Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCGCCAAAGCACCAAGCGACCAAGAGAATCATCAGAGGAACAATCTTCGCTGCCGGAGATCGGTAATGGAAAGAAGCAGCGCCTCCACGGCGGCAGTGACGACGCCAAGGAACCTCTTCCTAGAACATTCTTTGATTTCGATCTGTCGTTCGGCGTCTTCGATTTCCCCTGGTTGAAGGAGAGCCTGATTTATTGCGAATCCGAGGACTGGAAATTGGACGATGTTTTCTTCACCTCCTTTTACAATGGACTATCCACCGCCGATGCTACTACGATTGGGACGGAGTTGTCGTCGGGGCAATTGGTTTGGAGTAATCTGCCGGATCCTTGGGAGGCGGAATACGAGGCACAAGTGCCGCCGACGACGCTGGACGACGGCGGAGGAGGACAGGCAGGGGAGGAGATGGATTGTATCTGGAGCTCTCTGCTAAATCAACCGCTTCAACAAGGGAGTAGAGCGTTGTAG
mRNA sequence
ATGGACCGCCAAAGCACCAAGCGACCAAGAGAATCATCAGAGGAACAATCTTCGCTGCCGGAGATCGGTAATGGAAAGAAGCAGCGCCTCCACGGCGGCAGTGACGACGCCAAGGAACCTCTTCCTAGAACATTCTTTGATTTCGATCTGTCGTTCGGCGTCTTCGATTTCCCCTGGTTGAAGGAGAGCCTGATTTATTGCGAATCCGAGGACTGGAAATTGGACGATGTTTTCTTCACCTCCTTTTACAATGGACTATCCACCGCCGATGCTACTACGATTGGGACGGAGTTGTCGTCGGGGCAATTGGTTTGGAGTAATCTGCCGGATCCTTGGGAGGCGGAATACGAGGCACAAGTGCCGCCGACGACGCTGGACGACGGCGGAGGAGGACAGGCAGGGGAGGAGATGGATTGTATCTGGAGCTCTCTGCTAAATCAACCGCTTCAACAAGGGAGTAGAGCGTTGTAG
Coding sequence (CDS)
ATGGACCGCCAAAGCACCAAGCGACCAAGAGAATCATCAGAGGAACAATCTTCGCTGCCGGAGATCGGTAATGGAAAGAAGCAGCGCCTCCACGGCGGCAGTGACGACGCCAAGGAACCTCTTCCTAGAACATTCTTTGATTTCGATCTGTCGTTCGGCGTCTTCGATTTCCCCTGGTTGAAGGAGAGCCTGATTTATTGCGAATCCGAGGACTGGAAATTGGACGATGTTTTCTTCACCTCCTTTTACAATGGACTATCCACCGCCGATGCTACTACGATTGGGACGGAGTTGTCGTCGGGGCAATTGGTTTGGAGTAATCTGCCGGATCCTTGGGAGGCGGAATACGAGGCACAAGTGCCGCCGACGACGCTGGACGACGGCGGAGGAGGACAGGCAGGGGAGGAGATGGATTGTATCTGGAGCTCTCTGCTAAATCAACCGCTTCAACAAGGGAGTAGAGCGTTGTAG
Protein sequence
MDRQSTKRPRESSEEQSSLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFDLSFGVFDFPWLKESLIYCESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVWSNLPDPWEAEYEAQVPPTTLDDGGGGQAGEEMDCIWSSLLNQPLQQGSRAL
Homology
BLAST of CmoCh03G006350 vs. ExPASy TrEMBL
Match:
A0A6J1IJM6 (uncharacterized protein LOC111478029 OS=Cucurbita maxima OX=3661 GN=LOC111478029 PE=4 SV=1)
HSP 1 Score: 307.0 bits (785), Expect = 4.5e-80
Identity = 149/156 (95.51%), Postives = 152/156 (97.44%), Query Frame = 0
Query: 1 MDRQSTKRPRESSEEQSSLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFDLSFGVFDFPWL 60
M+RQSTKRPRESS EQSSL EIGNGKKQRLHGGSDDAKEPLPRTF+DFDLSFGVFDFPWL
Sbjct: 1 MERQSTKRPRESSAEQSSLLEIGNGKKQRLHGGSDDAKEPLPRTFYDFDLSFGVFDFPWL 60
Query: 61 KESLIYCESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVWSNLPDPWEAEYEAQV 120
KESLIY ESEDWKLDDVFFTSFYNGLSTADAT+IGTELSSGQLVWSNLPDPWEAEYEAQV
Sbjct: 61 KESLIYSESEDWKLDDVFFTSFYNGLSTADATSIGTELSSGQLVWSNLPDPWEAEYEAQV 120
Query: 121 PPTTLDDGGGGQAGEEMDCIWSSLLNQPLQQGSRAL 157
PPTTLDDGGGGQAGE MDCIWSSLLNQPLQQGSRAL
Sbjct: 121 PPTTLDDGGGGQAGEGMDCIWSSLLNQPLQQGSRAL 156
BLAST of CmoCh03G006350 vs. ExPASy TrEMBL
Match:
A0A0A0KH39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510330 PE=4 SV=1)
HSP 1 Score: 179.1 bits (453), Expect = 1.4e-41
Identity = 102/169 (60.36%), Postives = 116/169 (68.64%), Query Frame = 0
