CmoCh03G003730 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G003730
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Protein yippee-like
Location	Cmo_Chr03: 4664532 .. 4668732 (-)
RNA-Seq Expression	CmoCh03G003730
Synteny	CmoCh03G003730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCATAGAAACTGGTATTGATCGAATTATTTTTTTCTCGATTACTCGTTGAATCCATTTGTGACCGCCAGCGACGATCATCGGATTCTGATTCCACTTCCTCTTTTTCCTCTGTTTCAGCCTTCCCTGAATTTGCTTTGTAAGGTTGATCATGCCGATCTTTGTCTTGTTATTGTTGTTCTTCTTCAGTAGATCGATTTCTAGTAATTTTTCTTTGTTTTTCCGATTCTTGTATACTTGTTTCTCTTCGAACAGAAGCTGATTGGTAGAGATATTGCTGCAAGGAGAGGAGATGGGAAGGCTACTTTTGACTACTCTGGAAGGAAATTTCTATAGTTGCAAACACTGTAAAACTCATCTCGCCCTTCAGGAAGACATAATTTCAAGGGTATCTAATTCAATTACTCTATTCCACATGCACATTTGAGTAGCACATTTGATCTTTTTGCTGATATTTTTTTGTATTGTGTTGATATTGTTATTGAGTTGTGTTTGATTGAGACTAACCAATGAGTGTTGATGATGAAAGTCCCACATCTCCTAATTTAGGAAATGATCATGGATTTATAATCAAAGAATACTCTCTCCATTGGAGTGAGGCCTTTTGGGGAAGGCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGAACAATATCATACCATTGTGGAGAGTCATGTTCATCTAACATGGCATCAGAGCCATGCCCTAAACTTAGTCGTGCCAATAGATTGGTAAATCCTTAAAAATGTCGAACAAAGGACTCCAAAGGAAAAAGGAGTCGAGCTTCGATTAAGGGGAGACGTACTTTGTTCGAGGGGAGGTGTTGGATGATGAAAGTCTCACATCTCCTAATTTGGGAAATGATCATGGGTTTATAATCAAAGTATACTCTCTAGTGAGGCCTTTTGGGGAAGCCCAAAGCACAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCATGTTCATCTTACAGTGAGTAACGGTTTGTTTCGAGTGTTTATTTTGGTAAGAGGAAATCGGTATCTATAGGAAAAAGAGTCTTTAATGCTCTAAAAGATTGATTCAATGCTTTGGACCACGTATCCGTTTTGAGAATTTTGATTCCTCGCTTTTGAATGCTCCGTATACCTTTTTAGCTTACATTTATAAACTAGGAACTATGAGAAAATTGTTCTTCGTTTAATCCTTAATCCTGTCTTAGTCTTTTGCTTGTAGTGCTTAATTTGCTGCCTGGATTGTTCTGTTTCTTTGTTCAATTAGTTCTGCATTCATCGAGTGATTTAGAACATCACAGATTTGCCTTGTACATTTAACGATAGGATTTGTTGCGCATATGGTGATCGATTTTATCATACTTATCAGAAGTATTAGATGCATGAATAGTGCTAATAGTGTTGAGGATTGTTTGGAGGGGGTCCCACATGAGCTAATCAAGGGGTTGATCATGAGTTTATAAGTAAGGAATACATCAGTTTATAAGTAAGGAATACATCTCTATTGGTATGAGGCTTTCGGAGAAACTAAAAGCAAAGCCATGAAAGTTTATGTTCAGAGTGGACAATATCATACTATTGTGGAGAGTTGAGATTTCTAACAAATAGGGATTCTAATTGCATTCTCATTCCAGTATTCGTACGACTGCCCTTTACAATACTCCCTTTTCCTGAAGATGACTCCATCCACCCATATAATTTCTTGTAGATTCCAAGTAATTTTCGTTATGTGAGTGATAAGAATTTTAGTCTTTTTTCTATTGAATATGTTTGGTCGTTTGTGGCTTTTTCTAATTCACATTCATCAGAATCTTTATGTGGCTGCTGATGTGCTTTTAGAACTTGTTTTTATTGTATAAAATGGTTTGCTGATTTCAGCATTGGTATCTTTATGTCGAGCACTAGATTGCTCCTTATTTTGAGATGCTAAAGGACCTACCTATATCAGTGAATCCCACACTGCATTCATGATAGATGCTATGCTTTTTCAATCTCATAACTACTTCATAATATAACAACAAAATTCGATCCCGAGAACTTTTACTTTTATATTTTGTAGCGGCCCAAGCAAAGTACTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCGAGGTTTTTAAAACGTGTTTACTATGGAGAGGTTTTCACACACTTATAAATAATGATCTGTTCCCCTCTCCAACCGATTTGGGATCTCACAATCCACCTCCCTTGAGACCAGTGTACTCGCTGGCACTCGTTCTCCTCACTAATCGACGTGGGATCTCACATATTTGCATCCCTAATCTTTTTTTTACACTTATGCATATTATAGTATCAGAAAGATACATGGATATACTAACAGAATTCTGCTTTGCTTTTGTTACAGACTTTTCATTGCAGGCATGGGAAGGCGTACTTGTTTAATAACATGTGAGCTTACTCTTTGGTGTTCAATTTTTTTCTCTATGAAAACTAGGATTTTCATTTTAAAAGAAGTATAACATTTGGTATCTTGATTCACTGGAATCCTGGACGTTTATATAATAGTCTTATTTCCAAGTGCAGAACAAAATGTTTAATGTTTATGGTAGATCAGGTGCTTAAGCTGGAACGAGAATATACCGCTGCTTTTGTTCATCGAATTATTTGCCTACTTCTTCGGATGCGTACTTCGTTTTCTATGATTCATGCTTCTGTTGTTCCGTTGTCCAGTTCTCATTTAAGCCTTTCCTGTTGGAATGGGATTCTGGTCTTTCTTAGTAGTTTATTGTAAACTCCCGACATGCTATGAGCTAATTAACAGTATTAATTCATTGTCGATCGTAAAAGCACGATCTGTAGAACAAAAAAATGATGCTGGTATCTCTGTCTGTGCTTCACCCATTATATTTTGTTTCTGGATTCTTGTGGATGATACTCACATAGGAATTAGATTGGATAGTTCATAGGTGCCCTTAAATTGTTGCATACAGGATATTGTCATACTCATTAAACCTTCCACCAACATTTTGATTTCTATAATGCATCGCAGTGTCAATGTCACAGTTGGAGAACTAGAAAAGCGGATGTTGATCACAGGATTGCACACTGTTGTTGACATATTTTGTGTTGGTTGTGGCTCAATTCTTGGTTGGAAATATGTAAGATCTTCTGTTTCTTTCTTGCTTTCTTTTTTTACCTTTTGGTTTTCAAACCTTTTACTGATACCTCTATCGATTCCAGGAGATTGCACATGACAAATCCCAAAAGTACAAGGAAGGGAAATATATCCTTGAAATGTGAGGCCACTATACTTGGTAGCGTTTTTTAGTTCGAGTTCGGGAGTTCAAACCTCTAATCTCTTTGAGGGATATATGCTTTAAATCAATTGAACTATATCAGTGAGATCCCACATTGATTGGTGATGGGAACAAAACATTCGTTATAAGGATGTGGAAACCTCTTCCTAGTTTCAAAACTTTGAGGAACTTTGAGGGGAAGTCTGAAAGGGGGAGCTCAAACAAGACAATATCTGCTAGCGGTGAGTTTGGGCTATTACAAATGGTATCAGAGCCAGCAAGGACATTGGGTCCCCAAGGGGGATGGATTGTAAAATTCCACCTTGGTTGGAGAGGGGGAACGAAACATTCCTTGTAAGGATGTGGAAACCTCTTTCTAATGGACACATTTTAAAACCTTGAGCGGAAGCTCAAAAGGGAAAGGCCAAAGAGGACAATATATGCTAACCGTGAGCTTGAGCTGATACACTTTGTAGTTTTTATATTGTAAATCTTTGAATCAATGTTGAAACGTTAATGCATCGATTGCGCATCATATATCAAATTTAGAAAACATTATGATCCATCAATCTTTCTGTAAATTATGTGAAGATTTCACCTTTGTATCGCCATGAACACAGTTCTTGACTTCTTTTTGGTCTTTGGGAAAAACTTTGCAGGTTGAAGGTGTTGGGTCCTGATGGAAACAGCTACTTAGCAAGCCATGATCCGCAGCTTGCAGGAAGCGATGGCGACGATGCTTGATCTGCTGTCGAGTTCGGAAGTAGATAAGACCTTCTTTCTCCTTCTCCCATCCCCTTTTTCTTTGTTTCCATCTTATTATTGCCATTTAGCTCTTTCTTAAGCTTTTTGGTACACTGCCACTGCAGTTTTGGCTAGAAGCACAAGAACAACCTTCCTTTTCCAATTCAT

