTTCCACCTACTCATGCCTTTCCCGTGGTTCGCCTTAGAGGACTTCCCTTCAACTGCACTGACATTGATATTTTCAAGTTCTTTGCTGGACTGGACATTGTGGATGTGCTGCTTGTCAACAAGAATGGGCGATTCATGGGAGAAGCCTTTGTTGTCTTTGCTGGATCTTTGCAGGTTGAGTTCGCGTTGCAACGGGATCGACAGAATATGGGGCGTAGATATGTAGAAGTCTTTAGCTGCAAAAGGCAGGATTATTATAATGCTGTTGCTGCTGAAGTAAATTATGAGGGCATTTATGATAATGACTACAATGGAAGTCCTCCTCCTCGACAAAAGAGGATCAGCGACAAGGACCAGATGGAATACACCGAGATACTGAAGCTGCGTGGTCTCCCCTTCTCTGTGACAAAATCCAACATCATTGAATTTTTCGGAGAGTTCGACCTTGCAGAAGAAAGGATACATATTGCAAGCCGTTCAGATGGGAAGGCTACTGGGGAGGCTTATGTGGAGTTTGCTTCAGCAGAGGATGCAAAGAGAGCAATGAGCAAGGACAAGATGACAATTGGATCGAGGTACGTGGAGTTGTTTCCTTCAACCCCAAATGAAGCTAGGAGAGCTGAGTCAAGAGTTACTCTTCTCTGTGCGGTTTACTTGAAAAATGAGATGAGGCCTAGCCGACAGCTCCTGAAATTCAATTATTCAAGGAAGGGAAAATCCCTAAAAACCAGCCCAGATGGGTTTCAGGCATTTAAAAGATGGGCAACAGAAAATGGGAACTTGTGCGTGATTCTTAAGCCAAATGACGAAGAAGTTCAACATCCAATCACCATTCCATCTCCTGAAGAACCACTTTTGGTTCATTCTTTATTCTCTGCTTGGAGTTTTCTGCTCTTTGAATTTGTCTTCTTCACAGAACAGAATAAGAGCAGCTTCCATATGACGAGTTCTGGGTTCAGTACAGAGTTCCCAAATGTTGCAGATCCAATGCATGATTCATATCTATCTTGTTTTCCCAAGCTAAACGATGAGAAGTTTCTTCATCAAGACCTCAACTTCCTTCCTTGCTCTTCTTCAATGGCTGTATCTAAAGGGCCCGAGATTCATCAAATGAAAGAACTCTGTGAACCAGGTGGGGAATTCCCAGTTCTTGCAAAGAAGAAAAGGAGAGCTACAAGTGAGCATATTGCCGGAATTGCTCTATCAGATCTGGCTAAATACTTTGATGTTCCTATTACAGAAGCTTCAAGAAGTCTAAATGTTGGATTAACAGTGCTGAAAAGAAAATGCAGAGAGTTTGGGATTCATCGATGGCCGCACAGGAAGATCAAGTCCATTGATGGTCTAATCCGAGATCTTCAGGAAGAAGCAAAGCATAGAGAGGAAGATCAGAAAGCTTTGATGGCAGTGACAAAGAGGCAAATGATGTTGCAGAATGAAAGAGAGAGCATCGAGAGGACACCATTTAGAGAGCTGGAGAGTGAGACCAAGAGATTTAGGCAAGATGTTTTCAAGAGAAGGCATAAAGCTAGAGCTCTAACGAGGTCGATTGCAGAAAATTCGACCATTGGCCCGAACAAAACCTGCTATAGCTATGCTCAGGCCTGCCCACAGGATAGAAAAGAACAAGTGTCGAATATCATAGCGAGCTGCAAAAGATAA

Protein sequence

MGKQGLAFGDSRQSCTDQEVFQPKSKNSITKKLLQRSGNGMAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIASRSDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRVTLLCAVYLKNEMRPSRQLLKFNYSRKGKSLKTSPDGFQAFKRWATENGNLCVILKPNDEEVQHPITIPSPEEPLLVHSLFSAWSFLLFEFVFFTEQNKSSFHMTSSGFSTEFPNVADPMHDSYLSCFPKLNDEKFLHQDLNFLPCSSSMAVSKGPEIHQMKELCEPGGEFPVLAKKKRRATSEHIAGIALSDLAKYFDVPITEASRSLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHREEDQKALMAVTKRQMMLQNERESIERTPFRELESETKRFRQDVFKRRHKARALTRSIAENSTIGPNKTCYSYAQACPQDRKEQVSNIIASCKR

Homology

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BLAST of CmoCh03G006520 vs. ExPASy Swiss-Prot
Match: O81791 (Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 3.2e-36
Identity = 89/172 (51.74%), Postives = 120/172 (69.77%), Query Frame = 0


Query: 432 LHQDLNFLPCS---SSMAVSKGPEIHQMK----ELCEPGGEFPVLAKKKRRATSEHIAGI 491
           L QDLN LP S   S  +V++  E  + +    E  E   +  +L KKK+R  S H+A +
Sbjct: 184 LKQDLNCLPDSETESEESVNEKTEHSEFENDKTEQSESDAKTEIL-KKKKRTPSRHVAEL 243

Query: 492 ALSDLAKYFDVPITEASRSLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEA-K 551
           +L +L+KYFD+ I EASR+L VGLTVLK+KCREFGI RWPHRKIKS+D LI DLQ EA K
Sbjct: 244 SLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAEK 303

Query: 552 HREEDQKALMAVTKRQMMLQNERESIERTPFRELESETKRFRQDVFKRRHKA 596
            +E+++ A MAV K+Q  L+ E+ +I + PF E+  ETK+FRQ+ FK+RH+A
Sbjct: 304 QQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFRQENFKKRHRA 354

[Close]

BLAST of CmoCh03G006520 vs. ExPASy Swiss-Prot
Match: Q3US41 (Epithelial splicing regulatory protein 1 OS=Mus musculus OX=10090 GN=Esrp1 PE=1 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 5.6e-25
Identity = 73/208 (35.10%), Postives = 109/208 (52.40%), Query Frame = 0


Query: 94  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSLQVEFALQR 153
           VVR RGLP+  +D DI +FF GL+I      L +N  GR  GEA V F      + ALQR
Sbjct: 225 VVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQR 284

Query: 154 DRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEI 213
            + +MG RY+EV+    +D+        N    +              +S ++Q+    I
Sbjct: 285 HKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQF--------------LSKENQV----I 344

Query: 214 LKLRGLPFSVTKSNIIEFFGE---FDLAEERIHIASRSDGKATGEAYVEFASAEDAKRAM 273
           +++RGLPF+ T   ++ FFG+       +E I   +  DG+ TG+A+V FA  E A+ A+
Sbjct: 345 VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNAL 404

Query: 274 SKDKMTIGSRYVELFPSTPNEARRAESR 296
            K K  +G RY+ELF ST  E ++  +R
Sbjct: 405 RKHKELLGKRYIELFRSTAAEVQQVLNR 414

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BLAST of CmoCh03G006520 vs. ExPASy Swiss-Prot
Match: Q6NXG1 (Epithelial splicing regulatory protein 1 OS=Homo sapiens OX=9606 GN=ESRP1 PE=1 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 7.4e-25
Identity = 73/208 (35.10%), Postives = 109/208 (52.40%), Query Frame = 0


