CmoCh03G004750 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G004750
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein MODIFIER OF SNC1 11-like
Location	Cmo_Chr03: 5170458 .. 5174046 (-)
RNA-Seq Expression	CmoCh03G004750
Synteny	CmoCh03G004750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAAATATCTGACCGGACTGAAAAAACGAATAGAAACCTGTGCTCCCTCCTTCACGCGGCAATTCCCCTTGTTGCGTTCGTGGTTCGCAAGCAGCCTCCGATTAGGTTTCGGTTCTCAAATCTGCTCCTCTAATGGCGACGGTAGCATCTGCTGGAATCAATGACATTAGTAATAGCAAGAATCCGCTTGGAGAAAACCCTAGTCAAACCCTAGACCCGACGATTTCTTCCTCGGCCCAGCCTCCTGTCTCTGTTCCGCTGTCGTCAACTGATGGCGGGTCTTCCAAGGAAGGGGATGAATCTAAGGGCTCCGATAAGACGTCGGTTGAAGGTGATGGCGAACCTGTTTCTGATGTCCAGAGGAAAATGCGCCGCGCTGAGCGTTTTGGGATTTCGGTGCAATTGTCTGAAGAAGAAAAACGTAATTCTCGAGCAGAACGGTAAGTTTATTTATCAGTTTGCGGTCTCCGCCTCACGCCTGTGCTCGTCCTTGTGATGCTGCGTATTTGAATCCACTTATTTTGTGAGATCATGCCCTTCTTCATAGTTATTTTGCTATGATTTCTTTGAAACTATTTATTTTTCTCTCATTTTATAGACAAATGTAGGGAAAAGTCACTGGTATAAATATTACGTTACTTTATCATAAACTGCCTCAGTAGGGATTTTAACGAACTCAAAAGTTCAATTATCTCCCGGCACAGGTTAGACTGATGGTTTGCTCATGCACTTATGAGGTCGTTTGGAACTTGTAGATTATGATTTTCAGGAGTATACCAACACTGTATTGTTATATTAGTCCATTGTATCGGTTTTAACGCCCAATCTAATTGTTTATGTTCTGGTAATGGCTTGAAATTCCAATCGGAATGGTGTAAGTTTGAAATCCAAAATGATTACAACAGTGGCTTATTGATTGATGCGCGTCAAATATCATCGATTCAGTGTTGCGTCTGTGTAAAAAGAAAGAAGAAAGTTGCAGGCTTTTCTTTCTTCTATCCCTTCTCAAGTGAAATGTGGAGCCATTTGTTATGCCCTTTCAATCTGTCTCGGGGCTTCCCTAATTGCGCACCTCATGGCTCAAAGCAGATGTGCTTTTGCACTTTCTTAATTATGAAAGCCTCGTGGTTTTGTCTATAGTGTTCTGTGGCGAGTTTGGTTGGAAAGAGCTGCTAAAATCTTTGAAGATAAGTTGAAAAATGGAGACGTTGTGTGGGAATTAATTCATTTGTTGGGCTCATATCGGTGTTCTGTCTTCTCGTTTCTATAATTAAAATATTCACCGTTTCCTTTCTTTATCCAAGTTCTGTTCAGAGTTATGTTTCTCTATTATTTTTCTGTAAAATATTTTAATGTTGATTTCTGGGGACGATTGCAGGTTTGGTATGGGCACCACAACTAATGGATTGGGAGCATCAAATAAGTCAGAGGAGGTGAAGAGAAAGGCTAGAGCTGAGAGGTAGTTTCCATTTCTTTATGGATTGATAGCTCATCCTGTCAAAGAAATTGTATTTATTGTCTTTTACTCAAACTTTCTTTCAAACTTTTGCCAATTTTTTGATTATTTAGATTTGGGCTTCCTGCATCTGTGGCCACTGATGATGAGGCAAAGAAGAAAGCTCGACTTGGTAGGTTTTCTTCAACATCAAAGCCAGACTCCCAGGAGGAAGAAAAGAGGAAAGCAAGGGCAATCAGGTAGTGGGCGTATTTTTCTGTTCCCCTGGTTGTAGCTAATATTTCCAGTTCCATCGTCTGTGGTTAGTGGAAATCTTATATGGAGTCTGCAAATATTAGAATGCATCTAACATATTGTTTGTTTTTCCCTTTATTTTCTGGGTGAAGGTTTTCTAATCCAACATCAAACTCCCTCACACAAGTGGATGGGAAGGGAAACATTGAGACGGTAATGTTATCCTTTTATTCTTATTTTGTTTTCTTGTAGAATTTAGGAAACAGAAGTGTGTACTTTTTTCCAGTGCTCTTGTTCCCATTAATGATTCCCATTGTCTGTAATCAGATTGCAGATATTGCAGGCAAGGCTGGAGGTGGTGCCTGAAAAGAACATTCCCTGTTGATGGCAAGATAGCTTTTGCTTGTAATTTTCTTCTGTTGGTTCGTGTTTCCTTTCTAAGTCTGATTGGCATTTGGCCTCCAGAACGTTACATCTTATCCAAATCTAGTGTTTCTTGTTATGCCTTTTCTTATTATATCTCTGCTATTTAATCTGATGAATTATTTCTTTCTCTGGCAGGTCTAATAGCTGGTTATAATTCCCCGTAATGGCTTCCATACCCATGTTCATTCCTTTATATTATTATCTAGTTCAAAAGTCTTCCATTCTGAGGGCAGAATCAATACTGCAAGGTGCTTTGCTCCATGTTGCTCTGAGACGAGGTTCCCTAGATTCAGTTGTCAGGTTATTAATTCTCTGGTTAGGTGTTATAGTAATAGAAAATACCTCCCTAGGTCAAGCCTATCTTACAGTTTGTTAAGAATATCAGAAATCTCTGAATTTTTTATCCCTCCAATGTTCTGGTTATCATCTTCAGTTTATATCTCCCTTGTGATGGCAAGTTGGATGTTCATGATACCATTTGAACGGCAGTGCTAGGTTTCCATGTGCATTGTTTCCATCTGATACTCACTGGTTGAAATTTACTAATTTTGTCGAATTCGCCTTTGGGATTAGAAAGCTAACAGTTTCTTGCTTTACTTTGAGTTAATATCATCAGGTTTTTAGTTTTATAGTTATAATTTAGTTTGGATTTTAGGTTGTTTCTTTTTAATGGTAGGTTTTTCTTTTTGCTGACTGTAATAATGTAAGATTAATGGCCAAGTCTCAATGGTAGGAAACTCGCACGTATCTTTTGACTTTTCTTTTTCAGAAGCAGATCAAGAGTCTGAGTGCAGCTAGTTATTATCCAATCATTTACGATTGAGGTTTGGTTTCTTTGTATGATGCCACCACATCTCATCTCATGGCATCAGTGATAATAACTCATCATGGAAATGACTTCTACACTTTTTAGATGCCTAGTTTTAGTATGACCTGAAGAATAGTTCAATTAGAATGGTCATATGTTGAATCTTATTTAGAAATGCCGTTCAAAATGTCATCATGAGATAACAGCTCCAGCTTGTGTGAGAATAAACTGAAGATAAGTCTTGGGAGGGGAAGTAATTATCTATTCCCTTGGTAAGTTGTCGTGTGGGAGAAGCTGAATTCCCTCTTCTAACTTGGAAGTTTCTGATATTCTTGCTTGGTGTAATATAGGATGGACCGAGTTTTTGGAGGTATTTGTTGTGGCCCTCTTAGAAGTCTCTGCATGTATTGAGGCCTGTAGCTGAGAATGGATTGTGTACTCTAAAAATAGGTGTCTCTGTCAAGTTTCTGTTGTTTCTTCCTTCGTTTCCTTTTATCTTTATTTGCATAGCTAGTCAGCAGCTACGTGTATTTAGTTTCTTTTGGATTTTTGGTTGGATGTAATGGTATGGAATGGCCGCACACATTTATCGAGGGAATCAATCTTTTGATCAAAAGTTCTTTTTAGATAGATACATATTTTTTTCTCCTTGCTTGATCAGCCC

mRNA sequence

GTGAAATATCTGACCGGACTGAAAAAACGAATAGAAACCTGTGCTCCCTCCTTCACGCGGCAATTCCCCTTGTTGCGTTCGTGGTTCGCAAGCAGCCTCCGATTAGGTTTCGGTTCTCAAATCTGCTCCTCTAATGGCGACGGTAGCATCTGCTGGAATCAATGACATTAGTAATAGCAAGAATCCGCTTGGAGAAAACCCTAGTCAAACCCTAGACCCGACGATTTCTTCCTCGGCCCAGCCTCCTGTCTCTGTTCCGCTGTCGTCAACTGATGGCGGGTCTTCCAAGGAAGGGGATGAATCTAAGGGCTCCGATAAGACGTCGGTTGAAGGTGATGGCGAACCTGTTTCTGATGTCCAGAGGAAAATGCGCCGCGCTGAGCGTTTTGGGATTTCGGTGCAATTGTCTGAAGAAGAAAAACGTAATTCTCGAGCAGAACGGTTTGGTATGGGCACCACAACTAATGGATTGGGAGCATCAAATAAGTCAGAGGAGGTGAAGAGAAAGGCTAGAGCTGAGAGATTTGGGCTTCCTGCATCTGTGGCCACTGATGATGAGGCAAAGAAGAAAGCTCGACTTGGTAGGTTTTCTTCAACATCAAAGCCAGACTCCCAGGAGGAAGAAAAGAGGAAAGCAAGGGCAATCAGGTTTTCTAATCCAACATCAAACTCCCTCACACAAGTGGATGGGAAGGGAAACATTGAGACGATTGCAGATATTGCAGGCAAGGCTGGAGGTGGTGCCTGAAAAGAACATTCCCTGTTGATGGCAAGATAGCTTTTGCTTGTAATTTTCTTCTGTTGGTCTAATAGCTGGTTATAATTCCCCGTAATGGCTTCCATACCCATGTTCATTCCTTTATATTATTATCTAGTTCAAAAGTCTTCCATTCTGAGGGCAGAATCAATACTGCAAGGTGCTTTGCTCCATGTTGCTCTGAGACGAGGTTCCCTAGATTCAGTTGTCAGGTTATTAATTCTCTGGTTAGGTGTTATAGTAATAGAAAATACCTCCCTAGGTCAAGCCTATCTTACAGTTTGTTAAGAATATCAGAAATCTCTGAATTTTTTATCCCTCCAATGTTCTGGTTATCATCTTCAGTTTATATCTCCCTTGTGATGGCAAGTTGGATGTTCATGATACCATTTGAACGGCAGTGCTAGGTTTCCATGTGCATTGTTTCCATCTGATACTCACTGGTTGAAATTTACTAATTTTGTCGAATTCGCCTTTGGGATTAGAAAGCTAACAGTTTCTTGCTTTACTTTGAGTTAATATCATCAGGTTTTTAGTTTTATAGTTATAATTTAGTTTGGATTTTAGGTTGTTTCTTTTTAATGGTAGGTTTTTCTTTTTGCTGACTGTAATAATGTAAGATTAATGGCCAAGTCTCAATGGTAGGAAACTCGCACGTATCTTTTGACTTTTCTTTTTCAGAAGCAGATCAAGAGTCTGAGTGCAGCTAGTTATTATCCAATCATTTACGATTGAGGTTTGGTTTCTTTGTATGATGCCACCACATCTCATCTCATGGCATCAGTGATAATAACTCATCATGGAAATGACTTCTACACTTTTTAGATGCCTAGTTTTAGTATGACCTGAAGAATAGTTCAATTAGAATGGTCATATGTTGAATCTTATTTAGAAATGCCGTTCAAAATGTCATCATGAGATAACAGCTCCAGCTTGTGTGAGAATAAACTGAAGATAAGTCTTGGGAGGGGAAGTAATTATCTATTCCCTTGGTAAGTTGTCGTGTGGGAGAAGCTGAATTCCCTCTTCTAACTTGGAAGTTTCTGATATTCTTGCTTGGTGTAATATAGGATGGACCGAGTTTTTGGAGGTATTTGTTGTGGCCCTCTTAGAAGTCTCTGCATGTATTGAGGCCTGTAGCTGAGAATGGATTGTGTACTCTAAAAATAGGTGTCTCTGTCAAGTTTCTGTTGTTTCTTCCTTCGTTTCCTTTTATCTTTATTTGCATAGCTAGTCAGCAGCTACGTGTATTTAGTTTCTTTTGGATTTTTGGTTGGATGTAATGGTATGGAATGGCCGCACACATTTATCGAGGGAATCAATCTTTTGATCAAAAGTTCTTTTTAGATAGATACATATTTTTTTCTCCTTGCTTGATCAGCCC

Coding sequence (CDS)

ATGGCGACGGTAGCATCTGCTGGAATCAATGACATTAGTAATAGCAAGAATCCGCTTGGAGAAAACCCTAGTCAAACCCTAGACCCGACGATTTCTTCCTCGGCCCAGCCTCCTGTCTCTGTTCCGCTGTCGTCAACTGATGGCGGGTCTTCCAAGGAAGGGGATGAATCTAAGGGCTCCGATAAGACGTCGGTTGAAGGTGATGGCGAACCTGTTTCTGATGTCCAGAGGAAAATGCGCCGCGCTGAGCGTTTTGGGATTTCGGTGCAATTGTCTGAAGAAGAAAAACGTAATTCTCGAGCAGAACGGTTTGGTATGGGCACCACAACTAATGGATTGGGAGCATCAAATAAGTCAGAGGAGGTGAAGAGAAAGGCTAGAGCTGAGAGATTTGGGCTTCCTGCATCTGTGGCCACTGATGATGAGGCAAAGAAGAAAGCTCGACTTGGTAGGTTTTCTTCAACATCAAAGCCAGACTCCCAGGAGGAAGAAAAGAGGAAAGCAAGGGCAATCAGGTTTTCTAATCCAACATCAAACTCCCTCACACAAGTGGATGGGAAGGGAAACATTGAGACGATTGCAGATATTGCAGGCAAGGCTGGAGGTGGTGCCTGA

Protein sequence

MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGSDKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSEEVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNSLTQVDGKGNIETIADIAGKAGGGA

Homology

[Close]

BLAST of CmoCh03G004750 vs. ExPASy Swiss-Prot
Match: Q9LZ08 (Protein MODIFIER OF SNC1 11 OS=Arabidopsis thaliana OX=3702 GN=MOS11 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.0e-28
Identity = 84/164 (51.22%), Postives = 109/164 (66.46%), Query Frame = 0


Query: 46  TDGGSSKEGDESKGSDKTS--VEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAER 105
           +D G  KE  +S G   T+    GD  PV D+Q+K+RRAERFG+SV+L+EEEKRNSRAER
Sbjct: 50  SDSGEKKEETDSNGIGSTAGVDSGDISPVDDIQKKIRRAERFGVSVKLTEEEKRNSRAER 109

Query: 106 FG--MGTTTNGLGASNKSEEVKRKARAERFGLPASVATDD----EAKKKARLGRFSSTSK 165
           FG       NG   + K+EE+KRKARA+RFG+P++ +T D    EAKKKARL RF   +K
Sbjct: 110 FGTVAAAVVNGSEGTKKAEELKRKARADRFGVPSATSTTDKTEEEAKKKARLARFGKETK 169

Query: 166 PDSQEEEKRKARAIRFSNPTS-NSLTQVDGKGNIETIADIAGKA 201
            DS EE KRKARA+RFS   S ++ + +  K  I   A ++G A
Sbjct: 170 VDSAEENKRKARALRFSKEASADASSDLPEKQIIGKEAAVSGSA 213

[Close]

BLAST of CmoCh03G004750 vs. ExPASy TrEMBL
Match: A0A6J1GD78 (protein MODIFIER OF SNC1 11-like OS=Cucurbita moschata OX=3662 GN=LOC111453127 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 5.7e-99
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60
           MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS
Sbjct: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60

Query: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
           DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNIETIADIAGKAGGGA 205
           LTQVDGKGNIETIADIAGKAGGGA
Sbjct: 181 LTQVDGKGNIETIADIAGKAGGGA 204

[Close]

BLAST of CmoCh03G004750 vs. ExPASy TrEMBL
Match: A0A6J1IR28 (protein MODIFIER OF SNC1 11-like OS=Cucurbita maxima OX=3661 GN=LOC111477977 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.3e-97
Identity = 202/204 (99.02%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60
           MATVASAGINDISNSKN LGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKE DESKGS
Sbjct: 1   MATVASAGINDISNSKNSLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEMDESKGS 60

Query: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
           DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNIETIADIAGKAGGGA 205
           LTQVDGKGNIETIADIAGKAGGGA
Sbjct: 181 LTQVDGKGNIETIADIAGKAGGGA 204

[Close]

BLAST of CmoCh03G004750 vs. ExPASy TrEMBL
Match: A0A0A0L0R4 (Tho1_MOS11_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G293070 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.9e-86
Identity = 182/204 (89.22%), Postives = 189/204 (92.65%), Query Frame = 0


Query: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60
           MATVA AG+NDISNSKNPLGENPSQTL+ TISSSAQPP SVP SSTDGGSSKEGDESK +
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA 60

Query: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
            K S E DG PVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNK+E
Sbjct: 61  GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGL ASV TDDEAKKKARL RFSSTSKPD QEEEKRKARAIRFSNPT NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQVDGKGNIETIADIAGKAGGGA 205
           LTQVDGKGN+ETIAD+AGK+GGGA
Sbjct: 181 LTQVDGKGNVETIADVAGKSGGGA 204

[Close]

BLAST of CmoCh03G004750 vs. ExPASy TrEMBL
Match: A0A5A7TZD8 (Protein MODIFIER OF SNC1 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001340 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.2e-85
Identity = 181/204 (88.73%), Postives = 188/204 (92.16%), Query Frame = 0


Query: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60
           MATVA AG+NDISNSKNPLGENPSQTL+PTISSSAQ P SVP SSTDGGSSKEGDESK S
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLEPTISSSAQTPASVPPSSTDGGSSKEGDESKCS 60

Query: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
            K S   DG PVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNK+E
Sbjct: 61  GKPSAGDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGL ASV TDDEAKKKARL RFSSTSKPD QEEEKRKARAIRFSNPT NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQVDGKGNIETIADIAGKAGGGA 205
           +TQVDGKGN+ETIAD+AGK+GGGA
Sbjct: 181 VTQVDGKGNVETIADVAGKSGGGA 204

[Close]

BLAST of CmoCh03G004750 vs. ExPASy TrEMBL
Match: A0A1S3BHQ8 (protein MODIFIER OF SNC1 11-like OS=Cucumis melo OX=3656 GN=LOC103489757 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.2e-85
Identity = 181/204 (88.73%), Postives = 188/204 (92.16%), Query Frame = 0


Query: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60
           MATVA AG+NDISNSKNPLGENPSQTL+PTISSSAQ P SVP SSTDGGSSKEGDESK S
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLEPTISSSAQTPASVPPSSTDGGSSKEGDESKCS 60

Query: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
            K S   DG PVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNK+E
Sbjct: 61  GKPSAGDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGL ASV TDDEAKKKARL RFSSTSKPD QEEEKRKARAIRFSNPT NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQVDGKGNIETIADIAGKAGGGA 205
           +TQVDGKGN+ETIAD+AGK+GGGA
Sbjct: 181 VTQVDGKGNVETIADVAGKSGGGA 204

[Close]

BLAST of CmoCh03G004750 vs. NCBI nr
Match: XP_022949856.1 (protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >XP_022949857.1 protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >XP_022949858.1 protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >KAG6603695.1 Protein MODIFIER OF SNC1 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033871.1 Protein MODIFIER OF SNC1 11 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 370.2 bits (949), Expect = 1.2e-98
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60
           MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS
Sbjct: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60

Query: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
           DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNIETIADIAGKAGGGA 205
           LTQVDGKGNIETIADIAGKAGGGA
Sbjct: 181 LTQVDGKGNIETIADIAGKAGGGA 204

[Close]

BLAST of CmoCh03G004750 vs. NCBI nr
Match: XP_022977777.1 (protein MODIFIER OF SNC1 11-like [Cucurbita maxima] >XP_022977778.1 protein MODIFIER OF SNC1 11-like [Cucurbita maxima] >XP_022977779.1 protein MODIFIER OF SNC1 11-like [Cucurbita maxima])

HSP 1 Score: 363.6 bits (932), Expect = 1.1e-96
Identity = 202/204 (99.02%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60
           MATVASAGINDISNSKN LGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKE DESKGS
Sbjct: 1   MATVASAGINDISNSKNSLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEMDESKGS 60

Query: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
           DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNIETIADIAGKAGGGA 205
           LTQVDGKGNIETIADIAGKAGGGA
Sbjct: 181 LTQVDGKGNIETIADIAGKAGGGA 204

[Close]

BLAST of CmoCh03G004750 vs. NCBI nr
Match: XP_023543781.1 (protein MODIFIER OF SNC1 11-like [Cucurbita pepo subsp. pepo] >XP_023543782.1 protein MODIFIER OF SNC1 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.2 bits (918), Expect = 4.6e-95
Identity = 199/204 (97.55%), Postives = 200/204 (98.04%), Query Frame = 0


Query: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60
           MATVAS+GINDISNSKNPLGENPSQTLDPTISSSAQPP SVPLSSTDG SSKEGDESKGS
Sbjct: 1   MATVASSGINDISNSKNPLGENPSQTLDPTISSSAQPPASVPLSSTDGESSKEGDESKGS 60

Query: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
           DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE
Sbjct: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120

Query: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSN TSNS
Sbjct: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNLTSNS 180

Query: 181 LTQVDGKGNIETIADIAGKAGGGA 205
           LTQ DGKGNIETIADIAGKAGGGA
Sbjct: 181 LTQEDGKGNIETIADIAGKAGGGA 204

[Close]

BLAST of CmoCh03G004750 vs. NCBI nr
Match: XP_038882639.1 (protein MODIFIER OF SNC1 11 [Benincasa hispida])

HSP 1 Score: 335.9 bits (860), Expect = 2.5e-88
Identity = 185/204 (90.69%), Postives = 192/204 (94.12%), Query Frame = 0


Query: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60
           MATVASAG+NDISNSK+PLGENPSQTLDPTISSSAQPP SVP SSTDGGSSK+ DESKGS
Sbjct: 1   MATVASAGLNDISNSKSPLGENPSQTLDPTISSSAQPPASVPSSSTDGGSSKDRDESKGS 60

Query: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
            K SVEGDG PVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGT TNGLGASNK+E
Sbjct: 61  GKASVEGDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTATNGLGASNKTE 120

Query: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGL ASV TDDEAKKKARL RFSSTSKPD QEEEKRKARAIRFSNPTSNS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTSNS 180

Query: 181 LTQVDGKGNIETIADIAGKAGGGA 205
            TQ+DGKGN+ETIAD+AGKAGGGA
Sbjct: 181 PTQMDGKGNVETIADVAGKAGGGA 204

[Close]

BLAST of CmoCh03G004750 vs. NCBI nr
Match: XP_031740008.1 (protein MODIFIER OF SNC1 11 [Cucumis sativus] >KGN54197.1 hypothetical protein Csa_017918 [Cucumis sativus])

HSP 1 Score: 328.6 bits (841), Expect = 3.9e-86
Identity = 182/204 (89.22%), Postives = 189/204 (92.65%), Query Frame = 0


Query: 1   MATVASAGINDISNSKNPLGENPSQTLDPTISSSAQPPVSVPLSSTDGGSSKEGDESKGS 60
           MATVA AG+NDISNSKNPLGENPSQTL+ TISSSAQPP SVP SSTDGGSSKEGDESK +
Sbjct: 1   MATVAPAGLNDISNSKNPLGENPSQTLETTISSSAQPPASVPPSSTDGGSSKEGDESKCA 60

Query: 61  DKTSVEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKSE 120
            K S E DG PVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNK+E
Sbjct: 61  GKPSAEDDGAPVSDVQRKMRRAERFGISVQLSEEEKRNSRAERFGMGTTTNGLGASNKTE 120

Query: 121 EVKRKARAERFGLPASVATDDEAKKKARLGRFSSTSKPDSQEEEKRKARAIRFSNPTSNS 180
           EVKRKARAERFGL ASV TDDEAKKKARL RFSSTSKPD QEEEKRKARAIRFSNPT NS
Sbjct: 121 EVKRKARAERFGLSASVTTDDEAKKKARLARFSSTSKPDPQEEEKRKARAIRFSNPTPNS 180

Query: 181 LTQVDGKGNIETIADIAGKAGGGA 205
           LTQVDGKGN+ETIAD+AGK+GGGA
Sbjct: 181 LTQVDGKGNVETIADVAGKSGGGA 204

[Close]

BLAST of CmoCh03G004750 vs. TAIR 10
Match: AT5G02770.1 (unknown protein; Has 469 Blast hits to 336 proteins in 126 species: Archae - 0; Bacteria - 54; Metazoa - 249; Fungi - 22; Plants - 47; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). )

HSP 1 Score: 126.7 bits (317), Expect = 2.1e-29
Identity = 84/164 (51.22%), Postives = 109/164 (66.46%), Query Frame = 0


Query: 46  TDGGSSKEGDESKGSDKTS--VEGDGEPVSDVQRKMRRAERFGISVQLSEEEKRNSRAER 105
           +D G  KE  +S G   T+    GD  PV D+Q+K+RRAERFG+SV+L+EEEKRNSRAER
Sbjct: 50  SDSGEKKEETDSNGIGSTAGVDSGDISPVDDIQKKIRRAERFGVSVKLTEEEKRNSRAER 109

Query: 106 FG--MGTTTNGLGASNKSEEVKRKARAERFGLPASVATDD----EAKKKARLGRFSSTSK 165
           FG       NG   + K+EE+KRKARA+RFG+P++ +T D    EAKKKARL RF   +K
Sbjct: 110 FGTVAAAVVNGSEGTKKAEELKRKARADRFGVPSATSTTDKTEEEAKKKARLARFGKETK 169

Query: 166 PDSQEEEKRKARAIRFSNPTS-NSLTQVDGKGNIETIADIAGKA 201
            DS EE KRKARA+RFS   S ++ + +  K  I   A ++G A
Sbjct: 170 VDSAEENKRKARALRFSKEASADASSDLPEKQIIGKEAAVSGSA 213

The following BLAST results are available for this feature:

BLAST of CmoCh03G004750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZ08	3.0e-28	51.22	Protein MODIFIER OF SNC1 11 OS=Arabidopsis thaliana OX=3702 GN=MOS11 PE=1 SV=1	[more]

BLAST of CmoCh03G004750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GD78	5.7e-99	100.00	protein MODIFIER OF SNC1 11-like OS=Cucurbita moschata OX=3662 GN=LOC111453127 P...	[more]
A0A6J1IR28	5.3e-97	99.02	protein MODIFIER OF SNC1 11-like OS=Cucurbita maxima OX=3661 GN=LOC111477977 PE=...	[more]
A0A0A0L0R4	1.9e-86	89.22	Tho1_MOS11_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G29307...	[more]
A0A5A7TZD8	1.2e-85	88.73	Protein MODIFIER OF SNC1 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3BHQ8	1.2e-85	88.73	protein MODIFIER OF SNC1 11-like OS=Cucumis melo OX=3656 GN=LOC103489757 PE=4 SV...	[more]

BLAST of CmoCh03G004750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949856.1	1.2e-98	100.00	protein MODIFIER OF SNC1 11-like [Cucurbita moschata] >XP_022949857.1 protein MO...	[more]
XP_022977777.1	1.1e-96	99.02	protein MODIFIER OF SNC1 11-like [Cucurbita maxima] >XP_022977778.1 protein MODI...	[more]
XP_023543781.1	4.6e-95	97.55	protein MODIFIER OF SNC1 11-like [Cucurbita pepo subsp. pepo] >XP_023543782.1 pr...	[more]
XP_038882639.1	2.5e-88	90.69	protein MODIFIER OF SNC1 11 [Benincasa hispida]	[more]
XP_031740008.1	3.9e-86	89.22	protein MODIFIER OF SNC1 11 [Cucumis sativus] >KGN54197.1 hypothetical protein C...	[more]

BLAST of CmoCh03G004750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02770.1	2.1e-29	51.22	unknown protein; Has 469 Blast hits to 336 proteins in 126 species: Archae - 0; ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040746	THO1_MOS11, C-terminal domain	PFAM	PF18592	Tho1_MOS11_C	coord: 74..105 e-value: 4.0E-11 score: 42.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 6..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..186
IPR044209	Protein MODIFIER OF SNC1 11	PANTHER	PTHR47701	PROTEIN MODIFIER OF SNC1 11	coord: 17..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G004750.1	CmoCh03G004750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016973	poly(A)+ mRNA export from nucleus
cellular_component	GO:0005634	nucleus