mRNA sequence

TTCATAGAAACTGGTATTGATCGAATTATTTTTTTCTCGATTACTCGTTGAATCCATTTGTGACCGCCAGCGACGATCATCGGATTCTGATTCCACTTCCTCTTTTTCCTCTGTTTCAGCCTTCCCTGAATTTGCTTTGTAAGAAGCTGATTGGTAGAGATATTGCTGCAAGGAGAGGAGATGGGAAGGCTACTTTTGACTACTCTGGAAGGAAATTTCTATAGTTGCAAACACTGTAAAACTCATCTCGCCCTTCAGGAAGACATAATTTCAAGGACTTTTCATTGCAGGCATGGGAAGGCGTACTTGTTTAATAACATTGTCAATGTCACAGTTGGAGAACTAGAAAAGCGGATGTTGATCACAGGATTGCACACTGTTGTTGACATATTTTGTGTTGGTTGTGGCTCAATTCTTGGTTGGAAATATGAGATTGCACATGACAAATCCCAAAAGTTGAAGGTGTTGGGTCCTGATGGAAACAGCTACTTAGCAAGCCATGATCCGCAGCTTGCAGGAAGCGATGGCGACGATGCTTGATCTGCTGTCGAGTTCGGAAGTAGATAAGACCTTCTTTCTCCTTCTCCCATCCCCTTTTTCTTTGTTTCCATCTTATTATTGCCATTTAGCTCTTTCTTAAGCTTTTTGGTACACTGCCACTGCAGTTTTGGCTAGAAGCACAAGAACAACCTTCCTTTTCCAATTCAT

Coding sequence (CDS)

ATGGGAAGGCTACTTTTGACTACTCTGGAAGGAAATTTCTATAGTTGCAAACACTGTAAAACTCATCTCGCCCTTCAGGAAGACATAATTTCAAGGACTTTTCATTGCAGGCATGGGAAGGCGTACTTGTTTAATAACATTGTCAATGTCACAGTTGGAGAACTAGAAAAGCGGATGTTGATCACAGGATTGCACACTGTTGTTGACATATTTTGTGTTGGTTGTGGCTCAATTCTTGGTTGGAAATATGAGATTGCACATGACAAATCCCAAAAGTTGAAGGTGTTGGGTCCTGATGGAAACAGCTACTTAGCAAGCCATGATCCGCAGCTTGCAGGAAGCGATGGCGACGATGCTTGA

Protein sequence

MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRMLITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKLKVLGPDGNSYLASHDPQLAGSDGDDA

Homology

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BLAST of CmoCh03G003730 vs. ExPASy Swiss-Prot
Match: P59234 (Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 7.8e-45
Identity = 82/128 (64.06%), Postives = 99/128 (77.34%), Query Frame = 0


Query: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
           MGRL + TLEG  YSCKHC THLAL E+I+S++FHC+HGKAYLF+ +VNVT GE+E RM+
Sbjct: 1   MGRLFVLTLEGKIYSCKHCGTHLALSENIVSKSFHCKHGKAYLFSKVVNVTSGEIENRMM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK----------LKVLGPDGNSYLASHDPQ 119
           +TG+HTV DIFCV CGSI+GWKYE AH+KSQK           K+ GPDG+ Y ASHD  
Sbjct: 61  MTGMHTVADIFCVCCGSIVGWKYETAHEKSQKYKEGKSVLERFKITGPDGSHYWASHDTH 120

[Close]

BLAST of CmoCh03G003730 vs. ExPASy Swiss-Prot
Match: Q9SR97 (Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 SV=2)