Query: 94  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSLQVEFALQR 153
           VVR RGLP+  +D DI +FF GL+I      L +N  GR  GEA V F      + ALQR
Sbjct: 226 VVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQR 285

Query: 154 DRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEI 213
            + +MG RY+EV+    +D+        N    +              +S ++Q+    I
Sbjct: 286 HKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQF--------------LSKENQV----I 345

Query: 214 LKLRGLPFSVTKSNIIEFFGE---FDLAEERIHIASRSDGKATGEAYVEFASAEDAKRAM 273
           +++RGLPF+ T   ++ FFG+       +E I   +  DG+ TG+A+V FA  E A+ A+
Sbjct: 346 VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNAL 405

Query: 274 SKDKMTIGSRYVELFPSTPNEARRAESR 296
            K K  +G RY+ELF ST  E ++  +R
Sbjct: 406 RKHKDLLGKRYIELFRSTAAEVQQVLNR 415

[Close]

BLAST of CmoCh03G006520 vs. ExPASy Swiss-Prot
Match: B2RYD2 (Epithelial splicing regulatory protein 1 OS=Rattus norvegicus OX=10116 GN=Esrp1 PE=2 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 7.4e-25
Identity = 73/208 (35.10%), Postives = 109/208 (52.40%), Query Frame = 0


Query: 94  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSLQVEFALQR 153
           VVR RGLP+  +D DI +FF GL+I      L +N  GR  GEA V F      + ALQR
Sbjct: 226 VVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQR 285

Query: 154 DRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEI 213
            + +MG RY+EV+    +D+        N    +              +S ++Q+    I
Sbjct: 286 HKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQF--------------LSKENQV----I 345

Query: 214 LKLRGLPFSVTKSNIIEFFGE---FDLAEERIHIASRSDGKATGEAYVEFASAEDAKRAM 273
           +++RGLPF+ T   ++ FFG+       +E I   +  DG+ TG+A+V FA  E A+ A+
Sbjct: 346 VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNAL 405

Query: 274 SKDKMTIGSRYVELFPSTPNEARRAESR 296
            K K  +G RY+ELF ST  E ++  +R
Sbjct: 406 RKHKDLLGKRYIELFRSTAAEVQQVLNR 415

[Close]

BLAST of CmoCh03G006520 vs. ExPASy Swiss-Prot
Match: Q5E9J1 (Heterogeneous nuclear ribonucleoprotein F OS=Bos taurus OX=9913 GN=HNRNPF PE=2 SV=3)

HSP 1 Score: 115.9 bits (289), Expect = 1.6e-24
Identity = 73/202 (36.14%), Postives = 105/202 (51.98%), Query Frame = 0


Query: 94  VVRLRGLPFNCTDIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSLQVEFAL 153
           VV+LRGLP++C+  D+  F +   I D +     +  + GR  GEAFV       V+ AL
Sbjct: 12  VVKLRGLPWSCSVEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLAL 71

Query: 154 QRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYT 213
           ++DR++MG RY+EVF   R +               D     S P      +D       
Sbjct: 72  KKDRESMGHRYIEVFKSHRTE--------------MDWVLKHSGPNSADTAND------- 131

Query: 214 EILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIASRSDGKATGEAYVEFASAEDAKRAMS 273
             ++LRGLPF  TK  II+FF   ++    I +    +GK TGEA+V+FAS E A++A+ 
Sbjct: 132 GFVRLRGLPFGCTKEEIIQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 191

Query: 274 KDKMTIGSRYVELFPSTPNEAR 291
           K K  IG RY+E+F S+  E R
Sbjct: 192 KHKERIGHRYIEVFKSSQEEVR 192

[Close]

BLAST of CmoCh03G006520 vs. ExPASy TrEMBL
Match: A0A444WWB9 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B10g100373 PE=3 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 1.8e-159
Identity = 337/619 (54.44%), Postives = 410/619 (66.24%), Query Frame = 0


Query: 42  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGY-GSFPPTHAFPVVRLRGL 101
           AMLGSGGVSDGYEVGSKRQRMME NPYFAVSS T  FQPYGY G F P   FPVVRLRGL
Sbjct: 238 AMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGTGSFQPYGYGGGFQPPPPFPVVRLRGL 297

Query: 102 PFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYV 161
           PFNCTDIDI KFFAGL IVDVLLVNK+GRF GEAFVVFAG++QVEFALQRDRQNMGRRYV
Sbjct: 298 PFNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYV 357

Query: 162 EVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPP-RQKRISDKDQMEYTEILKLRGLPFS 221
           EVF CK+QDYYNAVA+EVNYEGIYDNDY+GSPPP R KR SDKDQMEYTEILK+RGLPFS
Sbjct: 358 EVFRCKKQDYYNAVASEVNYEGIYDNDYHGSPPPSRTKRFSDKDQMEYTEILKMRGLPFS 417

Query: 222 VTKSNIIEFFGEFDLAEERIHIASRSDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYV 281
            TK+ II+FF +F L E+R+HIA R DGKATGEAYVEF S ++AKRAM KDKMTIGSRYV
Sbjct: 418 ATKAQIIDFFKDFKLIEDRVHIACRPDGKATGEAYVEFVSPDEAKRAMCKDKMTIGSRYV 477

Query: 282 ELFPSTPNEARRAESRVTLLCAVYLKNEMRPSRQLLKFNYSRKGKSLKTSPDGFQAFKRW 341
           ELFPST +EARRAESR   +  + +KN +  +  LL F  + + + L  S   +Q     
Sbjct: 478 ELFPSTTDEARRAESRSRHIFNLAMKNTLLTT--LLVFKNTIR-EELIRSVHVYQIKDGK 537

Query: 342 ATENGNLCVILKPNDEEVQHPITIPSPEEPLLVHSLFSAWSFLLFEFVFFTEQNKSSFHM 401
             E     V  +           I   ++ L V  +   +   ++  +F       SFH 
Sbjct: 538 VREVEREFVFSESGSYGEMRSTPILRLQKKLCVAEVSEGYQNGVWLCIF-------SFHR 597

Query: 402 TSSGFSTEFPNVADPMHDSYLSCFP----------KLNDEK------------------- 461
                 +  PN+     +  L   P          KL  +K                   
Sbjct: 598 DHKPQFSSIPNLLLLSRNLKLRTIPTLLRDLRVIYKLEKDKDVLSDSTGEERQGNNKDSQ 657

Query: 462 -------FLHQDLNFLPCSSSMAVSKGPEIHQMKELCEPGGEFPVLAKKKRRATSEHIAG 521
                   L QDLNFLP    M  S+ P+ +++     P  +    A+KK+RA+S+ +A 
Sbjct: 658 PLRKVVPVLTQDLNFLPYEDDM--SESPD-NKLDVQALPDAD---SAEKKKRASSDRVAK 717

Query: 522 IALSDLAKYFDVPITEASRSLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAK 581
           I LS+L KYFD+PI EASR LNVGLTVLKRKCREFGI RWPHRKIKS+D LI ++QEEA 
Sbjct: 718 ITLSELVKYFDIPIVEASRRLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIHEIQEEAN 777

Query: 582 HREEDQK-ALMAVTKRQMMLQNERESIERTPFRELESETKRFRQDVFKRRHKARA---LT 619
           ++E D K A +A  +++ ML++E+E+IER PF +++SETK+ RQD+FKRRH+ARA   L 
Sbjct: 778 NQESDDKAAALAAIEKRRMLESEKENIERKPFMDIQSETKKLRQDIFKRRHRARAQKHLG 837

