CmoCh03G002670 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCCCCTCGGAGAAACCACAACGATCGGAAAAAATGTCCTTCCCGTTTCATCACCACCATCGCCGTGACGACGAAGAGGACGACGAACGTCGTTATCCTCCGCCGGGATATCGTCCTCCGTACTCCGATCCACCGCCGCCAGTGGTTCCTTCTGTCTACCACACTCATTACGACGGGGCGCCGCCCCCGCCAATGGTTTCCTCCGTCCACCACACTCACTACGACGAGGCACCGCCGCCGCCTCGGCCGTCTTACGCTGCCTTCAACTCCGATTTCCCTCCGGAACCGCCCGTTCCCGACTACGGCTACTCTTCTGGATCGCCGCCGGCGGTCGTGCACCATCACTCTCACCATTCACACTTCCCCTCGGTTATTCACCACCACTCTCATAATTCCAATTCTTCCTTCTCCAACAAGCCGACTGTCAAGGTCTTCACCAAAGCAAACCCTAATTTCTCCCTTGCCATCCGCGACGGCAAAGTCATCCTCGTCCCTTCCGATCCCGACGATCCTGCTCAAGTATGATCGATTTAACCCTTGATCACTTCCAGTTTTCGCCTTAATTTGTAATTAGATCATTCGATTTTTGAAATTCTTCTTTACTCTTTGATTTTAATGGCGTTGATCAATCGTGAATGTTTCAGCACTGGTTCAAGGATGAGAAGTACAGTACGAGGATTAAGGATGAGGCAGGGTACCCCTCCTTCGCTCTGGTCAACAAGGCCACCGGTCAGGCGATGAAGCACTCCGTCGGAGATACTCATCCGGTAAGTTTTTCCTCTCATTCTATTGCCGCTGTTCGTCTTAATTTTTCTGGAAATTGAAATTCTCCGTGATGTTACTGAATGATGGATGAATTTACAGAACCCAGAAAATCATATACCCTATGGTGTAAACTTACCGTGCTTTTTGAAATATTCTATGGTATAAATTGATTAATTATTCCACTAGAAGTCAAGATCTTATATTATAAGTTCTAAGAGATTTTATCCTGAAAAAAGAATTATTATTATATTTAATCTAACAATGAAGTGAAACGTGTTCTTGATCAAAATAAAATAAATCTGGGTTGAAATTAATTAAATATAAGTGGATCATGTATACCTGAGAGGATAAAAGGAAGTACTGTTATCTTCTCTAAAGTTGAATGTGAGATATGTTAAAAGCATTGATTATAATTAAATTTACTGTCATTCATTAGCTTAAACTTTTGGATGATCGGTGATTTAGCTTAGTATCAAAAGCAAGTGGTCTTGTGTTTGATCCTTTGTAATATCATTTCCTTCCCAATAAATATTGGTTTCCACTTGTTGAGTTTTCTGTAAGTTTTCAGATGGGAATTGAGCATGGTGGTGTTTTTTGTATCTGTCCTAGATGAGTTTTTTTTTTTCCTGAAGTTTTTGAGTCAAAACTACAAAAAATGTGGCTACAAGGATTTGAATCATCTGACTTTATGAGAATAAGTACATGGCAATTACTACTTAGCTTATGCTTGTGTTGGTTCCAATTGTATTGACCTGAAGCCCACCGCTAGCAGATATTAATGGTGTGGAAACTTCTCCTCGCAAACGGGTTTTAAAATCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGACACAATATCGGCTAGCGGTGGGCTTTGGGTCGTTACAAATGGTATCAAAGCCAGTCACCGAAGGATGCAAGGCACTGGTCGGAGTAGGGGCTAGATTCTCTTCGTAGTAGATGCGTTTTAAAATCCTTGAGGGGGAAGCCCGAAAGGGAAAGTCCAAAAAGGACAATATGTGCTAGCGGTGGGCTTTGGGTCGTTACAAATGGTATCAAAGCGTCTCACCGAAGGATGCGAGACACTAGTCGGAGTAGGGGCTAGATTCCCTTCGTAGTAGACGCATTTTAAAATCCTTGAGAGGAAGCCCGAAAGGGAAAGTCCAAAGAGGACAATATGTGCTAGCGGTGGGCTTTGGGTCGTTACAAATGGTATCAAAGCGTCTCACCGAAGGATGCGAGACACTAGTCGGAGTAGGGGCTAGATTCTCTTCGTAGTAGACATGTTTTAAATTCCTAGCCCGAAAGGGAAAGTCCAAAGAGGACAATATTTGCTAGCGGTGGACTATGAGTGTAGTAGGTGGATTGAGTCTTTGTTTTGGTTAGTTTGGCCTGTAATTGCTGTTTTTAATTTCTGCTTTTGTGGCGGTTGGGTTAAGATGATTATGTTGCCTGGGTTCGGCATTTTTTGTGATCAAGTTTCATTGGTTGCATCTTGGGGATTTAACATTTCTTGGTAAAGCTTTCGAATTTTGTTTCACGAAAGGTAACAAAATGGAATGCCAAAATCCTAATACCCAACCAAACTGAGTGAAGCAAAGCAACTAAACTCGGTTGGATAGTGAGGATGACATTAGTTCTGTTTGGAATGACGTTAGAAAGTCACTCCAAAACGGCCCCTACAATCAAAACGGACTCACGAAACGAACCAACATGGTAAATACAATGCAGGTACAGCTGATACAATACAACCCTGACGTGGTGGACGAGTCGGTACTGTGGACACAGAGCCAGGACTTTGGGGAAGGGTTCAGATCCATAAGGATGGTGAATAACATTGCGTTGAATGTTGATGCTTTTCATGGGGACAAATACTCTGGTGGAGTTCACGACGGCACCAAAATTGTCCTTTGGAAATGGAAGGAAGGAGAGAACCAACTATGGAAGATCGTACCCTACTGTAAGTTCTTTTTCTTGCCCCTACTGCCCTTTTATGCCAAATAAAACTGTGCTTGCATTGATTTGAAATCATTCTCTCGTTTTCCTTGCTGTTGAATTTCTGGGTCTGAAGCCTAAACAAGAATTAGATTGTTCGTTCTACTTTAGTTTAAAATACAAATAGAGTCGGTTTAGTTCATAAATTCTTTTAGTCGAGTGATCTACCTACTAGTCCCAAAATAAAAAATTCAAGGACCCGTTAGACACTTTTTGAAATTCAAGAACTTTTTATACACAAACTTGCCGTTTGAAGACTAAACTCGAACTGGAATTCTTTTTTATTTCTTATCTAGGATGGTTTCATATATTTATCTTATTATATAGAAGAAAAATATGAGATCATTCATGTTGGTAACCTTACATTAGAAAGATGGGAAAACTTGCATGCTATTCTTCACATTGTTAATTGATTTTGAGATATTGAGATAGAACTCCAGATAGCATCTTAGTCCATGATGCCCAAACTAATATTTGGCCTCCAAAAAAATGGAATCCGACTCGAGAATGATAAAGCCATAAAAACACCATCTTGAGAGGCACGTCGAAGATCGACATTGGAAAGATGGGAAGATCTTACAATTTTTATGAACTACATGAACAATATATCATACGTGTTTAAAGGAGGTTTAAGCTAGCTTAGCTTAGTGAGTTGACTTCATTCTTGAGCTTTGATTTTATGAATTGAAGCTAATAATCTTTAATTAGTCCAGGGTATACATGAGATGGTCCTTGTAGCATTTTACAAGTGAATTGGGCGTTTTGTGGCTAGGTTCCATTTGCATCTATGATTGATACAAAATTGAATTATTGACTTTAGATATGGTAATCAGTAAGTTAGTCACCGAACTATGCTTGAATTGACGTTAAGAACAACCTGAGCTTGATTGATATTTCGTTTCGATATTGAAAATTTGAAACTTTGACTGATTACTTTTATCTTTTTGGGGTACAAACAGGAGGATGTGATCAGACAGATAAAAGGAGGGAGGGGGTATGCTATGCAGTGGAATGGGTAATGCGACGCTGAAAATAAAGGTATTCTCTTGGGTGTTGAGAAGCCATATTTTATGAATTTCAAGTGTGGAATATGAATATAATTTGGGGTTTGGCTTTAGCAATTAGCATGGATTTGGATGCTAGTTTGGTGTGTGTGAGGTCACTCACTCGCAATCTATGTCCATGTAAAGTATTAGCATGATATCAATCTATGTCCATGTCCTATTTTGGTACGAGCCCCGGTTGATCAGTTGACAACATACAACCATACGATAGGATATGTTATGATAACGGAGCACACGGGGGTCGTGTTAGATTGGATTGTTGGACCAACTCGAAATTTGGTTGGTGTCCCGAACAAATAGAGTAGAGTACAGGAATGAACACCACCAACTCTTTATTTCCATGTTGGGTCATTCGTTTTATACTTATTTTAAAAGATTTTAATTATCCTATCTTATAACTAAAATCTTATACAGTT ATCCCCTCGGAGAAACCACAACGATCGGAAAAAATGTCCTTCCCGTTTCATCACCACCATCGCCGTGACGACGAAGAGGACGACGAACGTCGTTATCCTCCGCCGGGATATCGTCCTCCGTACTCCGATCCACCGCCGCCAGTGGTTCCTTCTGTCTACCACACTCATTACGACGGGGCGCCGCCCCCGCCAATGGTTTCCTCCGTCCACCACACTCACTACGACGAGGCACCGCCGCCGCCTCGGCCGTCTTACGCTGCCTTCAACTCCGATTTCCCTCCGGAACCGCCCGTTCCCGACTACGGCTACTCTTCTGGATCGCCGCCGGCGGTCGTGCACCATCACTCTCACCATTCACACTTCCCCTCGGTTATTCACCACCACTCTCATAATTCCAATTCTTCCTTCTCCAACAAGCCGACTGTCAAGGTCTTCACCAAAGCAAACCCTAATTTCTCCCTTGCCATCCGCGACGGCAAAGTCATCCTCGTCCCTTCCGATCCCGACGATCCTGCTCAACACTGGTTCAAGGATGAGAAGTACAGTACGAGGATTAAGGATGAGGCAGGGTACCCCTCCTTCGCTCTGGTCAACAAGGCCACCGGTCAGGCGATGAAGCACTCCGTCGGAGATACTCATCCGGTACAGCTGATACAATACAACCCTGACGTGGTGGACGAGTCGGTACTGTGGACACAGAGCCAGGACTTTGGGGAAGGGTTCAGATCCATAAGGATGGTGAATAACATTGCGTTGAATGTTGATGCTTTTCATGGGGACAAATACTCTGGTGGAGTTCACGACGGCACCAAAATTGTCCTTTGGAAATGGAAGGAAGGAGAGAACCAACTATGGAAGATCGTACCCTACTGAGGATGTGATCAGACAGATAAAAGGAGGGAGGGGGTATGCTATGCAGTGGAATGGGTAATGCGACGCTGAAAATAAAGGTATTCTCTTGGGTGTTGAGAAGCCATATTTTATGAATTTCAAGTGTGGAATATGAATATAATTTGGGGTTTGGCTTTAGCAATTAGCATGGATTTGGATGCTAGTTTGGTGTGTGTGAGGTCACTCACTCGCAATCTATGTCCATGTAAAGTATTAGCATGATATCAATCTATGTCCATGTCCTATTTTGGTACGAGCCCCGGTTGATCAGTTGACAACATACAACCATACGATAGGATATGTTATGATAACGGAGCACACGGGGGTCGTGTTAGATTGGATTGTTGGACCAACTCGAAATTTGGTTGGTGTCCCGAACAAATAGAGTAGAGTACAGGAATGAACACCACCAACTCTTTATTTCCATGTTGGGTCATTCGTTTTATACTTATTTTAAAAGATTTTAATTATCCTATCTTATAACTAAAATCTTATACAGTT