CmoCh03G002040 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G002040
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Reverse transcriptase
Location	Cmo_Chr03: 3337507 .. 3339254 (+)
RNA-Seq Expression	CmoCh03G002040
Synteny	CmoCh03G002040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCATAGACGCAACAATAAACTCCCGACCGAGCAAGAGCACCTTGATAGACTCAGGTGCGACCCACAACTTCATCGCCGACCAAGAAGCACGAAGATTGGGACTCACCATAGAAAAGAACCCCGAAAAATTGAAAGCTGTCAACTTCGAGGCCTTGCCTATCGTGGGAGTCTCCAAAAGAGTCCCCTTGAAATTAGGGGCCTGGTCAGGAGAGATGGACCTTGTTGTGGTTCGCATGGAAGACTTTGACGTGGTACTTGGGATGGACTGCTTTCTAGAACACAAAGTTATCCCAATGCCACTAGCGAAATGCTTGGTGATTACCGACCACAACCCCACAGTAATACTTGCAAGCATCAAGCAACCATGTAATCTTACAATAATTTCGGCCATACAATTGAAAAGAGGACTCACACGAGAGGAACCTACATTTATGACTATACTCATGATGGAAAAAGTGACCACTAGGGAAACTATTCCAAGCGAAATCAATGATGTACTAGACAGTTATGCTGACATAATGCCAGAGAGCTTACCACAAACATTACCACCCCGTCGAGGCATCGATCATGAAATTGAACTCCTCCCCGGGGTTAAACCCCTAGCAAAGAACACATACTGGATGGCTCCCCCTGAGCTAGCCGAATTGAGGAAACAACTAGATGAGTTGTTGGCGGCAGGATTCATTCACCTTGCAAAGGCACCTTACGAAGCCCCCATACTGTTTCAGAAAAAGAAGGATGGGACGTTGCGTCTGTGCATAGATTATAGAGCCTTGAACAAGGTGACTATACGCAACAAATACTCATTGCCGATAATATCTGACTTGTTTGACCAGCTTCATGGGGTTAAATACTTCACGAAGTTGAACTTACGATCAGGGTATTACCAAGTATGTATCGCCGAAGGGGACGAGCCCAAGACGACATGCGTAACAAGGTATGGGGCTTTTGAGTTCCTGGTAATGCCCTTTGGTCTGACAAATGCCCTAGCTACGTTTTGCACATTAATGAACCAGGTCATCTACGAATACTTGGATCAGTTCGTCGTAGTATACCTTGACGACATAGTTGTATGCAGCACAACCCTAGAGAAACACAAGGTGCACCTGAAGCTAGTGTTTGACAAGCTGCGGCAGAATCAGTTGTATGTCAAGAGAGAAAAATCTGCCTTCGCACAAACATGTATCAACTTCCTTGGACATGTCATCCGTTGTGAACAGATCGGTATGGATAGTGACAAGATAAAAGCTATCCAAGAGTGGAAATCCCTACTTCCGTATCCGATGTACAATCCTTCCTAGGATTGGCAAACTATTATAGGCGGTTCGTCAAAGGGTTTTCATGACGAGCCGCCCCATTAATAGAACTTCTAAAGAAAGACCACCCTTGGTCGTGGTCAAATGAATGTCAAATGGCATTTGAAGATCTGAAGGCAACCATGACGAGGGGTCCTGTCCTCGGCTTAGTGGATGTTGCTAAACCATTTGAAATAAAGACAGATGCTTCCGACTTTACCCTAGGCAGTGTCCTTATTCAAGAAGGCCACCCCATCGCTTATGAAAGTCGAAAGTTCAATGATGCTGAAAGAAGGTACACTGCCTCTGAAAAAGAAATGCTAGTTGTGGTCCATTGCCTACGAGTCTGGAGACAATACCTCTTGGGATCACAATTCGTAGTGAAGACGGATAACAACACCATTTGCCACTTCTTCGATCAACCAAAATTGACGATAAAACAAGCCTGA