[Close]

BLAST of CmoCh03G006520 vs. ExPASy TrEMBL
Match: A0A444WWD1 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B10g100373 PE=3 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 1.8e-159
Identity = 337/619 (54.44%), Postives = 410/619 (66.24%), Query Frame = 0


Query: 42  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGY-GSFPPTHAFPVVRLRGL 101
           AMLGSGGVSDGYEVGSKRQRMME NPYFAVSS T  FQPYGY G F P   FPVVRLRGL
Sbjct: 238 AMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGTGSFQPYGYGGGFQPPPPFPVVRLRGL 297

Query: 102 PFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYV 161
           PFNCTDIDI KFFAGL IVDVLLVNK+GRF GEAFVVFAG++QVEFALQRDRQNMGRRYV
Sbjct: 298 PFNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYV 357

Query: 162 EVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPP-RQKRISDKDQMEYTEILKLRGLPFS 221
           EVF CK+QDYYNAVA+EVNYEGIYDNDY+GSPPP R KR SDKDQMEYTEILK+RGLPFS
Sbjct: 358 EVFRCKKQDYYNAVASEVNYEGIYDNDYHGSPPPSRTKRFSDKDQMEYTEILKMRGLPFS 417

Query: 222 VTKSNIIEFFGEFDLAEERIHIASRSDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYV 281
            TK+ II+FF +F L E+R+HIA R DGKATGEAYVEF S ++AKRAM KDKMTIGSRYV
Sbjct: 418 ATKAQIIDFFKDFKLIEDRVHIACRPDGKATGEAYVEFVSPDEAKRAMCKDKMTIGSRYV 477

Query: 282 ELFPSTPNEARRAESRVTLLCAVYLKNEMRPSRQLLKFNYSRKGKSLKTSPDGFQAFKRW 341
           ELFPST +EARRAESR   +  + +KN +  +  LL F  + + + L  S   +Q     
Sbjct: 478 ELFPSTTDEARRAESRSRHIFNLAMKNTLLTT--LLVFKNTIR-EELIRSVHVYQIKDGK 537

Query: 342 ATENGNLCVILKPNDEEVQHPITIPSPEEPLLVHSLFSAWSFLLFEFVFFTEQNKSSFHM 401
             E     V  +           I   ++ L V  +   +   ++  +F       SFH 
Sbjct: 538 VREVEREFVFSESGSYGEMRSTPILRLQKKLCVAEVSEGYQNGVWLCIF-------SFHR 597

Query: 402 TSSGFSTEFPNVADPMHDSYLSCFP----------KLNDEK------------------- 461
                 +  PN+     +  L   P          KL  +K                   
Sbjct: 598 DHKPQFSSIPNLLLLSRNLKLRTIPTLLRDLRVIYKLEKDKDVLSDSTGEERQGNNKDSQ 657

Query: 462 -------FLHQDLNFLPCSSSMAVSKGPEIHQMKELCEPGGEFPVLAKKKRRATSEHIAG 521
                   L QDLNFLP    M  S+ P+ +++     P  +    A+KK+RA+S+ +A 
Sbjct: 658 PLRKVVPVLTQDLNFLPYEDDM--SESPD-NKLDVQALPDAD---SAEKKKRASSDRVAK 717

Query: 522 IALSDLAKYFDVPITEASRSLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAK 581
           I LS+L KYFD+PI EASR LNVGLTVLKRKCREFGI RWPHRKIKS+D LI ++QEEA 
Sbjct: 718 ITLSELVKYFDIPIVEASRRLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIHEIQEEAN 777

Query: 582 HREEDQK-ALMAVTKRQMMLQNERESIERTPFRELESETKRFRQDVFKRRHKARA---LT 619
           ++E D K A +A  +++ ML++E+E+IER PF +++SETK+ RQD+FKRRH+ARA   L 
Sbjct: 778 NQESDDKAAALAAIEKRRMLESEKENIERKPFMDIQSETKKLRQDIFKRRHRARAQKHLG 837

[Close]

BLAST of CmoCh03G006520 vs. ExPASy TrEMBL
Match: A0A444WWG1 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B10g100373 PE=3 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 1.8e-159
Identity = 337/619 (54.44%), Postives = 410/619 (66.24%), Query Frame = 0


Query: 42  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGY-GSFPPTHAFPVVRLRGL 101
           AMLGSGGVSDGYEVGSKRQRMME NPYFAVSS T  FQPYGY G F P   FPVVRLRGL
Sbjct: 238 AMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGTGSFQPYGYGGGFQPPPPFPVVRLRGL 297

Query: 102 PFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYV 161
           PFNCTDIDI KFFAGL IVDVLLVNK+GRF GEAFVVFAG++QVEFALQRDRQNMGRRYV
Sbjct: 298 PFNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYV 357

Query: 162 EVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPP-RQKRISDKDQMEYTEILKLRGLPFS 221
           EVF CK+QDYYNAVA+EVNYEGIYDNDY+GSPPP R KR SDKDQMEYTEILK+RGLPFS
Sbjct: 358 EVFRCKKQDYYNAVASEVNYEGIYDNDYHGSPPPSRTKRFSDKDQMEYTEILKMRGLPFS 417

Query: 222 VTKSNIIEFFGEFDLAEERIHIASRSDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYV 281
            TK+ II+FF +F L E+R+HIA R DGKATGEAYVEF S ++AKRAM KDKMTIGSRYV
Sbjct: 418 ATKAQIIDFFKDFKLIEDRVHIACRPDGKATGEAYVEFVSPDEAKRAMCKDKMTIGSRYV 477

Query: 282 ELFPSTPNEARRAESRVTLLCAVYLKNEMRPSRQLLKFNYSRKGKSLKTSPDGFQAFKRW 341
           ELFPST +EARRAESR   +  + +KN +  +  LL F  + + + L  S   +Q     
Sbjct: 478 ELFPSTTDEARRAESRSRHIFNLAMKNTLLTT--LLVFKNTIR-EELIRSVHVYQIKDGK 537

Query: 342 ATENGNLCVILKPNDEEVQHPITIPSPEEPLLVHSLFSAWSFLLFEFVFFTEQNKSSFHM 401
             E     V  +           I   ++ L V  +   +   ++  +F       SFH 
Sbjct: 538 VREVEREFVFSESGSYGEMRSTPILRLQKKLCVAEVSEGYQNGVWLCIF-------SFHR 597

Query: 402 TSSGFSTEFPNVADPMHDSYLSCFP----------KLNDEK------------------- 461
                 +  PN+     +  L   P          KL  +K                   
Sbjct: 598 DHKPQFSSIPNLLLLSRNLKLRTIPTLLRDLRVIYKLEKDKDVLSDSTGEERQGNNKDSQ 657

Query: 462 -------FLHQDLNFLPCSSSMAVSKGPEIHQMKELCEPGGEFPVLAKKKRRATSEHIAG 521
                   L QDLNFLP    M  S+ P+ +++     P  +    A+KK+RA+S+ +A 
Sbjct: 658 PLRKVVPVLTQDLNFLPYEDDM--SESPD-NKLDVQALPDAD---SAEKKKRASSDRVAK 717

