CmoCh03G005050 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G005050
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	pre-mRNA-splicing factor SYF1
Location	Cmo_Chr03: 5301057 .. 5305637 (-)
RNA-Seq Expression	CmoCh03G005050
Synteny	CmoCh03G005050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCATCTTCTTCTTCTTCTTCTGTTCCTATCGACTTCTCCTTTTCGTCTCCTGAAGGGTTTAGGGTTCCGTTATGGAGGATTCTTACTGTTGAAGAGGCAGCCATTAGAGAAACTGCCCTCTGTTTCGGTGATTTATGCGCTATTGAGTTCATTGTACACAATCGAGCTTCGCTGCCTCTTTAACGGAGCCTTGCAACTTTCTGATAATTGTTTATCTTTCGATTTCCTCGTGCAATTTCAGTCGGGAAGCATTTTTCACAGTGTTTTGTTGTGGGAGATTTGCCGAATTAGGGCTGTTGTTAGGTTTTTTCTTCCATGTCGATTTCCCAAGATTTATATCCGTCGCAAGATGACCTTCTCTACGAGGAAGAGCTTCTTCGGAATCCTTTTAGTTTGAAGTTGTGGTGGCGCTACCTCATAGCACGAGCAGAATCACCATTCAAGAAGCGGTTCATTATCTACGAGCGAGCTCTGAAAGCCCTCCCGGGTAGCTATAAGTTATGGTATGCATATCTGCGCGAACGCCTCGATCTGGTACGAAATCTTCCTATTACTCATTCTCAGTACGAAACTCTTAATAACACGTTTGAACGAGCTCTTGTGACCATGCATAAAATGCCTAGAATATGGATAATGTACCTACAAACTTTGACGAACCAGAAATTAGTGACCCGAACGCGTCGGACGTTTGACCGAGCCCTTTGTGCCCTTCCAGTGACACAACATGATCGCATTTGGGAGCCATACCTCGTTTTTGTTAGCCAAAAGGGTATTCCAATTGAGACCTCGCTTAGAGTTTATCGAAGGTATTTAAAATATGATCCAACACATATTGAAGACTTGATTGAATTTTTGGTTAATTCAAATCTGTGGCAAGAAGCTGCTGAGAATTTGGCTTCCGTGTTGAATGACGATCAATTTTATTCTATTAAGGGGAAGACCAAGCATCGGCTGTGGTTAGAGTTGTGTGATTTGCTCACTAGACATGCCACTGAGGTTTCAGGGTTGAATGTTGATGCTATAATACGGGGCGGCATTAGGAAGTTCACTGATGAAGTAGGGCGCTTATGGACATCACTTGCAGAATATTACATCAGAAGGAATTTGCACGAGAAGGCAAGAGATATATTTGAAGAGGGGATGACTACTGTTGTTACGGTAAGAGATTTTAGTGTGATATTTGATTCATACTCTCAATTCGAGGAGAGTATGCTAGCTCATAAAATGGAAAATATGGATTTGAGTGATGAGGAAGATGAAGCACAGGAAAATGGTCTCGAGGAGGAGGCGGAAGAGGACATCCGATTAGATCTTGATTTATCAGTTTCTAAGTTTGAGAAGAAGATACTTCTAGGGTTTTGGATGTACGATGATAATGACATTGATTTAAGGCTAGCTAGGTTAGACCATCTAATGGACAGAAGACCAGAATTAGCTAATAGTGTTCTTCTACGACAAAATCCTCATAATGTCGAACAATGGCATCGGAGGATTAAATTATTTGAGGGCAATCCCACAAGACAGATATTGACGTATACTGAGGCTGTGAGAACAGTGGACCCCATGAAAGCAGTAGGTAAGCCTCATACCTTGTGGGTTGCTTTTGCTAAGCTGTATGAAACCCACAAAGATCTTCCAAATGCAAGAGTTATTTTTGACAAAGCTGTACAAGTTAACTACAAGACTGTGGATAACTTGGCTAGCATTTGGTGTGAATGGGCGGAAATGGAATTGAGGCATAAAAATTTTAAAGGAGCTCTCGAGCTCATGCGTCGAGCTACAGCCGAGCCATCTGTTGAAGTCAAACGAAAAGGTAGCTCCAAAATGCTTTCACATTAGTAATTCCACTCATGTATAATTATGTTACTGATTCTCTCATTTTCAGTTAATGGTAATCTAGGTTTTTCTTGTGTTAATGCATCTTGGCATTTATTCGCAAGTATTTTGGTCGCTTAGACCAAGGAATTAAATTAGAGGTAATTTTGTAGGATATTTTGAACAATAAGTTAAATAGTTTGTTTCTCAACAAAATAATACTCATTTTAACATGCCTGTATTTGTCATTGTCAATTTAATATGAGCTCAAGGTATATGGAGCAGCAGTAATAGTTACATTGGTTTATGGTTATAATTGCAGTGGCTGCTGATGGTAATGAACCGGTCCAGATGAAGGTGCACAAGTCCCTAAGACTTTGGACCTTTTATGTGGATCTGGAAGAAAGTCTTGGAACCTTGGAGTCTACCCGTGCAGTTTATGAGCGAATACTAGACTTAAGAATTGCTACCCCACAAATTATAATCAACTATGCTTTGCTTCTTGAGGTATGCTAAATTTGGATTATGTCAGTTTACCTTACCTTTTCTATTCTGTGGACGGATTAACTCATAATTTTGACATGGCCAGGAACACAAGTACTTCGAAGATGCATTCAAGGTTTATGAAAGGGGAGTCAAGATTTTCAAATATCCTCATGTTAAAGATATATGGGTTACATATCTATCCAAGTTTGTAAAAAGATATGGGAAGACAAAATTGGAGCGAGCAAGAGAACTATTTGAGCATGCGGTTGAAACGGTATGTATAATGAATCTCTTATCCATCTCTTGCATCTCTTTGAATCAATAGAATTGGTTCTTATGAGAAAAAAAGAAAAAGGTTCTTGTAATTATGCTGGAATGCAATTTTCCTGAAACTATCTAATTGTAATAGATTACAAAAAAGAAGCCTTTTGAATGTTCCATGACAGTTGGAGATCTTTGAAATTATTCTACTTTGGCTTGGTTTGAAGAAAGTACAAGAGTTCCAAGATGCTTATGAAGTTGTAAAAGTTCTGTAAAGACTGGTGTCTGTAGTTTAAACATATTTGAAGCAAAAATAATGGACACTTGTTTTTTTCTTTTTTAAGGAAACAATTTTCATTGATTGAGACTTGTAAATTGCCCCTCTAGCAATAGATATACATTCTTTTTTCCATTCCAAGTGACTGTCATATGTTCTTGTTCGTCTGGATCTATTTTAGATTATGAAAGTTCTTTGTTTCTGTTTTTGGAAATAATGAAAATGGTAGGTAGGATTTGTGTTTGGTAGTTCTTAAGGAGACCATTTAGGATCTTAAAATCCAGTGTTTCCTCACCTTTATTCCCTTCTGGAGCAATACTTTTTGAGTATTTCTTGCTTCATTATAACATTCTTTTTCATTTAGTAGATTCAAGGCCTTGCCATTGTTTGGCAGTCGAATGATATACAATAGATATGATAATGCTAATGGTTCTATATTTTGATTGTGCTTCCAGGCACCCGCTGATTCAGTTAGGCCTTTGTATCTTCAATATGCAAAGCTTGAGGAAGACCATGGTTTGGCAAAGCGGGCTATGAAGGTCTATGATCAGGCAACTAAAGCTGTTCCAAATAATGAGAAACTGAGCATGTATGAAATATACATTGCCCGTGCAGCCGAGATATTTGGTGTTCCTAAAACTAGAGAAATCTATGAACAAGCAATAGAATCTGGTCTTCCGGATCAAGATGTGAAGACCATGTGCTTGAAGTATGCTGAGCTGGAGAAGAGTTTGGGTGAAATTGATCGTGCTCGTGGAATATATGTATTTGCTTCACAGTTTGCAGACCCGAGATCAGATTTGAACTTTTGGAACAAGTGGCACGAGTTCGAGGTCCAACATGGAAATGAAGATACTTTTAGAGAGATGCTTCGTATCAAAAGGAGTGTTTCTGCTAGCTATAGCCAGGTATTTTCTTATTCAACACTTCTAATGTTAACTGGAAATATTGTTAACTGAGAGTACCTCAATTTCGTGAATTTCAAGACTGTGGGCTATAAGAATATGGTATTATTATAACTAAATCTTACACATTTGTACCGTTTTCTGTTCTTCAGACACATTTTATACTGCCGGAGTATCTAATGCAAAAGGATCAGACACTGAACCTTGACGAGGCAAAAGACAAATTGAAGCAGGCTGGGGTTACAGAAGACGAAATGGCTGCTCTTGAGAGGCAGTTGGCCCCGGCAATCGAAGACTCGGCCAAAGATAACAGCCGTAAAGTTGGTTTCGTGAGTGCTGGAGTGGAGGAATCACAAGCAGATGGAGTACCAAAGGTCACTGCTCATCAAGAAGACATTGAATTACCAGATGAAAGTGACTCGGAAGAAGACGAGAAGGTTGAAATTGCTCAGAAAGAAGTCCCATCTGCAGTTTTCGGAGGCCTTGCTCGAAAGAAGGAAGACTCCGATGAGACCGACAGAGAGAAGGACGATGACAGCCATCTTGGTGCGCTTGAGAGAATAAAAAGGCAAAAAAAAGCTTAGTAGTAGTGTTTTGTAATTTAATGAAGAGTTGTGTTAAAATTAATGAATTTTTGAAGGAAATATCAACAAAAAAAACACCCACCCTTCCTGCATTCTTGGGGTTTATGGTAGAAAAGAACATCTTTTTAGACTATAAATTACAAGTAATCGATTATTTCAAACTGAGATTTATTTCATTTCTCTCTAATTTTAATCGTTTTCTCTTGGAGTTGGATCAACAAAGTGCAATTAAAGGAAATAACAACAACAAG

