CmoCh03G002590 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G002590
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ARM repeat superfamily protein
Location	Cmo_Chr03: 3894939 .. 3897917 (-)
RNA-Seq Expression	CmoCh03G002590
Synteny	CmoCh03G002590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATCAGACAGCTCCAAACCCATAAATTCAAATCCATCAAAATCCCTAATTTCTTTCTCTTTCACTCTTCTTCTTTGCTACTGATTCAACATAATCTTCCACGGTTTTTGTTCAGTCATGCATCTCTACGCCATGAAAGCAACTCCAGAAACTCAAAGGTATTCTTTCTTTTTCTTCGATTTGGTGCTTTTTTCAGAATACCCTTTTGCTCAGAAACCGAAACCCACTTTCCAGTAAATGTTTCTTCAACTGTTCTGTATAGATTTAGTTTCGGGGTTTTGTTTTTTTGAGATACCCGTCAGGTGTTTGTTTAAAATCCTGACTGAAACTGTAGGGTAGTTTAGTCTGAAGCGTTTGTTTTGATTTGTATCAGGTCTGTTATAAGCAAACATTTGGTTTTGTTTTTTTTTTTTTTTGGTGTCCGTCAGGTGTTTGTTTAAAGTCTTGACTGAAACTGTAGGATAGTTTACTCTGAAGCGTTTGTTTTGATTTGTTTCAGGTCTTTTATGAGCAAATGGTTTTGTTTTTTTGAGGTGCCCGTCAGGTGTTTGTTTAAAATACTGACTGAAACTGTAGGGTAGTTTAGTCTGAAGCGTTTGTTTTGATGTCTTTCAGGTCTTTTATGAGTAAAAATTTGAGTCCAATCCTTCGGCGGGAATTTGCTAATCTTGATAAAGATGCTGATACTCGTCGATCGGCGATGAAGGCGTTGAAAACTTACGTGAAGGAACTGGACTCCAAGGCTATCCCTGTTTTTCTTGCTCAAGTTTCTGAGAACAAAGAAACTGGTGCATTAACAGGGGAGTGCACCATTTCTCTCTATGAAGTTCTAGCTCGTGTTCATGGCGTTAATATCGTGCCGCAGATTGATCGGATCATGAGTTCTATAATCAAAACTTTGGCTTCAAGTGCTGGCTCTTTCCCTCTTCAGCAGGCTTGCTCAAAGGTTGTTCCAGCGATTGCAAGATATGGGATCGACCCCACCACTCCTGATGATAAGAAAAGGCATGTTATTCACTCTCTTTGTAATCCACTTTCAGAATCTTTGTTGGGTTCTCAAGAGAGCCTTACTTATGGGGCTGCCCTTTGCTTGAAAGCTCTGGTGGATTCGGATAATTGGCGGTTCGCTTCCGATGAGATGGTTAACAAGGTTTGCCAGAATGTTGCTGGAGCTCTTGAGGAGCAATCTACACAGACCAATTCTCATATGGGGCTTGTTATGACACTAGCTAAGAGAAATCCTCGGATCGTCGAACCGTATGCTAGATTGTTGTTGCAGGCAGGGCTGCAGATCTTGAAGTGTGGGGTAGTAGAGAAGAATTCTCAGAAAAGGTTGTCTGCTATTCAAATGATCAATTTCTTGATGAAATGCTTGGATCCTTGGAGTATATTTTCGGAGCTTCAGGCTATAATTGAGGAGATGGAGAATTGTCAGTTTGATCAAATGGCCTATGTCAAAGGTGCAGCTTATGAAACTCTACAAACGGCTAAGAGGATATCCGCTGATAAAGTGTCTAAAATGGATAAATCTCCAAGCTCAGTGACTGGATCGAACTTCATTGATGGCAGGCGAAGTCCATGGAGGAATGGTGGAAGACGAACTCCCTCGTCCGAGTCTCCCGAATCTCGAACGCTTGATTCATTCTTTGATTATGGCTCGCTTGTTGGATCACCTTTTTCATCAGTACAAGCTTCTCGTAACTCAGGATTCGACCGTGGGAGCGTGAATCGTAAACTTTGGAGTTATGAGAATGGTGGGGTTGATATATCCCTCAAGGATGGCTTGCCTTTGTTCTCAGAAGCTGCTCGTGAAACCGACGTTTCCGACACGATGTCTGTGCACTCTGGAAATCACAAATTTGGCCATAATGGTGAAGAATATGCTGATGATTTTACGGGGTTTTTTCAAATGAGTCCTCTTAAACGCAGACTCTCACGAAGTACTTCAACCAGCCCACTCGTAAGTTCTCTCAACTCAGTACTCTTTTACATTTAATACTTATGGCTAAATTGGGGAGGAGAACGAAACACCTTTTATAAGGGTGTGGAAACCTCTACCTAGTAGACATGTTTTAAAAATCTGGAGGGGAAGCCCAAAAGAAATAGCCCAAAGAGGACAATATCTGCTCATGGTGGGATTGGGCCGTTACGTGTCCCAAAAGAATGATGATAGTTTATGTTCCATTTGTATTGTGATGGCGATTTGGTTCATGTCAATTCTAGTTTAGTTCCATAATGTTCATTAGCTTATACCAAAATCTTTCCTATCTCGTACCTCAGCGGACTCGAAACAACATAGATGTCGAAAACACGATCTTCAACACTCCTCGGAAGCTTGTCCATTCCCTTCAGGATCGAAACGATGGGAGCTCTGACTATGCTAGCAAAAGTTGCAGACACAGACGAGGGAGTTTATCATCAGGCAATTTGGAGTGGAGTCCTCCAGATGATCAGAAACTCAGCAAAGACAGCTTAGACGACAACGGCGAGCAATCACACGGCGGCTCCGAATCAATCTCTTCAATTGATGGTGTCCCTGCCCATGGTGAAGTCCAAGCTGCTATACCTGTGGCAGTGGCTTGTCATAGTAAACTCAAACCTCAATGTACAGGCATTGAGATGGCATGTAAGAAAACTGGTTTGAAATTGGTCTGTGGCTTCTCAATTTTTCTTTTCACAATATTCACTTCATTGCTTTGGATTGATGATCGTGCCCAAGGCTCCTATCTTGTACCAACATAGTGTTCTTGCCTCACCTGGAATTGGCTTTAGAAGTTAGAAGCAAAAGCAAATCTATTAGAGATCGATTTGGATAATCCTCACGTTCTTGAGCTGTAATCTCGAGTTTAGTTCATTTTGGTCCCGTTGTTTATAATTTTTTGTTTATTTAGTCACTTACTCGGTGTCTTTGATACTCAACTTTTTCTTTGTTGTTTGTAATTATTGCCCGTGTATGCATTTTTCGACCCCAAAAGTAG

mRNA sequence

CAAATCAGACAGCTCCAAACCCATAAATTCAAATCCATCAAAATCCCTAATTTCTTTCTCTTTCACTCTTCTTCTTTGCTACTGATTCAACATAATCTTCCACGGTTTTTGTTCAGTCATGCATCTCTACGCCATGAAAGCAACTCCAGAAACTCAAAGGTCTTTTATGAGTAAAAATTTGAGTCCAATCCTTCGGCGGGAATTTGCTAATCTTGATAAAGATGCTGATACTCGTCGATCGGCGATGAAGGCGTTGAAAACTTACGTGAAGGAACTGGACTCCAAGGCTATCCCTGTTTTTCTTGCTCAAGTTTCTGAGAACAAAGAAACTGGTGCATTAACAGGGGAGTGCACCATTTCTCTCTATGAAGTTCTAGCTCGTGTTCATGGCGTTAATATCGTGCCGCAGATTGATCGGATCATGAGTTCTATAATCAAAACTTTGGCTTCAAGTGCTGGCTCTTTCCCTCTTCAGCAGGCTTGCTCAAAGGTTGTTCCAGCGATTGCAAGATATGGGATCGACCCCACCACTCCTGATGATAAGAAAAGGCATGTTATTCACTCTCTTTGTAATCCACTTTCAGAATCTTTGTTGGGTTCTCAAGAGAGCCTTACTTATGGGGCTGCCCTTTGCTTGAAAGCTCTGGTGGATTCGGATAATTGGCGGTTCGCTTCCGATGAGATGGTTAACAAGGTTTGCCAGAATGTTGCTGGAGCTCTTGAGGAGCAATCTACACAGACCAATTCTCATATGGGGCTTGTTATGACACTAGCTAAGAGAAATCCTCGGATCGTCGAACCGTATGCTAGATTGTTGTTGCAGGCAGGGCTGCAGATCTTGAAGTGTGGGGTAGTAGAGAAGAATTCTCAGAAAAGGTTGTCTGCTATTCAAATGATCAATTTCTTGATGAAATGCTTGGATCCTTGGAGTATATTTTCGGAGCTTCAGGCTATAATTGAGGAGATGGAGAATTGTCAGTTTGATCAAATGGCCTATGTCAAAGGTGCAGCTTATGAAACTCTACAAACGGCTAAGAGGATATCCGCTGATAAAGTGTCTAAAATGGATAAATCTCCAAGCTCAGTGACTGGATCGAACTTCATTGATGGCAGGCGAAGTCCATGGAGGAATGGTGGAAGACGAACTCCCTCGTCCGAGTCTCCCGAATCTCGAACGCTTGATTCATTCTTTGATTATGGCTCGCTTGTTGGATCACCTTTTTCATCAGTACAAGCTTCTCGTAACTCAGGATTCGACCGTGGGAGCGTGAATCGTAAACTTTGGAGTTATGAGAATGGTGGGGTTGATATATCCCTCAAGGATGGCTTGCCTTTGTTCTCAGAAGCTGCTCGTGAAACCGACGTTTCCGACACGATGTCTGTGCACTCTGGAAATCACAAATTTGGCCATAATGGTGAAGAATATGCTGATGATTTTACGGGGTTTTTTCAAATGAGTCCTCTTAAACGCAGACTCTCACGAAGTACTTCAACCAGCCCACTCCGGACTCGAAACAACATAGATGTCGAAAACACGATCTTCAACACTCCTCGGAAGCTTGTCCATTCCCTTCAGGATCGAAACGATGGGAGCTCTGACTATGCTAGCAAAAGTTGCAGACACAGACGAGGGAGTTTATCATCAGGCAATTTGGAGTGGAGTCCTCCAGATGATCAGAAACTCAGCAAAGACAGCTTAGACGACAACGGCGAGCAATCACACGGCGGCTCCGAATCAATCTCTTCAATTGATGGTGTCCCTGCCCATGGTGAAGTCCAAGCTGCTATACCTGTGGCAGTGGCTTGTCATAGTAAACTCAAACCTCAATGTACAGGCATTGAGATGGCATGTAAGAAAACTGGTTTGAAATTGGTCTGTGGCTTCTCAATTTTTCTTTTCACAATATTCACTTCATTGCTTTGGATTGATGATCGTGCCCAAGGCTCCTATCTTGTACCAACATAGTGTTCTTGCCTCACCTGGAATTGGCTTTAGAAGTTAGAAGCAAAAGCAAATCTATTAGAGATCGATTTGGATAATCCTCACGTTCTTGAGCTGTAATCTCGAGTTTAGTTCATTTTGGTCCCGTTGTTTATAATTTTTTGTTTATTTAGTCACTTACTCGGTGTCTTTGATACTCAACTTTTTCTTTGTTGTTTGTAATTATTGCCCGTGTATGCATTTTTCGACCCCAAAAGTAG