Query: 522 IALSDLAKYFDVPITEASRSLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAK 581
           I LS+L KYFD+PI EASR LNVGLTVLKRKCREFGI RWPHRKIKS+D LI ++QEEA 
Sbjct: 718 ITLSELVKYFDIPIVEASRRLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIHEIQEEAN 777

Query: 582 HREEDQK-ALMAVTKRQMMLQNERESIERTPFRELESETKRFRQDVFKRRHKARA---LT 619
           ++E D K A +A  +++ ML++E+E+IER PF +++SETK+ RQD+FKRRH+ARA   L 
Sbjct: 778 NQESDDKAAALAAIEKRRMLESEKENIERKPFMDIQSETKKLRQDIFKRRHRARAQKHLG 837

[Close]

BLAST of CmoCh03G006520 vs. ExPASy TrEMBL
Match: A0A444WWK2 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B10g100373 PE=3 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 1.8e-159
Identity = 337/619 (54.44%), Postives = 410/619 (66.24%), Query Frame = 0


Query: 42  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGY-GSFPPTHAFPVVRLRGL 101
           AMLGSGGVSDGYEVGSKRQRMME NPYFAVSS T  FQPYGY G F P   FPVVRLRGL
Sbjct: 238 AMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGTGSFQPYGYGGGFQPPPPFPVVRLRGL 297

Query: 102 PFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYV 161
           PFNCTDIDI KFFAGL IVDVLLVNK+GRF GEAFVVFAG++QVEFALQRDRQNMGRRYV
Sbjct: 298 PFNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYV 357

Query: 162 EVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPP-RQKRISDKDQMEYTEILKLRGLPFS 221
           EVF CK+QDYYNAVA+EVNYEGIYDNDY+GSPPP R KR SDKDQMEYTEILK+RGLPFS
Sbjct: 358 EVFRCKKQDYYNAVASEVNYEGIYDNDYHGSPPPSRTKRFSDKDQMEYTEILKMRGLPFS 417

Query: 222 VTKSNIIEFFGEFDLAEERIHIASRSDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYV 281
            TK+ II+FF +F L E+R+HIA R DGKATGEAYVEF S ++AKRAM KDKMTIGSRYV
Sbjct: 418 ATKAQIIDFFKDFKLIEDRVHIACRPDGKATGEAYVEFVSPDEAKRAMCKDKMTIGSRYV 477

Query: 282 ELFPSTPNEARRAESRVTLLCAVYLKNEMRPSRQLLKFNYSRKGKSLKTSPDGFQAFKRW 341
           ELFPST +EARRAESR   +  + +KN +  +  LL F  + + + L  S   +Q     
Sbjct: 478 ELFPSTTDEARRAESRSRHIFNLAMKNTLLTT--LLVFKNTIR-EELIRSVHVYQIKDGK 537

Query: 342 ATENGNLCVILKPNDEEVQHPITIPSPEEPLLVHSLFSAWSFLLFEFVFFTEQNKSSFHM 401
             E     V  +           I   ++ L V  +   +   ++  +F       SFH 
Sbjct: 538 VREVEREFVFSESGSYGEMRSTPILRLQKKLCVAEVSEGYQNGVWLCIF-------SFHR 597

Query: 402 TSSGFSTEFPNVADPMHDSYLSCFP----------KLNDEK------------------- 461
                 +  PN+     +  L   P          KL  +K                   
Sbjct: 598 DHKPQFSSIPNLLLLSRNLKLRTIPTLLRDLRVIYKLEKDKDVLSDSTGEERQGNNKDSQ 657

Query: 462 -------FLHQDLNFLPCSSSMAVSKGPEIHQMKELCEPGGEFPVLAKKKRRATSEHIAG 521
                   L QDLNFLP    M  S+ P+ +++     P  +    A+KK+RA+S+ +A 
Sbjct: 658 PLRKVVPVLTQDLNFLPYEDDM--SESPD-NKLDVQALPDAD---SAEKKKRASSDRVAK 717

Query: 522 IALSDLAKYFDVPITEASRSLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAK 581
           I LS+L KYFD+PI EASR LNVGLTVLKRKCREFGI RWPHRKIKS+D LI ++QEEA 
Sbjct: 718 ITLSELVKYFDIPIVEASRRLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIHEIQEEAN 777

Query: 582 HREEDQK-ALMAVTKRQMMLQNERESIERTPFRELESETKRFRQDVFKRRHKARA---LT 619
           ++E D K A +A  +++ ML++E+E+IER PF +++SETK+ RQD+FKRRH+ARA   L 
Sbjct: 778 NQESDDKAAALAAIEKRRMLESEKENIERKPFMDIQSETKKLRQDIFKRRHRARAQKHLG 837

[Close]

BLAST of CmoCh03G006520 vs. ExPASy TrEMBL
Match: A0A6J1GEF2 (heterogeneous nuclear ribonucleoprotein H-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453406 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 3.8e-141
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 42  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLP 101
           AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLP
Sbjct: 7   AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLP 66

Query: 102 FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYVE 161
           FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYVE
Sbjct: 67  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYVE 126

Query: 162 VFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVT 221
           VFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVT
Sbjct: 127 VFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVT 186

Query: 222 KSNIIEFFGEFDLAEERIHIASRSDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVEL 281
           KSNIIEFFGEFDLAEERIHIASRSDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVEL
Sbjct: 187 KSNIIEFFGEFDLAEERIHIASRSDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVEL 246

Query: 282 FPSTPNEARRAESR 296
           FPSTPNEARRAESR
Sbjct: 247 FPSTPNEARRAESR 260

[Close]

BLAST of CmoCh03G006520 vs. NCBI nr
Match: KAG6603861.1 (hypothetical protein SDJN03_04470, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 775.0 bits (2000), Expect = 5.0e-220
Identity = 417/557 (74.87%), Postives = 419/557 (75.22%), Query Frame = 0


Query: 42  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLP 101
           AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLP
Sbjct: 292 AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRLRGLP 351

Query: 102 FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYVE 161
           FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYVE
Sbjct: 352 FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYVE 411

Query: 162 VFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVT 221
           VFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVT
Sbjct: 412 VFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPPRQKRISDKDQMEYTEILKLRGLPFSVT 471

Query: 222 KSNIIEFFGEFDLAEERIHIASRSDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVEL 281
           KSNIIEFFGEFDLAEERIHIASR DGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVEL
Sbjct: 472 KSNIIEFFGEFDLAEERIHIASRPDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYVEL 531

Query: 282 FPSTPNEARRAESRVTLLCAVYLKNEMRPSRQLLKFNYSRKGKSLKTSPDGFQAFKRWAT 341
           FPSTPNEARRAESR  ++                                          
Sbjct: 532 FPSTPNEARRAESRAFVVS----------------------------------------- 591

Query: 342 ENGNLCVILKPNDEEVQHPITIPSPEEPLLVHSLFSAWSFLLFEFVFFTEQNKSSFHMTS 401
                                                                    MTS
Sbjct: 592 --------------------------------------------------------QMTS 651

Query: 402 SGFSTEFPNVADPMHDSYLSCFPKLNDEKFLHQDLNFLPCSSSMAVSKGPEIHQMKELCE 461
           SGFSTEFPNVADPMHDSYLSCFPKLNDEKFLHQDLNFLPCSSSMAVSKGPEIHQMKELCE
Sbjct: 652 SGFSTEFPNVADPMHDSYLSCFPKLNDEKFLHQDLNFLPCSSSMAVSKGPEIHQMKELCE 711

