
CmoCh03G003730 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCATAGAAACTGGTATTGATCGAATTATTTTTTTCTCGATTACTCGTTGAATCCATTTGTGACCGCCAGCGACGATCATCGGATTCTGATTCCACTTCCTCTTTTTCCTCTGTTTCAGCCTTCCCTGAATTTGCTTTGTAAGGTTGATCATGCCGATCTTTGTCTTGTTATTGTTGTTCTTCTTCAGTAGATCGATTTCTAGTAATTTTTCTTTGTTTTTCCGATTCTTGTATACTTGTTTCTCTTCGAACAGAAGCTGATTGGTAGAGATATTGCTGCAAGGAGAGGAGATGGGAAGGCTACTTTTGACTACTCTGGAAGGAAATTTCTATAGTTGCAAACACTGTAAAACTCATCTCGCCCTTCAGGAAGACATAATTTCAAGGGTATCTAATTCAATTACTCTATTCCACATGCACATTTGAGTAGCACATTTGATCTTTTTGCTGATATTTTTTTGTATTGTGTTGATATTGTTATTGAGTTGTGTTTGATTGAGACTAACCAATGAGTGTTGATGATGAAAGTCCCACATCTCCTAATTTAGGAAATGATCATGGATTTATAATCAAAGAATACTCTCTCCATTGGAGTGAGGCCTTTTGGGGAAGGCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGAACAATATCATACCATTGTGGAGAGTCATGTTCATCTAACATGGCATCAGAGCCATGCCCTAAACTTAGTCGTGCCAATAGATTGGTAAATCCTTAAAAATGTCGAACAAAGGACTCCAAAGGAAAAAGGAGTCGAGCTTCGATTAAGGGGAGACGTACTTTGTTCGAGGGGAGGTGTTGGATGATGAAAGTCTCACATCTCCTAATTTGGGAAATGATCATGGGTTTATAATCAAAGTATACTCTCTAGTGAGGCCTTTTGGGGAAGCCCAAAGCACAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCATGTTCATCTTACAGTGAGTAACGGTTTGTTTCGAGTGTTTATTTTGGTAAGAGGAAATCGGTATCTATAGGAAAAAGAGTCTTTAATGCTCTAAAAGATTGATTCAATGCTTTGGACCACGTATCCGTTTTGAGAATTTTGATTCCTCGCTTTTGAATGCTCCGTATACCTTTTTAGCTTACATTTATAAACTAGGAACTATGAGAAAATTGTTCTTCGTTTAATCCTTAATCCTGTCTTAGTCTTTTGCTTGTAGTGCTTAATTTGCTGCCTGGATTGTTCTGTTTCTTTGTTCAATTAGTTCTGCATTCATCGAGTGATTTAGAACATCACAGATTTGCCTTGTACATTTAACGATAGGATTTGTTGCGCATATGGTGATCGATTTTATCATACTTATCAGAAGTATTAGATGCATGAATAGTGCTAATAGTGTTGAGGATTGTTTGGAGGGGGTCCCACATGAGCTAATCAAGGGGTTGATCATGAGTTTATAAGTAAGGAATACATCAGTTTATAAGTAAGGAATACATCTCTATTGGTATGAGGCTTTCGGAGAAACTAAAAGCAAAGCCATGAAAGTTTATGTTCAGAGTGGACAATATCATACTATTGTGGAGAGTTGAGATTTCTAACAAATAGGGATTCTAATTGCATTCTCATTCCAGTATTCGTACGACTGCCCTTTACAATACTCCCTTTTCCTGAAGATGACTCCATCCACCCATATAATTTCTTGTAGATTCCAAGTAATTTTCGTTATGTGAGTGATAAGAATTTTAGTCTTTTTTCTATTGAATATGTTTGGTCGTTTGTGGCTTTTTCTAATTCACATTCATCAGAATCTTTATGTGGCTGCTGATGTGCTTTTAGAACTTGTTTTTATTGTATAAAATGGTTTGCTGATTTCAGCATTGGTATCTTTATGTCGAGCACTAGATTGCTCCTTATTTTGAGATGCTAAAGGACCTACCTATATCAGTGAATCCCACACTGCATTCATGATAGATGCTATGCTTTTTCAATCTCATAACTACTTCATAATATAACAACAAAATTCGATCCCGAGAACTTTTACTTTTATATTTTGTAGCGGCCCAAGCAAAGTACTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCGAGGTTTTTAAAACGTGTTTACTATGGAGAGGTTTTCACACACTTATAAATAATGATCTGTTCCCCTCTCCAACCGATTTGGGATCTCACAATCCACCTCCCTTGAGACCAGTGTACTCGCTGGCACTCGTTCTCCTCACTAATCGACGTGGGATCTCACATATTTGCATCCCTAATCTTTTTTTTACACTTATGCATATTATAGTATCAGAAAGATACATGGATATACTAACAGAATTCTGCTTTGCTTTTGTTACAGACTTTTCATTGCAGGCATGGGAAGGCGTACTTGTTTAATAACATGTGAGCTTACTCTTTGGTGTTCAATTTTTTTCTCTATGAAAACTAGGATTTTCATTTTAAAAGAAGTATAACATTTGGTATCTTGATTCACTGGAATCCTGGACGTTTATATAATAGTCTTATTTCCAAGTGCAGAACAAAATGTTTAATGTTTATGGTAGATCAGGTGCTTAAGCTGGAACGAGAATATACCGCTGCTTTTGTTCATCGAATTATTTGCCTACTTCTTCGGATGCGTACTTCGTTTTCTATGATTCATGCTTCTGTTGTTCCGTTGTCCAGTTCTCATTTAAGCCTTTCCTGTTGGAATGGGATTCTGGTCTTTCTTAGTAGTTTATTGTAAACTCCCGACATGCTATGAGCTAATTAACAGTATTAATTCATTGTCGATCGTAAAAGCACGATCTGTAGAACAAAAAAATGATGCTGGTATCTCTGTCTGTGCTTCACCCATTATATTTTGTTTCTGGATTCTTGTGGATGATACTCACATAGGAATTAGATTGGATAGTTCATAGGTGCCCTTAAATTGTTGCATACAGGATATTGTCATACTCATTAAACCTTCCACCAACATTTTGATTTCTATAATGCATCGCAGTGTCAATGTCACAGTTGGAGAACTAGAAAAGCGGATGTTGATCACAGGATTGCACACTGTTGTTGACATATTTTGTGTTGGTTGTGGCTCAATTCTTGGTTGGAAATATGTAAGATCTTCTGTTTCTTTCTTGCTTTCTTTTTTTACCTTTTGGTTTTCAAACCTTTTACTGATACCTCTATCGATTCCAGGAGATTGCACATGACAAATCCCAAAAGTACAAGGAAGGGAAATATATCCTTGAAATGTGAGGCCACTATACTTGGTAGCGTTTTTTAGTTCGAGTTCGGGAGTTCAAACCTCTAATCTCTTTGAGGGATATATGCTTTAAATCAATTGAACTATATCAGTGAGATCCCACATTGATTGGTGATGGGAACAAAACATTCGTTATAAGGATGTGGAAACCTCTTCCTAGTTTCAAAACTTTGAGGAACTTTGAGGGGAAGTCTGAAAGGGGGAGCTCAAACAAGACAATATCTGCTAGCGGTGAGTTTGGGCTATTACAAATGGTATCAGAGCCAGCAAGGACATTGGGTCCCCAAGGGGGATGGATTGTAAAATTCCACCTTGGTTGGAGAGGGGGAACGAAACATTCCTTGTAAGGATGTGGAAACCTCTTTCTAATGGACACATTTTAAAACCTTGAGCGGAAGCTCAAAAGGGAAAGGCCAAAGAGGACAATATATGCTAACCGTGAGCTTGAGCTGATACACTTTGTAGTTTTTATATTGTAAATCTTTGAATCAATGTTGAAACGTTAATGCATCGATTGCGCATCATATATCAAATTTAGAAAACATTATGATCCATCAATCTTTCTGTAAATTATGTGAAGATTTCACCTTTGTATCGCCATGAACACAGTTCTTGACTTCTTTTTGGTCTTTGGGAAAAACTTTGCAGGTTGAAGGTGTTGGGTCCTGATGGAAACAGCTACTTAGCAAGCCATGATCCGCAGCTTGCAGGAAGCGATGGCGACGATGCTTGATCTGCTGTCGAGTTCGGAAGTAGATAAGACCTTCTTTCTCCTTCTCCCATCCCCTTTTTCTTTGTTTCCATCTTATTATTGCCATTTAGCTCTTTCTTAAGCTTTTTGGTACACTGCCACTGCAGTTTTGGCTAGAAGCACAAGAACAACCTTCCTTTTCCAATTCAT TTCATAGAAACTGGTATTGATCGAATTATTTTTTTCTCGATTACTCGTTGAATCCATTTGTGACCGCCAGCGACGATCATCGGATTCTGATTCCACTTCCTCTTTTTCCTCTGTTTCAGCCTTCCCTGAATTTGCTTTGTAAGAAGCTGATTGGTAGAGATATTGCTGCAAGGAGAGGAGATGGGAAGGCTACTTTTGACTACTCTGGAAGGAAATTTCTATAGTTGCAAACACTGTAAAACTCATCTCGCCCTTCAGGAAGACATAATTTCAAGGACTTTTCATTGCAGGCATGGGAAGGCGTACTTGTTTAATAACATTGTCAATGTCACAGTTGGAGAACTAGAAAAGCGGATGTTGATCACAGGATTGCACACTGTTGTTGACATATTTTGTGTTGGTTGTGGCTCAATTCTTGGTTGGAAATATGAGATTGCACATGACAAATCCCAAAAGTTGAAGGTGTTGGGTCCTGATGGAAACAGCTACTTAGCAAGCCATGATCCGCAGCTTGCAGGAAGCGATGGCGACGATGCTTGATCTGCTGTCGAGTTCGGAAGTAGATAAGACCTTCTTTCTCCTTCTCCCATCCCCTTTTTCTTTGTTTCCATCTTATTATTGCCATTTAGCTCTTTCTTAAGCTTTTTGGTACACTGCCACTGCAGTTTTGGCTAGAAGCACAAGAACAACCTTCCTTTTCCAATTCAT ATGGGAAGGCTACTTTTGACTACTCTGGAAGGAAATTTCTATAGTTGCAAACACTGTAAAACTCATCTCGCCCTTCAGGAAGACATAATTTCAAGGACTTTTCATTGCAGGCATGGGAAGGCGTACTTGTTTAATAACATTGTCAATGTCACAGTTGGAGAACTAGAAAAGCGGATGTTGATCACAGGATTGCACACTGTTGTTGACATATTTTGTGTTGGTTGTGGCTCAATTCTTGGTTGGAAATATGAGATTGCACATGACAAATCCCAAAAGTTGAAGGTGTTGGGTCCTGATGGAAACAGCTACTTAGCAAGCCATGATCCGCAGCTTGCAGGAAGCGATGGCGACGATGCTTGA MGRLLLTTLEGNFYSCKHCKTHLALQEDIISRTFHCRHGKAYLFNNIVNVTVGELEKRMLITGLHTVVDIFCVGCGSILGWKYEIAHDKSQKLKVLGPDGNSYLASHDPQLAGSDGDDA Homology