Coding sequence (CDS)

ATGCATCTCTACGCCATGAAAGCAACTCCAGAAACTCAAAGGTCTTTTATGAGTAAAAATTTGAGTCCAATCCTTCGGCGGGAATTTGCTAATCTTGATAAAGATGCTGATACTCGTCGATCGGCGATGAAGGCGTTGAAAACTTACGTGAAGGAACTGGACTCCAAGGCTATCCCTGTTTTTCTTGCTCAAGTTTCTGAGAACAAAGAAACTGGTGCATTAACAGGGGAGTGCACCATTTCTCTCTATGAAGTTCTAGCTCGTGTTCATGGCGTTAATATCGTGCCGCAGATTGATCGGATCATGAGTTCTATAATCAAAACTTTGGCTTCAAGTGCTGGCTCTTTCCCTCTTCAGCAGGCTTGCTCAAAGGTTGTTCCAGCGATTGCAAGATATGGGATCGACCCCACCACTCCTGATGATAAGAAAAGGCATGTTATTCACTCTCTTTGTAATCCACTTTCAGAATCTTTGTTGGGTTCTCAAGAGAGCCTTACTTATGGGGCTGCCCTTTGCTTGAAAGCTCTGGTGGATTCGGATAATTGGCGGTTCGCTTCCGATGAGATGGTTAACAAGGTTTGCCAGAATGTTGCTGGAGCTCTTGAGGAGCAATCTACACAGACCAATTCTCATATGGGGCTTGTTATGACACTAGCTAAGAGAAATCCTCGGATCGTCGAACCGTATGCTAGATTGTTGTTGCAGGCAGGGCTGCAGATCTTGAAGTGTGGGGTAGTAGAGAAGAATTCTCAGAAAAGGTTGTCTGCTATTCAAATGATCAATTTCTTGATGAAATGCTTGGATCCTTGGAGTATATTTTCGGAGCTTCAGGCTATAATTGAGGAGATGGAGAATTGTCAGTTTGATCAAATGGCCTATGTCAAAGGTGCAGCTTATGAAACTCTACAAACGGCTAAGAGGATATCCGCTGATAAAGTGTCTAAAATGGATAAATCTCCAAGCTCAGTGACTGGATCGAACTTCATTGATGGCAGGCGAAGTCCATGGAGGAATGGTGGAAGACGAACTCCCTCGTCCGAGTCTCCCGAATCTCGAACGCTTGATTCATTCTTTGATTATGGCTCGCTTGTTGGATCACCTTTTTCATCAGTACAAGCTTCTCGTAACTCAGGATTCGACCGTGGGAGCGTGAATCGTAAACTTTGGAGTTATGAGAATGGTGGGGTTGATATATCCCTCAAGGATGGCTTGCCTTTGTTCTCAGAAGCTGCTCGTGAAACCGACGTTTCCGACACGATGTCTGTGCACTCTGGAAATCACAAATTTGGCCATAATGGTGAAGAATATGCTGATGATTTTACGGGGTTTTTTCAAATGAGTCCTCTTAAACGCAGACTCTCACGAAGTACTTCAACCAGCCCACTCCGGACTCGAAACAACATAGATGTCGAAAACACGATCTTCAACACTCCTCGGAAGCTTGTCCATTCCCTTCAGGATCGAAACGATGGGAGCTCTGACTATGCTAGCAAAAGTTGCAGACACAGACGAGGGAGTTTATCATCAGGCAATTTGGAGTGGAGTCCTCCAGATGATCAGAAACTCAGCAAAGACAGCTTAGACGACAACGGCGAGCAATCACACGGCGGCTCCGAATCAATCTCTTCAATTGATGGTGTCCCTGCCCATGGTGAAGTCCAAGCTGCTATACCTGTGGCAGTGGCTTGTCATAGTAAACTCAAACCTCAATGTACAGGCATTGAGATGGCATGTAAGAAAACTGGTTTGAAATTGGTCTGTGGCTTCTCAATTTTTCTTTTCACAATATTCACTTCATTGCTTTGGATTGATGATCGTGCCCAAGGCTCCTATCTTGTACCAACATAG

Protein sequence

MHLYAMKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPVFLAQVSENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQACSKVVPAIARYGIDPTTPDDKKRHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSDNWRFASDEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQILKCGVVEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYETLQTAKRISADKVSKMDKSPSSVTGSNFIDGRRSPWRNGGRRTPSSESPESRTLDSFFDYGSLVGSPFSSVQASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFSEAARETDVSDTMSVHSGNHKFGHNGEEYADDFTGFFQMSPLKRRLSRSTSTSPLRTRNNIDVENTIFNTPRKLVHSLQDRNDGSSDYASKSCRHRRGSLSSGNLEWSPPDDQKLSKDSLDDNGEQSHGGSESISSIDGVPAHGEVQAAIPVAVACHSKLKPQCTGIEMACKKTGLKLVCGFSIFLFTIFTSLLWIDDRAQGSYLVPT

Homology

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BLAST of CmoCh03G002590 vs. ExPASy Swiss-Prot
Match: Q5XVI1 (Protein SINE1 OS=Arabidopsis thaliana OX=3702 GN=SINE1 PE=1 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 7.3e-147
Identity = 311/487 (63.86%), Postives = 362/487 (74.33%), Query Frame = 0


Query: 17  MSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPVFLAQVSENKETGALTG 76
           M  NL+PILR+E ANLDKD ++R+SAMKALK+YVK+LDSKAIP FLAQV E KET +L+G
Sbjct: 1   MGLNLNPILRQELANLDKDTESRKSAMKALKSYVKDLDSKAIPGFLAQVFETKETNSLSG 60

Query: 77  ECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQACSKVVPAIARYGIDP 136
           E TISLYE+LARVHG NIVPQID IMS+I+KTLASSAGSFPLQQACSKV+PAIARYGIDP
Sbjct: 61  EYTISLYEILARVHGPNIVPQIDTIMSTIVKTLASSAGSFPLQQACSKVIPAIARYGIDP 120

Query: 137 TTPDDKKRHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSDNWRFASDEMVNKVCQN 196
           TT +DKKR +IHSLC PL++SLL SQESLT GAALCLKALVDSDNWRFASDEMVN+VCQN
Sbjct: 121 TTTEDKKRVIIHSLCKPLTDSLLASQESLTSGAALCLKALVDSDNWRFASDEMVNRVCQN 180

Query: 197 VAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQILKCGVVEKNSQKRLSA 256
           V  AL+  S QT+  MGLVM+LAK NP IVE YARLL+  GL+IL  GV E NSQKRLSA
Sbjct: 181 VVVALDSNSNQTHLQMGLVMSLAKHNPLIVEAYARLLIHTGLRILGFGVSEGNSQKRLSA 240

Query: 257 IQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYETLQTAKRISADKVSKM 316
           +QM+NFLMKCLDP SI+SE++ II+EME CQ DQMAYV+GAAYE + T+KRI+A+  SKM
Sbjct: 241 VQMLNFLMKCLDPRSIYSEVELIIKEMERCQSDQMAYVRGAAYEAMMTSKRIAAELESKM 300

Query: 317 DKSPSSVTGSNFIDGRRSPWRNGGRRTPS-SESPESRTLDSFFDYGSLV-GSPFSSVQAS 376
           +K   SVTGSNF        RN     P  S SPES+TL SF  Y S V  SP S    S
Sbjct: 301 EKGCRSVTGSNF------SRRNCSSIVPDYSLSPESQTLGSFSGYDSPVESSPIS--HTS 360

Query: 377 RNSGFDRGSVNRKLWSY-ENGG-VDISLKDGLPLFSEAAR-ETDVSDTMSVHSGNHKFGH 436
            NS FDR SVNRKLW   ENGG VDISLKDG  LFS   +  T VSD+  V        +
Sbjct: 361 CNSEFDRRSVNRKLWRRDENGGVVDISLKDG--LFSRVTKGSTTVSDSPLV-------PY 420

Query: 437 NGEEYADDFTGFFQMSPLKRRLSRSTSTSPLRTRN-NIDVEN-TIFNTPRKLVHSLQDRN 496
           +  E  D+F GF   S       R+T+ SP R R+  I+ E+  IF+TPRKL+ SLQ  +
Sbjct: 421 DTCENGDEFEGFLMES------LRNTTPSPQRQRSRRINAEDFNIFSTPRKLISSLQYPD 464

[Close]

BLAST of CmoCh03G002590 vs. ExPASy Swiss-Prot
Match: Q9SQR5 (Protein SINE2 OS=Arabidopsis thaliana OX=3702 GN=SINE2 PE=1 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 7.7e-88
Identity = 180/316 (56.96%), Postives = 232/316 (73.42%), Query Frame = 0


Query: 17  MSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPVFLAQVSENKETGALTG 76
           M +NL    R+E ANLDKD D+ ++AM  L++ VK+LD+K + VF+AQ+S+ KE G  +G
Sbjct: 1   MGRNLGSAFRQELANLDKDPDSHKTAMSNLRSIVKDLDAKVVHVFVAQLSDVKEIGLESG 60