Query: 462 PGGEFPVLAKKKRRATSEHIAGIALSDLAKYFDVPITEASRSLNVGLTVLKRKCREFGIH 521
           P                                    EASRSLNVGLTVLKRKCREFGIH
Sbjct: 712 P------------------------------------EASRSLNVGLTVLKRKCREFGIH 715

Query: 522 RWPHRKIKSIDGLIRDLQEEAKHREEDQKALMAVTKRQMMLQNERESIERTPFRELESET 581
           RWPHRKIKSIDGLIRDLQEEAKHREEDQKALMAVTKRQMMLQNERESIERTPFRELESET
Sbjct: 772 RWPHRKIKSIDGLIRDLQEEAKHREEDQKALMAVTKRQMMLQNERESIERTPFRELESET 715

Query: 582 KRFRQDVFKRRHKARAL 599
           KRFRQDVFKRRHKARAL
Sbjct: 832 KRFRQDVFKRRHKARAL 715

[Close]

BLAST of CmoCh03G006520 vs. NCBI nr
Match: RYQ81764.1 (hypothetical protein Ahy_B10g100373 isoform A [Arachis hypogaea])

HSP 1 Score: 572.8 bits (1475), Expect = 3.7e-159
Identity = 337/619 (54.44%), Postives = 410/619 (66.24%), Query Frame = 0


Query: 42  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGY-GSFPPTHAFPVVRLRGL 101
           AMLGSGGVSDGYEVGSKRQRMME NPYFAVSS T  FQPYGY G F P   FPVVRLRGL
Sbjct: 238 AMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGTGSFQPYGYGGGFQPPPPFPVVRLRGL 297

Query: 102 PFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYV 161
           PFNCTDIDI KFFAGL IVDVLLVNK+GRF GEAFVVFAG++QVEFALQRDRQNMGRRYV
Sbjct: 298 PFNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYV 357

Query: 162 EVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPP-RQKRISDKDQMEYTEILKLRGLPFS 221
           EVF CK+QDYYNAVA+EVNYEGIYDNDY+GSPPP R KR SDKDQMEYTEILK+RGLPFS
Sbjct: 358 EVFRCKKQDYYNAVASEVNYEGIYDNDYHGSPPPSRTKRFSDKDQMEYTEILKMRGLPFS 417

Query: 222 VTKSNIIEFFGEFDLAEERIHIASRSDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYV 281
            TK+ II+FF +F L E+R+HIA R DGKATGEAYVEF S ++AKRAM KDKMTIGSRYV
Sbjct: 418 ATKAQIIDFFKDFKLIEDRVHIACRPDGKATGEAYVEFVSPDEAKRAMCKDKMTIGSRYV 477

Query: 282 ELFPSTPNEARRAESRVTLLCAVYLKNEMRPSRQLLKFNYSRKGKSLKTSPDGFQAFKRW 341
           ELFPST +EARRAESR   +  + +KN +  +  LL F  + + + L  S   +Q     
Sbjct: 478 ELFPSTTDEARRAESRSRHIFNLAMKNTLLTT--LLVFKNTIR-EELIRSVHVYQIKDGK 537

Query: 342 ATENGNLCVILKPNDEEVQHPITIPSPEEPLLVHSLFSAWSFLLFEFVFFTEQNKSSFHM 401
             E     V  +           I   ++ L V  +   +   ++  +F       SFH 
Sbjct: 538 VREVEREFVFSESGSYGEMRSTPILRLQKKLCVAEVSEGYQNGVWLCIF-------SFHR 597

Query: 402 TSSGFSTEFPNVADPMHDSYLSCFP----------KLNDEK------------------- 461
                 +  PN+     +  L   P          KL  +K                   
Sbjct: 598 DHKPQFSSIPNLLLLSRNLKLRTIPTLLRDLRVIYKLEKDKDVLSDSTGEERQGNNKDSQ 657

Query: 462 -------FLHQDLNFLPCSSSMAVSKGPEIHQMKELCEPGGEFPVLAKKKRRATSEHIAG 521
                   L QDLNFLP    M  S+ P+ +++     P  +    A+KK+RA+S+ +A 
Sbjct: 658 PLRKVVPVLTQDLNFLPYEDDM--SESPD-NKLDVQALPDAD---SAEKKKRASSDRVAK 717

Query: 522 IALSDLAKYFDVPITEASRSLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAK 581
           I LS+L KYFD+PI EASR LNVGLTVLKRKCREFGI RWPHRKIKS+D LI ++QEEA 
Sbjct: 718 ITLSELVKYFDIPIVEASRRLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIHEIQEEAN 777

Query: 582 HREEDQK-ALMAVTKRQMMLQNERESIERTPFRELESETKRFRQDVFKRRHKARA---LT 619
           ++E D K A +A  +++ ML++E+E+IER PF +++SETK+ RQD+FKRRH+ARA   L 
Sbjct: 778 NQESDDKAAALAAIEKRRMLESEKENIERKPFMDIQSETKKLRQDIFKRRHRARAQKHLG 837

[Close]

BLAST of CmoCh03G006520 vs. NCBI nr
Match: RYQ81765.1 (hypothetical protein Ahy_B10g100373 isoform C [Arachis hypogaea])

HSP 1 Score: 572.8 bits (1475), Expect = 3.7e-159
Identity = 337/619 (54.44%), Postives = 410/619 (66.24%), Query Frame = 0


Query: 42  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGY-GSFPPTHAFPVVRLRGL 101
           AMLGSGGVSDGYEVGSKRQRMME NPYFAVSS T  FQPYGY G F P   FPVVRLRGL
Sbjct: 238 AMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGTGSFQPYGYGGGFQPPPPFPVVRLRGL 297

Query: 102 PFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYV 161
           PFNCTDIDI KFFAGL IVDVLLVNK+GRF GEAFVVFAG++QVEFALQRDRQNMGRRYV
Sbjct: 298 PFNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYV 357

Query: 162 EVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPP-RQKRISDKDQMEYTEILKLRGLPFS 221
           EVF CK+QDYYNAVA+EVNYEGIYDNDY+GSPPP R KR SDKDQMEYTEILK+RGLPFS
Sbjct: 358 EVFRCKKQDYYNAVASEVNYEGIYDNDYHGSPPPSRTKRFSDKDQMEYTEILKMRGLPFS 417

Query: 222 VTKSNIIEFFGEFDLAEERIHIASRSDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYV 281
            TK+ II+FF +F L E+R+HIA R DGKATGEAYVEF S ++AKRAM KDKMTIGSRYV
Sbjct: 418 ATKAQIIDFFKDFKLIEDRVHIACRPDGKATGEAYVEFVSPDEAKRAMCKDKMTIGSRYV 477

Query: 282 ELFPSTPNEARRAESRVTLLCAVYLKNEMRPSRQLLKFNYSRKGKSLKTSPDGFQAFKRW 341
           ELFPST +EARRAESR   +  + +KN +  +  LL F  + + + L  S   +Q     
Sbjct: 478 ELFPSTTDEARRAESRSRHIFNLAMKNTLLTT--LLVFKNTIR-EELIRSVHVYQIKDGK 537