BLAST of CmoCh03G003730 vs. ExPASy Swiss-Prot
Match: P59234 (Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 7.8e-45 Identity = 82/128 (64.06%), Postives = 99/128 (77.34%), Query Frame = 0
BLAST of CmoCh03G003730 vs. ExPASy Swiss-Prot
Match: Q9SR97 (Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 SV=2) HSP 1 Score: 159.5 bits (402), Expect = 2.4e-38 Identity = 74/128 (57.81%), Postives = 94/128 (73.44%), Query Frame = 0
BLAST of CmoCh03G003730 vs. ExPASy Swiss-Prot
Match: Q9LY56 (Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 7.8e-37 Identity = 75/125 (60.00%), Postives = 91/125 (72.80%), Query Frame = 0
BLAST of CmoCh03G003730 vs. ExPASy Swiss-Prot
Match: Q9C777 (Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 1.3e-36 Identity = 72/129 (55.81%), Postives = 92/129 (71.32%), Query Frame = 0
BLAST of CmoCh03G003730 vs. ExPASy Swiss-Prot
Match: Q9FN32 (Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 4.9e-31 Identity = 55/94 (58.51%), Postives = 74/94 (78.72%), Query Frame = 0
BLAST of CmoCh03G003730 vs. ExPASy TrEMBL
Match: A0A6J1GG37 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111453845 PE=3 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 4.7e-61 Identity = 119/129 (92.25%), Postives = 119/129 (92.25%), Query Frame = 0
BLAST of CmoCh03G003730 vs. ExPASy TrEMBL
Match: A0A6J1IPR3 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111478339 PE=3 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 3.4e-59 Identity = 118/130 (90.77%), Postives = 119/130 (91.54%), Query Frame = 0
BLAST of CmoCh03G003730 vs. ExPASy TrEMBL
Match: A0A1S4DWV3 (Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103491186 PE=3 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 2.0e-51 Identity = 99/129 (76.74%), Postives = 110/129 (85.27%), Query Frame = 0
BLAST of CmoCh03G003730 vs. ExPASy TrEMBL
Match: A0A0A0L2L2 (Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_4G308560 PE=3 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 4.4e-51 Identity = 98/127 (77.17%), Postives = 108/127 (85.04%), Query Frame = 0
BLAST of CmoCh03G003730 vs. ExPASy TrEMBL
Match: A0A6J1DDY1 (Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111019496 PE=3 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.4e-49 Identity = 96/129 (74.42%), Postives = 108/129 (83.72%), Query Frame = 0