mRNA sequence

GCCCATCTTCTTCTTCTTCTTCTGTTCCTATCGACTTCTCCTTTTCGTCTCCTGAAGGGTTTAGGGTTCCGTTATGGAGGATTCTTACTGTTGAAGAGGCAGCCATTAGAGAAACTGCCCTCTGTTTCGGTGATTTATGCGCTATTGAGTTCATTGTACACAATCGAGCTTCGCTGCCTCTTTAACGGAGCCTTGCAACTTTCTGATAATTGTTTATCTTTCGATTTCCTCGTGCAATTTCAGTCGGGAAGCATTTTTCACAGTGTTTTGTTGTGGGAGATTTGCCGAATTAGGGCTGTTGTTAGGTTTTTTCTTCCATGTCGATTTCCCAAGATTTATATCCGTCGCAAGATGACCTTCTCTACGAGGAAGAGCTTCTTCGGAATCCTTTTAGTTTGAAGTTGTGGTGGCGCTACCTCATAGCACGAGCAGAATCACCATTCAAGAAGCGGTTCATTATCTACGAGCGAGCTCTGAAAGCCCTCCCGGGTAGCTATAAGTTATGGTATGCATATCTGCGCGAACGCCTCGATCTGGTACGAAATCTTCCTATTACTCATTCTCAGTACGAAACTCTTAATAACACGTTTGAACGAGCTCTTGTGACCATGCATAAAATGCCTAGAATATGGATAATGTACCTACAAACTTTGACGAACCAGAAATTAGTGACCCGAACGCGTCGGACGTTTGACCGAGCCCTTTGTGCCCTTCCAGTGACACAACATGATCGCATTTGGGAGCCATACCTCGTTTTTGTTAGCCAAAAGGGTATTCCAATTGAGACCTCGCTTAGAGTTTATCGAAGGTATTTAAAATATGATCCAACACATATTGAAGACTTGATTGAATTTTTGGTTAATTCAAATCTGTGGCAAGAAGCTGCTGAGAATTTGGCTTCCGTGTTGAATGACGATCAATTTTATTCTATTAAGGGGAAGACCAAGCATCGGCTGTGGTTAGAGTTGTGTGATTTGCTCACTAGACATGCCACTGAGGTTTCAGGGTTGAATGTTGATGCTATAATACGGGGCGGCATTAGGAAGTTCACTGATGAAGTAGGGCGCTTATGGACATCACTTGCAGAATATTACATCAGAAGGAATTTGCACGAGAAGGCAAGAGATATATTTGAAGAGGGGATGACTACTGTTGTTACGGTAAGAGATTTTAGTGTGATATTTGATTCATACTCTCAATTCGAGGAGAGTATGCTAGCTCATAAAATGGAAAATATGGATTTGAGTGATGAGGAAGATGAAGCACAGGAAAATGGTCTCGAGGAGGAGGCGGAAGAGGACATCCGATTAGATCTTGATTTATCAGTTTCTAAGTTTGAGAAGAAGATACTTCTAGGGTTTTGGATGTACGATGATAATGACATTGATTTAAGGCTAGCTAGGTTAGACCATCTAATGGACAGAAGACCAGAATTAGCTAATAGTGTTCTTCTACGACAAAATCCTCATAATGTCGAACAATGGCATCGGAGGATTAAATTATTTGAGGGCAATCCCACAAGACAGATATTGACGTATACTGAGGCTGTGAGAACAGTGGACCCCATGAAAGCAGTAGGTAAGCCTCATACCTTGTGGGTTGCTTTTGCTAAGCTGTATGAAACCCACAAAGATCTTCCAAATGCAAGAGTTATTTTTGACAAAGCTGTACAAGTTAACTACAAGACTGTGGATAACTTGGCTAGCATTTGGTGTGAATGGGCGGAAATGGAATTGAGGCATAAAAATTTTAAAGGAGCTCTCGAGCTCATGCGTCGAGCTACAGCCGAGCCATCTGTTGAAGTCAAACGAAAAGTTAATGGTAATCTAGGTTTTTCTTGTGTTAATGCATCTTGGCATTTATTCGCAATGGCTGCTGATGGTAATGAACCGGTCCAGATGAAGGTGCACAAGTCCCTAAGACTTTGGACCTTTTATGTGGATCTGGAAGAAAGTCTTGGAACCTTGGAGTCTACCCGTGCAGTTTATGAGCGAATACTAGACTTAAGAATTGCTACCCCACAAATTATAATCAACTATGCTTTGCTTCTTGAGGAACACAAGTACTTCGAAGATGCATTCAAGGTTTATGAAAGGGGAGTCAAGATTTTCAAATATCCTCATGTTAAAGATATATGGGTTACATATCTATCCAAGTTTGTAAAAAGATATGGGAAGACAAAATTGGAGCGAGCAAGAGAACTATTTGAGCATGCGGTTGAAACGGCACCCGCTGATTCAGTTAGGCCTTTGTATCTTCAATATGCAAAGCTTGAGGAAGACCATGGTTTGGCAAAGCGGGCTATGAAGGTCTATGATCAGGCAACTAAAGCTGTTCCAAATAATGAGAAACTGAGCATGTATGAAATATACATTGCCCGTGCAGCCGAGATATTTGGTGTTCCTAAAACTAGAGAAATCTATGAACAAGCAATAGAATCTGGTCTTCCGGATCAAGATGTGAAGACCATGTGCTTGAAGTATGCTGAGCTGGAGAAGAGTTTGGGTGAAATTGATCGTGCTCGTGGAATATATGTATTTGCTTCACAGTTTGCAGACCCGAGATCAGATTTGAACTTTTGGAACAAGTGGCACGAGTTCGAGGTCCAACATGGAAATGAAGATACTTTTAGAGAGATGCTTCGTATCAAAAGGAGTGTTTCTGCTAGCTATAGCCAGACACATTTTATACTGCCGGAGTATCTAATGCAAAAGGATCAGACACTGAACCTTGACGAGGCAAAAGACAAATTGAAGCAGGCTGGGGTTACAGAAGACGAAATGGCTGCTCTTGAGAGGCAGTTGGCCCCGGCAATCGAAGACTCGGCCAAAGATAACAGCCGTAAAGTTGGTTTCGTGAGTGCTGGAGTGGAGGAATCACAAGCAGATGGAGTACCAAAGGTCACTGCTCATCAAGAAGACATTGAATTACCAGATGAAAGTGACTCGGAAGAAGACGAGAAGGTTGAAATTGCTCAGAAAGAAGTCCCATCTGCAGTTTTCGGAGGCCTTGCTCGAAAGAAGGAAGACTCCGATGAGACCGACAGAGAGAAGGACGATGACAGCCATCTTGGTGCGCTTGAGAGAATAAAAAGGCAAAAAAAAGCTTAGTAGTAGTGTTTTGTAATTTAATGAAGAGTTGTGTTAAAATTAATGAATTTTTGAAGGAAATATCAACAAAAAAAACACCCACCCTTCCTGCATTCTTGGGGTTTATGGTAGAAAAGAACATCTTTTTAGACTATAAATTACAAGTAATCGATTATTTCAAACTGAGATTTATTTCATTTCTCTCTAATTTTAATCGTTTTCTCTTGGAGTTGGATCAACAAAGTGCAATTAAAGGAAATAACAACAACAAG

Coding sequence (CDS)

ATGTCGATTTCCCAAGATTTATATCCGTCGCAAGATGACCTTCTCTACGAGGAAGAGCTTCTTCGGAATCCTTTTAGTTTGAAGTTGTGGTGGCGCTACCTCATAGCACGAGCAGAATCACCATTCAAGAAGCGGTTCATTATCTACGAGCGAGCTCTGAAAGCCCTCCCGGGTAGCTATAAGTTATGGTATGCATATCTGCGCGAACGCCTCGATCTGGTACGAAATCTTCCTATTACTCATTCTCAGTACGAAACTCTTAATAACACGTTTGAACGAGCTCTTGTGACCATGCATAAAATGCCTAGAATATGGATAATGTACCTACAAACTTTGACGAACCAGAAATTAGTGACCCGAACGCGTCGGACGTTTGACCGAGCCCTTTGTGCCCTTCCAGTGACACAACATGATCGCATTTGGGAGCCATACCTCGTTTTTGTTAGCCAAAAGGGTATTCCAATTGAGACCTCGCTTAGAGTTTATCGAAGGTATTTAAAATATGATCCAACACATATTGAAGACTTGATTGAATTTTTGGTTAATTCAAATCTGTGGCAAGAAGCTGCTGAGAATTTGGCTTCCGTGTTGAATGACGATCAATTTTATTCTATTAAGGGGAAGACCAAGCATCGGCTGTGGTTAGAGTTGTGTGATTTGCTCACTAGACATGCCACTGAGGTTTCAGGGTTGAATGTTGATGCTATAATACGGGGCGGCATTAGGAAGTTCACTGATGAAGTAGGGCGCTTATGGACATCACTTGCAGAATATTACATCAGAAGGAATTTGCACGAGAAGGCAAGAGATATATTTGAAGAGGGGATGACTACTGTTGTTACGGTAAGAGATTTTAGTGTGATATTTGATTCATACTCTCAATTCGAGGAGAGTATGCTAGCTCATAAAATGGAAAATATGGATTTGAGTGATGAGGAAGATGAAGCACAGGAAAATGGTCTCGAGGAGGAGGCGGAAGAGGACATCCGATTAGATCTTGATTTATCAGTTTCTAAGTTTGAGAAGAAGATACTTCTAGGGTTTTGGATGTACGATGATAATGACATTGATTTAAGGCTAGCTAGGTTAGACCATCTAATGGACAGAAGACCAGAATTAGCTAATAGTGTTCTTCTACGACAAAATCCTCATAATGTCGAACAATGGCATCGGAGGATTAAATTATTTGAGGGCAATCCCACAAGACAGATATTGACGTATACTGAGGCTGTGAGAACAGTGGACCCCATGAAAGCAGTAGGTAAGCCTCATACCTTGTGGGTTGCTTTTGCTAAGCTGTATGAAACCCACAAAGATCTTCCAAATGCAAGAGTTATTTTTGACAAAGCTGTACAAGTTAACTACAAGACTGTGGATAACTTGGCTAGCATTTGGTGTGAATGGGCGGAAATGGAATTGAGGCATAAAAATTTTAAAGGAGCTCTCGAGCTCATGCGTCGAGCTACAGCCGAGCCATCTGTTGAAGTCAAACGAAAAGTTAATGGTAATCTAGGTTTTTCTTGTGTTAATGCATCTTGGCATTTATTCGCAATGGCTGCTGATGGTAATGAACCGGTCCAGATGAAGGTGCACAAGTCCCTAAGACTTTGGACCTTTTATGTGGATCTGGAAGAAAGTCTTGGAACCTTGGAGTCTACCCGTGCAGTTTATGAGCGAATACTAGACTTAAGAATTGCTACCCCACAAATTATAATCAACTATGCTTTGCTTCTTGAGGAACACAAGTACTTCGAAGATGCATTCAAGGTTTATGAAAGGGGAGTCAAGATTTTCAAATATCCTCATGTTAAAGATATATGGGTTACATATCTATCCAAGTTTGTAAAAAGATATGGGAAGACAAAATTGGAGCGAGCAAGAGAACTATTTGAGCATGCGGTTGAAACGGCACCCGCTGATTCAGTTAGGCCTTTGTATCTTCAATATGCAAAGCTTGAGGAAGACCATGGTTTGGCAAAGCGGGCTATGAAGGTCTATGATCAGGCAACTAAAGCTGTTCCAAATAATGAGAAACTGAGCATGTATGAAATATACATTGCCCGTGCAGCCGAGATATTTGGTGTTCCTAAAACTAGAGAAATCTATGAACAAGCAATAGAATCTGGTCTTCCGGATCAAGATGTGAAGACCATGTGCTTGAAGTATGCTGAGCTGGAGAAGAGTTTGGGTGAAATTGATCGTGCTCGTGGAATATATGTATTTGCTTCACAGTTTGCAGACCCGAGATCAGATTTGAACTTTTGGAACAAGTGGCACGAGTTCGAGGTCCAACATGGAAATGAAGATACTTTTAGAGAGATGCTTCGTATCAAAAGGAGTGTTTCTGCTAGCTATAGCCAGACACATTTTATACTGCCGGAGTATCTAATGCAAAAGGATCAGACACTGAACCTTGACGAGGCAAAAGACAAATTGAAGCAGGCTGGGGTTACAGAAGACGAAATGGCTGCTCTTGAGAGGCAGTTGGCCCCGGCAATCGAAGACTCGGCCAAAGATAACAGCCGTAAAGTTGGTTTCGTGAGTGCTGGAGTGGAGGAATCACAAGCAGATGGAGTACCAAAGGTCACTGCTCATCAAGAAGACATTGAATTACCAGATGAAAGTGACTCGGAAGAAGACGAGAAGGTTGAAATTGCTCAGAAAGAAGTCCCATCTGCAGTTTTCGGAGGCCTTGCTCGAAAGAAGGAAGACTCCGATGAGACCGACAGAGAGAAGGACGATGACAGCCATCTTGGTGCGCTTGAGAGAATAAAAAGGCAAAAAAAAGCTTAG