ATGTCCTTCCCGTTTCATCACCACCATCGCCGTGACGACGAAGAGGACGACGAACGTCGTTATCCTCCGCCGGGATATCGTCCTCCGTACTCCGATCCACCGCCGCCAGTGGTTCCTTCTGTCTACCACACTCATTACGACGGGGCGCCGCCCCCGCCAATGGTTTCCTCCGTCCACCACACTCACTACGACGAGGCACCGCCGCCGCCTCGGCCGTCTTACGCTGCCTTCAACTCCGATTTCCCTCCGGAACCGCCCGTTCCCGACTACGGCTACTCTTCTGGATCGCCGCCGGCGGTCGTGCACCATCACTCTCACCATTCACACTTCCCCTCGGTTATTCACCACCACTCTCATAATTCCAATTCTTCCTTCTCCAACAAGCCGACTGTCAAGGTCTTCACCAAAGCAAACCCTAATTTCTCCCTTGCCATCCGCGACGGCAAAGTCATCCTCGTCCCTTCCGATCCCGACGATCCTGCTCAACACTGGTTCAAGGATGAGAAGTACAGTACGAGGATTAAGGATGAGGCAGGGTACCCCTCCTTCGCTCTGGTCAACAAGGCCACCGGTCAGGCGATGAAGCACTCCGTCGGAGATACTCATCCGGTACAGCTGATACAATACAACCCTGACGTGGTGGACGAGTCGGTACTGTGGACACAGAGCCAGGACTTTGGGGAAGGGTTCAGATCCATAAGGATGGTGAATAACATTGCGTTGAATGTTGATGCTTTTCATGGGGACAAATACTCTGGTGGAGTTCACGACGGCACCAAAATTGTCCTTTGGAAATGGAAGGAAGGAGAGAACCAACTATGGAAGATCGTACCCTACTGA MSFPFHHHHRRDDEEDDERRYPPPGYRPPYSDPPPPVVPSVYHTHYDGAPPPPMVSSVHHTHYDEAPPPPRPSYAAFNSDFPPEPPVPDYGYSSGSPPAVVHHHSHHSHFPSVIHHHSHNSNSSFSNKPTVKVFTKANPNFSLAIRDGKVILVPSDPDDPAQHWFKDEKYSTRIKDEAGYPSFALVNKATGQAMKHSVGDTHPVQLIQYNPDVVDESVLWTQSQDFGEGFRSIRMVNNIALNVDAFHGDKYSGGVHDGTKIVLWKWKEGENQLWKIVPY Homology
BLAST of CmoCh03G002670 vs. ExPASy Swiss-Prot
Match: Q945P1 (Ricin B-like lectin EULS3 OS=Arabidopsis thaliana OX=3702 GN=EULS3 PE=1 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 4.9e-66 Identity = 154/317 (48.58%), Postives = 191/317 (60.25%), Query Frame = 0
BLAST of CmoCh03G002670 vs. ExPASy Swiss-Prot
Match: Q6Z4N4 (Ricin B-like lectin R40G3 OS=Oryza sativa subsp. japonica OX=39947 GN=R40G3 PE=2 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 2.6e-59 Identity = 109/189 (57.67%), Postives = 138/189 (73.02%), Query Frame = 0
BLAST of CmoCh03G002670 vs. ExPASy Swiss-Prot
Match: Q10M12 (Ricin B-like lectin R40C1 OS=Oryza sativa subsp. japonica OX=39947 GN=R40C1 PE=1 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 2.5e-54 Identity = 97/177 (54.80%), Postives = 128/177 (72.32%), Query Frame = 0
BLAST of CmoCh03G002670 vs. ExPASy Swiss-Prot
Match: Q6Z4N6 (Ricin B-like lectin R40G2 OS=Oryza sativa subsp. japonica OX=39947 GN=R40G2 PE=2 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 4.8e-53 Identity = 92/165 (55.76%), Postives = 122/165 (73.94%), Query Frame = 0
BLAST of CmoCh03G002670 vs. ExPASy TrEMBL
