CmoCh03G004520 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh03G004520
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionActin-depolymerizing factor
LocationCmo_Chr03: 5058216 .. 5060082 (-)
RNA-Seq ExpressionCmoCh03G004520
SyntenyCmoCh03G004520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCGACTTCAAGAAAAGGAAGAGAAGCTCATCATCGTCTCCAACAGGGTTTTTGCAGTTTACACCAACACGATACGCTCCTCTGTTATTTGAATCACTCCCACCATAATTACCACTCCCAACCACCCAATATAACCTTTCCCCCGCATTCACTCATTCATTCCTCTCTTCTCTTCATTCTTCGATTTCACTGTTGTTTGAGTTCTTCCGCGAGCATCCGAGGAGAAAAAATGGTAACCCTTCGATTCATTTGCTTCATTTGTAGCTTCCCAAGTGTTTGATTAAATGACCTGTTCTGTTTCTGGGGAAGTTCTGGGAAATTGCTGGAATGGGTTTCTGGGAAATGTGGCTTTGTTGATTAGCTTCTCTTTTGGTTCTATTTGGTGTTTGATCTGTGGTTCTGACTTGACTGGAATTTTTTGAATGTGTTTGGATTGGGTTGATTTATAATAATAGTTCATGAATTGTTTTGGTGTGTAATGTTTTGCTCTGAGATCTTGGGATATGATCTGGTTTGTGTTGGAATGATTTTATGTTTGAAACTATGGGATGGTTTAGTTTTATGATCGGTCGAGCTGGAGAATTTCCATCTGGTTCTGTATCCATTGCTCTTATCTTAATTATCTCTTGTGATGAACAGGGGTCCTCCTTTTAGTATTTTACTTCCCCCCTCCCCCCTTTTAGATTCAATCTTCCTTTCAAAGTTGTATGGAGTTTTGTTGTTGCAAGGAGGCACCCACCACTCGTAGATATTCTATGCTTTGACCCATTACGTATTTTCGTCACTCTTGGTAGGGAAAGGATTCCACACTCTTATATGTGTGATCGTCACTATATAGAATGCTTCCTTTCCTTTTCCAACCTATGGGAAAGGTTTCCACACTCTTATATGTGTGATCGTCACTATATAGAATGCTCCTTTCCTTCTCAAACCTACGGGAAAGGTTTCCACACTCTTATACGTGTGATCGTCACTATATAGAATGCTTCCTTTCCTTCTCCAACCTGTGTGTGATCGCACAATCCACACCCTTACGTATCGCTGGCGGCGATACGTAATGGGCTAAAGTGGACAATATCTATTGGCGGTGGGCTTGAGTTGTCACATGAAGTGTGTGTGTTTTGGGTGTCAATCAACCTTCTCAGTGATACGTAACGGGCTAAACCGGATAATATCTACTAGCGGTAGGCTTGAGTTGTTACGAGCGATAGGTAATGGGTAGGCTTGAATTGAATTGTTACATGAATGTGTGTGTTTTGTGTGTCAGTCAACCTTCTCTTTTATTGCATAATCTTGTCTTCAAGTTAGAAGATACTTTAAAAGGTGATCAAATATTACAAACTTAGCTTAAAAAATATACTTTCATGAATCTGGTAGGCCAATGCAGCATCAGGAATGGCTGTGAATGATGAATGCAAGTTAAAGTTTCTAGAGCTCAAGTCGAAAAGAACTCATCGTTTCATTATCTTTAAGATCGAGGAGAAGCTAAAGCAAGTAGTTGTGGAGAAACTCGGTGGGCCTAGCCAAAGTTACGAGGATTTTGCTGCTAGTCTCCCTACCGATGAGTGTCGTTATGCTGTCTATGATTTCGACTTCGTCACCGAAGAAAATTGCCAAAAAAGCAGAATCTTCTTCATTGCATGGTAATGCCAATTCTTAACCATTCAATGATTGCATACTTCATCTTATCACTGATTGAACTGTTAAATGAAGGTCTCCTGATAATTCAAGAGTCAGAAGCAAGATGATCTATGCAAGCTCCAAGGACAGATTTAAGAGAGAGCTTGATGGAATACAAGTAGAGCTGCAAGCAACCGATCCGACCGAGATGGGTCTCGATGTAATTCGTAGCCGTGCTGGAATATAA

