CmoCh03G004010 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh03G004010
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionclass I heat shock protein-like
LocationCmo_Chr03: 4823897 .. 4829548 (+)
RNA-Seq ExpressionCmoCh03G004010
SyntenyCmoCh03G004010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTTGTGGAGTTGCATTCGGCTTATCGAAGTGTGTGCAATTAGCTGTAGTTTTGAAGGATTTTGGTTAGTTCTAAGAAGGGTTTCTTTCCCTTCCCTTGCACTCTAAATATTCCAAAATTCCAAAAGACACCCAATTTAGGCAACTTTTTGGATGGCCAATTTTTAAAGCTTATCATTATCTCTAGAACACTTTGAATTTGTTAAATTGTGTGATACATTGAATATAACAAAGATCGGTACCAGTTGTTAGCGCTAATACCAATTGTTAGAATTGCTCAACAACGCACACACTATGAATACGAGAAAATACAAAGAGGAGTATTGGCTAATGATTTTATGACTTCAGGCATGTACAACAAGATAAGAATACAGAAAATGAAGAAAAAAAAAACATTTTGAGAGCACTGTCTAATGGTTATATATGGTTTTAATTTATTAAATATAGTTTCCAAAGATTTAAACCGACCGTATATAATCTAATAAATATATTTCTCTCCAATTTTTACCAAATATCTACCATATATATCCCTATTACATCACTTCCCAAATATATCTTCCAGATCTTTACTAAATATCTTCTAAATATATCTCTAGCTAGACATTTGACTCCATCTCAATAATCTCCCACGAGGAGATTGATCCAGTCAACCCTCTCCACTTGGAGATTGATCCAGTCAACCCAACAATCTACCCATTGGAGATTGATCCAGATCCAGTCAAACAAAAATTTCATTATCAACGTTAATGTTTCAACATCAACACAAAATGTTTGTTAGATTCTTTGCACCCTCTATCTTCTCCAAACACATCACCATCTTCCACTAACCTCCGAGTGAAATGGTATCGCCTTCTGTGTTTTGTCTTTGAATGATAGATCGGGTTTCTCGCCAACTGTATGACACTCTAACTATCTACCTGAAGAATCTTCTCGCGTTGCTTCTTGCCTAATTCTTCTGGATAGCTTGTCATCCATATCATCTCATTTCCAGCATCAACCATTGCCACGTACACAGCTTCAGCCAATGCCACGTACTCAGCCTCAGTAGATGAAACAGCAACGCATTTATGAAGCCTAGACATCCCATCATCCGTAGCTTGCTCCCACTTGGTTGTATCCTCCAACTGTAGGACCTCATCAAGGGGCTTTCATTCCCCTTCATCAGTCACCAATCGATAGTGTAAAGAAGGTACTTACCTATCTGGTACTCTGATGGCTCTAGATGATCTTTTCAACACCTGCTCAAGTGTCACTTGCGCCTCTTCTGATTCTTCAGCAACAATCTTAGGAGTTTCTTGAGTATCAACTACAACATCACTAGGTGAATCTTTCAAGAACTCAACCTCAACTCCCACTTGCTTCACCTCTGGTTCCTCAACAATAGTCTCAGGAGTTTCTTGAGTATCTGCTACATCACTCTGTGAATTGTTCTGCAACTCAACCTCAACTCCCACTTGCTTAGTTATCTCGGTACTTTTCTTCAATTCTCTGGTAGATTTTGTAAAGCTAACTCGTTTCTGTTTGCTCATAACGCAGTTCTCACAAGGACTCATATCAACAAATTTCAGACCTTCCAAAACTCCTTCCGCAACCAACATCTTCATTCCTTTAACGCTCATATGTCCAAGTCTATTGTGTCATATACTTGAATTTGAAGCACTCTTAGCAACAGCAGCTCTGTTCATACACCCTGCAGTGGTGTATAAAATTCCAGATTTTGTGCCACGTGCTACCACCATAGCACCCTTCACAATCTTCCACGAACTCTTACCAAACTTTGTTGCATAACCTGTGCTATCCAACTGATCAATAGAGATCAAGTTCTTCTTGAGACTAGGAATATATCTGACATTCTTTAATGTCCATTGATTTCCTGTCGGAGTTTTTATGCGGACATCTCCTTTTCTTCGATCTTCAAATCTTTGTTGTTGGCAAGATACACCTTCTCGAAACTTCCAGACTTGAAATTTCGAAGCAACTCTTTATTTGGAGACGAATGAAAAGATGCACTTGAATTCAAAATTCAAGATTCAATCAGGCTGTCCACGCTGTTCGATCTTCAAATCTTTATTGTTCGCAAGATACACCTTCTCGATGATGGTGTTAATATAACACATGCGGAAGCAATTTGGATCTTAGGCACTTTTAGAACATCAATGATAGTAAATAACTAGCATGTTCATAAGTATTAAAACTTAATGAGTTTGAATACTAACCTTTTGTAGTTCAAATTTCTTTTTCTTTACGAACCGATTTCGAACCACCACTAGTGTTTTCTCCACTATCCTCTAGCCTTAGAACAAGATTGTGGAATCCGGTGAGTGACTAAACTTGGGAGGGATTTTGTATATATGAAGAGAGTATTTGTGACAGGTTTTTCTCAAGGTTTTTCCCAAGAAGCCCTCCCATGTACCATGATCACTCTATTTATAGAGTCATGTTTGCATGTTCATGCAAATTTGAGATCACCAAATTTTGACACTCAAAATTCCACTCAAACTGGTGGGGTTTATTTGGCAAGCATGCAAGTTTGGTTAAACCGGTGTCAAAATTCCACTGACATGGATTTTTTCCTTAAATGAAGTCAACTTTTTGACTTTCTTCATTTTAATTCAACAATTAATTTGAATAATTAATTTAAAATTAGAGTAATATTAAATGATTAATTAAACTATTTAATTAATATTTAATATTAACTCAAAAGTTCGCAATCAATTCTAACACATATTTGATTAAAATATTTAAATTTTATTTAAATATCTCAAATTGTCTCTTTTTGTTTAATTCATAAATAAAACAAAAATGCTGTTAAATATATTGTATATATGTAGCGCATATTCCCTAATTTGAATTCGAACACTTCGAACTCACTCGTCACACTGTTCTAATGTTTAGTTCGATATGAGCTAGTAGAGGGACCTAATGGACCTATAGATCATGGGCTCCAACGATCCAAGATTAACCGGTTAAACTCATTAACCTTGTTAATCATTAAAACTCGTTAACTACTAGGACACTTCACTATAGCCTAGTAGTTGCACTCCCCTCACTATAGATATATTTCTGTCCATTTGATATAACCATGATTAGTAAGTCGATCCTTCACAGGTTGTTCGTAACTAGAGCTTGGTCAATTAGCCGTTTTACCCCTGAAGTTACTTCTTGTTCCTTATGTCCCATTGATCCTCTTATGAACAATTGGTTTGTGGTCCAACCAGTGAACCGAATCCTTCTCAAGCCAATGAGTGGTTGGGGCCCCTTGTTCAAGATCTGGAGTCAGTACTTAAGGGACTACCTCTCTTCTATCCCTAAAAGTGGGTAAAAGCGAATTTCATCTTGCACACCATGTCCCCAGCTATTCACCCAGTCTTACCCCTGGAATGGGAGGCCTATTAAGTCGGCGAACTTGAGCCACTCTCACCCATGCAAATCTAAGGATAATTTCGAATAAACAGGAGTTCATGGTTAGCTCAAGATTAAGATTGAGTTACCTAGGTCATCGAATGAAAAGAAAATCAGTCTCAACAGTAAACGACATTATAAAGTGAGAGTGATTTTCTTCATGGTCCGATCTTATGCAATACTCATTGCATAGGACGCCCCCACTCACATGTACAATTTAGTGATCACATTGTTTATATCATATACAAAAATGGGCCGCATCCATAGTGTTCCCAGAATAAGGTACTCAGTCTTATCCTTATACTATAGATCATTTTGACTATATACTTGAACTTGATCCACTCTTATGCCTCTACATATAGTTCAAGTAATCATACTATAGCCAGAATGTTCTTAATTTATTGGATTTAGATTAATGATCATAAAGTTCACTTTATTCAATAACAATCTTTACTGAATAAACAACAATAATAACTTTATTGAAAATAGAATATATTTTTGTTTACAAACTATGAGTTTTAGGACATAAAACCCAACACTCGAAACTTCCAGACTTGAAATTTTGAAGCAACTCTTTATTTAGAGACGTATGAAAAGATGCACCACTTCGATCAAATACGTTTGGTTTGTTTGGAGATTTTCCTCGGTTCCTTGATTTTGATCGCCCATTGTTTGGGCCCTTTGATTTACTTCTTCCCCTTCGATCAAATACACCTTCGGCATGTCCACCAGCACGGGTTCCTTTCTGCTTCGGTGAAGGTTCAGTTCATCTGCGCTGATGGCATGCAGTTTGGTCACCTCTTGTTTGAGTTTGCGCGCCGCCAGTCCAGGTGGGTTCACCTCCTCTTGGTCTTCCATCCTCCGGTACCTGGCCACCAAATCATCATCGTGATCGGCATCCATCGTTGAATCCGTAGTCCGTGGTGTTGCAAACTCCACTGGTTCAGGGGGTGCAACTGCTGACGGCGGTGACGGTTCCCGATGCTACGCTCCTGTTCGGTTAATCTACGTTGATGGCATGCAATTCGACCACCTCTTGTTCGAGTTCGCACGTCGCCAGTCCAGGTGATTCACCTCCTCCCACTAGGTTTTCCATCCTCCGGTACCTGGCCACTAGATCATCATCGTGATCGGCATCCATTGTTGAATCTGCAGTCTATGGTGTTACAAACTCCACTGGTTCAGGGAGTGCAGCTGCTGGCAGCAATGACGGTTCCCAATGCTGCACTCCTGTTTGGTTTATCTGCGCTGATGGTATGCAGTTCGGCCACCTCTCGTTCGAGTTCGCACGGCGCCAGTCCAAGTGGTTCACCTCCTCCCACTTAGTCTTCCATCCTTTGGTACTTGGCCACCAGATCATCATCACGATCGGCATCCATCGTTGAATCTGCAGTCCGGGGTGTTGCAAACTCCACTGGTTCAGGGGGTGCAGCTGCTGGCGGTAGTGACGGTTCCCGATGCTGCGCTCCTCCTTCTCCCGACTCGATGACGAGGTACTCCACCTTCTGCCTCGGCCACTTCGTTCCACTGCCAAAAAGGCGCCGTTAGTTGCCGCTGCATGCCAAGCTTGCTGAGATGAATTCTTCGCCTCGGTCCGTGCGTGGCACTCGCATCTTCTTCCCACATTCGACCTCCGCCGCCTCACTTTTCCATCGCCGCAATAGGATGTCGGAAAGGGGGTGCGCCTCTCCGTCGCACAGCTTGTTTCACGCCTTTGATTGCCGGTAAACCATGCACCCGTGGAGGAGTGAGCGAGCCTGCTCGAGATGGACCCCACGATGTGTGTATTTTCACGCTTTGTATTTTCTTCTACTTGAACTTGAGAGAGAACTATGTGTTGTTAGGTCGACCTTGAGTTATTCAACTTGACTTTTGATAAAGTACTTCTCTACAATAATATATCACAGGTGGATTAAGCTAGATTTTGATACCATTGTTGTCTTTTTGACCATTGGTGAGAGGAAATGGTTGACTGAACGAGAGAAAAATCTAAAAAATGGCCACTCAAAAAATTGGTAATCGTTTCAAATGGTAAAATATTCGATTAACTGAGTAAAATCATATAAAAGCAATAACGAAACCTCGGGCTAGGTGCCCACATTTTCAAGGCCGATCTGCCGGGGCTGAAGAAGGAGGAAGTCAAAGTGGAGGTGGAGGACGGCGGCGTGCTTCAGATCAGCGGCGAGAGGGGCGTTGAAAAGGAGGAGAAGAACGATGCGTTGAAAGTGGCAAAGGGAAGTTCCTGA