Query: 1 MDRQSTKRPRESSE---------EQSSLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFD-L 60
M+R +TKRPRESS +QSSLPEI N K+Q H D+A+E P T FDFD L
Sbjct: 1 MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSH---DNAQESSPGTSFDFDLL 60
Query: 61 SFGVFDFPWLKESLIYCESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVWSNLPD 120
SFGVFDFPWLK+ LIY +S+DWK +DVFFTS YNG STAD I T L+ G LPD
Sbjct: 61 SFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTAD---IATPLTIGTAFTEFLPD 120
Query: 121 PWEAEYEAQV---PPTTLDDGGGGQAGEEMDCIWSSLLNQPLQQGSRAL 157
PWE +YEAQ PP +LD GG Q GE MDCIW S+LNQPLQQGS AL
Sbjct: 121 PWEKDYEAQAPPPPPPSLD--GGEQGGEAMDCIWRSVLNQPLQQGSSAL 161
BLAST of CmoCh03G006350 vs. ExPASy TrEMBL
Match:
A0A5A7SLQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00440 PE=4 SV=1)
HSP 1 Score: 153.3 bits (386), Expect = 8.4e-34
Identity = 86/147 (58.50%), Postives = 100/147 (68.03%), Query Frame = 0
Query: 15 EQSSLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFD-LSFGVFDFPWLKESLIYCESEDWK 74
+QSS PEI N K+Q H D + P T FDFD LSFGVFDFPWLK+ LIY +S+DWK
Sbjct: 3 DQSSPPEIANVKRQHSHDA--DQEYSSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWK 62
Query: 75 LDDVFFTSFYNGLSTADATTIGTELSSGQLVWSN-LPDPWEAEYEAQV---PPTTLDDGG 134
+DVFFTS YNG S+ I T L+ G ++ LPDPWE +YEAQ PP +LD G
Sbjct: 63 FEDVFFTSVYNGASS--TFDIATPLTIGTKAFTEFLPDPWEKDYEAQALPQPPPSLD--G 122
Query: 135 GGQAGEEMDCIWSSLLNQPLQQGSRAL 157
G Q GE MDCIW S+LNQPLQQGS AL
Sbjct: 123 GEQGGEGMDCIWRSVLNQPLQQGSSAL 143
BLAST of CmoCh03G006350 vs. ExPASy TrEMBL
Match:
A0A6J1BUL5 (uncharacterized protein LOC111005508 OS=Momordica charantia OX=3673 GN=LOC111005508 PE=4 SV=1)
HSP 1 Score: 90.9 bits (224), Expect = 5.1e-15
Identity = 69/136 (50.74%), Postives = 77/136 (56.62%), Query Frame = 0
Query: 1 MDRQSTKRPRES--------------SEEQSSLPEIGNGKKQRLHGGSDDAKEPLPRTFF 60
MDR +TKR RES SS PEIGN KKQ GG T
Sbjct: 1 MDRHNTKRARESLSASAASSDDAVSYERSYSSPPEIGNVKKQHTDGGGGQG-----ATGR 60
Query: 61 DFDLSFGVFDFPWLKESLIYCESEDWKLDDVFFTSF-YNGLSTADAT-TIGTELS--SGQ 116
DL VFDFPWLK+SLI +SEDWK +DVFFTS NG STAD T TIGT + SGQ
Sbjct: 61 SSDLD--VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNGASTADDTLTIGTAFTELSGQ 120
BLAST of CmoCh03G006350 vs. ExPASy TrEMBL
Match:
A0A7N2LSF2 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 72.4 bits (176), Expect = 1.9e-09
Identity = 59/167 (35.33%), Postives = 84/167 (50.30%), Query Frame = 0
Query: 1 MDRQST-KRPRESSEE--QSSLPEIGNGKKQR-----LHGGSDDAKEPLPRTFFDFDLSF 60
M+R++ KR RE +E Q+ +I K+ L+ +DD L
Sbjct: 1 MERENQHKRVREGDDEEYQNCSKKIDAEKQDSSKGVDLNDVNDDKDSEKTSCDSSLALDE 60
Query: 61 GVFDFPWLKESLIYCESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVWS------ 120
GVFDFPWLK+ +I +SEDWKL+D F +S Y+ ST +A E +GQ +
Sbjct: 61 GVFDFPWLKDGMI-SKSEDWKLEDTFSSSLYDTSSTNEAGI--DEFPAGQCLCQTPEPAL 120
Query: 121 -NLPDPWEAEYEAQVPPTTLDDGGGGQAGEEMDCIWSSLLNQPLQQG 153