Protein sequence

MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSYKLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTRTRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFLVNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGGIRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESMLAHKMENMDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRLARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAVGKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKGALELMRRATAEPSVEVKRKVNGNLGFSCVNASWHLFAMAADGNEPVQMKVHKSLRLWTFYVDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAKRAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDNSRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAVFGGLARKKEDSDETDREKDDDSHLGALERIKRQKKA

Homology

[Close]

BLAST of CmoCh03G005050 vs. ExPASy Swiss-Prot
Match: Q9DCD2 (Pre-mRNA-splicing factor SYF1 OS=Mus musculus OX=10090 GN=Xab2 PE=1 SV=1)

HSP 1 Score: 836.3 bits (2159), Expect = 3.5e-241
Identity = 453/908 (49.89%), Postives = 603/908 (66.41%), Query Frame = 0


Query: 6   DLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSYKLWYA 65
           DL   ++DL YEEE++RN FS+K W RY+  +  +P  +   +YERALK LP SYKLWY 
Sbjct: 14  DLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYR 73

Query: 66  YLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTRTRRTF 125
           YL+ R   V++  +T   YE +NN  ERA V MHKMPR+W+ Y Q L +Q  VT TRRTF
Sbjct: 74  YLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTF 133

Query: 126 DRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFLVNSNL 185
           DRAL ALP+TQH RIW  YL F+    +P ET++R YRR+LK  P   E+ IE+L +S+ 
Sbjct: 134 DRALRALPITQHSRIWPLYLRFLRSHPLP-ETAVRGYRRFLKLSPESAEEYIEYLKSSDR 193

Query: 186 WQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGGIRKFT 245
             EAA+ LA+V+ND++F S  GK+ ++LW ELCDL++++  +V  LNVDAIIRGG+ +FT
Sbjct: 194 LDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFT 253

Query: 246 DEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESMLAHKME 305
           D++G+LW SLA+YYIR    EKARD++EE + TV+TVRDF+ +FDSY+QFEESM+A KME
Sbjct: 254 DQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKME 313

Query: 306 NMDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRLARLDH 365
                     A E G EEE                           DD D++LRLAR + 
Sbjct: 314 T---------ASELGREEE---------------------------DDVDLELRLARFEQ 373

Query: 366 LMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAVGKPHT 425
           L+ RRP L NSVLLRQNPH+V +WH+R+ L +G P   I TYTEAV+TVDP KA GKPHT
Sbjct: 374 LISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHT 433

Query: 426 LWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKGALELM 485
           LWVAFAK YE +  L +ARVI +KA +VN+K VD+LAS+WC+  E+ELRH+N+  AL+L+
Sbjct: 434 LWVAFAKFYEDNGQLDDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALKLL 493

Query: 486 RRATAEPSVEVKRKVNGNLGFSCVNASWHLFAMAADGNEPVQMKVHKSLRLWTFYVDLEE 545
           R+ATA P+                       A   DG+EPVQ +V+KSL++W+   DLEE
Sbjct: 494 RKATALPARR---------------------AEYFDGSEPVQNRVYKSLKVWSMLADLEE 553

Query: 546 SLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKYPHVKD 605
           SLGT +ST+AVY+RILDLRIATPQI+INYA+ LEEHKYFE++FK YERG+ +FK+P+V D
Sbjct: 554 SLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSD 613

Query: 606 IWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAKRAMKV 665
           IW TYL+KF+ RYG  KLERAR+LFE A++  P    + LYL YA+LEE+ GLA+ AM V
Sbjct: 614 IWSTYLTKFISRYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAV 673

Query: 666 YDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCLKYAEL 725
           YD+AT+AV   ++  M+ IYI RAAEI+GV  TR IY++AIE  L D+  + MCL++A++
Sbjct: 674 YDRATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEV-LSDEHAREMCLRFADM 733

Query: 726 EKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRSVSASY 785
           E  LGEIDRAR IY F SQ  DPR+   FW  W +FEV+HGNEDT REMLRI+RSV A+Y
Sbjct: 734 ECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSVQATY 793

Query: 786 -SQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN---- 845
            +Q +F+  + L               L       D+M  LE++      ++ +D     
Sbjct: 794 NTQVNFMASQMLKVSGSATG---TVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPPRA 853

Query: 846 SRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSE----EDEKVEIAQKEVPSAVFG 905
             K+ FV +     +   + +  A+ E+I+L ++ D +    E  +V + Q+ VP+AVFG
Sbjct: 854 QSKIFFVRSDASREELAELAQ-QANPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFG 855

[Close]

BLAST of CmoCh03G005050 vs. ExPASy Swiss-Prot
Match: Q99PK0 (Pre-mRNA-splicing factor SYF1 OS=Rattus norvegicus OX=10116 GN=Xab2 PE=2 SV=1)

HSP 1 Score: 836.3 bits (2159), Expect = 3.5e-241
Identity = 453/908 (49.89%), Postives = 603/908 (66.41%), Query Frame = 0


Query: 6   DLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSYKLWYA 65
           DL   ++DL YEEE++RN FS+K W RY+  +  +P  +   +YERALK LP SYKLWY 
Sbjct: 14  DLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYR 73

Query: 66  YLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTRTRRTF 125
           YL+ R   V++  +T   YE +NN  ERA V MHKMPR+W+ Y Q L +Q  VT TRRTF
Sbjct: 74  YLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTF 133

Query: 126 DRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFLVNSNL 185
           DRAL ALP+TQH RIW  YL F+    +P ET++R YRR+LK  P   E+ IE+L +S+ 
Sbjct: 134 DRALRALPITQHSRIWPLYLRFLRSHPLP-ETAVRGYRRFLKLSPESAEEYIEYLKSSDR 193

Query: 186 WQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGGIRKFT 245
             EAA+ LA+V+ND++F S  GK+ ++LW ELCDL++++  +V  LNVDAIIRGG+ +FT
Sbjct: 194 LDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFT 253

Query: 246 DEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESMLAHKME 305
           D++G+LW SLA+YYIR    EKARD++EE + TV+TVRDF+ +FDSY+QFEESM+A KME
Sbjct: 254 DQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKME 313

Query: 306 NMDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRLARLDH 365
                     A E G EEE                           DD D++LRLAR + 
Sbjct: 314 T---------ASELGREEE---------------------------DDVDLELRLARFEQ 373

Query: 366 LMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAVGKPHT 425
           L+ RRP L NSVLLRQNPH+V +WH+R+ L +G P   I TYTEAV+TVDP KA GKPHT
Sbjct: 374 LISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHT 433

Query: 426 LWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKGALELM 485
           LWVAFAK YE +  L +ARVI +KA +VN+K VD+LAS+WC+  E+ELRH+N+  AL+L+
Sbjct: 434 LWVAFAKFYEDNGQLDDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALKLL 493

Query: 486 RRATAEPSVEVKRKVNGNLGFSCVNASWHLFAMAADGNEPVQMKVHKSLRLWTFYVDLEE 545
           R+ATA P+                       A   DG+EPVQ +V+KSL++W+   DLEE
Sbjct: 494 RKATALPARR---------------------AEYFDGSEPVQNRVYKSLKVWSMLADLEE 553

Query: 546 SLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKYPHVKD 605
           SLGT +ST+AVY+RILDLRIATPQI+INYA+ LEEHKYFE++FK YERG+ +FK+P+V D
Sbjct: 554 SLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSD 613

Query: 606 IWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAKRAMKV 665
           IW TYL+KF+ RYG  KLERAR+LFE A++  P    + LYL YA+LEE+ GLA+ AM V
Sbjct: 614 IWSTYLTKFISRYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAV 673

Query: 666 YDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCLKYAEL 725
           YD+AT+AV   ++  M+ IYI RAAEI+GV  TR IY++AIE  L D+  + MCL++A++
Sbjct: 674 YDRATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEV-LSDEHAREMCLRFADM 733

Query: 726 EKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRSVSASY 785
           E  LGEIDRAR IY F SQ  DPR+   FW  W +FEV+HGNEDT REMLRI+RSV A+Y
Sbjct: 734 ECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSVQATY 793

Query: 786 -SQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN---- 845
            +Q +F+  + L               L       D+M  LE++      ++ +D     
Sbjct: 794 NTQVNFMASQMLKVSGSATG---TVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPPRA 853

Query: 846 SRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSE----EDEKVEIAQKEVPSAVFG 905
             K+ FV +     +   + +  A+ E+I+L ++ D +    E  +V + Q+ VP+AVFG
Sbjct: 854 QSKIFFVRSDASREELAELAQ-QANPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFG 855

[Close]

BLAST of CmoCh03G005050 vs. ExPASy Swiss-Prot
Match: Q9HCS7 (Pre-mRNA-splicing factor SYF1 OS=Homo sapiens OX=9606 GN=XAB2 PE=1 SV=2)

HSP 1 Score: 830.9 bits (2145), Expect = 1.5e-239
Identity = 450/908 (49.56%), Postives = 601/908 (66.19%), Query Frame = 0


Query: 6   DLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSYKLWYA 65
           DL   ++DL YEEE++RN FS+K W RY+  +  +P  +   +YERALK LP SYKLWY 
Sbjct: 14  DLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYR 73

Query: 66  YLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTRTRRTF 125
           YL+ R   V++  +T   YE +NN  ERA V MHKMPR+W+ Y Q L +Q  VT TRRTF
Sbjct: 74  YLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTF 133

Query: 126 DRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFLVNSNL 185
           DRAL ALP+TQH RIW  YL F+    +P ET++R YRR+LK  P   E+ IE+L +S+ 
Sbjct: 134 DRALRALPITQHSRIWPLYLRFLRSHPLP-ETAVRGYRRFLKLSPESAEEYIEYLKSSDR 193

Query: 186 WQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGGIRKFT 245
             EAA+ LA+V+ND++F S  GK+ ++LW ELCDL++++  +V  LNVDAIIRGG+ +FT
Sbjct: 194 LDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFT 253

Query: 246 DEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESMLAHKME 305
           D++G+LW SLA+YYIR    EKARD++EE + TV+TVRDF+ +FDSY+QFEESM+A KME
Sbjct: 254 DQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKME 313

Query: 306 NMDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRLARLDH 365
                     A E G EEE                           DD D++LRLAR + 
Sbjct: 314 T---------ASELGREEE---------------------------DDVDLELRLARFEQ 373

Query: 366 LMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAVGKPHT 425
           L+ RRP L NSVLLRQNPH+V +WH+R+ L +G P   I TYTEAV+TVDP KA GKPHT
Sbjct: 374 LISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHT 433

Query: 426 LWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKGALELM 485
           LWVAFAK YE +  L +ARVI +KA +VN+K VD+LAS+WC+  E+ELRH+N+  AL L+
Sbjct: 434 LWVAFAKFYEDNGQLDDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALRLL 493