Query: 77  ECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQACSKVVPAIARYGIDP 136
             T+SL+E LAR HGV I P ID IM +II+TL+SS GS  +QQACS+ V A+ARYGIDP
Sbjct: 61  GYTVSLFEDLARAHGVKIAPHIDIIMPAIIRTLSSSEGSLRVQQACSRAVAAMARYGIDP 120

Query: 137 TTPDDKKRHVIHSLCNPLSESLLGS--QESLTYGAALCLKALVDSDNWRFASDEMVNKVC 196
           TTP+DKK +VIHSLC PLS+SL+ S  Q+ L  G+ALCLK+LVD DNWR AS EMVN VC
Sbjct: 121 TTPEDKKTNVIHSLCKPLSDSLIDSQHQQHLALGSALCLKSLVDCDNWRSASSEMVNNVC 180

Query: 197 QNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQILKCGVVEKNSQKRL 256
           Q++A ALE  S++  SHM LVM L+K NP  VE YARL +++GL+IL  GVVE +SQKRL
Sbjct: 181 QSLAVALEATSSEAKSHMALVMALSKHNPFTVEAYARLFVKSGLRILDLGVVEGDSQKRL 240

Query: 257 SAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYETLQTAKRISADKVS 316
            AIQM+NFLMK L+P SI SEL+ I +EME  Q DQ  YVK AA+ET++ A+R+  +   
Sbjct: 241 LAIQMLNFLMKNLNPKSISSELELIYQEMEKYQKDQ-HYVKMAAHETMRQAERLICEADP 300

Query: 317 KMD----KSPSSVTGS 327
             D    K  +S++GS
Sbjct: 301 MFDAENCKPRNSLSGS 315

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BLAST of CmoCh03G002590 vs. ExPASy Swiss-Prot
Match: F4IK92 (TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=TOR1L2 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.8e-04
Identity = 72/330 (21.82%), Postives = 143/330 (43.33%), Query Frame = 0


Query: 6   MKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPVFLAQV 65
           MKA   TQ+         ++     N   D DT +  +  L+  V+ L    +  FL+ +
Sbjct: 14  MKANTNTQQVIFELKKKVVIA---LNKLADRDTYQRGVDELEKTVEHLAPDKVSCFLSCI 73

Query: 66  --SENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQACS 125
             +++++  A+  EC I L   LAR H   + P + +++SSI+K L        ++ AC 
Sbjct: 74  LDTDSEQKSAVRKEC-IRLMGTLARFHEGLVGPYLGKMVSSIVKRLKDP--DSVVRDACI 133

Query: 126 KVVPAIARYGIDPTTPDDKKRHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSDNWR 185
           + +  +A      +  +D+   V  SL  PL E++    + +  GAALCL  ++DS    
Sbjct: 134 ETMGVLAS---KMSCYEDQNFGVFVSLVKPLFEAIGDQNKYVQSGAALCLARVIDS---- 193

Query: 186 FASDEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIV---EPYARLLLQAGLQI 245
             S E    + Q +   +       NSH      + + N  I+      ++ +L + +  
Sbjct: 194 --SPEAPVAIIQRM--LMRTVKLLNNSHFIAKPAVIELNRSIILAGGATSKSVLSSAMSS 253

Query: 246 LKCGVVEKN-SQKRLSAIQMINFLM---KCLDPWSIFSELQAIIEEMENCQFDQMAYVKG 305
            +  +  K+ + ++ +++ ++       K L P        + I  +E+C+FD++  V+ 
Sbjct: 254 FQDALKNKDWTTRKAASVALMEIAATGEKFLGPLK-----ASCICSLESCRFDKVKPVRD 313

Query: 306 AAYETLQTAKRISADKVSKMDKSPSSVTGS 327
           +    L+  K +      +  ++ SSV  S
Sbjct: 314 SVILALKYWKGVPGSDSPEPSETESSVKES 321

[Close]

BLAST of CmoCh03G002590 vs. ExPASy Swiss-Prot
Match: Q93ZH1 (TORTIFOLIA1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=TOR1L4 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 2.4e-04
Identity = 74/330 (22.42%), Postives = 138/330 (41.82%), Query Frame = 0


Query: 8   ATPETQRSFMSKNLSPILR-REFANLDK--DADTRRSAMKALKTYVKELDSKAIPVFLAQ 67
           ++  T  S  S +  P L+ R  A L+K  D DT   A   L +  + L   +   FL  
Sbjct: 18  SSSSTSPSSQSPSTPPDLKQRVIACLNKLADRDTLALASAELDSIARNLTHDSFSPFLNC 77

Query: 68  V--SENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQAC 127
           +  +++     +  +C ++L  VL+R HG ++ P + +++S++I+ L     S  ++ AC
Sbjct: 78  IHNTDSSVKSPVRKQC-VALLSVLSRYHGDSLTPHLAKMVSTVIRRLRDPDSS--VRSAC 137

Query: 128 SKVVPAIARYGIDPTTPDDKKRHVIHSLCNPLSESLLGSQES-LTYGAALCLKALVDSDN 187
           +     ++ +           R    S+  PL E+L+   +S L  GAALCL A VD+  
Sbjct: 138 AVATADMSAH---------VTRQPFASVAKPLIETLIQEGDSNLQIGAALCLAASVDAAT 197

Query: 188 WRFASDEMVNKVCQNVAGALEEQSTQTN----SHMGLVMTLAKRNPRIVEPYARLLLQAG 247
                 E + K    +   L+    +      S +G ++T         +P    L+   
Sbjct: 198 --DPESEQLRKSLPKIGKLLKSDGFKAKAALLSAVGSIITAGGAG---TKPVLDWLVPVL 257

Query: 248 LQILKCGVVEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGA 307
           ++ L      ++   R SA + +  +    D  S +   +     +E+ +FD++  V+  
Sbjct: 258 IEFLS----SEDWAARKSAAEALGKVATAEDLASQYK--KTCTTALESRRFDKVKSVRET 317

Query: 308 AYETLQTAKRISADKVSKMDKSPSSVTGSN 328
               L   K +S D  + +  S SS    N
Sbjct: 318 MNRALNLWKEVSTDDEASLSPSRSSTDDGN 324

[Close]

BLAST of CmoCh03G002590 vs. ExPASy TrEMBL
Match: A0A6J1GDF9 (protein SINE1-like OS=Cucurbita moschata OX=3662 GN=LOC111452973 PE=4 SV=1)

HSP 1 Score: 1207.6 bits (3123), Expect = 0.0e+00
Identity = 615/615 (100.00%), Postives = 615/615 (100.00%), Query Frame = 0


Query: 1   MHLYAMKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPV 60
           MHLYAMKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPV
Sbjct: 1   MHLYAMKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPV 60

Query: 61  FLAQVSENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQ 120
           FLAQVSENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQ
Sbjct: 61  FLAQVSENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQ 120

Query: 121 ACSKVVPAIARYGIDPTTPDDKKRHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSD 180
           ACSKVVPAIARYGIDPTTPDDKKRHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSD
Sbjct: 121 ACSKVVPAIARYGIDPTTPDDKKRHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSD 180

Query: 181 NWRFASDEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQI 240
           NWRFASDEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQI
Sbjct: 181 NWRFASDEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQI 240

Query: 241 LKCGVVEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYE 300
           LKCGVVEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYE
Sbjct: 241 LKCGVVEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYE 300

Query: 301 TLQTAKRISADKVSKMDKSPSSVTGSNFIDGRRSPWRNGGRRTPSSESPESRTLDSFFDY 360
           TLQTAKRISADKVSKMDKSPSSVTGSNFIDGRRSPWRNGGRRTPSSESPESRTLDSFFDY
Sbjct: 301 TLQTAKRISADKVSKMDKSPSSVTGSNFIDGRRSPWRNGGRRTPSSESPESRTLDSFFDY 360

Query: 361 GSLVGSPFSSVQASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFSEAARETDVSDTM 420
           GSLVGSPFSSVQASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFSEAARETDVSDTM
Sbjct: 361 GSLVGSPFSSVQASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFSEAARETDVSDTM 420

Query: 421 SVHSGNHKFGHNGEEYADDFTGFFQMSPLKRRLSRSTSTSPLRTRNNIDVENTIFNTPRK 480
           SVHSGNHKFGHNGEEYADDFTGFFQMSPLKRRLSRSTSTSPLRTRNNIDVENTIFNTPRK
Sbjct: 421 SVHSGNHKFGHNGEEYADDFTGFFQMSPLKRRLSRSTSTSPLRTRNNIDVENTIFNTPRK 480

Query: 481 LVHSLQDRNDGSSDYASKSCRHRRGSLSSGNLEWSPPDDQKLSKDSLDDNGEQSHGGSES 540
           LVHSLQDRNDGSSDYASKSCRHRRGSLSSGNLEWSPPDDQKLSKDSLDDNGEQSHGGSES
Sbjct: 481 LVHSLQDRNDGSSDYASKSCRHRRGSLSSGNLEWSPPDDQKLSKDSLDDNGEQSHGGSES 540

Query: 541 ISSIDGVPAHGEVQAAIPVAVACHSKLKPQCTGIEMACKKTGLKLVCGFSIFLFTIFTSL 600
           ISSIDGVPAHGEVQAAIPVAVACHSKLKPQCTGIEMACKKTGLKLVCGFSIFLFTIFTSL
Sbjct: 541 ISSIDGVPAHGEVQAAIPVAVACHSKLKPQCTGIEMACKKTGLKLVCGFSIFLFTIFTSL 600

Query: 601 LWIDDRAQGSYLVPT 616
           LWIDDRAQGSYLVPT
Sbjct: 601 LWIDDRAQGSYLVPT 615

[Close]

BLAST of CmoCh03G002590 vs. ExPASy TrEMBL
Match: A0A6J1IS37 (protein SINE1-like OS=Cucurbita maxima OX=3661 GN=LOC111478192 PE=4 SV=1)

HSP 1 Score: 1156.4 bits (2990), Expect = 0.0e+00
Identity = 594/621 (95.65%), Postives = 605/621 (97.42%), Query Frame = 0


Query: 1   MHLYAMKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPV 60
           MHLYA+KATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPV
Sbjct: 1   MHLYAIKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPV 60

Query: 61  FLAQVSENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQ 120
           FLAQVS NKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQ
Sbjct: 61  FLAQVSANKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQ 120