mRNA sequence

ATGGCTTTTGTGGAGTTGCATTCGGCTTATCGAAGTGCCCACATTTTCAAGGCCGATCTGCCGGGGCTGAAGAAGGAGGAAGTCAAAGTGGAGGTGGAGGACGGCGGCGTGCTTCAGATCAGCGGCGAGAGGGGCGTTGAAAAGGAGGAGAAGAACGATGCGTTGAAAGTGGCAAAGGGAAGTTCCTGA

Coding sequence (CDS)

ATGGCTTTTGTGGAGTTGCATTCGGCTTATCGAAGTGCCCACATTTTCAAGGCCGATCTGCCGGGGCTGAAGAAGGAGGAAGTCAAAGTGGAGGTGGAGGACGGCGGCGTGCTTCAGATCAGCGGCGAGAGGGGCGTTGAAAAGGAGGAGAAGAACGATGCGTTGAAAGTGGCAAAGGGAAGTTCCTGA

Protein sequence

MAFVELHSAYRSAHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNDALKVAKGSS
Homology
[Close]
BLAST of CmoCh03G004010 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 9.1e-13
Identity = 39/55 (70.91%), Postives = 44/55 (80.00%), Query Frame = 0 

Query: 2   AFVELHSAYR---SAHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKND 54
           AFV  H  ++    AH+FKADLPGLKKEEVKVE+E+G VLQISGER  EKEEKND
Sbjct: 46  AFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKND 100

[Close]
BLAST of CmoCh03G004010 vs. ExPASy Swiss-Prot
Match: P19243 (18.1 kDa class I heat shock protein OS=Pisum sativum OX=3888 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 3.5e-12
Identity = 36/41 (87.80%), Postives = 38/41 (92.68%), Query Frame = 0 

Query: 13  AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKND 54
           AH+FKADLPGLKKEEVKVEVED  VLQISGER VEKE+KND
Sbjct: 61  AHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKND 101

[Close]
BLAST of CmoCh03G004010 vs. ExPASy Swiss-Prot
Match: P27879 (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa OX=3879 GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 4.5e-12
Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 0 

Query: 13 AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKND 54
          AH+FKADLPGLKKEEVKVE+ED  VLQISGER VEKE+KND
Sbjct: 46 AHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKND 86

[Close]
BLAST of CmoCh03G004010 vs. ExPASy Swiss-Prot
Match: P27397 (18.0 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 4.5e-12
Identity = 38/55 (69.09%), Postives = 43/55 (78.18%), Query Frame = 0 

Query: 2   AFVELHSAYR---SAHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKND 54
           AF   H  ++    AH+FKADLPGLKKEEVKVEVE+G VLQISGER  EKEEKN+
Sbjct: 48  AFANTHIDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNN 102

[Close]
BLAST of CmoCh03G004010 vs. ExPASy Swiss-Prot
Match: P02519 (17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 5.9e-12
Identity = 35/50 (70.00%), Postives = 42/50 (84.00%), Query Frame = 0 

Query: 13  AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNDALKVAKGSS 63
           AH+FKAD+PGLKKEEVK+E++DG VLQISGER VEKE+KND     + SS
Sbjct: 56  AHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSS 105