HSP 1 Score: 159.5 bits (402), Expect = 2.4e-38
Identity = 74/128 (57.81%), Postives = 94/128 (73.44%), Query Frame = 0


Query: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
           MGRL +  LEG  YSCK+C+TH A+  DIIS++FHC+HG+AYLF+N+VNVTVGE E R++
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK----------LKVLGPDGNSYLASHDPQ 119
           ITG HTV DIFCV CGS++GWKYEIA+DKSQK           KVLGP G  Y  + +  
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVLGPYGGGYDMNQNEP 120

[Close]

BLAST of CmoCh03G003730 vs. ExPASy Swiss-Prot
Match: Q9LY56 (Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 7.8e-37
Identity = 75/125 (60.00%), Postives = 91/125 (72.80%), Query Frame = 0


Query: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
           MGR+ +  LEGN Y CK CKTHL+  +DI+S++F C++G+AYLFNN+VNV+VGE E RM+
Sbjct: 1   MGRVFMVDLEGNIYICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNVSVGEKEDRMM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKLKVLGPDGNSYL------ASHDPQLAGS 120
           ITGLH VVDIFCVGCGS +GWKYE AH+KSQK K    +G S L        HD     S
Sbjct: 61  ITGLHNVVDIFCVGCGSNVGWKYEFAHEKSQKYK----EGKSVLELYKISGPHDSNDLVS 120

[Close]

BLAST of CmoCh03G003730 vs. ExPASy Swiss-Prot
Match: Q9C777 (Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-36
Identity = 72/129 (55.81%), Postives = 92/129 (71.32%), Query Frame = 0


Query: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
           MGRL L  LEG  YSCKHCKT+LAL +D++S++F  RHGKAYLF+ +VNV  G+ E RM+
Sbjct: 1   MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK----------LKVLGPDGNSYLASHDPQ 120
           +TG+HTVVDI+CV CGS +GWKYE A +K+QK           KV GPDGN+Y  + + +
Sbjct: 61  MTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKVWGPDGNNYWVAQEVE 120

[Close]

BLAST of CmoCh03G003730 vs. ExPASy Swiss-Prot
Match: Q9FN32 (Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 4.9e-31
Identity = 55/94 (58.51%), Postives = 74/94 (78.72%), Query Frame = 0


Query: 1  MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
          MGR+    LEG  Y C+ C+THLAL +D++SR+FHCR GKAYLFN  VN+++G LE+R++
Sbjct: 1  MGRIFTVELEGRSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLM 60

Query: 61 ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKLK 95
          ++G+HTV DIFC  CG  +GWKYE AH+K+QK K
Sbjct: 61 LSGMHTVADIFCCCCGQNVGWKYESAHEKAQKYK 94

[Close]

BLAST of CmoCh03G003730 vs. ExPASy TrEMBL
Match: A0A6J1GG37 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111453845 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.7e-61
Identity = 119/129 (92.25%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
           MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML
Sbjct: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK----------LKVLGPDGNSYLASHDPQ 120
           ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK          LKVLGPDGNSYLASHDPQ
Sbjct: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKYKEGKYILEMLKVLGPDGNSYLASHDPQ 120

[Close]

BLAST of CmoCh03G003730 vs. ExPASy TrEMBL
Match: A0A6J1IPR3 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111478339 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.4e-59
Identity = 118/130 (90.77%), Postives = 119/130 (91.54%), Query Frame = 0


Query: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
           MGRLLLTTLEGNFYSCKHCKTHLALQ+DIISRTFHCRHGKAYLFNNIVNVTVGELEKRML
Sbjct: 1   MGRLLLTTLEGNFYSCKHCKTHLALQKDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK----------LKVLGPDGNSYLASHDPQ 120
           ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK          LKVLGPDGNSYLASHDPQ
Sbjct: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKYKEGKYILEMLKVLGPDGNSYLASHDPQ 120

[Close]

BLAST of CmoCh03G003730 vs. ExPASy TrEMBL
Match: A0A1S4DWV3 (Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103491186 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.0e-51
Identity = 99/129 (76.74%), Postives = 110/129 (85.27%), Query Frame = 0