Query: 121 ACSKVVPAIARYGIDPTTPDDKKRHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSD 180
           ACSKVVPAIARYGIDPTTPDDKK+HVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSD
Sbjct: 121 ACSKVVPAIARYGIDPTTPDDKKKHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSD 180

Query: 181 NWRFASDEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQI 240
           NWRFAS+EMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGL+I
Sbjct: 181 NWRFASNEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLRI 240

Query: 241 LKCGVVEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYE 300
           LKCGVVEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYE
Sbjct: 241 LKCGVVEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYE 300

Query: 301 TLQTAKRISADKVSKMDKSPSSVTGSNFIDGRRSPWRNGGRRTPSSESPESRTLDSFFDY 360
           TLQTAKRISADKVSKMDKSPSSVTGSNFIDGRRSPWRNGG RTPSSESPESRTLDSFFDY
Sbjct: 301 TLQTAKRISADKVSKMDKSPSSVTGSNFIDGRRSPWRNGGSRTPSSESPESRTLDSFFDY 360

Query: 361 GSLVGSPFSSVQASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFSEAARETDVSDTM 420
           GSLVGSPFSS+QASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFS+AAR  DVSDTM
Sbjct: 361 GSLVGSPFSSIQASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFSDAARGFDVSDTM 420

Query: 421 SVHSGNHKFGHNGEEYADDFTGFFQMSPLKRRLSRSTSTSPLRTRNNIDVENTIFNTPRK 480
           SVHSGNHKFGHNGEEYADDFTGFFQMSPLKRRLSRSTSTSP RTRNNIDVENTIFNTP+K
Sbjct: 421 SVHSGNHKFGHNGEEYADDFTGFFQMSPLKRRLSRSTSTSPFRTRNNIDVENTIFNTPQK 480

Query: 481 LVHSLQDRNDGSSDYASKSCRHRRGSLSSGNLEWSPPDDQKLSK----DSLDD--NGEQS 540
           L+HSLQDRNDGSSD ASKSCRHRR SLSSGNLEWS PDDQKLSK    DSLDD  NG+QS
Sbjct: 481 LIHSLQDRNDGSSDCASKSCRHRRRSLSSGNLEWSSPDDQKLSKDDAGDSLDDNNNGKQS 540

Query: 541 HGGSESISSIDGVPAHGEVQAAIPVAVACHSKLKPQCTGIEMACKKTGLKLVCGFSIFLF 600
           HGGSESISS DGVPAHG+VQAAIPVAVACHSKLKPQCTGIEMA KKTGLKLVCGFSIF+F
Sbjct: 541 HGGSESISSTDGVPAHGDVQAAIPVAVACHSKLKPQCTGIEMAYKKTGLKLVCGFSIFIF 600

Query: 601 TIFTSLLWIDDRAQGSYLVPT 616
           TIFTSLLWIDDRAQGSYLVPT
Sbjct: 601 TIFTSLLWIDDRAQGSYLVPT 621

[Close]

BLAST of CmoCh03G002590 vs. ExPASy TrEMBL
Match: A0A5A7UWA1 (ARM repeat superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00310 PE=4 SV=1)

HSP 1 Score: 1009.2 bits (2608), Expect = 7.3e-291
Identity = 534/625 (85.44%), Postives = 564/625 (90.24%), Query Frame = 0


Query: 6   MKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPVFLAQV 65
           MKA  ETQRSFMSKNLSP+LRREFANLDKDAD+RRSAMKAL+TYVKELDSKAIPVFLAQV
Sbjct: 1   MKAISETQRSFMSKNLSPMLRREFANLDKDADSRRSAMKALRTYVKELDSKAIPVFLAQV 60

Query: 66  SENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQACSKV 125
           SENKETGAL GECTISLYEVLARVHGVNIVPQIDRIM+SIIKTLASSAGSFPLQQACSKV
Sbjct: 61  SENKETGALNGECTISLYEVLARVHGVNIVPQIDRIMTSIIKTLASSAGSFPLQQACSKV 120

Query: 126 VPAIARYGIDPTTPDDKKRHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSDNWRFA 185
           VPAIARYGIDPTTPDDKK+HVI+SLCNPLSESLLGSQESLT GAALCLKALVDSDNWRFA
Sbjct: 121 VPAIARYGIDPTTPDDKKKHVIYSLCNPLSESLLGSQESLTAGAALCLKALVDSDNWRFA 180

Query: 186 SDEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQILKCGV 245
           SDEMVNKVCQNVAGALEE+STQTNSHMGLVM+LAKRNPRIVEPYARLLLQAGL+ILKCGV
Sbjct: 181 SDEMVNKVCQNVAGALEEKSTQTNSHMGLVMSLAKRNPRIVEPYARLLLQAGLRILKCGV 240

Query: 246 VEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYETLQTA 305
           VEKNSQKRLSAIQMINFLM+CLDPWSIFSELQ+IIEEMENCQ DQM YVKGAA+ETLQTA
Sbjct: 241 VEKNSQKRLSAIQMINFLMRCLDPWSIFSELQSIIEEMENCQSDQMPYVKGAAFETLQTA 300

Query: 306 KRISADKVSKMDKSPSSVTGSNFID-GRRSPWRNGGRRTPSSESPESRTLDSFFDYGSLV 365
           K+I ADK SKMDKSPSSVTGSNFID  RRSPWRNGG RTPSSESPES+TLDSFFDYGSLV
Sbjct: 301 KKILADKGSKMDKSPSSVTGSNFIDHRRRSPWRNGGSRTPSSESPESQTLDSFFDYGSLV 360

Query: 366 GSPFSSVQASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFSEAARETDVSDTMSVHS 425
           GSPFSS QASRNS FDR SVNRKLWSYENGGVDISLKDGL LFSE  R TDVSDTMS+HS
Sbjct: 361 GSPFSSRQASRNSAFDRRSVNRKLWSYENGGVDISLKDGLSLFSEVTRGTDVSDTMSLHS 420

Query: 426 GNHKFGHNGEEYADDFTGFFQMSPLKRRLSRSTSTSPLRTRNNIDVENTIFNTPRKLVHS 485
           G+HKFGHNGEEYADDF+GFFQMSP +RRLSRST+TSPLR+R+ I VE+ IF TPRKLVHS
Sbjct: 421 GSHKFGHNGEEYADDFSGFFQMSPPRRRLSRSTTTSPLRSRSYIKVEDMIFKTPRKLVHS 480

Query: 486 LQDRNDGSSDYASKSCRHRRGSLSSGNLEWSPP----------DDQKLSK---DSLD-DN 545
           LQD N+ +SDYAS S R R  SLSSGNLEWSPP          D++KLSK   D LD DN
Sbjct: 481 LQDLNETNSDYASGSSRRRHRSLSSGNLEWSPPRAFLNRNGSADERKLSKEDEDGLDIDN 540

Query: 546 GEQSHGGSESISSIDGVPAHGEVQAAIPVAVACHSKLKPQCTGIEMACKKTGLKLVCGFS 605
           GEQS G SESISS DGVP H +VQ A+PVAV C SK+KPQ  G+EMA KKT LKLVCGFS
Sbjct: 541 GEQSQGSSESISSTDGVPTHVDVQ-AMPVAVTCQSKIKPQYYGMEMAYKKTALKLVCGFS 600

Query: 606 IFLFTIFTSLLWIDDRAQGSYLVPT 616
             LFTIFTSLLWIDD  QGSYLVPT
Sbjct: 601 FLLFTIFTSLLWIDDHDQGSYLVPT 624

[Close]

BLAST of CmoCh03G002590 vs. ExPASy TrEMBL
Match: A0A1S3B5D3 (uncharacterized protein LOC103485976 OS=Cucumis melo OX=3656 GN=LOC103485976 PE=4 SV=1)

HSP 1 Score: 1009.2 bits (2608), Expect = 7.3e-291
Identity = 534/625 (85.44%), Postives = 564/625 (90.24%), Query Frame = 0


Query: 6   MKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPVFLAQV 65
           MKA  ETQRSFMSKNLSP+LRREFANLDKDAD+RRSAMKAL+TYVKELDSKAIPVFLAQV
Sbjct: 1   MKAISETQRSFMSKNLSPMLRREFANLDKDADSRRSAMKALRTYVKELDSKAIPVFLAQV 60

Query: 66  SENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQACSKV 125
           SENKETGAL GECTISLYEVLARVHGVNIVPQIDRIM+SIIKTLASSAGSFPLQQACSKV
Sbjct: 61  SENKETGALNGECTISLYEVLARVHGVNIVPQIDRIMTSIIKTLASSAGSFPLQQACSKV 120

Query: 126 VPAIARYGIDPTTPDDKKRHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSDNWRFA 185
           VPAIARYGIDPTTPDDKK+HVI+SLCNPLSESLLGSQESLT GAALCLKALVDSDNWRFA
Sbjct: 121 VPAIARYGIDPTTPDDKKKHVIYSLCNPLSESLLGSQESLTAGAALCLKALVDSDNWRFA 180

Query: 186 SDEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQILKCGV 245
           SDEMVNKVCQNVAGALEE+STQTNSHMGLVM+LAKRNPRIVEPYARLLLQAGL+ILKCGV
Sbjct: 181 SDEMVNKVCQNVAGALEEKSTQTNSHMGLVMSLAKRNPRIVEPYARLLLQAGLRILKCGV 240

Query: 246 VEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYETLQTA 305
           VEKNSQKRLSAIQMINFLM+CLDPWSIFSELQ+IIEEMENCQ DQM YVKGAA+ETLQTA
Sbjct: 241 VEKNSQKRLSAIQMINFLMRCLDPWSIFSELQSIIEEMENCQSDQMPYVKGAAFETLQTA 300

Query: 306 KRISADKVSKMDKSPSSVTGSNFID-GRRSPWRNGGRRTPSSESPESRTLDSFFDYGSLV 365
           K+I ADK SKMDKSPSSVTGSNFID  RRSPWRNGG RTPSSESPES+TLDSFFDYGSLV
Sbjct: 301 KKILADKGSKMDKSPSSVTGSNFIDHRRRSPWRNGGSRTPSSESPESQTLDSFFDYGSLV 360