Query: 486 RRATAEPSVEVKRKVNGNLGFSCVNASWHLFAMAADGNEPVQMKVHKSLRLWTFYVDLEE 545
           R+ATA P+                       A   DG+EPVQ +V+KSL++W+   DLEE
Sbjct: 494 RKATALPARR---------------------AEYFDGSEPVQNRVYKSLKVWSMLADLEE 553

Query: 546 SLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKYPHVKD 605
           SLGT +ST+AVY+RILDLRIATPQI+INYA+ LEEHKYFE++FK YERG+ +FK+P+V D
Sbjct: 554 SLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSD 613

Query: 606 IWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAKRAMKV 665
           IW TYL+KF+ RYG  KLERAR+LFE A++  P    + LYL YA+LEE+ GLA+ AM V
Sbjct: 614 IWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAV 673

Query: 666 YDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCLKYAEL 725
           Y++AT+AV   ++  M+ IYI RAAEI+GV  TR IY++AIE  L D+  + MCL++A++
Sbjct: 674 YERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEV-LSDEHAREMCLRFADM 733

Query: 726 EKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRSVSASY 785
           E  LGEIDRAR IY F SQ  DPR+   FW  W +FEV+HGNEDT +EMLRI+RSV A+Y
Sbjct: 734 ECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSVQATY 793

Query: 786 -SQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN---- 845
            +Q +F+  + L               L       D+M  LE++      ++ +D     
Sbjct: 794 NTQVNFMASQMLKVSGSATG---TVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPLRA 853

Query: 846 SRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSE----EDEKVEIAQKEVPSAVFG 905
             K+ FV +     +   + +   + E+I+L ++ D +    E  +V + Q+ VP+AVFG
Sbjct: 854 QSKILFVRSDASREELAELAQ-QVNPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFG 855

[Close]

BLAST of CmoCh03G005050 vs. ExPASy Swiss-Prot
Match: A1Z9G2 (Pre-mRNA-splicing factor syf1 homolog OS=Drosophila melanogaster OX=7227 GN=fand PE=1 SV=1)

HSP 1 Score: 815.5 bits (2105), Expect = 6.3e-235
Identity = 445/939 (47.39%), Postives = 600/939 (63.90%), Query Frame = 0


Query: 2   SISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSYK 61
           S++ ++    +D+ YEEE+LRN +S+K W RY+  +A++P     ++YERALK LPGSYK
Sbjct: 8   SLNLEINFEVEDVPYEEEILRNAYSVKHWLRYIDHKAKAPNNGVNMVYERALKELPGSYK 67

Query: 62  LWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTRT 121
           +W+ YLR R   VR    T   YE +N+ FERALV MHKMPRIW+ Y   +T+Q  +TRT
Sbjct: 68  IWHNYLRTRRKQVRGKIPTDPMYEEVNSAFERALVFMHKMPRIWMDYGAFMTSQCKITRT 127

Query: 122 RRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFLV 181
           R  FDRAL ALP+TQH RIW  YL FV +  +P ET+LRVYRRYLK  P   E+ +++L 
Sbjct: 128 RHVFDRALRALPITQHGRIWPLYLQFVRRFEMP-ETALRVYRRYLKLFPEDTEEYVDYLQ 187

Query: 182 NSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGGI 241
            ++   EAA+ LA +++++ F S  GK+ H+LW ELCDL++++  +V  LNVDAIIRGG+
Sbjct: 188 EADRLDEAAQQLAHIVDNEHFVSKHGKSNHQLWNELCDLISKNPHKVHSLNVDAIIRGGL 247

Query: 242 RKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESMLA 301
           R++TD++G LW SLA+YY+R  L ++ARDI+EE + TV TVRDF+ +FD Y+QFEE  L 
Sbjct: 248 RRYTDQLGHLWNSLADYYVRSGLFDRARDIYEEAIQTVTTVRDFTQVFDEYAQFEELSLN 307

Query: 302 HKMENMDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRLA 361
            +ME +        A E   EE                            DD D++LRL+
Sbjct: 308 RRMEQV-------AANEAATEE----------------------------DDIDVELRLS 367

Query: 362 RLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAVG 421
           R ++LM+RR  L NSVLLRQNPHNV +WH+R+ L+E  P   I TYTEAV+TV P +AVG
Sbjct: 368 RFEYLMERRLLLLNSVLLRQNPHNVHEWHKRVTLYEDKPAEIISTYTEAVQTVQPKQAVG 427

Query: 422 KPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKGA 481
           K HTLWV FAK YE +  + +ARV+F++  +V Y  V++LA++WCEWAEMELR + F+ A
Sbjct: 428 KLHTLWVEFAKFYEANGQVEDARVVFERGTEVEYVKVEDLAAVWCEWAEMELRQQQFEAA 487

Query: 482 LELMRRATAEPSVEVKRKVNGNLGFSCVNASWHLFAMAADGNEPVQMKVHKSLRLWTFYV 541
           L+LM+RATA P    KRK+                    D  E VQ ++H+SL++W+ Y 
Sbjct: 488 LKLMQRATAMP----KRKI-----------------AYYDDTETVQARLHRSLKVWSMYA 547

Query: 542 DLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKYP 601
           DLEES GT ++ +AVYERI+DL+I TPQIIINY + LEEH YFE+A++ YE+G+ +FK+P
Sbjct: 548 DLEESFGTFKTCKAVYERIIDLKICTPQIIINYGMFLEEHNYFEEAYRAYEKGISLFKWP 607

Query: 602 HVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAKR 661
           +V DIW +YL+KF++RYG TKLERAR+LFE  ++  P +  +  YL YAKLEE+HGLA+ 
Sbjct: 608 NVYDIWNSYLTKFLERYGGTKLERARDLFEQCLDQCPPEHAKYFYLLYAKLEEEHGLARH 667

Query: 662 AMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCLK 721
           AM VYD+AT AV  +E   MY I+I +AAEI+G+P+TREIYE+AIES LP+Q+++ MC+K
Sbjct: 668 AMSVYDRATSAVKEDEMFDMYNIFIKKAAEIYGLPRTREIYEKAIES-LPEQNMRHMCVK 727

Query: 722 YAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRSV 781
           +AELE  LGE+DRAR IY   SQ  DPR   +FW  W EFEV+HGNEDT REMLRIKRSV
Sbjct: 728 FAELETKLGEVDRARAIYAHCSQVCDPRITADFWQTWKEFEVRHGNEDTMREMLRIKRSV 787

Query: 782 SASY-SQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN 841
            A+Y +Q + +  ++L     + N   A D    AG   D M  LE +   A  +S +  
Sbjct: 788 QATYNTQVNMMAAQFL-----STNNGAAAD--AGAGAGPDAMRLLEEKARQAAAESKQKP 847

Query: 842 SRK----VGFVSAGVEESQADGVPKVTAHQE-DIELPDESDSEEDE-------------- 901
             K    + FV    +    D    V    E DI   DE D EED+              
Sbjct: 848 IEKAASNIMFVRGETQGGAKDKKDTVVNPDEIDIGDSDEDDEEEDDDEENEMTNENQASA 881

Query: 902 -------------KVEIAQKEVPSAVFGGLARKKE-DSD 907
                        K+   QK +P+ VFG L    + DSD
Sbjct: 908 AVTKTDEEGLVMKKLRFEQKAIPAKVFGSLKPSNQGDSD 881

[Close]

BLAST of CmoCh03G005050 vs. ExPASy Swiss-Prot
Match: Q54Z08 (Pre-mRNA-splicing factor SYF1 OS=Dictyostelium discoideum OX=44689 GN=xab2 PE=3 SV=1)

HSP 1 Score: 741.5 bits (1913), Expect = 1.2e-212
Identity = 386/892 (43.27%), Postives = 573/892 (64.24%), Query Frame = 0


Query: 7   LYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSYKLWYAY 66
           + PS DDL YEE++ +NP+S+  W RYL  +  SP K+R  IYERA++ LP SYK+W+ Y
Sbjct: 25  IQPSIDDLPYEEDVSKNPYSVNCWLRYLEFKQGSPQKQRNYIYERAIRELPRSYKIWHQY 84

Query: 67  LRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTRTRRTFD 126
           L ER   +R   I  + +E +N  FER+LV + KMPRIWI Y + L  Q+ +T TR+TFD
Sbjct: 85  LLERTLAIRGKCILENSFEAVNTLFERSLVFLDKMPRIWIEYCEFLMIQEKITLTRKTFD 144

Query: 127 RALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFLVNSNLW 186
           RAL ALPVTQH RIW  Y  F+ ++ IP  T +RVY+RYLK  P  +E+ IE+L+    W
Sbjct: 145 RALIALPVTQHYRIWNEYTKFILKRSIPSLTCIRVYKRYLKIQPEKVEEYIEYLIKIKEW 204

Query: 187 QEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGGIRKFTD 246
           QE    L  +L++ +F SIKGK++H  WL+LC++L+ +  +++G++VD++IR GI KF+D
Sbjct: 205 QEVVNQLIKLLDNVKFKSIKGKSRHDHWLQLCEILSSYPKQITGVDVDSVIRSGIGKFSD 264

Query: 247 EVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESMLAHKMEN 306
           ++G+LW  L++YYI+    EKARDIFEE +T+V T RDFS I++SY+QFE+S++A K E 
Sbjct: 265 QIGKLWCYLSDYYIQLAQFEKARDIFEEALTSVGTARDFSFIWESYTQFEDSLIAAKQEI 324

Query: 307 MDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRLARLDHL 366
                         LEE+  ED  L+ D+ + ++E                       +L
Sbjct: 325 --------------LEEDPSEDNLLEFDIIIERYE-----------------------NL 384

Query: 367 MDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQ----ILTYTEAVRTVDPMKAVGK 426
           + R+P L NSV+L+QNP+NV++W +R+ L+  NPT      I T+T++++++DP  A GK
Sbjct: 385 IQRQPLLLNSVMLKQNPNNVQEWLKRVNLY-SNPTPNVKMIIQTFTDSIKSIDPQLAKGK 444

Query: 427 PHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKGAL 486
             T++  FA  YE +  L  AR+IF+ ++ VN+KT+D+L++++C++AEMEL+H+N++ A+
Sbjct: 445 LSTIYSTFAHFYEQNNKLSQARLIFENSLTVNFKTIDDLSTLYCDYAEMELKHRNYEKAI 504

Query: 487 ELMRRATAEPSVEVKRKVNGNLGFSCVNASWHLFAMAADGNEPVQMKVHKSLRLWTFYVD 546
           E+++R T  P     +K N                   + NEPVQ ++ KS+++WTFYVD
Sbjct: 505 EILKRGTVSP-----KKQN----------------TIIEENEPVQKRLFKSIKIWTFYVD 564

Query: 547 LEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKYPH 606
           LEES GT  +T+++YE+++ L++ TPQII+N+A  LEE+KYFED FK YE GV++F +PH
Sbjct: 565 LEESFGTFHNTKSIYEKMIQLKVVTPQIILNFAKYLEENKYFEDMFKAYEHGVQLFLFPH 624

Query: 607 VKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAKRA 666
           V+DIW+TYL+KF++RY   KLER R+LFE  +   P       YL YA  EE +GLA+ +
Sbjct: 625 VQDIWITYLTKFIQRYAGMKLERTRDLFEQVLSKVPPKESIIFYLMYANFEEQYGLARHS 684