Query: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
           MGRL L  LEGNFYSCKHCKTHLAL +DIISRTF+CRHG+AYLFN++VNV+VGE E+RM+
Sbjct: 1   MGRLFLLXLEGNFYSCKHCKTHLALSKDIISRTFYCRHGRAYLFNDVVNVSVGEQEERMM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK----------LKVLGPDGNSYLASHDPQ 120
           ITGLHTVVDIFCVGCGSI+GWKYE+A+DKSQK           KVLGPDG  YLASHDPQ
Sbjct: 61  ITGLHTVVDIFCVGCGSIIGWKYEVAYDKSQKYKEGKYILEMFKVLGPDGTGYLASHDPQ 120

[Close]

BLAST of CmoCh03G003730 vs. ExPASy TrEMBL
Match: A0A0A0L2L2 (Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_4G308560 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.4e-51
Identity = 98/127 (77.17%), Postives = 108/127 (85.04%), Query Frame = 0


Query: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
           MGRL L TL+GNFYSCKHCKTHLAL +DIISRTF+CRHG+AYLFNN+VNVTVGE E+RM+
Sbjct: 1   MGRLFLITLDGNFYSCKHCKTHLALSKDIISRTFYCRHGRAYLFNNVVNVTVGEQEERMM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK----------LKVLGPDGNSYLASHDPQ 118
           ITGLHTVVDIFCVGCGSI+GWKYE+A+DKSQK           KVL PDG  YLASHDPQ
Sbjct: 61  ITGLHTVVDIFCVGCGSIIGWKYEVAYDKSQKYKEGKYILEMFKVLAPDGTGYLASHDPQ 120

[Close]

BLAST of CmoCh03G003730 vs. ExPASy TrEMBL
Match: A0A6J1DDY1 (Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111019496 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.4e-49
Identity = 96/129 (74.42%), Postives = 108/129 (83.72%), Query Frame = 0


Query: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
           MGRL L TLEGN YSCKHCK HLAL +DIIS+TFHCRHG+AYLF+N+VNVT+GE E+RM+
Sbjct: 1   MGRLFLITLEGNVYSCKHCKIHLALSKDIISKTFHCRHGRAYLFDNVVNVTIGEQEERMM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK----------LKVLGPDGNSYLASHDPQ 120
           ITGLHTVVDIFCVGCGSILGWKY+ A+DKSQK           KVL PDG+ Y+ASHD Q
Sbjct: 61  ITGLHTVVDIFCVGCGSILGWKYDFAYDKSQKYKEGKFILEMFKVLSPDGSGYIASHDLQ 120

[Close]

BLAST of CmoCh03G003730 vs. NCBI nr
Match: KAG7033778.1 (Chlorophyll a-b binding protein CP29.2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 250.0 bits (637), Expect = 1.0e-62
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
           MGRLLLTTLEGNFYSCKHCKTHLALQ+DIISRTFHCRHGKAYLFNNIVNVTVGELEKRML
Sbjct: 202 MGRLLLTTLEGNFYSCKHCKTHLALQKDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 261

Query: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKLKVLGPDGNSYLASHDPQLAGSDGDDA 120
           ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKLKVLGPDGNSYLASHDPQLAGSDGDDA
Sbjct: 262 ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKLKVLGPDGNSYLASHDPQLAGSDGDDA 320

[Close]

BLAST of CmoCh03G003730 vs. NCBI nr
Match: XP_022950878.1 (protein yippee-like [Cucurbita moschata] >XP_022950879.1 protein yippee-like [Cucurbita moschata])

HSP 1 Score: 243.4 bits (620), Expect = 9.7e-61
Identity = 119/129 (92.25%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
           MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML
Sbjct: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK----------LKVLGPDGNSYLASHDPQ 120
           ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK          LKVLGPDGNSYLASHDPQ
Sbjct: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKYKEGKYILEMLKVLGPDGNSYLASHDPQ 120

[Close]

BLAST of CmoCh03G003730 vs. NCBI nr
Match: XP_023543326.1 (protein yippee-like [Cucurbita pepo subsp. pepo] >XP_023543327.1 protein yippee-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.9 bits (616), Expect = 2.8e-60
Identity = 118/129 (91.47%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
           MGRLLLTTLEGNFYSCKHCKTHLALQ+DIISRTFHCRHGKAYLFNNIVNVTVGELEKRML
Sbjct: 1   MGRLLLTTLEGNFYSCKHCKTHLALQKDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK----------LKVLGPDGNSYLASHDPQ 120
           ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK          LKVLGPDGNSYLASHDPQ
Sbjct: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKYKEGKYILEMLKVLGPDGNSYLASHDPQ 120