Query: 366 GSPFSSVQASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFSEAARETDVSDTMSVHS 425
           GSPFSS QASRNS FDR SVNRKLWSYENGGVDISLKDGL LFSE  R TDVSDTMS+HS
Sbjct: 361 GSPFSSRQASRNSAFDRRSVNRKLWSYENGGVDISLKDGLSLFSEVTRGTDVSDTMSLHS 420

Query: 426 GNHKFGHNGEEYADDFTGFFQMSPLKRRLSRSTSTSPLRTRNNIDVENTIFNTPRKLVHS 485
           G+HKFGHNGEEYADDF+GFFQMSP +RRLSRST+TSPLR+R+ I VE+ IF TPRKLVHS
Sbjct: 421 GSHKFGHNGEEYADDFSGFFQMSPPRRRLSRSTTTSPLRSRSYIKVEDMIFKTPRKLVHS 480

Query: 486 LQDRNDGSSDYASKSCRHRRGSLSSGNLEWSPP----------DDQKLSK---DSLD-DN 545
           LQD N+ +SDYAS S R R  SLSSGNLEWSPP          D++KLSK   D LD DN
Sbjct: 481 LQDLNETNSDYASGSSRRRHRSLSSGNLEWSPPRAFLNRNGSADERKLSKEDEDGLDIDN 540

Query: 546 GEQSHGGSESISSIDGVPAHGEVQAAIPVAVACHSKLKPQCTGIEMACKKTGLKLVCGFS 605
           GEQS G SESISS DGVP H +VQ A+PVAV C SK+KPQ  G+EMA KKT LKLVCGFS
Sbjct: 541 GEQSQGSSESISSTDGVPTHVDVQ-AMPVAVTCQSKIKPQYYGMEMAYKKTALKLVCGFS 600

Query: 606 IFLFTIFTSLLWIDDRAQGSYLVPT 616
             LFTIFTSLLWIDD  QGSYLVPT
Sbjct: 601 FLLFTIFTSLLWIDDHDQGSYLVPT 624

[Close]

BLAST of CmoCh03G002590 vs. ExPASy TrEMBL
Match: A0A0A0KYP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192160 PE=4 SV=1)

HSP 1 Score: 1008.8 bits (2607), Expect = 9.5e-291
Identity = 533/625 (85.28%), Postives = 562/625 (89.92%), Query Frame = 0


Query: 6   MKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPVFLAQV 65
           MKA  ETQRSFMSKNLSP+LRREFANLDKDAD+RRSAMKALKTYVKELDSKAIPVFLAQV
Sbjct: 1   MKAISETQRSFMSKNLSPMLRREFANLDKDADSRRSAMKALKTYVKELDSKAIPVFLAQV 60

Query: 66  SENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQACSKV 125
           SENKETGAL GECTISLYEVLARVHGVNIVPQIDRIM+SIIKTLASSAGSFPLQQACSKV
Sbjct: 61  SENKETGALNGECTISLYEVLARVHGVNIVPQIDRIMTSIIKTLASSAGSFPLQQACSKV 120

Query: 126 VPAIARYGIDPTTPDDKKRHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSDNWRFA 185
           VPAIARYGIDPTTPDDKK+HVI+SLCNPLSESLLGSQESLT GAALCLKALVDSDNWRFA
Sbjct: 121 VPAIARYGIDPTTPDDKKKHVIYSLCNPLSESLLGSQESLTAGAALCLKALVDSDNWRFA 180

Query: 186 SDEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQILKCGV 245
           SDEMVNKVCQNVAGALEE+STQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGL+ILKCGV
Sbjct: 181 SDEMVNKVCQNVAGALEEKSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLRILKCGV 240

Query: 246 VEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYETLQTA 305
           VEKNSQKRLSAIQMINFLM+CLDPWSIFSELQ+IIEEMENCQ DQM YVKGAA+ETLQTA
Sbjct: 241 VEKNSQKRLSAIQMINFLMRCLDPWSIFSELQSIIEEMENCQSDQMPYVKGAAFETLQTA 300

Query: 306 KRISADKVSKMDKSPSSVTGSNFID-GRRSPWRNGGRRTPSSESPESRTLDSFFDYGSLV 365
           K+I ADK SKMDKSPSSVTGSNF+D  RRSPWRNGG RTPSSESPES+TLDSFFDYGSLV
Sbjct: 301 KKILADKGSKMDKSPSSVTGSNFLDHRRRSPWRNGGSRTPSSESPESQTLDSFFDYGSLV 360

Query: 366 GSPFSSVQASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFSEAARETDVSDTMSVHS 425
           GSPFSS QASRNSGFDR SVNRKLWSYENGGVDISLKDGL LFSE  R TDVSDTMS++S
Sbjct: 361 GSPFSSRQASRNSGFDRRSVNRKLWSYENGGVDISLKDGLSLFSEVTRGTDVSDTMSMYS 420

Query: 426 GNHKFGHNGEEYADDFTGFFQMSPLKRRLSRSTSTSPLRTRNNIDVENTIFNTPRKLVHS 485
           G+HKFGHNGEEYADDF+GFFQMSP +RRLSRST+TSPLR+R+ I+VE+ IF TPRKLVHS
Sbjct: 421 GSHKFGHNGEEYADDFSGFFQMSPPRRRLSRSTTTSPLRSRSYINVEDMIFKTPRKLVHS 480

Query: 486 LQDRNDGSSDYASKSCRHRRGSLSSGNLEWSPP----------DDQKLSKDSLD----DN 545
           LQD N+G SDYAS S R R  SLSSGNLEWSPP          D+ KLSK+  D     N
Sbjct: 481 LQDLNEGKSDYASGSSRCRHRSLSSGNLEWSPPRAFLNQNGFADEPKLSKEDEDGLGNGN 540

Query: 546 GEQSHGGSESISSIDGVPAHGEVQAAIPVAVACHSKLKPQCTGIEMACKKTGLKLVCGFS 605
           GEQS G  ESISS DG P H +VQ AIPVAVAC SK+KPQ  G+EMA KKT LKLVCGFS
Sbjct: 541 GEQSQGSYESISSADGAPTHVDVQ-AIPVAVACQSKMKPQYYGMEMAYKKTALKLVCGFS 600

Query: 606 IFLFTIFTSLLWIDDRAQGSYLVPT 616
             LFTIFTSLLWIDD  QGSYLVPT
Sbjct: 601 FLLFTIFTSLLWIDDHDQGSYLVPT 624

[Close]

BLAST of CmoCh03G002590 vs. NCBI nr
Match: XP_022949649.1 (protein SINE1-like [Cucurbita moschata])

HSP 1 Score: 1207.6 bits (3123), Expect = 0.0e+00
Identity = 615/615 (100.00%), Postives = 615/615 (100.00%), Query Frame = 0


Query: 1   MHLYAMKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPV 60
           MHLYAMKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPV
Sbjct: 1   MHLYAMKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPV 60

Query: 61  FLAQVSENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQ 120
           FLAQVSENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQ
Sbjct: 61  FLAQVSENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQ 120

Query: 121 ACSKVVPAIARYGIDPTTPDDKKRHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSD 180
           ACSKVVPAIARYGIDPTTPDDKKRHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSD
Sbjct: 121 ACSKVVPAIARYGIDPTTPDDKKRHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSD 180

Query: 181 NWRFASDEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQI 240
           NWRFASDEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQI
Sbjct: 181 NWRFASDEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQI 240

Query: 241 LKCGVVEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYE 300
           LKCGVVEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYE
Sbjct: 241 LKCGVVEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYE 300

Query: 301 TLQTAKRISADKVSKMDKSPSSVTGSNFIDGRRSPWRNGGRRTPSSESPESRTLDSFFDY 360
           TLQTAKRISADKVSKMDKSPSSVTGSNFIDGRRSPWRNGGRRTPSSESPESRTLDSFFDY
Sbjct: 301 TLQTAKRISADKVSKMDKSPSSVTGSNFIDGRRSPWRNGGRRTPSSESPESRTLDSFFDY 360

Query: 361 GSLVGSPFSSVQASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFSEAARETDVSDTM 420
           GSLVGSPFSSVQASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFSEAARETDVSDTM
Sbjct: 361 GSLVGSPFSSVQASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFSEAARETDVSDTM 420

Query: 421 SVHSGNHKFGHNGEEYADDFTGFFQMSPLKRRLSRSTSTSPLRTRNNIDVENTIFNTPRK 480
           SVHSGNHKFGHNGEEYADDFTGFFQMSPLKRRLSRSTSTSPLRTRNNIDVENTIFNTPRK
Sbjct: 421 SVHSGNHKFGHNGEEYADDFTGFFQMSPLKRRLSRSTSTSPLRTRNNIDVENTIFNTPRK 480

Query: 481 LVHSLQDRNDGSSDYASKSCRHRRGSLSSGNLEWSPPDDQKLSKDSLDDNGEQSHGGSES 540
           LVHSLQDRNDGSSDYASKSCRHRRGSLSSGNLEWSPPDDQKLSKDSLDDNGEQSHGGSES
Sbjct: 481 LVHSLQDRNDGSSDYASKSCRHRRGSLSSGNLEWSPPDDQKLSKDSLDDNGEQSHGGSES 540

Query: 541 ISSIDGVPAHGEVQAAIPVAVACHSKLKPQCTGIEMACKKTGLKLVCGFSIFLFTIFTSL 600
           ISSIDGVPAHGEVQAAIPVAVACHSKLKPQCTGIEMACKKTGLKLVCGFSIFLFTIFTSL
Sbjct: 541 ISSIDGVPAHGEVQAAIPVAVACHSKLKPQCTGIEMACKKTGLKLVCGFSIFLFTIFTSL 600

Query: 601 LWIDDRAQGSYLVPT 616
           LWIDDRAQGSYLVPT
Sbjct: 601 LWIDDRAQGSYLVPT 615

[Close]

BLAST of CmoCh03G002590 vs. NCBI nr
Match: KAG6603492.1 (Protein SINE1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1182.5 bits (3058), Expect = 0.0e+00
Identity = 605/617 (98.06%), Postives = 611/617 (99.03%), Query Frame = 0


Query: 1   MHLYAMKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPV 60
           MHLYAMKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPV
Sbjct: 1   MHLYAMKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPV 60

Query: 61  FLAQVSENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQ 120
           FLAQVSENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQ
Sbjct: 61  FLAQVSENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQ 120