Match: A0A6J1GEM1 (ricin B-like lectin R40G3 OS=Cucurbita moschata OX=3662 GN=LOC111453449 PE=4 SV=1) HSP 1 Score: 582.4 bits (1500), Expect = 1.0e-162 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of CmoCh03G002670 vs. ExPASy TrEMBL
Match: A0A6J1ITL7 (ricin B-like lectin R40G3 OS=Cucurbita maxima OX=3661 GN=LOC111478294 PE=4 SV=1) HSP 1 Score: 572.4 bits (1474), Expect = 1.0e-159 Identity = 273/279 (97.85%), Postives = 275/279 (98.57%), Query Frame = 0
BLAST of CmoCh03G002670 vs. ExPASy TrEMBL
Match: A0A1S3B4K8 (extensin OS=Cucumis melo OX=3656 GN=LOC103485969 PE=4 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 7.3e-121 Identity = 216/282 (76.60%), Postives = 239/282 (84.75%), Query Frame = 0
BLAST of CmoCh03G002670 vs. ExPASy TrEMBL
Match: A0A0A0KYQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G193240 PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 2.3e-119 Identity = 210/279 (75.27%), Postives = 236/279 (84.59%), Query Frame = 0
BLAST of CmoCh03G002670 vs. ExPASy TrEMBL
Match: A0A6J1DST7 (ricin B-like lectin R40G3 OS=Momordica charantia OX=3673 GN=LOC111023166 PE=4 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 2.6e-110 Identity = 197/279 (70.61%), Postives = 231/279 (82.80%), Query Frame = 0
BLAST of CmoCh03G002670 vs. NCBI nr
Match: XP_022950338.1 (ricin B-like lectin R40G3 [Cucurbita moschata]) HSP 1 Score: 582.4 bits (1500), Expect = 2.1e-162 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of CmoCh03G002670 vs. NCBI nr
Match: KAG6603498.1 (Ricin B-like lectin EULS3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 580.1 bits (1494), Expect = 1.0e-161 Identity = 277/279 (99.28%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of CmoCh03G002670 vs. NCBI nr
Match: KAG7033678.1 (Ricin B-like lectin EULS3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 579.7 bits (1493), Expect = 1.3e-161 Identity = 276/279 (98.92%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of CmoCh03G002670 vs. NCBI nr
Match: XP_023544941.1 (ricin B-like lectin R40G3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 575.1 bits (1481), Expect = 3.3e-160 Identity = 275/279 (98.57%), Postives = 278/279 (99.64%), Query Frame = 0
BLAST of CmoCh03G002670 vs. NCBI nr
Match: XP_022978259.1 (ricin B-like lectin R40G3 [Cucurbita maxima]) HSP 1 Score: 572.4 bits (1474), Expect = 2.1e-159 Identity = 273/279 (97.85%), Postives = 275/279 (98.57%), Query Frame = 0
BLAST of CmoCh03G002670 vs. TAIR 10
Match: AT2G39050.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 252.7 bits (644), Expect = 3.5e-67 Identity = 154/317 (48.58%), Postives = 191/317 (60.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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