Query: 667 MKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCLKY 726
           M VYD+A K+V   ++  MY +YI RA+E FGV +TREI+ +AIE  LPDQ V+ MCLK+
Sbjct: 685 MAVYDRAAKSVDKEDRFKMYLLYIHRASEFFGVNQTREIFSKAIEQ-LPDQYVRDMCLKF 744

Query: 727 AELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRSVS 786
           A++EK  GEIDRAR IY+  SQF+DPR+ + +WN W +FE  HGNEDTF+EMLRI+RSV 
Sbjct: 745 ADMEKKYGEIDRARSIYIHGSQFSDPRTSMFYWNTWSDFEKLHGNEDTFKEMLRIRRSVQ 804

Query: 787 ASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDNSR 846
           ASY   +      L   ++  N D+  DK +Q    + +    ++Q     + S    S+
Sbjct: 805 ASYITQN----PTLALLNKLNNKDDKDDKNQQQKQQQQQQEKQQQQQQQQQQASTLTKSK 846

Query: 847 KVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAV 895
            V      V   +     K   + ++I L D+ + EE+E+ ++A K  P  +
Sbjct: 865 PV-----TVSLPETIQYNKKIENDDEINL-DDDEEEEEEEDQLAIKAFPKTL 846

[Close]

BLAST of CmoCh03G005050 vs. ExPASy TrEMBL
Match: A0A6J1GEX2 (pre-mRNA-splicing factor SYF1 OS=Cucurbita moschata OX=3662 GN=LOC111453335 PE=4 SV=1)

HSP 1 Score: 1796.2 bits (4651), Expect = 0.0e+00
Identity = 912/930 (98.06%), Postives = 912/930 (98.06%), Query Frame = 0


Query: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY 60
           MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY
Sbjct: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY 60

Query: 61  KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120
           KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR
Sbjct: 61  KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120

Query: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180
           TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL
Sbjct: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180

Query: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240
           VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG
Sbjct: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240

Query: 241 IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300
           IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML
Sbjct: 241 IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300

Query: 301 AHKMENMDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL 360
           AHKMENMDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL
Sbjct: 301 AHKMENMDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL 360

Query: 361 ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV 420
           ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV
Sbjct: 361 ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV 420

Query: 421 GKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG 480
           GKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG
Sbjct: 421 GKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG 480

Query: 481 ALELMRRATAEPSVEVKRKVNGNLGFSCVNASWHLFAMAADGNEPVQMKVHKSLRLWTFY 540
           ALELMRRATAEPSVEVKRKV                  AADGNEPVQMKVHKSLRLWTFY
Sbjct: 481 ALELMRRATAEPSVEVKRKV------------------AADGNEPVQMKVHKSLRLWTFY 540

Query: 541 VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY 600
           VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY
Sbjct: 541 VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY 600

Query: 601 PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK 660
           PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK
Sbjct: 601 PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK 660

Query: 661 RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL 720
           RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL
Sbjct: 661 RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL 720

Query: 721 KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS 780
           KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS
Sbjct: 721 KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS 780

Query: 781 VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN 840
           VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN
Sbjct: 781 VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN 840

Query: 841 SRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAVFGGLAR 900
           SRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAVFGGLAR
Sbjct: 841 SRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAVFGGLAR 900

Query: 901 KKEDSDETDREKDDDSHLGALERIKRQKKA 931
           KKEDSDETDREKDDDSHLGALERIKRQKKA
Sbjct: 901 KKEDSDETDREKDDDSHLGALERIKRQKKA 912

[Close]

BLAST of CmoCh03G005050 vs. ExPASy TrEMBL
Match: A0A6J1IPZ1 (pre-mRNA-splicing factor SYF1 OS=Cucurbita maxima OX=3661 GN=LOC111477778 PE=4 SV=1)

HSP 1 Score: 1785.8 bits (4624), Expect = 0.0e+00
Identity = 906/930 (97.42%), Postives = 910/930 (97.85%), Query Frame = 0


Query: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY 60
           MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY
Sbjct: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY 60

Query: 61  KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120
           KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR
Sbjct: 61  KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120

Query: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180
           TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL
Sbjct: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180

Query: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240
           VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG
Sbjct: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240

Query: 241 IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300
           IRK+TDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML
Sbjct: 241 IRKYTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300

Query: 301 AHKMENMDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL 360
           AHKMENMDLSDEEDEAQENGLEEE EEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL
Sbjct: 301 AHKMENMDLSDEEDEAQENGLEEEEEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL 360

Query: 361 ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV 420
           ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV
Sbjct: 361 ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV 420

Query: 421 GKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG 480
           GKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG
Sbjct: 421 GKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG 480

Query: 481 ALELMRRATAEPSVEVKRKVNGNLGFSCVNASWHLFAMAADGNEPVQMKVHKSLRLWTFY 540
           ALELMRRATAEPSVEVKRKV                  AADGNEPVQMKVHKSLRLWTFY
Sbjct: 481 ALELMRRATAEPSVEVKRKV------------------AADGNEPVQMKVHKSLRLWTFY 540

Query: 541 VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY 600
           VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY
Sbjct: 541 VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY 600

Query: 601 PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK 660
           PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK
Sbjct: 601 PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK 660

Query: 661 RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL 720
           RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL
Sbjct: 661 RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL 720

Query: 721 KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS 780
           KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS
Sbjct: 721 KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS 780

Query: 781 VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN 840
           VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN
Sbjct: 781 VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN 840

Query: 841 SRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAVFGGLAR 900
           SRKVGFVSAGVEESQADGV KVTAHQEDIELPDESD+EEDEKVEIAQKEVPSAVFGGLAR
Sbjct: 841 SRKVGFVSAGVEESQADGVSKVTAHQEDIELPDESDTEEDEKVEIAQKEVPSAVFGGLAR 900

Query: 901 KKEDSDETDREKDDDSHLGALERIKRQKKA 931
           KKED+DET+REKDDDSHLGALERIKRQKKA
Sbjct: 901 KKEDTDETNREKDDDSHLGALERIKRQKKA 912

[Close]

BLAST of CmoCh03G005050 vs. ExPASy TrEMBL
Match: A0A0A0KLE6 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517050 PE=4 SV=1)

HSP 1 Score: 1756.1 bits (4547), Expect = 0.0e+00
Identity = 895/932 (96.03%), Postives = 900/932 (96.57%), Query Frame = 0


Query: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY 60
           MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAE+PFKKRFIIYERALKALPGSY
Sbjct: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAEAPFKKRFIIYERALKALPGSY 60

Query: 61  KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120
           KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR
Sbjct: 61  KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120

Query: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180
           TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL
Sbjct: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180

Query: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240
           VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG
Sbjct: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240

Query: 241 IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300
           IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML
Sbjct: 241 IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300

Query: 301 AHKMENMDLSDEEDEAQENGL--EEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDL 360
           AHKMENMDLSDEEDE QENGL  EEE EEDIRLD+DLSVSKFEKKIL GFW+YDDNDIDL
Sbjct: 301 AHKMENMDLSDEEDEVQENGLEEEEEEEEDIRLDVDLSVSKFEKKILQGFWLYDDNDIDL 360

Query: 361 RLARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMK 420
           RLARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMK
Sbjct: 361 RLARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMK 420

Query: 421 AVGKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNF 480
           AVGKPHTLWVAFAKLYE HKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNF
Sbjct: 421 AVGKPHTLWVAFAKLYEAHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNF 480

Query: 481 KGALELMRRATAEPSVEVKRKVNGNLGFSCVNASWHLFAMAADGNEPVQMKVHKSLRLWT 540
           KGALELMRRATAEPSVEVKRKV                  AADGNEPVQMKVHKSLRLWT
Sbjct: 481 KGALELMRRATAEPSVEVKRKV------------------AADGNEPVQMKVHKSLRLWT 540

Query: 541 FYVDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIF 600
           FYVDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIF
Sbjct: 541 FYVDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIF 600

Query: 601 KYPHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGL 660
           KYPHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGL
Sbjct: 601 KYPHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGL 660

Query: 661 AKRAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTM 720
           AKRAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTM
Sbjct: 661 AKRAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTM 720

Query: 721 CLKYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIK 780
           CLKYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIK
Sbjct: 721 CLKYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIK 780

Query: 781 RSVSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAK 840
           RSVSASYSQTHFILPEYLMQKDQT+NLDEAKDKLKQAGVTEDEMAALERQLAPAIED+AK
Sbjct: 781 RSVSASYSQTHFILPEYLMQKDQTMNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDTAK 840

Query: 841 DNSRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAVFGGL 900
           DN RKVGFVSAGV ESQADG  KVTAHQEDIELPDESDSEEDE VEIAQKEVPSAVFGGL
Sbjct: 841 DNGRKVGFVSAGV-ESQADGELKVTAHQEDIELPDESDSEEDENVEIAQKEVPSAVFGGL 900

Query: 901 ARKKEDSDETDREKDDDSHLGALERIKRQKKA 931
            RKKEDSDE D EKDDDSHLGALERIKRQKKA
Sbjct: 901 TRKKEDSDEVDGEKDDDSHLGALERIKRQKKA 913

[Close]

BLAST of CmoCh03G005050 vs. ExPASy TrEMBL
Match: A0A5D3CNV4 (Pre-mRNA-splicing factor SYF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007200 PE=4 SV=1)

HSP 1 Score: 1755.0 bits (4544), Expect = 0.0e+00
Identity = 895/932 (96.03%), Postives = 901/932 (96.67%), Query Frame = 0


Query: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY 60
           MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAE+PFKKRFIIYERALKALPGSY
Sbjct: 62  MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAEAPFKKRFIIYERALKALPGSY 121

Query: 61  KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120
           KLWYAYLRERLDLVRNLPI HSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR
Sbjct: 122 KLWYAYLRERLDLVRNLPIIHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 181

Query: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180
           TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL
Sbjct: 182 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 241

Query: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240
           VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG
Sbjct: 242 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 301

Query: 241 IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300
           IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML
Sbjct: 302 IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 361

Query: 301 AHKMENMDLSDEEDEAQENGL--EEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDL 360
           AHKMENMDLSDEEDE QENGL  EEE EEDIRLD+DLSVSKFEKKIL GFW+YDDNDIDL
Sbjct: 362 AHKMENMDLSDEEDEVQENGLEEEEEEEEDIRLDVDLSVSKFEKKILQGFWLYDDNDIDL 421

Query: 361 RLARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMK 420
           RLARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMK
Sbjct: 422 RLARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMK 481

Query: 421 AVGKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNF 480
           AVGKPHTLWVAFAKLYE HKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNF
Sbjct: 482 AVGKPHTLWVAFAKLYEAHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNF 541

Query: 481 KGALELMRRATAEPSVEVKRKVNGNLGFSCVNASWHLFAMAADGNEPVQMKVHKSLRLWT 540
           KGALELMRRATAEPSVEVKRKV                  AADGNEPVQMKVHKSLRLWT
Sbjct: 542 KGALELMRRATAEPSVEVKRKV------------------AADGNEPVQMKVHKSLRLWT 601

Query: 541 FYVDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIF 600
           FYVDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIF
Sbjct: 602 FYVDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIF 661

Query: 601 KYPHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGL 660
           KYPHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGL
Sbjct: 662 KYPHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGL 721

Query: 661 AKRAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTM 720
           AKRAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTM
Sbjct: 722 AKRAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTM 781

Query: 721 CLKYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIK 780
           CLKYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIK
Sbjct: 782 CLKYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIK 841