Query: 121 ACSKVVPAIARYGIDPTTPDDKKRHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSD 180
           ACSKVVPAIARYGIDPTTPDDKK+HVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSD
Sbjct: 121 ACSKVVPAIARYGIDPTTPDDKKKHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSD 180

Query: 181 NWRFASDEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQI 240
           NWRFASDEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGL+I
Sbjct: 181 NWRFASDEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLRI 240

Query: 241 LKCGVVEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYE 300
           LKCGVVEKNSQKRLSAIQMINFLMKCLDPWSI+SELQAIIEEMENCQFDQMAYVKGAAYE
Sbjct: 241 LKCGVVEKNSQKRLSAIQMINFLMKCLDPWSIYSELQAIIEEMENCQFDQMAYVKGAAYE 300

Query: 301 TLQTAKRISADKVSKMDKSPSSVTGSNFIDGRRSPWRNGGRRTPSSESPESRTLDSFFDY 360
           TLQTAKRISADKVSKMDKSPSSVTGSNFIDGRRSPWRNGG RTPSSESPESRTLDSFFDY
Sbjct: 301 TLQTAKRISADKVSKMDKSPSSVTGSNFIDGRRSPWRNGGSRTPSSESPESRTLDSFFDY 360

Query: 361 GSLVGSPFSSVQASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFSEAARETDVSDTM 420
           GSLVGSPFSSVQASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFSEAARETDVSDTM
Sbjct: 361 GSLVGSPFSSVQASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFSEAARETDVSDTM 420

Query: 421 SVHSGNHKFGHNGEEYADDFTGFFQMSPLKRRLSRSTSTSPLRTRNNIDVENTIFNTPRK 480
           SV SGNHKFGH+GEEYADDFTGFFQMSPLKRRLSRSTSTSPLRT +NIDVENTIFNTPRK
Sbjct: 421 SVQSGNHKFGHHGEEYADDFTGFFQMSPLKRRLSRSTSTSPLRTPHNIDVENTIFNTPRK 480

Query: 481 LVHSLQDRNDGSSDYASKSCRHRRGSLSSGNLEWSPPDDQKLSKDSLD--DNGEQSHGGS 540
           LVHSLQDRNDGSSDYASKSCRHRR SLSSGNLEWSPPDDQKLSKDSLD  DNGEQSHGGS
Sbjct: 481 LVHSLQDRNDGSSDYASKSCRHRRRSLSSGNLEWSPPDDQKLSKDSLDDNDNGEQSHGGS 540

Query: 541 ESISSIDGVPAHGEVQAAIPVAVACHSKLKPQCTGIEMACKKTGLKLVCGFSIFLFTIFT 600
           ESISSIDGVPAHG+VQAAIPVAVACHSKLKPQCTGIEMACKKTGLKLVCGFSIFLFTIFT
Sbjct: 541 ESISSIDGVPAHGDVQAAIPVAVACHSKLKPQCTGIEMACKKTGLKLVCGFSIFLFTIFT 600

Query: 601 SLLWIDDRAQGSYLVPT 616
           SLLWIDDRAQGSYLVPT
Sbjct: 601 SLLWIDDRAQGSYLVPT 617

[Close]

BLAST of CmoCh03G002590 vs. NCBI nr
Match: XP_023543378.1 (protein SINE1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1161.7 bits (3004), Expect = 0.0e+00
Identity = 600/621 (96.62%), Postives = 605/621 (97.42%), Query Frame = 0


Query: 1   MHLYAMKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPV 60
           MHLYAMKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPV
Sbjct: 1   MHLYAMKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPV 60

Query: 61  FLAQVSENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQ 120
           FLAQVSENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQ
Sbjct: 61  FLAQVSENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQ 120

Query: 121 ACSKVVPAIARYGIDPTTPDDKKRHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSD 180
           ACSKVVPAIARYGIDPTTPDDKK+HVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSD
Sbjct: 121 ACSKVVPAIARYGIDPTTPDDKKKHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSD 180

Query: 181 NWRFASDEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQI 240
           NWRFASDEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGL+I
Sbjct: 181 NWRFASDEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLRI 240

Query: 241 LKCGVVEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYE 300
           LKCGVVEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYE
Sbjct: 241 LKCGVVEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYE 300

Query: 301 TLQTAKRISADKVSKMDKSPSSVTGSNFIDGRRSPWRNGGRRTPSSESPESRTLDSFFDY 360
           TLQTAKRISADKVSKMDKSPSSVTGSNFIDGRRSPWRNGG RTPSSESPESRTLDSFFDY
Sbjct: 301 TLQTAKRISADKVSKMDKSPSSVTGSNFIDGRRSPWRNGGSRTPSSESPESRTLDSFFDY 360

Query: 361 GSLVGSPFSSVQASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFSEAARETDVSDTM 420
           GSLVGSPFSSVQ SRNS FDRGSVNRKLWSYENGGVDISLKDGLPLFSEAAR TDVSDTM
Sbjct: 361 GSLVGSPFSSVQTSRNSRFDRGSVNRKLWSYENGGVDISLKDGLPLFSEAARGTDVSDTM 420

Query: 421 SVHSGNHKFGHNGEEYADDFTGFFQMSPLKRRLSRSTSTSPLRTRNNIDVENTIFNTPRK 480
           SVHSGNHKFGHNGEEYADDFTGFFQMSPLKR LSRSTSTSPLRT +NIDVENTIFNTPRK
Sbjct: 421 SVHSGNHKFGHNGEEYADDFTGFFQMSPLKRSLSRSTSTSPLRTPHNIDVENTIFNTPRK 480

Query: 481 LVHSLQDRNDGSSDYASKSCRHRRGSLSSGNLEWSPPDDQKLSK----DSLD--DNGEQS 540
           LVHSLQDRNDGSSDYASKSCRHRR SLSSGNLEWSPPDDQKLSK    DSLD  DNGEQS
Sbjct: 481 LVHSLQDRNDGSSDYASKSCRHRRRSLSSGNLEWSPPDDQKLSKDDAGDSLDNNDNGEQS 540

Query: 541 HGGSESISSIDGVPAHGEVQAAIPVAVACHSKLKPQCTGIEMACKKTGLKLVCGFSIFLF 600
           HGGSESISS DGVPAHG+VQAAIPVAVA HSKLKPQCTGI+MA KKTGLKLVCGFSIFLF
Sbjct: 541 HGGSESISSTDGVPAHGDVQAAIPVAVAYHSKLKPQCTGIQMAYKKTGLKLVCGFSIFLF 600

Query: 601 TIFTSLLWIDDRAQGSYLVPT 616
           TIFTSLLWIDDRAQGSYLVPT
Sbjct: 601 TIFTSLLWIDDRAQGSYLVPT 621

[Close]

BLAST of CmoCh03G002590 vs. NCBI nr
Match: XP_022978118.1 (protein SINE1-like [Cucurbita maxima])

HSP 1 Score: 1156.4 bits (2990), Expect = 0.0e+00
Identity = 594/621 (95.65%), Postives = 605/621 (97.42%), Query Frame = 0


Query: 1   MHLYAMKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPV 60
           MHLYA+KATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPV
Sbjct: 1   MHLYAIKATPETQRSFMSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPV 60

Query: 61  FLAQVSENKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQ 120
           FLAQVS NKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQ
Sbjct: 61  FLAQVSANKETGALTGECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQ 120

Query: 121 ACSKVVPAIARYGIDPTTPDDKKRHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSD 180
           ACSKVVPAIARYGIDPTTPDDKK+HVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSD
Sbjct: 121 ACSKVVPAIARYGIDPTTPDDKKKHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSD 180

Query: 181 NWRFASDEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQI 240
           NWRFAS+EMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGL+I
Sbjct: 181 NWRFASNEMVNKVCQNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLRI 240

Query: 241 LKCGVVEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYE 300
           LKCGVVEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYE
Sbjct: 241 LKCGVVEKNSQKRLSAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYE 300

Query: 301 TLQTAKRISADKVSKMDKSPSSVTGSNFIDGRRSPWRNGGRRTPSSESPESRTLDSFFDY 360
           TLQTAKRISADKVSKMDKSPSSVTGSNFIDGRRSPWRNGG RTPSSESPESRTLDSFFDY
Sbjct: 301 TLQTAKRISADKVSKMDKSPSSVTGSNFIDGRRSPWRNGGSRTPSSESPESRTLDSFFDY 360

Query: 361 GSLVGSPFSSVQASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFSEAARETDVSDTM 420
           GSLVGSPFSS+QASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFS+AAR  DVSDTM
Sbjct: 361 GSLVGSPFSSIQASRNSGFDRGSVNRKLWSYENGGVDISLKDGLPLFSDAARGFDVSDTM 420

Query: 421 SVHSGNHKFGHNGEEYADDFTGFFQMSPLKRRLSRSTSTSPLRTRNNIDVENTIFNTPRK 480
           SVHSGNHKFGHNGEEYADDFTGFFQMSPLKRRLSRSTSTSP RTRNNIDVENTIFNTP+K
Sbjct: 421 SVHSGNHKFGHNGEEYADDFTGFFQMSPLKRRLSRSTSTSPFRTRNNIDVENTIFNTPQK 480

Query: 481 LVHSLQDRNDGSSDYASKSCRHRRGSLSSGNLEWSPPDDQKLSK----DSLDD--NGEQS 540
           L+HSLQDRNDGSSD ASKSCRHRR SLSSGNLEWS PDDQKLSK    DSLDD  NG+QS
Sbjct: 481 LIHSLQDRNDGSSDCASKSCRHRRRSLSSGNLEWSSPDDQKLSKDDAGDSLDDNNNGKQS 540

Query: 541 HGGSESISSIDGVPAHGEVQAAIPVAVACHSKLKPQCTGIEMACKKTGLKLVCGFSIFLF 600
           HGGSESISS DGVPAHG+VQAAIPVAVACHSKLKPQCTGIEMA KKTGLKLVCGFSIF+F
Sbjct: 541 HGGSESISSTDGVPAHGDVQAAIPVAVACHSKLKPQCTGIEMAYKKTGLKLVCGFSIFIF 600

Query: 601 TIFTSLLWIDDRAQGSYLVPT 616
           TIFTSLLWIDDRAQGSYLVPT
Sbjct: 601 TIFTSLLWIDDRAQGSYLVPT 621

[Close]