Query: 342 ATENGNLCVILKPNDEEVQHPITIPSPEEPLLVHSLFSAWSFLLFEFVFFTEQNKSSFHM 401
             E     V  +           I   ++ L V  +   +   ++  +F       SFH 
Sbjct: 538 VREVEREFVFSESGSYGEMRSTPILRLQKKLCVAEVSEGYQNGVWLCIF-------SFHR 597

Query: 402 TSSGFSTEFPNVADPMHDSYLSCFP----------KLNDEK------------------- 461
                 +  PN+     +  L   P          KL  +K                   
Sbjct: 598 DHKPQFSSIPNLLLLSRNLKLRTIPTLLRDLRVIYKLEKDKDVLSDSTGEERQGNNKDSQ 657

Query: 462 -------FLHQDLNFLPCSSSMAVSKGPEIHQMKELCEPGGEFPVLAKKKRRATSEHIAG 521
                   L QDLNFLP    M  S+ P+ +++     P  +    A+KK+RA+S+ +A 
Sbjct: 658 PLRKVVPVLTQDLNFLPYEDDM--SESPD-NKLDVQALPDAD---SAEKKKRASSDRVAK 717

Query: 522 IALSDLAKYFDVPITEASRSLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAK 581
           I LS+L KYFD+PI EASR LNVGLTVLKRKCREFGI RWPHRKIKS+D LI ++QEEA 
Sbjct: 718 ITLSELVKYFDIPIVEASRRLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIHEIQEEAN 777

Query: 582 HREEDQK-ALMAVTKRQMMLQNERESIERTPFRELESETKRFRQDVFKRRHKARA---LT 619
           ++E D K A +A  +++ ML++E+E+IER PF +++SETK+ RQD+FKRRH+ARA   L 
Sbjct: 778 NQESDDKAAALAAIEKRRMLESEKENIERKPFMDIQSETKKLRQDIFKRRHRARAQKHLG 837

[Close]

BLAST of CmoCh03G006520 vs. NCBI nr
Match: RYQ81766.1 (hypothetical protein Ahy_B10g100373 isoform B [Arachis hypogaea])

HSP 1 Score: 572.8 bits (1475), Expect = 3.7e-159
Identity = 337/619 (54.44%), Postives = 410/619 (66.24%), Query Frame = 0


Query: 42  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGY-GSFPPTHAFPVVRLRGL 101
           AMLGSGGVSDGYEVGSKRQRMME NPYFAVSS T  FQPYGY G F P   FPVVRLRGL
Sbjct: 238 AMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGTGSFQPYGYGGGFQPPPPFPVVRLRGL 297

Query: 102 PFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYV 161
           PFNCTDIDI KFFAGL IVDVLLVNK+GRF GEAFVVFAG++QVEFALQRDRQNMGRRYV
Sbjct: 298 PFNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYV 357

Query: 162 EVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPP-RQKRISDKDQMEYTEILKLRGLPFS 221
           EVF CK+QDYYNAVA+EVNYEGIYDNDY+GSPPP R KR SDKDQMEYTEILK+RGLPFS
Sbjct: 358 EVFRCKKQDYYNAVASEVNYEGIYDNDYHGSPPPSRTKRFSDKDQMEYTEILKMRGLPFS 417

Query: 222 VTKSNIIEFFGEFDLAEERIHIASRSDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYV 281
            TK+ II+FF +F L E+R+HIA R DGKATGEAYVEF S ++AKRAM KDKMTIGSRYV
Sbjct: 418 ATKAQIIDFFKDFKLIEDRVHIACRPDGKATGEAYVEFVSPDEAKRAMCKDKMTIGSRYV 477

Query: 282 ELFPSTPNEARRAESRVTLLCAVYLKNEMRPSRQLLKFNYSRKGKSLKTSPDGFQAFKRW 341
           ELFPST +EARRAESR   +  + +KN +  +  LL F  + + + L  S   +Q     
Sbjct: 478 ELFPSTTDEARRAESRSRHIFNLAMKNTLLTT--LLVFKNTIR-EELIRSVHVYQIKDGK 537

Query: 342 ATENGNLCVILKPNDEEVQHPITIPSPEEPLLVHSLFSAWSFLLFEFVFFTEQNKSSFHM 401
             E     V  +           I   ++ L V  +   +   ++  +F       SFH 
Sbjct: 538 VREVEREFVFSESGSYGEMRSTPILRLQKKLCVAEVSEGYQNGVWLCIF-------SFHR 597

Query: 402 TSSGFSTEFPNVADPMHDSYLSCFP----------KLNDEK------------------- 461
                 +  PN+     +  L   P          KL  +K                   
Sbjct: 598 DHKPQFSSIPNLLLLSRNLKLRTIPTLLRDLRVIYKLEKDKDVLSDSTGEERQGNNKDSQ 657

Query: 462 -------FLHQDLNFLPCSSSMAVSKGPEIHQMKELCEPGGEFPVLAKKKRRATSEHIAG 521
                   L QDLNFLP    M  S+ P+ +++     P  +    A+KK+RA+S+ +A 
Sbjct: 658 PLRKVVPVLTQDLNFLPYEDDM--SESPD-NKLDVQALPDAD---SAEKKKRASSDRVAK 717

Query: 522 IALSDLAKYFDVPITEASRSLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAK 581
           I LS+L KYFD+PI EASR LNVGLTVLKRKCREFGI RWPHRKIKS+D LI ++QEEA 
Sbjct: 718 ITLSELVKYFDIPIVEASRRLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIHEIQEEAN 777

Query: 582 HREEDQK-ALMAVTKRQMMLQNERESIERTPFRELESETKRFRQDVFKRRHKARA---LT 619
           ++E D K A +A  +++ ML++E+E+IER PF +++SETK+ RQD+FKRRH+ARA   L 
Sbjct: 778 NQESDDKAAALAAIEKRRMLESEKENIERKPFMDIQSETKKLRQDIFKRRHRARAQKHLG 837

[Close]

BLAST of CmoCh03G006520 vs. NCBI nr
Match: RYQ81767.1 (hypothetical protein Ahy_B10g100373 isoform D [Arachis hypogaea])

HSP 1 Score: 572.8 bits (1475), Expect = 3.7e-159
Identity = 337/619 (54.44%), Postives = 410/619 (66.24%), Query Frame = 0


Query: 42  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGY-GSFPPTHAFPVVRLRGL 101
           AMLGSGGVSDGYEVGSKRQRMME NPYFAVSS T  FQPYGY G F P   FPVVRLRGL
Sbjct: 238 AMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGTGSFQPYGYGGGFQPPPPFPVVRLRGL 297

Query: 102 PFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYV 161
           PFNCTDIDI KFFAGL IVDVLLVNK+GRF GEAFVVFAG++QVEFALQRDRQNMGRRYV
Sbjct: 298 PFNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFAGAMQVEFALQRDRQNMGRRYV 357

Query: 162 EVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPP-RQKRISDKDQMEYTEILKLRGLPFS 221
           EVF CK+QDYYNAVA+EVNYEGIYDNDY+GSPPP R KR SDKDQMEYTEILK+RGLPFS
Sbjct: 358 EVFRCKKQDYYNAVASEVNYEGIYDNDYHGSPPPSRTKRFSDKDQMEYTEILKMRGLPFS 417