[Close]

BLAST of CmoCh03G003730 vs. NCBI nr
Match: KAG6603593.1 (hypothetical protein SDJN03_04202, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 239.6 bits (610), Expect = 1.4e-59
Identity = 117/129 (90.70%), Postives = 118/129 (91.47%), Query Frame = 0


Query: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
           MGRLLLTTLEGNFYSC HCKTHLALQ+DIISRTFHCRHGKAYLFNNIVNVTVGELEKRML
Sbjct: 1   MGRLLLTTLEGNFYSCTHCKTHLALQKDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK----------LKVLGPDGNSYLASHDPQ 120
           ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK          LKVLGPDGNSYLASHDPQ
Sbjct: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKYKEGKYILEMLKVLGPDGNSYLASHDPQ 120

[Close]

BLAST of CmoCh03G003730 vs. NCBI nr
Match: XP_022978314.1 (protein yippee-like [Cucurbita maxima] >XP_022978315.1 protein yippee-like [Cucurbita maxima])

HSP 1 Score: 237.3 bits (604), Expect = 7.0e-59
Identity = 118/130 (90.77%), Postives = 119/130 (91.54%), Query Frame = 0


Query: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
           MGRLLLTTLEGNFYSCKHCKTHLALQ+DIISRTFHCRHGKAYLFNNIVNVTVGELEKRML
Sbjct: 1   MGRLLLTTLEGNFYSCKHCKTHLALQKDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK----------LKVLGPDGNSYLASHDPQ 120
           ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK          LKVLGPDGNSYLASHDPQ
Sbjct: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKYKEGKYILEMLKVLGPDGNSYLASHDPQ 120

[Close]

BLAST of CmoCh03G003730 vs. TAIR 10
Match: AT2G40110.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 172.6 bits (436), Expect = 2.0e-43
Identity = 78/130 (60.00%), Postives = 98/130 (75.38%), Query Frame = 0


Query: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
           MGRL +  LEG  YSCKHCKTHLA  EDIIS++FHC+HGKAYLFN + NV++GE E+R++
Sbjct: 1   MGRLFVVNLEGKIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK----------LKVLGPDGNSY-LASHDP 120
           +TG HTV DIFCV CGSI+GWKYE AH+K+QK           K+ GPDG++Y ++SH  
Sbjct: 61  MTGKHTVADIFCVSCGSIVGWKYETAHEKNQKYKEGKSVLERFKISGPDGSNYWVSSHGR 120

[Close]

BLAST of CmoCh03G003730 vs. TAIR 10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 159.5 bits (402), Expect = 1.7e-39
Identity = 74/128 (57.81%), Postives = 94/128 (73.44%), Query Frame = 0


Query: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
           MGRL +  LEG  YSCK+C+TH A+  DIIS++FHC+HG+AYLF+N+VNVTVGE E R++
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK----------LKVLGPDGNSYLASHDPQ 119
           ITG HTV DIFCV CGS++GWKYEIA+DKSQK           KVLGP G  Y  + +  
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVLGPYGGGYDMNQNEP 120

[Close]

BLAST of CmoCh03G003730 vs. TAIR 10
Match: AT3G08990.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 159.5 bits (402), Expect = 1.7e-39
Identity = 74/128 (57.81%), Postives = 94/128 (73.44%), Query Frame = 0


Query: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
           MGRL +  LEG  YSCK+C+TH A+  DIIS++FHC+HG+AYLF+N+VNVTVGE E R++
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQK----------LKVLGPDGNSYLASHDPQ 119
           ITG HTV DIFCV CGS++GWKYEIA+DKSQK           KVLGP G  Y  + +  
Sbjct: 61  ITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVLGPYGGGYDMNQNEP 120

[Close]

BLAST of CmoCh03G003730 vs. TAIR 10
Match: AT2G40110.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 156.0 bits (393), Expect = 1.9e-38
Identity = 65/94 (69.15%), Postives = 79/94 (84.04%), Query Frame = 0