BLAST of CmoCh03G002590 vs. NCBI nr
Match: XP_023522166.1 (protein SINE1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1129.4 bits (2920), Expect = 0.0e+00
Identity = 584/605 (96.53%), Postives = 589/605 (97.36%), Query Frame = 0


Query: 17  MSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPVFLAQVSENKETGALTG 76
           MSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPVFLAQVSENKETGALTG
Sbjct: 1   MSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPVFLAQVSENKETGALTG 60

Query: 77  ECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQACSKVVPAIARYGIDP 136
           ECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQACSKVVPAIARYGIDP
Sbjct: 61  ECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQACSKVVPAIARYGIDP 120

Query: 137 TTPDDKKRHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSDNWRFASDEMVNKVCQN 196
           TTPDDKK+HVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSDNWRFASDEMVNKVCQN
Sbjct: 121 TTPDDKKKHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSDNWRFASDEMVNKVCQN 180

Query: 197 VAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQILKCGVVEKNSQKRLSA 256
           VAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGL+ILKCGVVEKNSQKRLSA
Sbjct: 181 VAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLRILKCGVVEKNSQKRLSA 240

Query: 257 IQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYETLQTAKRISADKVSKM 316
           IQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYETLQTAKRISADKVSKM
Sbjct: 241 IQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYETLQTAKRISADKVSKM 300

Query: 317 DKSPSSVTGSNFIDGRRSPWRNGGRRTPSSESPESRTLDSFFDYGSLVGSPFSSVQASRN 376
           DKSPSSVTGSNFIDGRRSPWRNGG RTPSSESPESRTLDSFFDYGSLVGSPFSSVQ SRN
Sbjct: 301 DKSPSSVTGSNFIDGRRSPWRNGGSRTPSSESPESRTLDSFFDYGSLVGSPFSSVQTSRN 360

Query: 377 SGFDRGSVNRKLWSYENGGVDISLKDGLPLFSEAARETDVSDTMSVHSGNHKFGHNGEEY 436
           S FDRGSVNRKLWSYENGGVDISLKDGLPLFSEAAR TDVSDTMSVHSGNHKFGHNGEEY
Sbjct: 361 SRFDRGSVNRKLWSYENGGVDISLKDGLPLFSEAARGTDVSDTMSVHSGNHKFGHNGEEY 420

Query: 437 ADDFTGFFQMSPLKRRLSRSTSTSPLRTRNNIDVENTIFNTPRKLVHSLQDRNDGSSDYA 496
           ADDFTGFFQMSPLKR LSRSTSTSPLRT +NIDVENTIFNTPRKLVHSLQDRNDGSSDYA
Sbjct: 421 ADDFTGFFQMSPLKRSLSRSTSTSPLRTPHNIDVENTIFNTPRKLVHSLQDRNDGSSDYA 480

Query: 497 SKSCRHRRGSLSSGNLEWSPPDDQKLSK----DSLD--DNGEQSHGGSESISSIDGVPAH 556
           SKSCRHRR SLSSGNLEWSPPDDQKLSK    DSLD  DNGEQSHGGSESISS DGVPAH
Sbjct: 481 SKSCRHRRRSLSSGNLEWSPPDDQKLSKDDAGDSLDNNDNGEQSHGGSESISSTDGVPAH 540

Query: 557 GEVQAAIPVAVACHSKLKPQCTGIEMACKKTGLKLVCGFSIFLFTIFTSLLWIDDRAQGS 616
           G+VQAAIPVAVA HSKLKPQCTGI+MA KKTGLKLVCGFSIFLFTIFTSLLWIDDRAQGS
Sbjct: 541 GDVQAAIPVAVAYHSKLKPQCTGIQMAYKKTGLKLVCGFSIFLFTIFTSLLWIDDRAQGS 600

[Close]

BLAST of CmoCh03G002590 vs. TAIR 10
Match: AT1G54385.1 (ARM repeat superfamily protein )

HSP 1 Score: 522.3 bits (1344), Expect = 5.2e-148
Identity = 311/487 (63.86%), Postives = 362/487 (74.33%), Query Frame = 0


Query: 17  MSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPVFLAQVSENKETGALTG 76
           M  NL+PILR+E ANLDKD ++R+SAMKALK+YVK+LDSKAIP FLAQV E KET +L+G
Sbjct: 1   MGLNLNPILRQELANLDKDTESRKSAMKALKSYVKDLDSKAIPGFLAQVFETKETNSLSG 60

Query: 77  ECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQACSKVVPAIARYGIDP 136
           E TISLYE+LARVHG NIVPQID IMS+I+KTLASSAGSFPLQQACSKV+PAIARYGIDP
Sbjct: 61  EYTISLYEILARVHGPNIVPQIDTIMSTIVKTLASSAGSFPLQQACSKVIPAIARYGIDP 120

Query: 137 TTPDDKKRHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSDNWRFASDEMVNKVCQN 196
           TT +DKKR +IHSLC PL++SLL SQESLT GAALCLKALVDSDNWRFASDEMVN+VCQN
Sbjct: 121 TTTEDKKRVIIHSLCKPLTDSLLASQESLTSGAALCLKALVDSDNWRFASDEMVNRVCQN 180

Query: 197 VAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQILKCGVVEKNSQKRLSA 256
           V  AL+  S QT+  MGLVM+LAK NP IVE YARLL+  GL+IL  GV E NSQKRLSA
Sbjct: 181 VVVALDSNSNQTHLQMGLVMSLAKHNPLIVEAYARLLIHTGLRILGFGVSEGNSQKRLSA 240

Query: 257 IQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYETLQTAKRISADKVSKM 316
           +QM+NFLMKCLDP SI+SE++ II+EME CQ DQMAYV+GAAYE + T+KRI+A+  SKM
Sbjct: 241 VQMLNFLMKCLDPRSIYSEVELIIKEMERCQSDQMAYVRGAAYEAMMTSKRIAAELESKM 300

Query: 317 DKSPSSVTGSNFIDGRRSPWRNGGRRTPS-SESPESRTLDSFFDYGSLV-GSPFSSVQAS 376
           +K   SVTGSNF        RN     P  S SPES+TL SF  Y S V  SP S    S
Sbjct: 301 EKGCRSVTGSNF------SRRNCSSIVPDYSLSPESQTLGSFSGYDSPVESSPIS--HTS 360

Query: 377 RNSGFDRGSVNRKLWSY-ENGG-VDISLKDGLPLFSEAAR-ETDVSDTMSVHSGNHKFGH 436
            NS FDR SVNRKLW   ENGG VDISLKDG  LFS   +  T VSD+  V        +
Sbjct: 361 CNSEFDRRSVNRKLWRRDENGGVVDISLKDG--LFSRVTKGSTTVSDSPLV-------PY 420

Query: 437 NGEEYADDFTGFFQMSPLKRRLSRSTSTSPLRTRN-NIDVEN-TIFNTPRKLVHSLQDRN 496
           +  E  D+F GF   S       R+T+ SP R R+  I+ E+  IF+TPRKL+ SLQ  +
Sbjct: 421 DTCENGDEFEGFLMES------LRNTTPSPQRQRSRRINAEDFNIFSTPRKLISSLQYPD 464

[Close]

BLAST of CmoCh03G002590 vs. TAIR 10
Match: AT1G54385.2 (ARM repeat superfamily protein )

HSP 1 Score: 522.3 bits (1344), Expect = 5.2e-148
Identity = 311/487 (63.86%), Postives = 362/487 (74.33%), Query Frame = 0


Query: 17  MSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPVFLAQVSENKETGALTG 76
           M  NL+PILR+E ANLDKD ++R+SAMKALK+YVK+LDSKAIP FLAQV E KET +L+G
Sbjct: 1   MGLNLNPILRQELANLDKDTESRKSAMKALKSYVKDLDSKAIPGFLAQVFETKETNSLSG 60

Query: 77  ECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQACSKVVPAIARYGIDP 136
           E TISLYE+LARVHG NIVPQID IMS+I+KTLASSAGSFPLQQACSKV+PAIARYGIDP
Sbjct: 61  EYTISLYEILARVHGPNIVPQIDTIMSTIVKTLASSAGSFPLQQACSKVIPAIARYGIDP 120

Query: 137 TTPDDKKRHVIHSLCNPLSESLLGSQESLTYGAALCLKALVDSDNWRFASDEMVNKVCQN 196
           TT +DKKR +IHSLC PL++SLL SQESLT GAALCLKALVDSDNWRFASDEMVN+VCQN
Sbjct: 121 TTTEDKKRVIIHSLCKPLTDSLLASQESLTSGAALCLKALVDSDNWRFASDEMVNRVCQN 180

Query: 197 VAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQILKCGVVEKNSQKRLSA 256
           V  AL+  S QT+  MGLVM+LAK NP IVE YARLL+  GL+IL  GV E NSQKRLSA
Sbjct: 181 VVVALDSNSNQTHLQMGLVMSLAKHNPLIVEAYARLLIHTGLRILGFGVSEGNSQKRLSA 240

Query: 257 IQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYETLQTAKRISADKVSKM 316
           +QM+NFLMKCLDP SI+SE++ II+EME CQ DQMAYV+GAAYE + T+KRI+A+  SKM
Sbjct: 241 VQMLNFLMKCLDPRSIYSEVELIIKEMERCQSDQMAYVRGAAYEAMMTSKRIAAELESKM 300

Query: 317 DKSPSSVTGSNFIDGRRSPWRNGGRRTPS-SESPESRTLDSFFDYGSLV-GSPFSSVQAS 376
           +K   SVTGSNF        RN     P  S SPES+TL SF  Y S V  SP S    S
Sbjct: 301 EKGCRSVTGSNF------SRRNCSSIVPDYSLSPESQTLGSFSGYDSPVESSPIS--HTS 360

Query: 377 RNSGFDRGSVNRKLWSY-ENGG-VDISLKDGLPLFSEAAR-ETDVSDTMSVHSGNHKFGH 436
            NS FDR SVNRKLW   ENGG VDISLKDG  LFS   +  T VSD+  V        +
Sbjct: 361 CNSEFDRRSVNRKLWRRDENGGVVDISLKDG--LFSRVTKGSTTVSDSPLV-------PY 420