Query: 781 RSVSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAK 840
           RSVSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIED++K
Sbjct: 842 RSVSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDTSK 901

Query: 841 DNSRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAVFGGL 900
           DNSRKVGFVSAGV ESQADG  KVTAHQEDIELPDESDSEEDE V+IAQKEVPSAVFGGL
Sbjct: 902 DNSRKVGFVSAGV-ESQADGGLKVTAHQEDIELPDESDSEEDENVQIAQKEVPSAVFGGL 961

Query: 901 ARKKEDSDETDREKDDDSHLGALERIKRQKKA 931
           ARKKEDSDE D EKDDDSHLGALERIKRQKKA
Sbjct: 962 ARKKEDSDEVDGEKDDDSHLGALERIKRQKKA 974

[Close]

BLAST of CmoCh03G005050 vs. ExPASy TrEMBL
Match: A0A1S3AZF7 (pre-mRNA-splicing factor SYF1 OS=Cucumis melo OX=3656 GN=LOC103484548 PE=4 SV=1)

HSP 1 Score: 1755.0 bits (4544), Expect = 0.0e+00
Identity = 895/932 (96.03%), Postives = 901/932 (96.67%), Query Frame = 0


Query: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY 60
           MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAE+PFKKRFIIYERALKALPGSY
Sbjct: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAEAPFKKRFIIYERALKALPGSY 60

Query: 61  KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120
           KLWYAYLRERLDLVRNLPI HSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR
Sbjct: 61  KLWYAYLRERLDLVRNLPIIHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120

Query: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180
           TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL
Sbjct: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180

Query: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240
           VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG
Sbjct: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240

Query: 241 IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300
           IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML
Sbjct: 241 IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300

Query: 301 AHKMENMDLSDEEDEAQENGL--EEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDL 360
           AHKMENMDLSDEEDE QENGL  EEE EEDIRLD+DLSVSKFEKKIL GFW+YDDNDIDL
Sbjct: 301 AHKMENMDLSDEEDEVQENGLEEEEEEEEDIRLDVDLSVSKFEKKILQGFWLYDDNDIDL 360

Query: 361 RLARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMK 420
           RLARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMK
Sbjct: 361 RLARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMK 420

Query: 421 AVGKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNF 480
           AVGKPHTLWVAFAKLYE HKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNF
Sbjct: 421 AVGKPHTLWVAFAKLYEAHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNF 480

Query: 481 KGALELMRRATAEPSVEVKRKVNGNLGFSCVNASWHLFAMAADGNEPVQMKVHKSLRLWT 540
           KGALELMRRATAEPSVEVKRKV                  AADGNEPVQMKVHKSLRLWT
Sbjct: 481 KGALELMRRATAEPSVEVKRKV------------------AADGNEPVQMKVHKSLRLWT 540

Query: 541 FYVDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIF 600
           FYVDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIF
Sbjct: 541 FYVDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIF 600

Query: 601 KYPHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGL 660
           KYPHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGL
Sbjct: 601 KYPHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGL 660

Query: 661 AKRAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTM 720
           AKRAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTM
Sbjct: 661 AKRAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTM 720

Query: 721 CLKYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIK 780
           CLKYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIK
Sbjct: 721 CLKYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIK 780

Query: 781 RSVSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAK 840
           RSVSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIED++K
Sbjct: 781 RSVSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDTSK 840

Query: 841 DNSRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAVFGGL 900
           DNSRKVGFVSAGV ESQADG  KVTAHQEDIELPDESDSEEDE V+IAQKEVPSAVFGGL
Sbjct: 841 DNSRKVGFVSAGV-ESQADGGLKVTAHQEDIELPDESDSEEDENVQIAQKEVPSAVFGGL 900

Query: 901 ARKKEDSDETDREKDDDSHLGALERIKRQKKA 931
           ARKKEDSDE D EKDDDSHLGALERIKRQKKA
Sbjct: 901 ARKKEDSDEVDGEKDDDSHLGALERIKRQKKA 913

[Close]

BLAST of CmoCh03G005050 vs. NCBI nr
Match: XP_022950160.1 (pre-mRNA-splicing factor SYF1 [Cucurbita moschata] >KAG7033896.1 Pre-mRNA-splicing factor SYF1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1796.2 bits (4651), Expect = 0.0e+00
Identity = 912/930 (98.06%), Postives = 912/930 (98.06%), Query Frame = 0


Query: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY 60
           MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY
Sbjct: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY 60

Query: 61  KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120
           KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR
Sbjct: 61  KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120

Query: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180
           TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL
Sbjct: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180

Query: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240
           VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG
Sbjct: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240

Query: 241 IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300
           IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML
Sbjct: 241 IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300

Query: 301 AHKMENMDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL 360
           AHKMENMDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL
Sbjct: 301 AHKMENMDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL 360

Query: 361 ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV 420
           ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV
Sbjct: 361 ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV 420

Query: 421 GKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG 480
           GKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG
Sbjct: 421 GKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG 480

Query: 481 ALELMRRATAEPSVEVKRKVNGNLGFSCVNASWHLFAMAADGNEPVQMKVHKSLRLWTFY 540
           ALELMRRATAEPSVEVKRKV                  AADGNEPVQMKVHKSLRLWTFY
Sbjct: 481 ALELMRRATAEPSVEVKRKV------------------AADGNEPVQMKVHKSLRLWTFY 540

Query: 541 VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY 600
           VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY
Sbjct: 541 VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY 600

Query: 601 PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK 660
           PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK
Sbjct: 601 PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK 660

Query: 661 RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL 720
           RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL
Sbjct: 661 RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL 720

Query: 721 KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS 780
           KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS
Sbjct: 721 KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS 780

Query: 781 VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN 840
           VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN
Sbjct: 781 VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN 840

Query: 841 SRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAVFGGLAR 900
           SRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAVFGGLAR
Sbjct: 841 SRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAVFGGLAR 900

Query: 901 KKEDSDETDREKDDDSHLGALERIKRQKKA 931
           KKEDSDETDREKDDDSHLGALERIKRQKKA
Sbjct: 901 KKEDSDETDREKDDDSHLGALERIKRQKKA 912

[Close]

BLAST of CmoCh03G005050 vs. NCBI nr
Match: KAG6603718.1 (Pre-mRNA-splicing factor SYF1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1795.0 bits (4648), Expect = 0.0e+00
Identity = 911/930 (97.96%), Postives = 912/930 (98.06%), Query Frame = 0


Query: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY 60
           MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY
Sbjct: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY 60

Query: 61  KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120
           KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR
Sbjct: 61  KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120

Query: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180
           TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL
Sbjct: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180

Query: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240
           VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG
Sbjct: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240

Query: 241 IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300
           IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML
Sbjct: 241 IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300

Query: 301 AHKMENMDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL 360
           AHKMENMDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL
Sbjct: 301 AHKMENMDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL 360

Query: 361 ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV 420
           ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV
Sbjct: 361 ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV 420

Query: 421 GKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG 480
           GKPHTLWVAFAKLYETHKDLPN+RVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG
Sbjct: 421 GKPHTLWVAFAKLYETHKDLPNSRVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG 480

Query: 481 ALELMRRATAEPSVEVKRKVNGNLGFSCVNASWHLFAMAADGNEPVQMKVHKSLRLWTFY 540
           ALELMRRATAEPSVEVKRKV                  AADGNEPVQMKVHKSLRLWTFY
Sbjct: 481 ALELMRRATAEPSVEVKRKV------------------AADGNEPVQMKVHKSLRLWTFY 540

Query: 541 VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY 600
           VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY
Sbjct: 541 VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY 600

Query: 601 PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK 660
           PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK
Sbjct: 601 PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK 660

Query: 661 RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL 720
           RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL
Sbjct: 661 RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL 720

Query: 721 KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS 780
           KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS
Sbjct: 721 KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS 780

Query: 781 VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN 840
           VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN
Sbjct: 781 VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN 840

Query: 841 SRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAVFGGLAR 900
           SRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAVFGGLAR
Sbjct: 841 SRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAVFGGLAR 900

Query: 901 KKEDSDETDREKDDDSHLGALERIKRQKKA 931
           KKEDSDETDREKDDDSHLGALERIKRQKKA
Sbjct: 901 KKEDSDETDREKDDDSHLGALERIKRQKKA 912

[Close]

BLAST of CmoCh03G005050 vs. NCBI nr
Match: XP_023543705.1 (pre-mRNA-splicing factor SYF1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1794.2 bits (4646), Expect = 0.0e+00
Identity = 911/930 (97.96%), Postives = 911/930 (97.96%), Query Frame = 0


Query: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY 60
           MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY
Sbjct: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY 60

Query: 61  KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120
           KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR
Sbjct: 61  KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120

Query: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180
           TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL
Sbjct: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180

Query: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240
           VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG
Sbjct: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240

Query: 241 IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300
           IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML
Sbjct: 241 IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300

Query: 301 AHKMENMDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL 360
           AHKMENMDLSDEEDEAQENGLEEE EEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL
Sbjct: 301 AHKMENMDLSDEEDEAQENGLEEEEEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL 360

Query: 361 ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV 420
           ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV
Sbjct: 361 ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV 420

Query: 421 GKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG 480
           GKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG
Sbjct: 421 GKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG 480

Query: 481 ALELMRRATAEPSVEVKRKVNGNLGFSCVNASWHLFAMAADGNEPVQMKVHKSLRLWTFY 540
           ALELMRRATAEPSVEVKRKV                  AADGNEPVQMKVHKSLRLWTFY
Sbjct: 481 ALELMRRATAEPSVEVKRKV------------------AADGNEPVQMKVHKSLRLWTFY 540

Query: 541 VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY 600
           VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY
Sbjct: 541 VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY 600

Query: 601 PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK 660
           PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK
Sbjct: 601 PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK 660

Query: 661 RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL 720
           RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL
Sbjct: 661 RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL 720

Query: 721 KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS 780
           KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS
Sbjct: 721 KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS 780

Query: 781 VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN 840
           VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN
Sbjct: 781 VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN 840

Query: 841 SRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAVFGGLAR 900
           SRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAVFGGLAR
Sbjct: 841 SRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAVFGGLAR 900

Query: 901 KKEDSDETDREKDDDSHLGALERIKRQKKA 931
           KKEDSDETDREKDDDSHLGALERIKRQKKA
Sbjct: 901 KKEDSDETDREKDDDSHLGALERIKRQKKA 912

[Close]

BLAST of CmoCh03G005050 vs. NCBI nr
Match: XP_022977433.1 (pre-mRNA-splicing factor SYF1 [Cucurbita maxima])

HSP 1 Score: 1785.8 bits (4624), Expect = 0.0e+00
Identity = 906/930 (97.42%), Postives = 910/930 (97.85%), Query Frame = 0


Query: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY 60
           MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY
Sbjct: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY 60

Query: 61  KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120
           KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR
Sbjct: 61  KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120

Query: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180
           TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL
Sbjct: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180

Query: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240
           VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG
Sbjct: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240

Query: 241 IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300
           IRK+TDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML
Sbjct: 241 IRKYTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300

Query: 301 AHKMENMDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL 360
           AHKMENMDLSDEEDEAQENGLEEE EEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL
Sbjct: 301 AHKMENMDLSDEEDEAQENGLEEEEEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL 360

Query: 361 ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV 420
           ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV
Sbjct: 361 ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV 420