Query: 1  MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
          MGRL +  LEG  YSCKHCKTHLA  EDIIS++FHC+HGKAYLFN + NV++GE E+R++
Sbjct: 1  MGRLFVVNLEGKIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLM 60

Query: 61 ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKLK 95
          +TG HTV DIFCV CGSI+GWKYE AH+K+QK K
Sbjct: 61 MTGKHTVADIFCVSCGSIVGWKYETAHEKNQKYK 94

[Close]

BLAST of CmoCh03G003730 vs. TAIR 10
Match: AT3G55890.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 154.5 bits (389), Expect = 5.5e-38
Identity = 75/125 (60.00%), Postives = 91/125 (72.80%), Query Frame = 0


Query: 1   MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRML 60
           MGR+ +  LEGN Y CK CKTHL+  +DI+S++F C++G+AYLFNN+VNV+VGE E RM+
Sbjct: 1   MGRVFMVDLEGNIYICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNVSVGEKEDRMM 60

Query: 61  ITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKLKVLGPDGNSYL------ASHDPQLAGS 120
           ITGLH VVDIFCVGCGS +GWKYE AH+KSQK K    +G S L        HD     S
Sbjct: 61  ITGLHNVVDIFCVGCGSNVGWKYEFAHEKSQKYK----EGKSVLELYKISGPHDSNDLVS 120

The following BLAST results are available for this feature:

BLAST of CmoCh03G003730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59234	7.8e-45	64.06	Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q9SR97	2.4e-38	57.81	Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 ...	[more]
Q9LY56	7.8e-37	60.00	Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 ...	[more]
Q9C777	1.3e-36	55.81	Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 ...	[more]
Q9FN32	4.9e-31	58.51	Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 ...	[more]

BLAST of CmoCh03G003730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GG37	4.7e-61	92.25	Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111453845 PE=3 SV=1	[more]
A0A6J1IPR3	3.4e-59	90.77	Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111478339 PE=3 SV=1	[more]
A0A1S4DWV3	2.0e-51	76.74	Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103491186 PE=3 SV=1	[more]
A0A0A0L2L2	4.4e-51	77.17	Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_4G308560 PE=3 SV=1	[more]
A0A6J1DDY1	2.4e-49	74.42	Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111019496 PE=3 SV=1	[more]

BLAST of CmoCh03G003730 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033778.1	1.0e-62	99.16	Chlorophyll a-b binding protein CP29.2, chloroplastic [Cucurbita argyrosperma su...	[more]
XP_022950878.1	9.7e-61	92.25	protein yippee-like [Cucurbita moschata] >XP_022950879.1 protein yippee-like [Cu...	[more]
XP_023543326.1	2.8e-60	91.47	protein yippee-like [Cucurbita pepo subsp. pepo] >XP_023543327.1 protein yippee-...	[more]
KAG6603593.1	1.4e-59	90.70	hypothetical protein SDJN03_04202, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022978314.1	7.0e-59	90.77	protein yippee-like [Cucurbita maxima] >XP_022978315.1 protein yippee-like [Cucu...	[more]

BLAST of CmoCh03G003730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40110.1	2.0e-43	60.00	Yippee family putative zinc-binding protein	[more]
AT3G08990.1	1.7e-39	57.81	Yippee family putative zinc-binding protein	[more]
AT3G08990.2	1.7e-39	57.81	Yippee family putative zinc-binding protein	[more]
AT2G40110.2	1.9e-38	69.15	Yippee family putative zinc-binding protein	[more]
AT3G55890.1	5.5e-38	60.00	Yippee family putative zinc-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004910	Yippee/Mis18/Cereblon	PFAM	PF03226	Yippee-Mis18	coord: 14..92 e-value: 2.3E-11 score: 43.8
None	No IPR available	PANTHER	PTHR13848:SF67	PROTEIN YIPPEE-LIKE	coord: 1..119
IPR039058	Yippee family	PANTHER	PTHR13848	PROTEIN YIPPEE-LIKE CG15309-RELATED	coord: 1..119
IPR034751	Yippee domain	PROSITE	PS51792	YIPPEE	coord: 12..109 score: 39.769585

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G003730.1	CmoCh03G003730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000151	ubiquitin ligase complex
molecular_function	GO:0046872	metal ion binding