Query: 437 NGEEYADDFTGFFQMSPLKRRLSRSTSTSPLRTRN-NIDVEN-TIFNTPRKLVHSLQDRN 496
           +  E  D+F GF   S       R+T+ SP R R+  I+ E+  IF+TPRKL+ SLQ  +
Sbjct: 421 DTCENGDEFEGFLMES------LRNTTPSPQRQRSRRINAEDFNIFSTPRKLISSLQYPD 464

[Close]

BLAST of CmoCh03G002590 vs. TAIR 10
Match: AT3G03970.1 (ARM repeat superfamily protein )

HSP 1 Score: 326.2 bits (835), Expect = 5.5e-89
Identity = 180/316 (56.96%), Postives = 232/316 (73.42%), Query Frame = 0


Query: 17  MSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPVFLAQVSENKETGALTG 76
           M +NL    R+E ANLDKD D+ ++AM  L++ VK+LD+K + VF+AQ+S+ KE G  +G
Sbjct: 1   MGRNLGSAFRQELANLDKDPDSHKTAMSNLRSIVKDLDAKVVHVFVAQLSDVKEIGLESG 60

Query: 77  ECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQACSKVVPAIARYGIDP 136
             T+SL+E LAR HGV I P ID IM +II+TL+SS GS  +QQACS+ V A+ARYGIDP
Sbjct: 61  GYTVSLFEDLARAHGVKIAPHIDIIMPAIIRTLSSSEGSLRVQQACSRAVAAMARYGIDP 120

Query: 137 TTPDDKKRHVIHSLCNPLSESLLGS--QESLTYGAALCLKALVDSDNWRFASDEMVNKVC 196
           TTP+DKK +VIHSLC PLS+SL+ S  Q+ L  G+ALCLK+LVD DNWR AS EMVN VC
Sbjct: 121 TTPEDKKTNVIHSLCKPLSDSLIDSQHQQHLALGSALCLKSLVDCDNWRSASSEMVNNVC 180

Query: 197 QNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQILKCGVVEKNSQKRL 256
           Q++A ALE  S++  SHM LVM L+K NP  VE YARL +++GL+IL  GVVE +SQKRL
Sbjct: 181 QSLAVALEATSSEAKSHMALVMALSKHNPFTVEAYARLFVKSGLRILDLGVVEGDSQKRL 240

Query: 257 SAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYETLQTAKRISADKVS 316
            AIQM+NFLMK L+P SI SEL+ I +EME  Q DQ  YVK AA+ET++ A+R+  +   
Sbjct: 241 LAIQMLNFLMKNLNPKSISSELELIYQEMEKYQKDQ-HYVKMAAHETMRQAERLICEADP 300

Query: 317 KMD----KSPSSVTGS 327
             D    K  +S++GS
Sbjct: 301 MFDAENCKPRNSLSGS 315

[Close]

BLAST of CmoCh03G002590 vs. TAIR 10
Match: AT3G03970.3 (ARM repeat superfamily protein )

HSP 1 Score: 326.2 bits (835), Expect = 5.5e-89
Identity = 180/316 (56.96%), Postives = 232/316 (73.42%), Query Frame = 0


Query: 17  MSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPVFLAQVSENKETGALTG 76
           M +NL    R+E ANLDKD D+ ++AM  L++ VK+LD+K + VF+AQ+S+ KE G  +G
Sbjct: 1   MGRNLGSAFRQELANLDKDPDSHKTAMSNLRSIVKDLDAKVVHVFVAQLSDVKEIGLESG 60

Query: 77  ECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQACSKVVPAIARYGIDP 136
             T+SL+E LAR HGV I P ID IM +II+TL+SS GS  +QQACS+ V A+ARYGIDP
Sbjct: 61  GYTVSLFEDLARAHGVKIAPHIDIIMPAIIRTLSSSEGSLRVQQACSRAVAAMARYGIDP 120

Query: 137 TTPDDKKRHVIHSLCNPLSESLLGS--QESLTYGAALCLKALVDSDNWRFASDEMVNKVC 196
           TTP+DKK +VIHSLC PLS+SL+ S  Q+ L  G+ALCLK+LVD DNWR AS EMVN VC
Sbjct: 121 TTPEDKKTNVIHSLCKPLSDSLIDSQHQQHLALGSALCLKSLVDCDNWRSASSEMVNNVC 180

Query: 197 QNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQILKCGVVEKNSQKRL 256
           Q++A ALE  S++  SHM LVM L+K NP  VE YARL +++GL+IL  GVVE +SQKRL
Sbjct: 181 QSLAVALEATSSEAKSHMALVMALSKHNPFTVEAYARLFVKSGLRILDLGVVEGDSQKRL 240

Query: 257 SAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYETLQTAKRISADKVS 316
            AIQM+NFLMK L+P SI SEL+ I +EME  Q DQ  YVK AA+ET++ A+R+  +   
Sbjct: 241 LAIQMLNFLMKNLNPKSISSELELIYQEMEKYQKDQ-HYVKMAAHETMRQAERLICEADP 300

Query: 317 KMD----KSPSSVTGS 327
             D    K  +S++GS
Sbjct: 301 MFDAENCKPRNSLSGS 315

[Close]

BLAST of CmoCh03G002590 vs. TAIR 10
Match: AT3G03970.2 (ARM repeat superfamily protein )

HSP 1 Score: 326.2 bits (835), Expect = 5.5e-89
Identity = 180/316 (56.96%), Postives = 232/316 (73.42%), Query Frame = 0


Query: 17  MSKNLSPILRREFANLDKDADTRRSAMKALKTYVKELDSKAIPVFLAQVSENKETGALTG 76
           M +NL    R+E ANLDKD D+ ++AM  L++ VK+LD+K + VF+AQ+S+ KE G  +G
Sbjct: 1   MGRNLGSAFRQELANLDKDPDSHKTAMSNLRSIVKDLDAKVVHVFVAQLSDVKEIGLESG 60

Query: 77  ECTISLYEVLARVHGVNIVPQIDRIMSSIIKTLASSAGSFPLQQACSKVVPAIARYGIDP 136
             T+SL+E LAR HGV I P ID IM +II+TL+SS GS  +QQACS+ V A+ARYGIDP
Sbjct: 61  GYTVSLFEDLARAHGVKIAPHIDIIMPAIIRTLSSSEGSLRVQQACSRAVAAMARYGIDP 120

Query: 137 TTPDDKKRHVIHSLCNPLSESLLGS--QESLTYGAALCLKALVDSDNWRFASDEMVNKVC 196
           TTP+DKK +VIHSLC PLS+SL+ S  Q+ L  G+ALCLK+LVD DNWR AS EMVN VC
Sbjct: 121 TTPEDKKTNVIHSLCKPLSDSLIDSQHQQHLALGSALCLKSLVDCDNWRSASSEMVNNVC 180

Query: 197 QNVAGALEEQSTQTNSHMGLVMTLAKRNPRIVEPYARLLLQAGLQILKCGVVEKNSQKRL 256
           Q++A ALE  S++  SHM LVM L+K NP  VE YARL +++GL+IL  GVVE +SQKRL
Sbjct: 181 QSLAVALEATSSEAKSHMALVMALSKHNPFTVEAYARLFVKSGLRILDLGVVEGDSQKRL 240

Query: 257 SAIQMINFLMKCLDPWSIFSELQAIIEEMENCQFDQMAYVKGAAYETLQTAKRISADKVS 316
            AIQM+NFLMK L+P SI SEL+ I +EME  Q DQ  YVK AA+ET++ A+R+  +   
Sbjct: 241 LAIQMLNFLMKNLNPKSISSELELIYQEMEKYQKDQ-HYVKMAAHETMRQAERLICEADP 300

Query: 317 KMD----KSPSSVTGS 327
             D    K  +S++GS
Sbjct: 301 MFDAENCKPRNSLSGS 315

The following BLAST results are available for this feature:

BLAST of CmoCh03G002590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XVI1	7.3e-147	63.86	Protein SINE1 OS=Arabidopsis thaliana OX=3702 GN=SINE1 PE=1 SV=1	[more]
Q9SQR5	7.7e-88	56.96	Protein SINE2 OS=Arabidopsis thaliana OX=3702 GN=SINE2 PE=1 SV=1	[more]
F4IK92	1.8e-04	21.82	TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=TOR1L2 PE=4 SV=1	[more]
Q93ZH1	2.4e-04	22.42	TORTIFOLIA1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=TOR1L4 PE=2 SV=1	[more]

BLAST of CmoCh03G002590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GDF9	0.0e+00	100.00	protein SINE1-like OS=Cucurbita moschata OX=3662 GN=LOC111452973 PE=4 SV=1	[more]
A0A6J1IS37	0.0e+00	95.65	protein SINE1-like OS=Cucurbita maxima OX=3661 GN=LOC111478192 PE=4 SV=1	[more]
A0A5A7UWA1	7.3e-291	85.44	ARM repeat superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3B5D3	7.3e-291	85.44	uncharacterized protein LOC103485976 OS=Cucumis melo OX=3656 GN=LOC103485976 PE=...	[more]
A0A0A0KYP2	9.5e-291	85.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192160 PE=4 SV=1	[more]

BLAST of CmoCh03G002590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949649.1	0.0e+00	100.00	protein SINE1-like [Cucurbita moschata]	[more]
KAG6603492.1	0.0e+00	98.06	Protein SINE1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023543378.1	0.0e+00	96.62	protein SINE1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022978118.1	0.0e+00	95.65	protein SINE1-like [Cucurbita maxima]	[more]
XP_023522166.1	0.0e+00	96.53	protein SINE1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh03G002590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54385.1	5.2e-148	63.86	ARM repeat superfamily protein	[more]
AT1G54385.2	5.2e-148	63.86	ARM repeat superfamily protein	[more]
AT3G03970.1	5.5e-89	56.96	ARM repeat superfamily protein	[more]
AT3G03970.3	5.5e-89	56.96	ARM repeat superfamily protein	[more]
AT3G03970.2	5.5e-89	56.96	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 5..319 e-value: 3.3E-10 score: 40.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 311..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 315..331
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 518..532
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 502..516
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 339..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 481..545
None	No IPR available	PANTHER	PTHR12794	GEMIN2	coord: 17..615
None	No IPR available	PANTHER	PTHR12794:SF2	PROTEIN SINE1	coord: 17..615
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 11..303

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G002590.1	CmoCh03G002590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000387	spliceosomal snRNP assembly
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0032797	SMN complex