Query: 222 VTKSNIIEFFGEFDLAEERIHIASRSDGKATGEAYVEFASAEDAKRAMSKDKMTIGSRYV 281
            TK+ II+FF +F L E+R+HIA R DGKATGEAYVEF S ++AKRAM KDKMTIGSRYV
Sbjct: 418 ATKAQIIDFFKDFKLIEDRVHIACRPDGKATGEAYVEFVSPDEAKRAMCKDKMTIGSRYV 477

Query: 282 ELFPSTPNEARRAESRVTLLCAVYLKNEMRPSRQLLKFNYSRKGKSLKTSPDGFQAFKRW 341
           ELFPST +EARRAESR   +  + +KN +  +  LL F  + + + L  S   +Q     
Sbjct: 478 ELFPSTTDEARRAESRSRHIFNLAMKNTLLTT--LLVFKNTIR-EELIRSVHVYQIKDGK 537

Query: 342 ATENGNLCVILKPNDEEVQHPITIPSPEEPLLVHSLFSAWSFLLFEFVFFTEQNKSSFHM 401
             E     V  +           I   ++ L V  +   +   ++  +F       SFH 
Sbjct: 538 VREVEREFVFSESGSYGEMRSTPILRLQKKLCVAEVSEGYQNGVWLCIF-------SFHR 597

Query: 402 TSSGFSTEFPNVADPMHDSYLSCFP----------KLNDEK------------------- 461
                 +  PN+     +  L   P          KL  +K                   
Sbjct: 598 DHKPQFSSIPNLLLLSRNLKLRTIPTLLRDLRVIYKLEKDKDVLSDSTGEERQGNNKDSQ 657

Query: 462 -------FLHQDLNFLPCSSSMAVSKGPEIHQMKELCEPGGEFPVLAKKKRRATSEHIAG 521
                   L QDLNFLP    M  S+ P+ +++     P  +    A+KK+RA+S+ +A 
Sbjct: 658 PLRKVVPVLTQDLNFLPYEDDM--SESPD-NKLDVQALPDAD---SAEKKKRASSDRVAK 717

Query: 522 IALSDLAKYFDVPITEASRSLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAK 581
           I LS+L KYFD+PI EASR LNVGLTVLKRKCREFGI RWPHRKIKS+D LI ++QEEA 
Sbjct: 718 ITLSELVKYFDIPIVEASRRLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIHEIQEEAN 777

Query: 582 HREEDQK-ALMAVTKRQMMLQNERESIERTPFRELESETKRFRQDVFKRRHKARA---LT 619
           ++E D K A +A  +++ ML++E+E+IER PF +++SETK+ RQD+FKRRH+ARA   L 
Sbjct: 778 NQESDDKAAALAAIEKRRMLESEKENIERKPFMDIQSETKKLRQDIFKRRHRARAQKHLG 837

[Close]

BLAST of CmoCh03G006520 vs. TAIR 10
Match: AT5G66010.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 333.2 bits (853), Expect = 4.7e-91
Identity = 170/262 (64.89%), Postives = 202/262 (77.10%), Query Frame = 0


Query: 38  GNGMAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTHAFPVVRL 97
           G+  AM GSG    GYEVGSKRQRMM+ NPY AV +    F P+GY        FPVVRL
Sbjct: 3   GSRGAMFGSG----GYEVGSKRQRMMQSNPYLAVGTGPTSFPPFGYAG-----GFPVVRL 62

Query: 98  RGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGR 157
           RGLPFNC DIDIF+FFAGL+IVDVLLV+KNG+F GEAFVVFAG +QVE ALQRDR NMGR
Sbjct: 63  RGLPFNCADIDIFEFFAGLNIVDVLLVSKNGKFSGEAFVVFAGPMQVEIALQRDRHNMGR 122

Query: 158 RYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPP----RQKRISDKDQMEYTEILKL 217
           RYVEVF C +QDYYNAVAAE   EG Y+ +   SPPP    R KR S+K+++EYTE+LK+
Sbjct: 123 RYVEVFRCSKQDYYNAVAAE---EGAYEYEVRASPPPTGPSRAKRFSEKEKLEYTEVLKM 182

Query: 218 RGLPFSVTKSNIIEFFGEFDLAEERIHIASRSDGKATGEAYVEFASAEDAKRAMSKDKMT 277
           RGLP+SV K  IIEFF  + + + R+ +  R DGKATGEA+VEF + E+A+RAM+KDKM+
Sbjct: 183 RGLPYSVNKPQIIEFFSGYKVIQGRVQVVCRPDGKATGEAFVEFETGEEARRAMAKDKMS 242

Query: 278 IGSRYVELFPSTPNEARRAESR 296
           IGSRYVELFP+T  EARRAE+R
Sbjct: 243 IGSRYVELFPTTREEARRAEAR 252

[Close]

BLAST of CmoCh03G006520 vs. TAIR 10
Match: AT3G20890.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 236.1 bits (601), Expect = 7.7e-62
Identity = 130/286 (45.45%), Postives = 179/286 (62.59%), Query Frame = 0


Query: 45  GSGGVSDGYEVGSKRQRMME---PNPYFAV-SSSTAGFQPYGYGSFPPTHAFPVVRLRGL 104
           G G   DG E+G KRQRM++   P P++    SS   + PYG+ + PP   FP VRLRGL
Sbjct: 5   GYGDGPDGREMGPKRQRMIDQGPPGPFYGPHPSSGFMYNPYGFVAPPPPPPFPAVRLRGL 64

Query: 105 PFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSLQVEFALQRDRQNMGRRYV 164
           PF+C ++D+ +FF GLD+VDVL V++N +  GEAF V    LQV+FALQ++RQNMGRRYV
Sbjct: 65  PFDCAELDVVEFFHGLDVVDVLFVHRNNKVTGEAFCVLGYPLQVDFALQKNRQNMGRRYV 124

Query: 165 EVFSCKRQDYYNAVAAEVNYEGIY--------------------------DNDYNGSPPP 224
           EVF   +Q+YY A+A EV    ++                               GS P 
Sbjct: 125 EVFRSTKQEYYKAIANEVAESRVHGMASGGGGGLGGGNGSGGGGGGGGGGGRISGGSSPR 184

Query: 225 R---QKRISD--KDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIASRSDGKA 284
           R   + R SD  K+ +E+T IL+LRGLPFS  K +I++FF +F+L+E+ +H+    +G+ 
Sbjct: 185 RHVQRARSSDDGKEDIEHTGILRLRGLPFSAGKEDILDFFKDFELSEDFVHVTVNGEGRP 244

Query: 285 TGEAYVEFASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR 296
           TGEA+VEF +AED++ AM KD+ T+GSRY+ELFPS+  E   A SR
Sbjct: 245 TGEAFVEFRNAEDSRAAMVKDRKTLGSRYIELFPSSVEELEEALSR 290

[Close]

BLAST of CmoCh03G006520 vs. TAIR 10
Match: AT5G66010.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-51
Identity = 100/158 (63.29%), Postives = 124/158 (78.48%), Query Frame = 0


Query: 142 LQVEFALQRDRQNMGRRYVEVFSCKRQDYYNAVAAEVNYEGIYDNDYNGSPPP----RQK 201
           +QVE ALQRDR NMGRRYVEVF C +QDYYNAVAAE   EG Y+ +   SPPP    R K
Sbjct: 1   MQVEIALQRDRHNMGRRYVEVFRCSKQDYYNAVAAE---EGAYEYEVRASPPPTGPSRAK 60