mRNA sequence

GCCGACTTCAAGAAAAGGAAGAGAAGCTCATCATCGTCTCCAACAGGGTTTTTGCAGTTTACACCAACACGATACGCTCCTCTGTTATTTGAATCACTCCCACCATAATTACCACTCCCAACCACCCAATATAACCTTTCCCCCGCATTCACTCATTCATTCCTCTCTTCTCTTCATTCTTCGATTTCACTGTTGTTTGAGTTCTTCCGCGAGCATCCGAGGAGAAAAAATGGCCAATGCAGCATCAGGAATGGCTGTGAATGATGAATGCAAGTTAAAGTTTCTAGAGCTCAAGTCGAAAAGAACTCATCGTTTCATTATCTTTAAGATCGAGGAGAAGCTAAAGCAAGTAGTTGTGGAGAAACTCGGTGGGCCTAGCCAAAGTTACGAGGATTTTGCTGCTAGTCTCCCTACCGATGAGTGTCGTTATGCTGTCTATGATTTCGACTTCGTCACCGAAGAAAATTGCCAAAAAAGCAGAATCTTCTTCATTGCATGGTCTCCTGATAATTCAAGAGTCAGAAGCAAGATGATCTATGCAAGCTCCAAGGACAGATTTAAGAGAGAGCTTGATGGAATACAAGTAGAGCTGCAAGCAACCGATCCGACCGAGATGGGTCTCGATGTAATTCGTAGCCGTGCTGGAATATAA

Coding sequence (CDS)

ATGGCCAATGCAGCATCAGGAATGGCTGTGAATGATGAATGCAAGTTAAAGTTTCTAGAGCTCAAGTCGAAAAGAACTCATCGTTTCATTATCTTTAAGATCGAGGAGAAGCTAAAGCAAGTAGTTGTGGAGAAACTCGGTGGGCCTAGCCAAAGTTACGAGGATTTTGCTGCTAGTCTCCCTACCGATGAGTGTCGTTATGCTGTCTATGATTTCGACTTCGTCACCGAAGAAAATTGCCAAAAAAGCAGAATCTTCTTCATTGCATGGTCTCCTGATAATTCAAGAGTCAGAAGCAAGATGATCTATGCAAGCTCCAAGGACAGATTTAAGAGAGAGCTTGATGGAATACAAGTAGAGCTGCAAGCAACCGATCCGACCGAGATGGGTCTCGATGTAATTCGTAGCCGTGCTGGAATATAA

Protein sequence

MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASLPTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVIRSRAGI
Homology
[Close]
BLAST of CmoCh03G004520 vs. ExPASy Swiss-Prot
Match: Q9FVI2 (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 6.7e-64
Identity = 119/138 (86.23%), Postives = 131/138 (94.93%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHRFI++KIEEK KQVVVEK+G P++SYEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P +ECRYAVYDFDFVT ENCQKSRIFFIAW PD +RVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQA DPTEMGLDVI+SRA
Sbjct: 121 LQACDPTEMGLDVIQSRA 138

[Close]
BLAST of CmoCh03G004520 vs. ExPASy Swiss-Prot
Match: Q9FVI1 (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 6.7e-64
Identity = 120/139 (86.33%), Postives = 131/139 (94.24%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKLKFLELK+KRT+RFII+KIEEK K+VVVEKLG P++SYEDF A L
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYAVYDFDF+T+EN QKSRIFFIAWSPD +RVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAG 140
           LQATDPTEMGLDV RSRAG
Sbjct: 121 LQATDPTEMGLDVFRSRAG 139