Query: 421 GKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG 480
           GKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG
Sbjct: 421 GKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG 480

Query: 481 ALELMRRATAEPSVEVKRKVNGNLGFSCVNASWHLFAMAADGNEPVQMKVHKSLRLWTFY 540
           ALELMRRATAEPSVEVKRKV                  AADGNEPVQMKVHKSLRLWTFY
Sbjct: 481 ALELMRRATAEPSVEVKRKV------------------AADGNEPVQMKVHKSLRLWTFY 540

Query: 541 VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY 600
           VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY
Sbjct: 541 VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY 600

Query: 601 PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK 660
           PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK
Sbjct: 601 PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK 660

Query: 661 RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL 720
           RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL
Sbjct: 661 RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL 720

Query: 721 KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS 780
           KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS
Sbjct: 721 KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS 780

Query: 781 VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN 840
           VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN
Sbjct: 781 VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN 840

Query: 841 SRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAVFGGLAR 900
           SRKVGFVSAGVEESQADGV KVTAHQEDIELPDESD+EEDEKVEIAQKEVPSAVFGGLAR
Sbjct: 841 SRKVGFVSAGVEESQADGVSKVTAHQEDIELPDESDTEEDEKVEIAQKEVPSAVFGGLAR 900

Query: 901 KKEDSDETDREKDDDSHLGALERIKRQKKA 931
           KKED+DET+REKDDDSHLGALERIKRQKKA
Sbjct: 901 KKEDTDETNREKDDDSHLGALERIKRQKKA 912

[Close]

BLAST of CmoCh03G005050 vs. NCBI nr
Match: XP_038881960.1 (pre-mRNA-splicing factor SYF1 [Benincasa hispida])

HSP 1 Score: 1759.6 bits (4556), Expect = 0.0e+00
Identity = 895/930 (96.24%), Postives = 901/930 (96.88%), Query Frame = 0


Query: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY 60
           MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAE+PFKKRFIIYERALKALPGSY
Sbjct: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAEAPFKKRFIIYERALKALPGSY 60

Query: 61  KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120
           KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR
Sbjct: 61  KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120

Query: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180
           TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL
Sbjct: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180

Query: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240
           VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG
Sbjct: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240

Query: 241 IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300
           IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML
Sbjct: 241 IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300

Query: 301 AHKMENMDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL 360
           AHKMEN+DLSDEEDE Q NGLEEE EEDIRLD+DLSVSKFEKKIL GFW+YDDNDIDLRL
Sbjct: 301 AHKMENIDLSDEEDEVQVNGLEEEEEEDIRLDIDLSVSKFEKKILQGFWLYDDNDIDLRL 360

Query: 361 ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV 420
           ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV
Sbjct: 361 ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV 420

Query: 421 GKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG 480
           GKPHTLWVAFAKLYE HKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG
Sbjct: 421 GKPHTLWVAFAKLYEAHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG 480

Query: 481 ALELMRRATAEPSVEVKRKVNGNLGFSCVNASWHLFAMAADGNEPVQMKVHKSLRLWTFY 540
           ALELMRRATAEPSVEVKRKV                  AADGNEPVQMKVHKSLRLWTFY
Sbjct: 481 ALELMRRATAEPSVEVKRKV------------------AADGNEPVQMKVHKSLRLWTFY 540

Query: 541 VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY 600
           VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY
Sbjct: 541 VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY 600

Query: 601 PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK 660
           PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK
Sbjct: 601 PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK 660

Query: 661 RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL 720
           RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL
Sbjct: 661 RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL 720

Query: 721 KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS 780
           KYAELEKSLGEIDR+RGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS
Sbjct: 721 KYAELEKSLGEIDRSRGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS 780

Query: 781 VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDN 840
           VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIED+AKDN
Sbjct: 781 VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDTAKDN 840

Query: 841 SRKVGFVSAGVEESQADGVPKVTAHQEDIELPDESDSEEDEKVEIAQKEVPSAVFGGLAR 900
           SRKVGFVSAGV ESQADG  KVTAHQEDIELPDESDSEEDE VEIAQKEVPSAVFGGLAR
Sbjct: 841 SRKVGFVSAGV-ESQADGGLKVTAHQEDIELPDESDSEEDENVEIAQKEVPSAVFGGLAR 900

Query: 901 KKEDSDETDREKDDDSHLGALERIKRQKKA 931
           KKEDSDE D EKDDDSHLGALERIKRQKKA
Sbjct: 901 KKEDSDEVDGEKDDDSHLGALERIKRQKKA 911

[Close]

BLAST of CmoCh03G005050 vs. TAIR 10
Match: AT5G28740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 1454.1 bits (3763), Expect = 0.0e+00
Identity = 734/934 (78.59%), Postives = 823/934 (88.12%), Query Frame = 0


Query: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY 60
           M+IS+DLYPSQ+DLLYEEELLRN FSLKLWWRYLIA+AESPFKKRFIIYERALKALPGSY
Sbjct: 1   MAISKDLYPSQEDLLYEEELLRNQFSLKLWWRYLIAKAESPFKKRFIIYERALKALPGSY 60

Query: 61  KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR 120
           KLWYAYLRERLD+VRNLP+TH QY++LNNTFER LVTMHKMPRIW+MYLQTLT Q+L+TR
Sbjct: 61  KLWYAYLRERLDIVRNLPVTHPQYDSLNNTFERGLVTMHKMPRIWVMYLQTLTVQQLITR 120

Query: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL 180
           TRRTFDRALCALPVTQHDRIWEPYLVFVSQ GIPIETSLRVYRRYL YDP+HIE+ IEFL
Sbjct: 121 TRRTFDRALCALPVTQHDRIWEPYLVFVSQNGIPIETSLRVYRRYLMYDPSHIEEFIEFL 180

Query: 181 VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG 240
           V S  WQE+AE LASVLNDD+FYSIKGKTKH+LWLELC+LL  HA  +SGLNVDAIIRGG
Sbjct: 181 VKSERWQESAERLASVLNDDKFYSIKGKTKHKLWLELCELLVHHANVISGLNVDAIIRGG 240

Query: 241 IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML 300
           IRKFTDEVG LWTSLA+YYIR+NL EKARDI+EEGM  VVTVRDFSVIFD YS+FEES +
Sbjct: 241 IRKFTDEVGMLWTSLADYYIRKNLLEKARDIYEEGMMKVVTVRDFSVIFDVYSRFEESTV 300

Query: 301 AHKMENMDLSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL 360
           A KME M  SDEEDE +ENG+E++ EED+RL+ +LSV + ++KIL GFW+ DDND+DLRL
Sbjct: 301 AKKMEMMSSSDEEDENEENGVEDD-EEDVRLNFNLSVKELQRKILNGFWLNDDNDVDLRL 360

Query: 361 ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV 420
           ARL+ LM+RRP LANSVLLRQNPHNVEQWHRR+K+FEGN  +QILTYTEAVRTVDPMKAV
Sbjct: 361 ARLEELMNRRPALANSVLLRQNPHNVEQWHRRVKIFEGNAAKQILTYTEAVRTVDPMKAV 420

Query: 421 GKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG 480
           GKPHTLWVAFAKLYE HKDL N RVIFDKAVQVNYKTVD+LAS+WCEWAEMELRHKNFKG
Sbjct: 421 GKPHTLWVAFAKLYENHKDLVNTRVIFDKAVQVNYKTVDHLASVWCEWAEMELRHKNFKG 480

Query: 481 ALELMRRATAEPSVEVKRKVNGNLGFSCVNASWHLFAMAADGNEPVQMKVHKSLRLWTFY 540
           ALELMRRATA P+VEV+R+V                  AADGNEPVQMK+H+SLRLW+FY
Sbjct: 481 ALELMRRATAVPTVEVRRRV------------------AADGNEPVQMKLHRSLRLWSFY 540

Query: 541 VDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKY 600
           VDLEESLGTLESTRAVYE+ILDLRIATPQII+NYA LLEE+KYFEDAFKVYERGVKIFKY
Sbjct: 541 VDLEESLGTLESTRAVYEKILDLRIATPQIIMNYAFLLEENKYFEDAFKVYERGVKIFKY 600

Query: 601 PHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAK 660
           PHVKDIWVTYL+KFVKRYGKTKLERARELFEHAV  AP+D+VR LYLQYAKLEED+GLAK
Sbjct: 601 PHVKDIWVTYLTKFVKRYGKTKLERARELFEHAVSMAPSDAVRTLYLQYAKLEEDYGLAK 660

Query: 661 RAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCL 720
           RAMKVY++ATK VP  +KL MYEIYI+RAAEIFGVP+TREIYEQAIESGLP +DVK MC+
Sbjct: 661 RAMKVYEEATKKVPEGQKLEMYEIYISRAAEIFGVPRTREIYEQAIESGLPHKDVKIMCI 720

Query: 721 KYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRS 780
           K+AELE+SLGEIDRAR +Y ++SQFADPRSD  FWNKWHEFEVQHGNEDT+REMLRIKRS
Sbjct: 721 KFAELERSLGEIDRARALYKYSSQFADPRSDPEFWNKWHEFEVQHGNEDTYREMLRIKRS 780

Query: 781 VSASYSQTHFILPEYLMQKDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAI--EDSAK 840
           VSASYSQTHFILPE +MQKD+ L++++AK +LK+AG+ EDEMAALERQL       + AK
Sbjct: 781 VSASYSQTHFILPENMMQKDKLLDVEDAKGELKRAGLPEDEMAALERQLLSTTTPTEPAK 840

Query: 841 DNSRKVGFVSAGV--EESQADGVPKVTAHQEDIELPDESDSEE--DEKVEIAQKEVPSAV 900
           D  R+VGFVSAGV  +  + +G P VT + EDIELPDESD E   D+ VEI+QKEVP+AV
Sbjct: 841 DGGRRVGFVSAGVISQSGENEGKP-VTGNGEDIELPDESDDESDGDDHVEISQKEVPAAV 900

Query: 901 FGGLARKKEDSDETDREKDDDSHLGALERIKRQK 929
           FGGLARK+++  E   E      LGALERIKRQK
Sbjct: 901 FGGLARKRDEDGEEAGEDGAAQKLGALERIKRQK 914

[Close]

BLAST of CmoCh03G005050 vs. TAIR 10
Match: AT5G45990.1 (crooked neck protein, putative / cell cycle protein, putative )

HSP 1 Score: 81.3 bits (199), Expect = 4.6e-15
Identity = 63/247 (25.51%), Postives = 117/247 (47.37%), Query Frame = 0


Query: 533 SLRLWTFYVDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYE 592
           ++++W  Y   EES       R+V+ER L+       + + YA    ++K+  +A  V++
Sbjct: 77  NIQVWVKYAKWEESQMDYARARSVWERALEGEYRNHTLWVKYAEFEMKNKFVNNARNVWD 136

Query: 593 RGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLER---ARELFEHAVETAPADSVRPLYLQY 652
           R V +   P V  +W  Y+      Y + KL     AR++FE  +  +P       +L +
Sbjct: 137 RSVTLL--PRVDQLWEKYI------YMEEKLGNVTGARQIFERWMNWSPDQKA---WLCF 196

Query: 653 AKLEEDHGLAKRAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFG-VPKTREIYEQAIES 712
            K E  +   +RA  +Y++     P   K+S +  Y     +  G V   RE+YE+A++ 
Sbjct: 197 IKFELRYNEIERARSIYERFVLCHP---KVSAFIRYAKFEMKRGGQVKLAREVYERAVDK 256