[Close]
BLAST of CmoCh03G004010 vs. ExPASy TrEMBL
Match: A0A6J1ITR2 (18.1 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111478336 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.7e-12
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 13 AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKND 54
          AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKN+
Sbjct: 46 AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNE 86

[Close]
BLAST of CmoCh03G004010 vs. ExPASy TrEMBL
Match: A0A6J1GDY5 (18.1 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111453310 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.7e-12
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 13 AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKND 54
          AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKN+
Sbjct: 46 AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNE 86

[Close]
BLAST of CmoCh03G004010 vs. ExPASy TrEMBL
Match: A0A6J1DES4 (class I heat shock protein-like OS=Momordica charantia OX=3673 GN=LOC111019408 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.3e-11
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 13 AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKND 54
          AHIFKADLPGLKKEEVKVEVEDGGVLQISGER VEKEEKN+
Sbjct: 47 AHIFKADLPGLKKEEVKVEVEDGGVLQISGERAVEKEEKNE 87

[Close]
BLAST of CmoCh03G004010 vs. ExPASy TrEMBL
Match: A0A5A7TT84 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001480 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.0e-11
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 13 AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKND 54
          AHIFKADLPGLKKEEVKVEVEDGG+LQISGER VEKEEKN+
Sbjct: 46 AHIFKADLPGLKKEEVKVEVEDGGILQISGERAVEKEEKNE 86

[Close]
BLAST of CmoCh03G004010 vs. ExPASy TrEMBL
Match: A0A0A0L154 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G303700 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.0e-11
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 13 AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKND 54
          AHIFKADLPGLKKEEVKVEVEDGG+LQISGER VEKEEKN+
Sbjct: 46 AHIFKADLPGLKKEEVKVEVEDGGILQISGERAVEKEEKNE 86

[Close]
BLAST of CmoCh03G004010 vs. NCBI nr
Match: XP_022950131.1 (18.1 kDa class I heat shock protein-like [Cucurbita moschata] >XP_023543160.1 18.1 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 79.7 bits (195), Expect = 9.7e-12
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 13 AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKND 54
          AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKN+
Sbjct: 46 AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNE 86

[Close]
BLAST of CmoCh03G004010 vs. NCBI nr
Match: KAG6603616.1 (17.6 kDa class I heat shock protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 79.7 bits (195), Expect = 9.7e-12
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 13  AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKND 54
           AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKN+
Sbjct: 173 AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNE 213

[Close]
BLAST of CmoCh03G004010 vs. NCBI nr
Match: XP_038881342.1 (class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 79.7 bits (195), Expect = 9.7e-12
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 13 AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKND 54
          AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKN+
Sbjct: 46 AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNE 86

[Close]
BLAST of CmoCh03G004010 vs. NCBI nr
Match: XP_022978309.1 (18.1 kDa class I heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 79.7 bits (195), Expect = 9.7e-12
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 13 AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKND 54
          AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKN+
Sbjct: 46 AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNE 86

[Close]
BLAST of CmoCh03G004010 vs. NCBI nr
Match: XP_022151476.1 (class I heat shock protein-like [Momordica charantia])

HSP 1 Score: 77.4 bits (189), Expect = 4.8e-11
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 13 AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKND 54
          AHIFKADLPGLKKEEVKVEVEDGGVLQISGER VEKEEKN+
Sbjct: 47 AHIFKADLPGLKKEEVKVEVEDGGVLQISGERAVEKEEKNE 87

[Close]
BLAST of CmoCh03G004010 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 7.1e-13
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0 

Query: 13  AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKND 54
           AH+FKADLPGL+KEEVKVEVEDG +LQISGER  E EEKND
Sbjct: 60  AHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKND 100

[Close]
BLAST of CmoCh03G004010 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 68.9 bits (167), Expect = 1.6e-12
Identity = 35/41 (85.37%), Postives = 36/41 (87.80%), Query Frame = 0 

Query: 13  AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKND 54
           AH+FKADLPGLKKEEVKVEVED  VLQISGER  E EEKND
Sbjct: 62  AHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKND 102

[Close]
BLAST of CmoCh03G004010 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 68.6 bits (166), Expect = 2.1e-12
Identity = 35/50 (70.00%), Postives = 40/50 (80.00%), Query Frame = 0 

Query: 13  AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNDALKVAKGSS 63
           AH+FKAD+PGLKKEEVKVEVEDG +LQISGER  E EEK+D     + SS
Sbjct: 59  AHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSS 108

[Close]
BLAST of CmoCh03G004010 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 2.7e-12
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0 

Query: 13  AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNDALKVAKGSS 63
           AH+FKADLPGLKKEEVKVE+E+  VL+ISGER VEKE+KND     + SS
Sbjct: 56  AHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSS 105

[Close]
BLAST of CmoCh03G004010 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 3.5e-12
Identity = 35/50 (70.00%), Postives = 40/50 (80.00%), Query Frame = 0 

Query: 13  AHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNDALKVAKGSS 63
           AH+FKADLPG+KKEEVKVE+ED  VL+ISGER VEKEEK D     + SS
Sbjct: 58  AHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSS 107

The following BLAST results are available for this feature:
BLAST of CmoCh03G004010 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P273969.1e-1370.9117.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1[more]
P192433.5e-1287.8018.1 kDa class I heat shock protein OS=Pisum sativum OX=3888 GN=HSP18.1 PE=1 SV=... [more]
P278794.5e-1285.3718.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa OX=3879 GN=HSP... [more]
P273974.5e-1269.0918.0 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1[more]
P025195.9e-1270.0017.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=... [more]
BLAST of CmoCh03G004010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ITR24.7e-1297.5618.1 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC11147... [more]
A0A6J1GDY54.7e-1297.5618.1 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1DES42.3e-1195.12class I heat shock protein-like OS=Momordica charantia OX=3673 GN=LOC111019408 P... [more]
A0A5A7TT843.0e-1192.6818.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A0A0L1543.0e-1192.68SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G303700 PE=3 S... [more]
BLAST of CmoCh03G004010 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022950131.19.7e-1297.5618.1 kDa class I heat shock protein-like [Cucurbita moschata] >XP_023543160.1 18... [more]
KAG6603616.19.7e-1297.5617.6 kDa class I heat shock protein 3, partial [Cucurbita argyrosperma subsp. so... [more]
XP_038881342.19.7e-1297.56class I heat shock protein-like [Benincasa hispida][more]
XP_022978309.19.7e-1297.5618.1 kDa class I heat shock protein-like [Cucurbita maxima][more]
XP_022151476.14.8e-1195.12class I heat shock protein-like [Momordica charantia][more]
BLAST of CmoCh03G004010 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G53540.17.1e-1382.93HSP20-like chaperones superfamily protein [more]
AT5G59720.11.6e-1285.37heat shock protein 18.2 [more]
AT3G46230.12.1e-1270.00heat shock protein 17.4 [more]
AT2G29500.12.7e-1270.00HSP20-like chaperones superfamily protein [more]
AT1G07400.13.5e-1270.00HSP20-like chaperones superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 5..62
e-value: 9.5E-13
score: 50.1
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 12..53
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 12..54
e-value: 2.2E-7
score: 31.0
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 1..62
score: 11.455738
NoneNo IPR availablePANTHERPTHR11527:SF30517.6 KDA CLASS I HEAT SHOCK PROTEIN 1-RELATEDcoord: 12..56
IPR031107Small heat shock protein HSP20PANTHERPTHR11527HEAT-SHOCK PROTEIN 20 FAMILY MEMBERcoord: 12..56

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G004010.1CmoCh03G004010.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051259 protein complex oligomerization
biological_process GO:0006457 protein folding
biological_process GO:0009408 response to heat
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0009651 response to salt stress
molecular_function GO:0043621 protein self-association
molecular_function GO:0051082 unfolded protein binding