[Close]
BLAST of CmoCh03G004520 vs. ExPASy Swiss-Prot
Match: Q0DLA3 (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 PE=3 SV=2)

HSP 1 Score: 238.8 bits (608), Expect = 3.7e-62
Identity = 116/138 (84.06%), Postives = 130/138 (94.20%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+DECKLKFLELK+KRT+RFII+KI+EK K VVVEK+G P  +Y+DFAASL
Sbjct: 1   MANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P +ECRYA++D+DFVTEENCQKS+IFFIAWSPD SRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQATDPTE+GLDVIR RA
Sbjct: 121 LQATDPTEVGLDVIRGRA 138

[Close]
BLAST of CmoCh03G004520 vs. ExPASy Swiss-Prot
Match: Q39250 (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 8.2e-62
Identity = 115/138 (83.33%), Postives = 128/138 (92.75%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHRFI++KIEEK KQVVVEK+G P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQATDPTEM LDV RSRA
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

[Close]
BLAST of CmoCh03G004520 vs. ExPASy Swiss-Prot
Match: Q9ZSK3 (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 236.1 bits (601), Expect = 2.4e-61
Identity = 113/137 (82.48%), Postives = 128/137 (93.43%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHRFI++KIEEK KQV+VEK+G P  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTEM LDV++SR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]
BLAST of CmoCh03G004520 vs. ExPASy TrEMBL
Match: A0A6J1GD54 (actin-depolymerizing factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453110 PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 5.3e-72
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAGI 141
           LQATDPTEMGLDVIRSRAGI
Sbjct: 121 LQATDPTEMGLDVIRSRAGI 140

[Close]
BLAST of CmoCh03G004520 vs. ExPASy TrEMBL
Match: A0A6J1IRV5 (actin-depolymerizing factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478768 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.2e-71
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELK+KRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKTKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAGI 141
           LQATDPTEMGLDVIRSRAGI
Sbjct: 121 LQATDPTEMGLDVIRSRAGI 140

[Close]
BLAST of CmoCh03G004520 vs. ExPASy TrEMBL
Match: A0A6J1I5N8 (actin-depolymerizing factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471251 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.5e-69
Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFI+FKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSK+RFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKERFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQATDPTEMGLDVIRSRA
Sbjct: 121 LQATDPTEMGLDVIRSRA 138

[Close]
BLAST of CmoCh03G004520 vs. ExPASy TrEMBL
Match: A0A6J1HFY8 (actin-depolymerizing factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111463208 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.5e-69
Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSK+RFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKERFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQATDPTEMGLD+IRSRA
Sbjct: 121 LQATDPTEMGLDIIRSRA 138

[Close]
BLAST of CmoCh03G004520 vs. ExPASy TrEMBL
Match: A0A0A0KX62 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G294380 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.6e-68
Identity = 133/138 (96.38%), Postives = 137/138 (99.28%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFI+FKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P +ECRYAVYDFDFVTEENCQKSRIFFIAWSPD+S+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PANECRYAVYDFDFVTEENCQKSRIFFIAWSPDDSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQATDPTEMGLDVIRSRA
Sbjct: 121 LQATDPTEMGLDVIRSRA 138

[Close]
BLAST of CmoCh03G004520 vs. NCBI nr
Match: XP_022949831.1 (actin-depolymerizing factor 1-like [Cucurbita moschata] >XP_023543253.1 actin-depolymerizing factor 1-like [Cucurbita pepo subsp. pepo] >KAG6603669.1 Actin-depolymerizing factor 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033848.1 Actin-depolymerizing factor 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 280.0 bits (715), Expect = 1.1e-71
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAGI 141
           LQATDPTEMGLDVIRSRAGI
Sbjct: 121 LQATDPTEMGLDVIRSRAGI 140

[Close]
BLAST of CmoCh03G004520 vs. NCBI nr
Match: XP_022978980.1 (actin-depolymerizing factor 1-like [Cucurbita maxima])