Query: 713 GLPDQDVKTMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNE 772
              D++ + + + +AE E+   E++RAR IY FA            + K+  FE Q+G++
Sbjct: 257 LANDEEAEILFVSFAEFEERCKEVERARFIYKFALDHIRKGRAEELYKKFVAFEKQYGDK 309

Query: 773 DTFREML 776
           +   + +
Sbjct: 317 EGIEDAI 309

[Close]

BLAST of CmoCh03G005050 vs. TAIR 10
Match: AT5G41770.1 (crooked neck protein, putative / cell cycle protein, putative )

HSP 1 Score: 81.3 bits (199), Expect = 4.6e-15
Identity = 62/247 (25.10%), Postives = 117/247 (47.37%), Query Frame = 0


Query: 533 SLRLWTFYVDLEESLGTLESTRAVYERILDLRIATPQIIINYALLLEEHKYFEDAFKVYE 592
           ++++W  Y   EES       R+V+ER ++       + + YA    ++K+   A  V++
Sbjct: 91  NIQVWVKYAQWEESQKDYARARSVWERAIEGDYRNHTLWLKYAEFEMKNKFVNSARNVWD 150

Query: 593 RGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKL 652
           R V +   P V  +W  Y+    +  G   +  AR++FE  ++ +P       +L + K 
Sbjct: 151 RAVTLL--PRVDQLWYKYI-HMEEILG--NIAGARQIFERWMDWSPDQQG---WLSFIKF 210

Query: 653 EEDHGLAKRAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPD 712
           E  +   +RA  +Y++     P   K+S Y  Y     +   V + R +YE+A E    D
Sbjct: 211 ELRYNEIERARTIYERFVLCHP---KVSAYIRYAKFEMKGGEVARCRSVYERATEKLADD 270

Query: 713 QDVKTMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFR 772
           ++ + + + +AE E+   E++RAR IY FA          + + K+  FE Q+G+++   
Sbjct: 271 EEAEILFVAFAEFEERCKEVERARFIYKFALDHIPKGRAEDLYRKFVAFEKQYGDKEGIE 326

Query: 773 EMLRIKR 780
           + +  KR
Sbjct: 331 DAIVGKR 326

[Close]

BLAST of CmoCh03G005050 vs. TAIR 10
Match: AT3G51110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 8.2e-12
Identity = 62/238 (26.05%), Postives = 112/238 (47.06%), Query Frame = 0


Query: 535 RLWTFYVDLEESLGTLESTRAVYERIL-DLRIATPQIIINYALLLEEHKYFEDAFKVYER 594
           ++W  Y D EES    +  R+V+ER L D       + + YA     +K    A  V++R
Sbjct: 72  QVWVRYADWEESQKDHDRARSVWERALEDESYRNHTLWLKYAEFEMRNKSVNHARNVWDR 131

Query: 595 GVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFEHAVETAPADSVRPLYLQYAKLE 654
            VKI   P V   W  Y+    +  G   ++ AR++FE  ++ +P       +L + K E
Sbjct: 132 AVKIL--PRVDQFWYKYI-HMEEILG--NIDGARKIFERWMDWSPDQQA---WLCFIKFE 191

Query: 655 EDHGLAKRAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPD- 714
             +   +R+  +Y++     P       Y  +  + ++   V   R +YE+AIE  L D 
Sbjct: 192 LRYNEIERSRSIYERFVLCHPKASSFIRYAKFEMKNSQ---VSLARIVYERAIEM-LKDV 251

Query: 715 -QDVKTMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDLNFWNKWHEFEVQHGNED 770
            ++ + + + +AE E+   E++RAR +Y +A          + + K+  FE Q+GN++
Sbjct: 252 EEEAEMIFVAFAEFEELCKEVERARFLYKYALDHIPKGRAEDLYKKFVAFEKQYGNKE 297

[Close]

BLAST of CmoCh03G005050 vs. TAIR 10
Match: AT3G13210.1 (crooked neck protein, putative / cell cycle protein, putative )

HSP 1 Score: 65.1 bits (157), Expect = 3.4e-10
Identity = 105/449 (23.39%), Postives = 179/449 (39.87%), Query Frame = 0


Query: 252 WTSLAEYYIRRNLHEKARDIFEEGM---TTVVTVRDFSVIFDSYSQFEESMLAHKMENMD 311
           W    ++ ++ N  E AR I+E  +     V     ++     + Q E +M   +    +
Sbjct: 161 WLCFIKFELKYNEIECARSIYERFVLCHPKVSAYIRYAKFEMKHGQVELAMKVFERAKKE 220

Query: 312 LSDEEDEAQENGLEEEAEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRLARLDHLMD 371
           L+D+E+         E EE  +  LD       + +   F  ++  + D        +  
Sbjct: 221 LADDEEAEILFVAFAEFEEQYKFALDQIPKGRAENLYSKFVAFEKQNGDKEGIEDAIIGK 280

Query: 372 RRPELANSVLLRQNPHNVEQWHRRIKLFE--GNPTRQILTYTEAVRTVDPMKAVGKPH-- 431
           RR +  + V  R+NP N + W   ++L E  GN  R    Y  AV  V P +A  K +  
Sbjct: 281 RRCQYEDEV--RKNPLNYDSWFDFVRLEETVGNKDRIREIYERAVANVPPPEAQEKRYWQ 340

Query: 432 ---TLWVAFAKLYE-THKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG 491
               LW+ +A   E   +D+ + R ++   +++   +  + A IW   A+ E+R  N  G
Sbjct: 341 RYIYLWINYAFFAEMVTEDVESTRDVYRACLKLIPHSKFSFAKIWLLAAQHEIRQLNLTG 400

Query: 492 ALELMRRATAEPS--------VEVKRKVNG----------NLGFSCVNA-SWHLFA---M 551
           A +++  A  +          +E++ ++             L +S  N  +W  +A   M
Sbjct: 401 ARQILGNAIGKAPKDKIFKKYIEIELQLRNIDRCRKLYERYLEWSPGNCYAWRKYAEFEM 460

Query: 552 AADGNEPVQMKVHKSLR---------LWTFYVDLEESLGTLESTRAVYERILDLRIATPQ 611
           +    E  +     ++          LW  Y+D E S G LE TRA+YER+LD R    +
Sbjct: 461 SLAETERTRAIFELAISQPALDMPELLWKTYIDFEISEGELERTRALYERLLD-RTKHCK 520

Query: 612 IIINYALL---LEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERA 656
           + +++A       EHK  E+     ER                          K  ++RA
Sbjct: 521 VWVDFAKFEASAAEHKEDEEEEDAIER-------------------------KKDGIKRA 580

The following BLAST results are available for this feature:

BLAST of CmoCh03G005050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9DCD2	3.5e-241	49.89	Pre-mRNA-splicing factor SYF1 OS=Mus musculus OX=10090 GN=Xab2 PE=1 SV=1	[more]
Q99PK0	3.5e-241	49.89	Pre-mRNA-splicing factor SYF1 OS=Rattus norvegicus OX=10116 GN=Xab2 PE=2 SV=1	[more]
Q9HCS7	1.5e-239	49.56	Pre-mRNA-splicing factor SYF1 OS=Homo sapiens OX=9606 GN=XAB2 PE=1 SV=2	[more]
A1Z9G2	6.3e-235	47.39	Pre-mRNA-splicing factor syf1 homolog OS=Drosophila melanogaster OX=7227 GN=fand...	[more]
Q54Z08	1.2e-212	43.27	Pre-mRNA-splicing factor SYF1 OS=Dictyostelium discoideum OX=44689 GN=xab2 PE=3 ...	[more]

BLAST of CmoCh03G005050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GEX2	0.0e+00	98.06	pre-mRNA-splicing factor SYF1 OS=Cucurbita moschata OX=3662 GN=LOC111453335 PE=4...	[more]
A0A6J1IPZ1	0.0e+00	97.42	pre-mRNA-splicing factor SYF1 OS=Cucurbita maxima OX=3661 GN=LOC111477778 PE=4 S...	[more]
A0A0A0KLE6	0.0e+00	96.03	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517050 ...	[more]
A0A5D3CNV4	0.0e+00	96.03	Pre-mRNA-splicing factor SYF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3AZF7	0.0e+00	96.03	pre-mRNA-splicing factor SYF1 OS=Cucumis melo OX=3656 GN=LOC103484548 PE=4 SV=1	[more]

BLAST of CmoCh03G005050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950160.1	0.0e+00	98.06	pre-mRNA-splicing factor SYF1 [Cucurbita moschata] >KAG7033896.1 Pre-mRNA-splici...	[more]
KAG6603718.1	0.0e+00	97.96	Pre-mRNA-splicing factor SYF1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023543705.1	0.0e+00	97.96	pre-mRNA-splicing factor SYF1 [Cucurbita pepo subsp. pepo]	[more]
XP_022977433.1	0.0e+00	97.42	pre-mRNA-splicing factor SYF1 [Cucurbita maxima]	[more]
XP_038881960.1	0.0e+00	96.24	pre-mRNA-splicing factor SYF1 [Benincasa hispida]	[more]

BLAST of CmoCh03G005050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G28740.1	0.0e+00	78.59	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G45990.1	4.6e-15	25.51	crooked neck protein, putative / cell cycle protein, putative	[more]
AT5G41770.1	4.6e-15	25.10	crooked neck protein, putative / cell cycle protein, putative	[more]
AT3G51110.1	8.2e-12	26.05	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G13210.1	3.4e-10	23.39	crooked neck protein, putative / cell cycle protein, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 808..828
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 899..923
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 849..930
None	No IPR available	PANTHER	PTHR11246:SF5	PRE-MRNA-SPLICING FACTOR SYF1	coord: 8..871
IPR003107	HAT (Half-A-TPR) repeat	SMART	SM00386	hat_new_1	coord: 263..298 e-value: 16.0 score: 13.9 coord: 582..616 e-value: 11.0 score: 14.9 coord: 548..580 e-value: 26.0 score: 12.4 coord: 40..72 e-value: 6.6 score: 15.7 coord: 82..114 e-value: 4.0 score: 16.4 coord: 730..764 e-value: 210.0 score: 5.7 coord: 116..150 e-value: 30.0 score: 12.0 coord: 693..728 e-value: 240.0 score: 5.3 coord: 621..655 e-value: 6.1E-4 score: 29.1 coord: 438..474 e-value: 0.3 score: 20.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 365..524 e-value: 2.8E-15 score: 58.2 coord: 679..816 e-value: 7.6E-15 score: 56.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 16..184 e-value: 9.6E-24 score: 86.3 coord: 529..669 e-value: 6.0E-20 score: 73.9 coord: 185..331 e-value: 3.1E-6 score: 29.1
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 417..490
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 17..68
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 83..199
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 529..688
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 697..776
IPR045075	Pre-mRNA-splicing factor Syf1-like	PANTHER	PTHR11246	PRE-MRNA SPLICING FACTOR	coord: 8..871

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G005050.1	CmoCh03G005050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000349	generation of catalytic spliceosome for first transesterification step
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0006396	RNA processing
cellular_component	GO:0071014	post-mRNA release spliceosomal complex
cellular_component	GO:0000974	Prp19 complex
cellular_component	GO:0071007	U2-type catalytic step 2 spliceosome
molecular_function	GO:0005515	protein binding