N PD E +++ + DDG G CIW+SLL++PLQQG
Sbjct: 121 LNKPDDHEEKFDDNLRRPQEDDGLG--------CIWTSLLSEPLQQG 156
BLAST of CmoCh03G006350 vs. NCBI nr
Match:
KAG6603846.1 (hypothetical protein SDJN03_04455, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 313.5 bits (802), Expect = 1.0e-81
Identity = 152/156 (97.44%), Postives = 153/156 (98.08%), Query Frame = 0
Query: 1 MDRQSTKRPRESSEEQSSLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFDLSFGVFDFPWL 60
MDRQSTKRPRESS EQSSLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFDLSFGVFDFPWL
Sbjct: 1 MDRQSTKRPRESSAEQSSLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFDLSFGVFDFPWL 60
Query: 61 KESLIYCESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVWSNLPDPWEAEYEAQV 120
KESLIY ESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVWSNLPDPWEAEYEAQV
Sbjct: 61 KESLIYSESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVWSNLPDPWEAEYEAQV 120
Query: 121 PPTTLDDGGGGQAGEEMDCIWSSLLNQPLQQGSRAL 157
PPTTLDDGGGGQAGE +DCIWSSLLNQPLQQGSRAL
Sbjct: 121 PPTTLDDGGGGQAGEGIDCIWSSLLNQPLQQGSRAL 156
BLAST of CmoCh03G006350 vs. NCBI nr
Match:
XP_022977867.1 (uncharacterized protein LOC111478029 [Cucurbita maxima])
HSP 1 Score: 307.0 bits (785), Expect = 9.4e-80
Identity = 149/156 (95.51%), Postives = 152/156 (97.44%), Query Frame = 0
Query: 1 MDRQSTKRPRESSEEQSSLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFDLSFGVFDFPWL 60
M+RQSTKRPRESS EQSSL EIGNGKKQRLHGGSDDAKEPLPRTF+DFDLSFGVFDFPWL
Sbjct: 1 MERQSTKRPRESSAEQSSLLEIGNGKKQRLHGGSDDAKEPLPRTFYDFDLSFGVFDFPWL 60
Query: 61 KESLIYCESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVWSNLPDPWEAEYEAQV 120
KESLIY ESEDWKLDDVFFTSFYNGLSTADAT+IGTELSSGQLVWSNLPDPWEAEYEAQV
Sbjct: 61 KESLIYSESEDWKLDDVFFTSFYNGLSTADATSIGTELSSGQLVWSNLPDPWEAEYEAQV 120
Query: 121 PPTTLDDGGGGQAGEEMDCIWSSLLNQPLQQGSRAL 157
PPTTLDDGGGGQAGE MDCIWSSLLNQPLQQGSRAL
Sbjct: 121 PPTTLDDGGGGQAGEGMDCIWSSLLNQPLQQGSRAL 156
BLAST of CmoCh03G006350 vs. NCBI nr
Match:
KGN49015.1 (hypothetical protein Csa_004415 [Cucumis sativus])
HSP 1 Score: 179.1 bits (453), Expect = 2.9e-41
Identity = 102/169 (60.36%), Postives = 116/169 (68.64%), Query Frame = 0
Query: 1 MDRQSTKRPRESSE---------EQSSLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFD-L 60
M+R +TKRPRESS +QSSLPEI N K+Q H D+A+E P T FDFD L
Sbjct: 1 MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSH---DNAQESSPGTSFDFDLL 60
Query: 61 SFGVFDFPWLKESLIYCESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVWSNLPD 120
SFGVFDFPWLK+ LIY +S+DWK +DVFFTS YNG STAD I T L+ G LPD
Sbjct: 61 SFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTAD---IATPLTIGTAFTEFLPD 120
Query: 121 PWEAEYEAQV---PPTTLDDGGGGQAGEEMDCIWSSLLNQPLQQGSRAL 157
PWE +YEAQ PP +LD GG Q GE MDCIW S+LNQPLQQGS AL
Sbjct: 121 PWEKDYEAQAPPPPPPSLD--GGEQGGEAMDCIWRSVLNQPLQQGSSAL 161
BLAST of CmoCh03G006350 vs. NCBI nr
Match:
KAG6594718.1 (hypothetical protein SDJN03_11271, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 162.9 bits (411), Expect = 2.2e-36
Identity = 96/172 (55.81%), Postives = 109/172 (63.37%), Query Frame = 0
Query: 1 MDRQSTKRPRESS---------------EEQSSLPEIGNGKKQRLHGGSDDAKEPLPRTF 60
MDR++ KRPRESS EQSS PEIGNG+K++ G
Sbjct: 1 MDRRNAKRPRESSSSSSSSSSSSSAGVRNEQSSQPEIGNGEKRQHVEGFG--------RL 60
Query: 61 FDFDLSFGVFDFPWLKESLIYCESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVW 120
FD DLSFGVFDFPWLK+SLIY + EDWK++DVFFTSF +TAD TE S QLVW
Sbjct: 61 FDLDLSFGVFDFPWLKDSLIYSKYEDWKVEDVFFTSFDGVSTTADIAL--TEWSE-QLVW 120
Query: 121 SNLPDPWEAEYEAQVPPTTLD----DGGGGQAGEEMDCIWSSLLNQPLQQGS 154
NLPDPWE EYEA V P T + G G AGE MDC+W+SLLNQPLQQGS
Sbjct: 121 CNLPDPWEEEYEAHVAPATATATAVEDGEGPAGEGMDCVWNSLLNQPLQQGS 161
BLAST of CmoCh03G006350 vs. NCBI nr
Match:
KAA0025593.1 (hypothetical protein E6C27_scaffold253G00830 [Cucumis melo var. makuwa] >TYK12468.1 hypothetical protein E5676_scaffold255G00440 [Cucumis melo var. makuwa])
HSP 1 Score: 153.3 bits (386), Expect = 1.7e-33
Identity = 86/147 (58.50%), Postives = 100/147 (68.03%), Query Frame = 0
Query: 15 EQSSLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFD-LSFGVFDFPWLKESLIYCESEDWK 74
+QSS PEI N K+Q H D + P T FDFD LSFGVFDFPWLK+ LIY +S+DWK
Sbjct: 3 DQSSPPEIANVKRQHSHDA--DQEYSSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWK 62
Query: 75 LDDVFFTSFYNGLSTADATTIGTELSSGQLVWSN-LPDPWEAEYEAQV---PPTTLDDGG 134
+DVFFTS YNG S+ I T L+ G ++ LPDPWE +YEAQ PP +LD G
Sbjct: 63 FEDVFFTSVYNGASS--TFDIATPLTIGTKAFTEFLPDPWEKDYEAQALPQPPPSLD--G 122
Query: 135 GGQAGEEMDCIWSSLLNQPLQQGSRAL 157
G Q GE MDCIW S+LNQPLQQGS AL
Sbjct: 123 GEQGGEGMDCIWRSVLNQPLQQGSSAL 143
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1IJM6 | 4.5e-80 | 95.51 | uncharacterized protein LOC111478029 OS=Cucurbita maxima OX=3661 GN=LOC111478029... | [more] |
A0A0A0KH39 | 1.4e-41 | 60.36 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510330 PE=4 SV=1 | [more] |
A0A5A7SLQ6 | 8.4e-34 | 58.50 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1BUL5 | 5.1e-15 | 50.74 | uncharacterized protein LOC111005508 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
A0A7N2LSF2 | 1.9e-09 | 35.33 | Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAG6603846.1 | 1.0e-81 | 97.44 | hypothetical protein SDJN03_04455, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022977867.1 | 9.4e-80 | 95.51 | uncharacterized protein LOC111478029 [Cucurbita maxima] | [more] |
KGN49015.1 | 2.9e-41 | 60.36 | hypothetical protein Csa_004415 [Cucumis sativus] | [more] |
KAG6594718.1 | 2.2e-36 | 55.81 | hypothetical protein SDJN03_11271, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAA0025593.1 | 1.7e-33 | 58.50 | hypothetical protein E6C27_scaffold253G00830 [Cucumis melo var. makuwa] >TYK1246... | [more] |
Match Name | E-value | Identity | Description | |