Query: 202 RISDKDQMEYTEILKLRGLPFSVTKSNIIEFFGEFDLAEERIHIASRSDGKATGEAYVEF 261
           R S+K+++EYTE+LK+RGLP+SV K  IIEFF  + + + R+ +  R DGKATGEA+VEF
Sbjct: 61  RFSEKEKLEYTEVLKMRGLPYSVNKPQIIEFFSGYKVIQGRVQVVCRPDGKATGEAFVEF 120

Query: 262 ASAEDAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR 296
            + E+A+RAM+KDKM+IGSRYVELFP+T  EARRAE+R
Sbjct: 121 ETGEEARRAMAKDKMSIGSRYVELFPTTREEARRAEAR 155

[Close]

BLAST of CmoCh03G006520 vs. TAIR 10
Match: AT4G35590.1 (RWP-RK domain-containing protein )

HSP 1 Score: 154.8 bits (390), Expect = 2.3e-37
Identity = 89/172 (51.74%), Postives = 120/172 (69.77%), Query Frame = 0


Query: 432 LHQDLNFLPCS---SSMAVSKGPEIHQMK----ELCEPGGEFPVLAKKKRRATSEHIAGI 491
           L QDLN LP S   S  +V++  E  + +    E  E   +  +L KKK+R  S H+A +
Sbjct: 184 LKQDLNCLPDSETESEESVNEKTEHSEFENDKTEQSESDAKTEIL-KKKKRTPSRHVAEL 243

Query: 492 ALSDLAKYFDVPITEASRSLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEA-K 551
           +L +L+KYFD+ I EASR+L VGLTVLK+KCREFGI RWPHRKIKS+D LI DLQ EA K
Sbjct: 244 SLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAEK 303

Query: 552 HREEDQKALMAVTKRQMMLQNERESIERTPFRELESETKRFRQDVFKRRHKA 596
            +E+++ A MAV K+Q  L+ E+ +I + PF E+  ETK+FRQ+ FK+RH+A
Sbjct: 304 QQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFRQENFKKRHRA 354

[Close]

BLAST of CmoCh03G006520 vs. TAIR 10
Match: AT5G53040.1 (RWP-RK domain-containing protein )

HSP 1 Score: 98.2 bits (243), Expect = 2.5e-20
Identity = 65/184 (35.33%), Postives = 98/184 (53.26%), Query Frame = 0


Query: 416 HDSYLSCFPKLNDEKFLHQDLNFL---PCSSSMAVSKGPEIHQMKELCEPGGEFPVLAKK 475
           ++S+   F  +  +  +  D++ L   P  SS + S  P   Q   L        V  KK
Sbjct: 77  YNSFEDFFENIEVDNTIPSDIHLLTQEPYFSSDSSSSSPLAIQNDGLISNVKVEKVTVKK 136

Query: 476 KRRATSEHIAGIALSDLAKYFDVPITEASRSLNVGLTVLKRKCREFGIHRWPHRKIKSID 535
           KR    +    + +S++ ++FD PI +A++ LNVGLTVLK++CRE GI+RWPHRK+KS++
Sbjct: 137 KRNLKKKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLN 196

Query: 536 GLIRDLQEEAKHREEDQKALMAVTKRQMMLQNERESIERTPFRELESETKRFRQDVFKRR 595
            LI++L+      EE+ K           L+  R  IE+ P  EL   TK+ RQ  FK  
Sbjct: 197 SLIKNLKNVG--MEEEVK----------NLEEHRFLIEQEPDAELSDGTKKLRQACFKAN 248

Query: 596 HKAR 597
           +K R
Sbjct: 257 YKRR 248

The following BLAST results are available for this feature:

BLAST of CmoCh03G006520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81791	3.2e-36	51.74	Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1	[more]
Q3US41	5.6e-25	35.10	Epithelial splicing regulatory protein 1 OS=Mus musculus OX=10090 GN=Esrp1 PE=1 ...	[more]
Q6NXG1	7.4e-25	35.10	Epithelial splicing regulatory protein 1 OS=Homo sapiens OX=9606 GN=ESRP1 PE=1 S...	[more]
B2RYD2	7.4e-25	35.10	Epithelial splicing regulatory protein 1 OS=Rattus norvegicus OX=10116 GN=Esrp1 ...	[more]
Q5E9J1	1.6e-24	36.14	Heterogeneous nuclear ribonucleoprotein F OS=Bos taurus OX=9913 GN=HNRNPF PE=2 S...	[more]

BLAST of CmoCh03G006520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A444WWB9	1.8e-159	54.44	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B10g100373 PE=3 SV=1	[more]
A0A444WWD1	1.8e-159	54.44	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B10g100373 PE=3 SV=1	[more]
A0A444WWG1	1.8e-159	54.44	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B10g100373 PE=3 SV=1	[more]
A0A444WWK2	1.8e-159	54.44	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B10g100373 PE=3 SV=1	[more]
A0A6J1GEF2	3.8e-141	100.00	heterogeneous nuclear ribonucleoprotein H-like isoform X1 OS=Cucurbita moschata ...	[more]

BLAST of CmoCh03G006520 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603861.1	5.0e-220	74.87	hypothetical protein SDJN03_04470, partial [Cucurbita argyrosperma subsp. sorori...	[more]
RYQ81764.1	3.7e-159	54.44	hypothetical protein Ahy_B10g100373 isoform A [Arachis hypogaea]	[more]
RYQ81765.1	3.7e-159	54.44	hypothetical protein Ahy_B10g100373 isoform C [Arachis hypogaea]	[more]
RYQ81766.1	3.7e-159	54.44	hypothetical protein Ahy_B10g100373 isoform B [Arachis hypogaea]	[more]
RYQ81767.1	3.7e-159	54.44	hypothetical protein Ahy_B10g100373 isoform D [Arachis hypogaea]	[more]

BLAST of CmoCh03G006520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66010.1	4.7e-91	64.89	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G20890.1	7.7e-62	45.45	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G66010.2	1.6e-51	63.29	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G35590.1	2.3e-37	51.74	RWP-RK domain-containing protein	[more]
AT5G53040.1	2.5e-20	35.33	RWP-RK domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 210..282 e-value: 1.3E-8 score: 44.6 coord: 94..163 e-value: 2.5E-5 score: 33.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 96..158 e-value: 2.1E-5 score: 24.2 coord: 213..279 e-value: 8.2E-9 score: 35.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 209..286 score: 10.496632
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 91..176 e-value: 6.4E-22 score: 79.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 194..297 e-value: 1.1E-28 score: 101.4
IPR003035	RWP-RK domain	PFAM	PF02042	RWP-RK	coord: 484..531 e-value: 1.3E-21 score: 76.3
IPR003035	RWP-RK domain	PROSITE	PS51519	RWP_RK	coord: 466..551 score: 18.667007
None	No IPR available	PANTHER	PTHR13976:SF71	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 42..296
None	No IPR available	PANTHER	PTHR13976	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED	coord: 42..296
None	No IPR available	CDD	cd12254	RRM_hnRNPH_ESRPs_RBM12_like	coord: 210..282 e-value: 4.17896E-28 score: 105.332
None	No IPR available	CDD	cd12254	RRM_hnRNPH_ESRPs_RBM12_like	coord: 94..163 e-value: 5.94729E-24 score: 93.7759
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 87..172
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 208..294

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G006520.1	CmoCh03G006520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding