CmoCh03G004740 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh03G004740
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionZinc finger CCHC domain-containing protein 10
LocationCmo_Chr03: 5167783 .. 5168755 (+)
RNA-Seq ExpressionCmoCh03G004740
SyntenyCmoCh03G004740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTCTGCACTGAGAGGCAAAGAAAATGATGGCTACTTGCAAAGAAAACAGACAATGAAATGGATTTGGTTGCTTGCAGTGGAAAGAAAATGAAAGTTGGGAAGGGTTTGAAAACTTTGGATTGCTTAAGGGGAAGATTGCTTGCAGAAAGACAAGCTTCAAGATCAGCCAAAGAAGAGGCTCAGCTTATGGGGGAAAAGGTAATGTTCTTCACCATTGTTCACATTCTGCATTTCTTTTTCCAATGTGTGATTTTCACGAGGTTTTTTCTGGTGTTCTGAAGTTGATAGAGTTGGAGAATCAGATTAGAAAGGAGACAGAGCTGAGGAACAAAGCTGAGAAGAGGCTTAAACTCTTGATAAAGAAGCTTGAATCCTTCAACATTGCCTCCTCAACATCATTAGTAGCCTCAGAAATTTGGACAAATTTCTCAGCCTTAAAGGAAACAGAAAACCAAGAATCAAGATCAGAGAATGTGGAATCAACGATCTCGAAAAATCAATGCGAGAAAGTTCCAGAAATCGCCACATCCAAACAGCGCGATGAGAAAGAACCTAATCAGAATACTCCAGATCGAGCAAATTCAAGCCCTAACTCCGAATCTCGCAACAATTCCTGCACCGATCCCCGCCGATCTTCTCAAATCCCTCAAAGAAAAGATCAGAGGTACTAAAATTCCCGCTCCCGCTCCCCCTCAAACTCGCAAAACTTCACCATTTACATATGAATTAACCTAAGCACCGCCCTAATTACGATTACAATTGTTTCAAGCTTTTCAGGATAAGTAAAGGAGAAAGAGAACAAGCATTACACTGATAATTTGATAGCATCTGTTCCCGGAGCGACGCCGGCGGCGAACTCAAAGACGGGGGCGATGAAGATGAAAGCAATCCACGAGAGGGCAACAGAAGTTCATGATGCTCCAAAGCACATAGAGGAAATGTCCAGAACTCATTTAAATTATAGAAATTAG

mRNA sequence

TTTTCTGCACTGAGAGGCAAAGAAAATGATGGCTACTTGCAAAGAAAACAGACAATGAAATGGATTTGGTTGCTTGCAGTGGAAAGAAAATGAAAGTTGGGAAGGGTTTGAAAACTTTGGATTGCTTAAGGGGAAGATTGCTTGCAGAAAGACAAGCTTCAAGATCAGCCAAAGAAGAGGCTCAGCTTATGGGGGAAAAGTTGATAGAGTTGGAGAATCAGATTAGAAAGGAGACAGAGCTGAGGAACAAAGCTGAGAAGAGGCTTAAACTCTTGATAAAGAAGCTTGAATCCTTCAACATTGCCTCCTCAACATCATTAGTAGCCTCAGAAATTTGGACAAATTTCTCAGCCTTAAAGGAAACAGAAAACCAAGAATCAAGATCAGAGAATGTGGAATCAACGATCTCGAAAAATCAATGCGAGAAAGTTCCAGAAATCGCCACATCCAAACAGCGCGATGAGAAAGAACCTAATCAGAATACTCCAGATCGAGCAAATTCAAGCCCTAACTCCGAATCTCGCAACAATTCCTGCACCGATCCCCGCCGATCTTCTCAAATCCCTCAAAGAAAAGATCAGAGCACCGCCCTAATTACGATTACAATTGAGAAAGAGAACAAGCATTACACTGATAATTTGATAGCATCTGTTCCCGGAGCGACGCCGGCGGCGAACTCAAAGACGGGGGCGATGAAGATGAAAGCAATCCACGAGAGGGCAACAGAAGTTCATGATGCTCCAAAGCACATAGAGGAAATGTCCAGAACTCATTTAAATTATAGAAATTAG

Coding sequence (CDS)

ATGGATTTGGTTGCTTGCAGTGGAAAGAAAATGAAAGTTGGGAAGGGTTTGAAAACTTTGGATTGCTTAAGGGGAAGATTGCTTGCAGAAAGACAAGCTTCAAGATCAGCCAAAGAAGAGGCTCAGCTTATGGGGGAAAAGTTGATAGAGTTGGAGAATCAGATTAGAAAGGAGACAGAGCTGAGGAACAAAGCTGAGAAGAGGCTTAAACTCTTGATAAAGAAGCTTGAATCCTTCAACATTGCCTCCTCAACATCATTAGTAGCCTCAGAAATTTGGACAAATTTCTCAGCCTTAAAGGAAACAGAAAACCAAGAATCAAGATCAGAGAATGTGGAATCAACGATCTCGAAAAATCAATGCGAGAAAGTTCCAGAAATCGCCACATCCAAACAGCGCGATGAGAAAGAACCTAATCAGAATACTCCAGATCGAGCAAATTCAAGCCCTAACTCCGAATCTCGCAACAATTCCTGCACCGATCCCCGCCGATCTTCTCAAATCCCTCAAAGAAAAGATCAGAGCACCGCCCTAATTACGATTACAATTGAGAAAGAGAACAAGCATTACACTGATAATTTGATAGCATCTGTTCCCGGAGCGACGCCGGCGGCGAACTCAAAGACGGGGGCGATGAAGATGAAAGCAATCCACGAGAGGGCAACAGAAGTTCATGATGCTCCAAAGCACATAGAGGAAATGTCCAGAACTCATTTAAATTATAGAAATTAG

Protein sequence

MDLVACSGKKMKVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPRRSSQIPQRKDQSTALITITIEKENKHYTDNLIASVPGATPAANSKTGAMKMKAIHERATEVHDAPKHIEEMSRTHLNYRN
Homology
BLAST of CmoCh03G004740 vs. ExPASy TrEMBL
Match: A0A6J1GE52 (uncharacterized protein LOC111453128 OS=Cucurbita moschata OX=3662 GN=LOC111453128 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.3e-81
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0

Query: 1   MDLVACSGKKMKVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETE 60
           MDLVACSGKKMKVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETE
Sbjct: 1   MDLVACSGKKMKVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETE 60

Query: 61  LRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQ 120
           LRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQ
Sbjct: 61  LRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQ 120

Query: 121 CEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPRRSSQIPQRKDQ 175
           CEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPRRSSQIPQRKDQ
Sbjct: 121 CEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPRRSSQIPQRKDQ 174

BLAST of CmoCh03G004740 vs. ExPASy TrEMBL
Match: A0A1S3BHR6 (uncharacterized protein LOC103489769 OS=Cucumis melo OX=3656 GN=LOC103489769 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 3.3e-69
Identity = 164/238 (68.91%), Postives = 185/238 (77.73%), Query Frame = 0

Query: 7   SGKKMKVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAE 66
           SG KM V KGLKTL+CLRGRLLAERQASRSAKEEA+LMGEKL++LENQIRKETELRNKAE
Sbjct: 12  SGNKMDVEKGLKTLECLRGRLLAERQASRSAKEEAELMGEKLLKLENQIRKETELRNKAE 71

Query: 67  KRLKLLIKKLESFNIAS-STSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVP 126
           KRL+LLIKKLES N AS S +  ASEI TN S  KETE+QE +SE + STI +NQC+K+ 
Sbjct: 72  KRLELLIKKLESLNNASTSVTSTASEISTNSSPSKETESQELKSEKLVSTIPENQCQKIL 131

Query: 127 EIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPRRSSQIPQRKDQSTALITITIEK 186
            I TSKQ DEK+PN+NTPDR NS PNSES NN   DPR +S+IP  KDQS ++      K
Sbjct: 132 NITTSKQHDEKKPNRNTPDRLNSIPNSESPNNFYIDPRHTSEIPHTKDQSFSVEV----K 191

Query: 187 ENKHYTDNLIASVPGATPAANSKTGAMKMKAIHERATEVHDAPKHIEEMSRTHLNYRN 244
           E KHY DNL  SVPGA P ANS+TGAMKMK IHERATEVHDA KHI    ++    RN
Sbjct: 192 ERKHYIDNLAESVPGAAPMANSETGAMKMKEIHERATEVHDALKHIRGNVQSSFERRN 245

BLAST of CmoCh03G004740 vs. ExPASy TrEMBL
Match: A0A5A7TZE9 (Zinc finger CCHC domain-containing protein 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001350 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 3.3e-69
Identity = 164/238 (68.91%), Postives = 185/238 (77.73%), Query Frame = 0

Query: 7   SGKKMKVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAE 66
           SG KM V KGLKTL+CLRGRLLAERQASRSAKEEA+LMGEKL++LENQIRKETELRNKAE
Sbjct: 12  SGNKMDVEKGLKTLECLRGRLLAERQASRSAKEEAELMGEKLLKLENQIRKETELRNKAE 71

Query: 67  KRLKLLIKKLESFNIAS-STSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVP 126
           KRL+LLIKKLES N AS S +  ASEI TN S  KETE+QE +SE + STI +NQC+K+ 
Sbjct: 72  KRLELLIKKLESLNNASTSVTSTASEISTNSSPSKETESQELKSEKLVSTIPENQCQKIL 131

Query: 127 EIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPRRSSQIPQRKDQSTALITITIEK 186
            I TSKQ DEK+PN+NTPDR NS PNSES NN   DPR +S+IP  KDQS ++      K
Sbjct: 132 NITTSKQHDEKKPNRNTPDRLNSIPNSESPNNFYIDPRHTSEIPHTKDQSFSVEV----K 191

Query: 187 ENKHYTDNLIASVPGATPAANSKTGAMKMKAIHERATEVHDAPKHIEEMSRTHLNYRN 244
           E KHY DNL  SVPGA P ANS+TGAMKMK IHERATEVHDA KHI    ++    RN
Sbjct: 192 ERKHYIDNLAESVPGAAPMANSETGAMKMKEIHERATEVHDALKHIRGNVQSSFERRN 245

BLAST of CmoCh03G004740 vs. ExPASy TrEMBL
Match: A0A6J1INA8 (uncharacterized protein LOC111477978 OS=Cucurbita maxima OX=3661 GN=LOC111477978 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 8.1e-68
Identity = 157/180 (87.22%), Postives = 163/180 (90.56%), Query Frame = 0

Query: 1   MDLVACSGKKMKVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETE 60
           MDLVAC GKKM+VGKGLKTLDCLRGRLLAER+ASRSAKEEAQLM EKLIELENQ RKETE
Sbjct: 1   MDLVACRGKKMEVGKGLKTLDCLRGRLLAEREASRSAKEEAQLMEEKLIELENQNRKETE 60

Query: 61  LRNKAEKRLKLLIKKLESFNIASSTSLVASEI------WTNFSALKETENQESRSENVES 120
           LRNKAEKRLKLLIKKLES NIASSTSLVASEI       TN S LKETENQESRS+ V+S
Sbjct: 61  LRNKAEKRLKLLIKKLESLNIASSTSLVASEISTLSESSTNSSTLKETENQESRSKKVDS 120

Query: 121 TISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPRRSSQIPQRKDQ 175
           TIS+NQCEKVPEIATSKQRDEK+PNQNTPDRANSSPNSES NNSCTDP RSSQI QRKDQ
Sbjct: 121 TISENQCEKVPEIATSKQRDEKKPNQNTPDRANSSPNSESPNNSCTDPHRSSQILQRKDQ 180

BLAST of CmoCh03G004740 vs. ExPASy TrEMBL
Match: A0A0A0KXC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293080 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 5.8e-66
Identity = 160/238 (67.23%), Postives = 183/238 (76.89%), Query Frame = 0

Query: 7   SGKKMKVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAE 66
           SG KM+V KGLKTL+CLRGRLLAERQASRSAKEEA+LMGEKL++LENQI+KETELRNKAE
Sbjct: 12  SGNKMEVDKGLKTLECLRGRLLAERQASRSAKEEAELMGEKLLKLENQIKKETELRNKAE 71

Query: 67  KRLKLLIKKLESFNIAS-STSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVP 126
           KRLKLLIKKLES N AS S +  ASEI TN S     E+QES+SE + STI KNQC+K+ 
Sbjct: 72  KRLKLLIKKLESLNNASTSVTSTASEISTNSS----PESQESKSEKLVSTIPKNQCQKIL 131

Query: 127 EIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPRRSSQIPQRKDQSTALITITIEK 186
            I TSK  DEK+PN+N P R NSSPNSES NNS  DP+ +S+IP  KDQS ++      K
Sbjct: 132 NITTSKPHDEKKPNRNAPYRLNSSPNSESPNNSYIDPQHTSEIPHTKDQSFSVEV----K 191

Query: 187 ENKHYTDNLIASVPGATPAANSKTGAMKMKAIHERATEVHDAPKHIEEMSRTHLNYRN 244
           E +HY DNL  SVPGA P ANS+TGAMKMK IHERATEVHDA KHI    ++    RN
Sbjct: 192 EREHYIDNLAESVPGAAPVANSETGAMKMKEIHERATEVHDALKHIRGNVQSSFERRN 241

BLAST of CmoCh03G004740 vs. NCBI nr
Match: XP_022949859.1 (uncharacterized protein LOC111453128 [Cucurbita moschata])

HSP 1 Score: 312.8 bits (800), Expect = 2.7e-81
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0

Query: 1   MDLVACSGKKMKVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETE 60
           MDLVACSGKKMKVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETE
Sbjct: 1   MDLVACSGKKMKVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETE 60

Query: 61  LRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQ 120
           LRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQ
Sbjct: 61  LRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQ 120

Query: 121 CEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPRRSSQIPQRKDQ 175
           CEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPRRSSQIPQRKDQ
Sbjct: 121 CEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPRRSSQIPQRKDQ 174

BLAST of CmoCh03G004740 vs. NCBI nr
Match: KAG7033870.1 (hypothetical protein SDJN02_03595 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 309.3 bits (791), Expect = 2.9e-80
Identity = 172/174 (98.85%), Postives = 173/174 (99.43%), Query Frame = 0

Query: 1   MDLVACSGKKMKVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETE 60
           MDLVACSGKKM+VGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETE
Sbjct: 7   MDLVACSGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETE 66

Query: 61  LRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQ 120
           LRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQ
Sbjct: 67  LRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQ 126

Query: 121 CEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPRRSSQIPQRKDQ 175
           CEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDP RSSQIPQRKDQ
Sbjct: 127 CEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQ 180

BLAST of CmoCh03G004740 vs. NCBI nr
Match: KAG6603693.1 (hypothetical protein SDJN03_04302, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 289.3 bits (739), Expect = 3.1e-74
Identity = 162/164 (98.78%), Postives = 163/164 (99.39%), Query Frame = 0

Query: 11  MKVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK 70
           M+VGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK
Sbjct: 1   MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK 60

Query: 71  LLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVPEIATS 130
           LLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVPEIATS
Sbjct: 61  LLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVPEIATS 120

Query: 131 KQRDEKEPNQNTPDRANSSPNSESRNNSCTDPRRSSQIPQRKDQ 175
           KQRDEKEPNQNTPDRANSSPNSESRNNSCTDP RSSQIPQRKDQ
Sbjct: 121 KQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQ 164

BLAST of CmoCh03G004740 vs. NCBI nr
Match: XP_038881375.1 (uncharacterized protein LOC120072916 isoform X1 [Benincasa hispida])

HSP 1 Score: 288.9 bits (738), Expect = 4.1e-74
Identity = 174/242 (71.90%), Postives = 199/242 (82.23%), Query Frame = 0

Query: 6   CSGKKMKVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKA 65
           CSG KM+VGKGLKTL+CLRGRLLAERQASRSAKEEA++MGEKL++LENQIRKETELRNKA
Sbjct: 13  CSGNKMEVGKGLKTLECLRGRLLAERQASRSAKEEAEVMGEKLLKLENQIRKETELRNKA 72

Query: 66  EKRLKLLIKKLESFNIASS--TSLVA--SEIWTNFSALKETENQESRSENVESTISKNQC 125
           EKRLKLLIKKLES NIAS+  TS ++  SEI TN S  KETE+QESRSEN+ STI + QC
Sbjct: 73  EKRLKLLIKKLESLNIASTSVTSEISTLSEISTNSS--KETESQESRSENLVSTIPETQC 132

Query: 126 EKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPRRSSQIPQRKDQSTALITI 185
           EKV +I TSKQRDEK+PN+N PDR NSS NSES NNS  DP RSSQIPQRKD+S ++  +
Sbjct: 133 EKVLDITTSKQRDEKKPNRNAPDRLNSSHNSESHNNSYADPHRSSQIPQRKDESFSVEEV 192

Query: 186 TIEKENKHYTDNLIASVPGATPAANSKTGAMKMKAIHERATEVHDAPKHIEEMSRTHLNY 244
              KE +HY DN++ASVPGA PAANS+T AMKMK IHERATEVHDA KHI    ++    
Sbjct: 193 ---KEREHYIDNVVASVPGAAPAANSETRAMKMKEIHERATEVHDALKHIRGNVQSSFEI 249

BLAST of CmoCh03G004740 vs. NCBI nr
Match: XP_023543783.1 (uncharacterized protein LOC111803551 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.1 bits (736), Expect = 7.0e-74
Identity = 166/181 (91.71%), Postives = 171/181 (94.48%), Query Frame = 0

Query: 1   MDLVACSGKKMKVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETE 60
           MDLVACSGKKM+VGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIR+ETE
Sbjct: 1   MDLVACSGKKMEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRRETE 60

Query: 61  LRNKAEKRLKLLIKKLESFNIASSTSLVASEI------WTNFSALKETENQESRSENVES 120
           LRNKAEKRLKLLIKKLES NIASSTSLVASEI       TN SALKETENQESRSENV+S
Sbjct: 61  LRNKAEKRLKLLIKKLESLNIASSTSLVASEISTLSDSSTNSSALKETENQESRSENVDS 120

Query: 121 TISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPRRSSQIPQRKDQ 176
           TIS+NQCEKVPEIATSKQRDEK+PNQNTPDRANSSPNSESRNNSCTDP RSSQIPQRKDQ
Sbjct: 121 TISENQCEKVPEIATSKQRDEKKPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQ 180

BLAST of CmoCh03G004740 vs. TAIR 10
Match: AT2G37300.1 (unknown protein; Has 93 Blast hits to 62 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi - 19; Plants - 25; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). )

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-14
Identity = 57/134 (42.54%), Postives = 81/134 (60.45%), Query Frame = 0

Query: 15  KGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIK 74
           +G +T++CLRGRLLAERQ SRSAKEEA+L+  K+ ELE  +++E  LR KAEKRLKLL+K
Sbjct: 9   EGQRTVECLRGRLLAERQVSRSAKEEAELITRKMEELERNLKEEIRLREKAEKRLKLLMK 68

Query: 75  KLE-------SFNIASSTSLVASEIWTNFSALKETENQES----------RSENVESTIS 132
           KLE       S   +SS     S + T+ S  +E E  +S           +ENV ST  
Sbjct: 69  KLEFIKGSRSSEGSSSSEVSCISSVCTSASKEEEEETHDSGAVDEGKTDHATENVASTEE 128

BLAST of CmoCh03G004740 vs. TAIR 10
Match: AT2G37300.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages. )

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-14
Identity = 57/134 (42.54%), Postives = 81/134 (60.45%), Query Frame = 0

Query: 15  KGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIK 74
           +G +T++CLRGRLLAERQ SRSAKEEA+L+  K+ ELE  +++E  LR KAEKRLKLL+K
Sbjct: 88  EGQRTVECLRGRLLAERQVSRSAKEEAELITRKMEELERNLKEEIRLREKAEKRLKLLMK 147

Query: 75  KLE-------SFNIASSTSLVASEIWTNFSALKETENQES----------RSENVESTIS 132
           KLE       S   +SS     S + T+ S  +E E  +S           +ENV ST  
Sbjct: 148 KLEFIKGSRSSEGSSSSEVSCISSVCTSASKEEEEETHDSGAVDEGKTDHATENVASTEE 207

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GE521.3e-81100.00uncharacterized protein LOC111453128 OS=Cucurbita moschata OX=3662 GN=LOC1114531... [more]
A0A1S3BHR63.3e-6968.91uncharacterized protein LOC103489769 OS=Cucumis melo OX=3656 GN=LOC103489769 PE=... [more]
A0A5A7TZE93.3e-6968.91Zinc finger CCHC domain-containing protein 10 OS=Cucumis melo var. makuwa OX=119... [more]
A0A6J1INA88.1e-6887.22uncharacterized protein LOC111477978 OS=Cucurbita maxima OX=3661 GN=LOC111477978... [more]
A0A0A0KXC45.8e-6667.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293080 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022949859.12.7e-81100.00uncharacterized protein LOC111453128 [Cucurbita moschata][more]
KAG7033870.12.9e-8098.85hypothetical protein SDJN02_03595 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6603693.13.1e-7498.78hypothetical protein SDJN03_04302, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038881375.14.1e-7471.90uncharacterized protein LOC120072916 isoform X1 [Benincasa hispida][more]
XP_023543783.17.0e-7491.71uncharacterized protein LOC111803551 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT2G37300.11.3e-1442.54unknown protein; Has 93 Blast hits to 62 proteins in 29 species: Archae - 0; Bac... [more]
AT2G37300.21.3e-1442.54unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 34..82
NoneNo IPR availableCOILSCoilCoilcoord: 231..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..176
NoneNo IPR availablePANTHERPTHR33701TRANSMEMBRANE PROTEINcoord: 6..184
NoneNo IPR availablePANTHERPTHR33701:SF2TRANSMEMBRANE PROTEINcoord: 6..184

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G004740.1CmoCh03G004740.1mRNA