HSP 1 Score: 278.9 bits (712), Expect = 2.5e-71
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELK+KRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKTKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAGI 141
           LQATDPTEMGLDVIRSRAGI
Sbjct: 121 LQATDPTEMGLDVIRSRAGI 140

[Close]
BLAST of CmoCh03G004520 vs. NCBI nr
Match: XP_038881189.1 (actin-depolymerizing factor 1-like isoform X3 [Benincasa hispida] >XP_038881190.1 actin-depolymerizing factor 1-like isoform X3 [Benincasa hispida])

HSP 1 Score: 273.5 bits (698), Expect = 1.0e-69
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFI+FKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQATDPTEMGLDVIRSRA
Sbjct: 121 LQATDPTEMGLDVIRSRA 138

[Close]
BLAST of CmoCh03G004520 vs. NCBI nr
Match: XP_022972737.1 (actin-depolymerizing factor 1-like [Cucurbita maxima] >XP_023517168.1 actin-depolymerizing factor 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.9 bits (694), Expect = 3.0e-69
Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAVNDECKLKFLELKSKRTHRFI+FKIEEKLKQVVVEKLGGPSQSYEDFAASL
Sbjct: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSK+RFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKERFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQATDPTEMGLDVIRSRA
Sbjct: 121 LQATDPTEMGLDVIRSRA 138

[Close]
BLAST of CmoCh03G004520 vs. NCBI nr
Match: XP_038881187.1 (actin-depolymerizing factor 1-like isoform X2 [Benincasa hispida] >XP_038881188.1 actin-depolymerizing factor 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 271.9 bits (694), Expect = 3.0e-69
Identity = 135/137 (98.54%), Postives = 136/137 (99.27%), Query Frame = 0 

Query: 2   ANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASLP 61
           ANAASGMAVNDECKLKFLELKSKRTHRFI+FKIEEKLKQVVVEKLGGPSQSYEDFAASLP
Sbjct: 5   ANAASGMAVNDECKLKFLELKSKRTHRFIVFKIEEKLKQVVVEKLGGPSQSYEDFAASLP 64

Query: 62  TDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVEL 121
            DECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 65  ADECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVEL 124

Query: 122 QATDPTEMGLDVIRSRA 139
           QATDPTEMGLDVIRSRA
Sbjct: 125 QATDPTEMGLDVIRSRA 141

[Close]
BLAST of CmoCh03G004520 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 237.7 bits (605), Expect = 5.8e-63
Identity = 115/138 (83.33%), Postives = 128/138 (92.75%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHRFI++KIEEK KQVVVEK+G P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRA 139
           LQATDPTEM LDV RSRA
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

[Close]
BLAST of CmoCh03G004520 vs. TAIR 10
Match: AT3G46010.2 (actin depolymerizing factor 1 )

HSP 1 Score: 236.1 bits (601), Expect = 1.7e-62
Identity = 114/137 (83.21%), Postives = 127/137 (92.70%), Query Frame = 0 

Query: 2   ANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASLP 61
           ANAASGMAV+D+CKL+FLELK+KRTHRFI++KIEEK KQVVVEK+G P Q+YE+FAA LP
Sbjct: 13  ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 72

Query: 62  TDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVEL 121
            DECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 73  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 132

Query: 122 QATDPTEMGLDVIRSRA 139
           QATDPTEM LDV RSRA
Sbjct: 133 QATDPTEMDLDVFRSRA 149

[Close]
BLAST of CmoCh03G004520 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 236.1 bits (601), Expect = 1.7e-62
Identity = 113/137 (82.48%), Postives = 128/137 (93.43%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKL+FLELK+KRTHRFI++KIEEK KQV+VEK+G P  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYA+YDFDFVT ENCQKS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTEM LDV++SR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]
BLAST of CmoCh03G004520 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 230.3 bits (586), Expect = 9.3e-61
Identity = 105/140 (75.00%), Postives = 127/140 (90.71%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MAN+ASGM VNDECK+KFLELK+KRT+RFI+FKI+EK +QV +EKLG P ++Y+DF +S+
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P DECRYAVYDFDF TE+NCQKS+IFFIAWSPD SRVRSKM+YASSKDRFKRE++GIQVE
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRAGI 141
           LQATDP+EM LD+I+ R  +
Sbjct: 121 LQATDPSEMSLDIIKGRLNL 140