BLAST of CmoCh03G003730 vs. NCBI nr
Match: KAG7033778.1 (Chlorophyll a-b binding protein CP29.2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 250.0 bits (637), Expect = 1.0e-62 Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of CmoCh03G003730 vs. NCBI nr
Match: XP_022950878.1 (protein yippee-like [Cucurbita moschata] >XP_022950879.1 protein yippee-like [Cucurbita moschata]) HSP 1 Score: 243.4 bits (620), Expect = 9.7e-61 Identity = 119/129 (92.25%), Postives = 119/129 (92.25%), Query Frame = 0
BLAST of CmoCh03G003730 vs. NCBI nr
Match: XP_023543326.1 (protein yippee-like [Cucurbita pepo subsp. pepo] >XP_023543327.1 protein yippee-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 241.9 bits (616), Expect = 2.8e-60 Identity = 118/129 (91.47%), Postives = 119/129 (92.25%), Query Frame = 0
BLAST of CmoCh03G003730 vs. NCBI nr
Match: KAG6603593.1 (hypothetical protein SDJN03_04202, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 239.6 bits (610), Expect = 1.4e-59 Identity = 117/129 (90.70%), Postives = 118/129 (91.47%), Query Frame = 0
BLAST of CmoCh03G003730 vs. NCBI nr
Match: XP_022978314.1 (protein yippee-like [Cucurbita maxima] >XP_022978315.1 protein yippee-like [Cucurbita maxima]) HSP 1 Score: 237.3 bits (604), Expect = 7.0e-59 Identity = 118/130 (90.77%), Postives = 119/130 (91.54%), Query Frame = 0
BLAST of CmoCh03G003730 vs. TAIR 10
Match: AT2G40110.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 172.6 bits (436), Expect = 2.0e-43 Identity = 78/130 (60.00%), Postives = 98/130 (75.38%), Query Frame = 0
BLAST of CmoCh03G003730 vs. TAIR 10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 159.5 bits (402), Expect = 1.7e-39 Identity = 74/128 (57.81%), Postives = 94/128 (73.44%), Query Frame = 0
BLAST of CmoCh03G003730 vs. TAIR 10
Match: AT3G08990.2 (Yippee family putative zinc-binding protein ) HSP 1 Score: 159.5 bits (402), Expect = 1.7e-39 Identity = 74/128 (57.81%), Postives = 94/128 (73.44%), Query Frame = 0
BLAST of CmoCh03G003730 vs. TAIR 10
Match: AT2G40110.2 (Yippee family putative zinc-binding protein ) HSP 1 Score: 156.0 bits (393), Expect = 1.9e-38 Identity = 65/94 (69.15%), Postives = 79/94 (84.04%), Query Frame = 0
BLAST of CmoCh03G003730 vs. TAIR 10
Match: AT3G55890.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 154.5 bits (389), Expect = 5.5e-38 Identity = 75/125 (60.00%), Postives = 91/125 (72.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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