[Close]
BLAST of CmoCh03G004520 vs. TAIR 10
Match: AT3G46000.1 (actin depolymerizing factor 2 )

HSP 1 Score: 228.4 bits (581), Expect = 3.5e-60
Identity = 110/137 (80.29%), Postives = 125/137 (91.24%), Query Frame = 0 

Query: 1   MANAASGMAVNDECKLKFLELKSKRTHRFIIFKIEEKLKQVVVEKLGGPSQSYEDFAASL 60
           MANAASGMAV+D+CKLKF+ELK+KRT R I++KIE+  KQV+VEKLG P QSY+DFAASL
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASL 60

Query: 61  PTDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGIQVE 120
           P D+CRY +YDFDFVT ENCQKS+IFFIAWSPD ++VR KMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTEMGLDV +SR
Sbjct: 121 LQATDPTEMGLDVFKSR 135

The following BLAST results are available for this feature:
BLAST of CmoCh03G004520 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FVI26.7e-6486.23Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1[more]
Q9FVI16.7e-6486.33Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1[more]
Q0DLA33.7e-6284.06Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 P... [more]
Q392508.2e-6283.33Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1[more]
Q9ZSK32.4e-6182.48Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2[more]
BLAST of CmoCh03G004520 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GD545.3e-72100.00actin-depolymerizing factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111453110... [more]
A0A6J1IRV51.2e-7199.29actin-depolymerizing factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111478768 P... [more]
A0A6J1I5N81.5e-6997.83actin-depolymerizing factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471251 P... [more]
A0A6J1HFY81.5e-6997.83actin-depolymerizing factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111463208... [more]
A0A0A0KX621.6e-6896.38ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G294380 PE=3 ... [more]
BLAST of CmoCh03G004520 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022949831.11.1e-71100.00actin-depolymerizing factor 1-like [Cucurbita moschata] >XP_023543253.1 actin-de... [more]
XP_022978980.12.5e-7199.29actin-depolymerizing factor 1-like [Cucurbita maxima][more]
XP_038881189.11.0e-6998.55actin-depolymerizing factor 1-like isoform X3 [Benincasa hispida] >XP_038881190.... [more]
XP_022972737.13.0e-6997.83actin-depolymerizing factor 1-like [Cucurbita maxima] >XP_023517168.1 actin-depo... [more]
XP_038881187.13.0e-6998.54actin-depolymerizing factor 1-like isoform X2 [Benincasa hispida] >XP_038881188.... [more]
BLAST of CmoCh03G004520 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G46010.15.8e-6383.33actin depolymerizing factor 1 [more]
AT3G46010.21.7e-6283.21actin depolymerizing factor 1 [more]
AT5G59890.11.7e-6282.48actin depolymerizing factor 4 [more]
AT4G00680.19.3e-6175.00actin depolymerizing factor 8 [more]
AT3G46000.13.5e-6080.29actin depolymerizing factor 2 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 12..139
e-value: 8.0E-60
score: 214.7
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 14..136
e-value: 1.2E-37
score: 128.5
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 7..139
score: 38.717911
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10Severincoord: 1..139
e-value: 4.6E-53
score: 181.3
NoneNo IPR availablePANTHERPTHR11913:SF74ACTIN-DEPOLYMERIZING FACTOR 2-LIKEcoord: 1..138
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 2..137
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 1..138
IPR017904ADF/CofilinCDDcd11286ADF_cofilin_likecoord: 6..138
e-value: 2.2057E-67
score: 198.165

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G004520.1CmoCh03G004520.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005737 cytoplasm
molecular_function GO:0051015 actin filament binding
molecular_function GO:0003779 actin binding