mRNA sequence

ATGTTCATAGACGCAACAATAAACTCCCGACCGAGCAAGAGCACCTTGATAGACTCAGGTGCGACCCACAACTTCATCGCCGACCAAGAAGCACGAAGATTGGGACTCACCATAGAAAAGAACCCCGAAAAATTGAAAGCTGTCAACTTCGAGGCCTTGCCTATCGTGGGAGTCTCCAAAAGAGTCCCCTTGAAATTAGGGGCCTGGTCAGGAGAGATGGACCTTGTTGTGGTTCGCATGGAAGACTTTGACGTGGTACTTGGGATGGACTGCTTTCTAGAACACAAAGTTATCCCAATGCCACTAGCGAAATGCTTGGTGATTACCGACCACAACCCCACAGTAATACTTGCAAGCATCAAGCAACCATGTAATCTTACAATAATTTCGGCCATACAATTGAAAAGAGGACTCACACGAGAGGAACCTACATTTATGACTATACTCATGATGGAAAAAGTGACCACTAGGGAAACTATTCCAAGCGAAATCAATGATGTACTAGACAGTTATGCTGACATAATGCCAGAGAGCTTACCACAAACATTACCACCCCGTCGAGGCATCGATCATGAAATTGAACTCCTCCCCGGGGTTAAACCCCTAGCAAAGAACACATACTGGATGGCTCCCCCTGAGCTAGCCGAATTGAGGAAACAACTAGATGAGTTGTTGGCGGCAGGATTCATTCACCTTGCAAAGGCACCTTACGAAGCCCCCATACTGTTTCAGAAAAAGAAGGATGGGACGTTGCGTCTGTGCATAGATTATAGAGCCTTGAACAAGGTGACTATACGCAACAAATACTCATTGCCGATAATATCTGACTTGTTTGACCAGCTTCATGGGGTTAAATACTTCACGAAGTTGAACTTACGATCAGGGTATTACCAAGTATGTATCGCCGAAGGGGACGAGCCCAAGACGACATGCGTAACAAGGTATGGGGCTTTTGAGTTCCTGGTAATGCCCTTTGGTCTGACAAATGCCCTAGCTACGTTTTGCACATTAATGAACCAGGTCATCTACGAATACTTGGATCAGTTCGTCGTAGTATACCTTGACGACATAGTTGTATGCAGCACAACCCTAGAGAAACACAAGGTGCACCTGAAGCTAGTGTTTGACAAGCTGCGGCAGAATCAGTTGTATGTCAAGAGAGAAAAATCTGCCTTCGCACAAACATGTATCAACTTCCTTGGACATGTCATCCGTTGTGAACAGATCGAACTTCTAAAGAAAGACCACCCTTGGTCGTGGTCAAATGAATGTCAAATGGCATTTGAAGATCTGAAGGCAACCATGACGAGGGGTCCTGTCCTCGGCTTAGTGGATGTTGCTAAACCATTTGAAATAAAGACAGATGCTTCCGACTTTACCCTAGGCAGTGTCCTTATTCAAGAAGGCCACCCCATCGCTTATGAAAGTCGAAAGTTCAATGATGCTGAAAGAAGGTACACTGCCTCTGAAAAAGAAATGCTAGTTGTGGTCCATTGCCTACGAGTCTGGAGACAATACCTCTTGGGATCACAATTCGTAGTGAAGACGGATAACAACACCATTTGCCACTTCTTCGATCAACCAAAATTGACGATAAAACAAGCCTGA

Coding sequence (CDS)

ATGTTCATAGACGCAACAATAAACTCCCGACCGAGCAAGAGCACCTTGATAGACTCAGGTGCGACCCACAACTTCATCGCCGACCAAGAAGCACGAAGATTGGGACTCACCATAGAAAAGAACCCCGAAAAATTGAAAGCTGTCAACTTCGAGGCCTTGCCTATCGTGGGAGTCTCCAAAAGAGTCCCCTTGAAATTAGGGGCCTGGTCAGGAGAGATGGACCTTGTTGTGGTTCGCATGGAAGACTTTGACGTGGTACTTGGGATGGACTGCTTTCTAGAACACAAAGTTATCCCAATGCCACTAGCGAAATGCTTGGTGATTACCGACCACAACCCCACAGTAATACTTGCAAGCATCAAGCAACCATGTAATCTTACAATAATTTCGGCCATACAATTGAAAAGAGGACTCACACGAGAGGAACCTACATTTATGACTATACTCATGATGGAAAAAGTGACCACTAGGGAAACTATTCCAAGCGAAATCAATGATGTACTAGACAGTTATGCTGACATAATGCCAGAGAGCTTACCACAAACATTACCACCCCGTCGAGGCATCGATCATGAAATTGAACTCCTCCCCGGGGTTAAACCCCTAGCAAAGAACACATACTGGATGGCTCCCCCTGAGCTAGCCGAATTGAGGAAACAACTAGATGAGTTGTTGGCGGCAGGATTCATTCACCTTGCAAAGGCACCTTACGAAGCCCCCATACTGTTTCAGAAAAAGAAGGATGGGACGTTGCGTCTGTGCATAGATTATAGAGCCTTGAACAAGGTGACTATACGCAACAAATACTCATTGCCGATAATATCTGACTTGTTTGACCAGCTTCATGGGGTTAAATACTTCACGAAGTTGAACTTACGATCAGGGTATTACCAAGTATGTATCGCCGAAGGGGACGAGCCCAAGACGACATGCGTAACAAGGTATGGGGCTTTTGAGTTCCTGGTAATGCCCTTTGGTCTGACAAATGCCCTAGCTACGTTTTGCACATTAATGAACCAGGTCATCTACGAATACTTGGATCAGTTCGTCGTAGTATACCTTGACGACATAGTTGTATGCAGCACAACCCTAGAGAAACACAAGGTGCACCTGAAGCTAGTGTTTGACAAGCTGCGGCAGAATCAGTTGTATGTCAAGAGAGAAAAATCTGCCTTCGCACAAACATGTATCAACTTCCTTGGACATGTCATCCGTTGTGAACAGATCGAACTTCTAAAGAAAGACCACCCTTGGTCGTGGTCAAATGAATGTCAAATGGCATTTGAAGATCTGAAGGCAACCATGACGAGGGGTCCTGTCCTCGGCTTAGTGGATGTTGCTAAACCATTTGAAATAAAGACAGATGCTTCCGACTTTACCCTAGGCAGTGTCCTTATTCAAGAAGGCCACCCCATCGCTTATGAAAGTCGAAAGTTCAATGATGCTGAAAGAAGGTACACTGCCTCTGAAAAAGAAATGCTAGTTGTGGTCCATTGCCTACGAGTCTGGAGACAATACCTCTTGGGATCACAATTCGTAGTGAAGACGGATAACAACACCATTTGCCACTTCTTCGATCAACCAAAATTGACGATAAAACAAGCCTGA

Protein sequence

MFIDATINSRPSKSTLIDSGATHNFIADQEARRLGLTIEKNPEKLKAVNFEALPIVGVSKRVPLKLGAWSGEMDLVVVRMEDFDVVLGMDCFLEHKVIPMPLAKCLVITDHNPTVILASIKQPCNLTIISAIQLKRGLTREEPTFMTILMMEKVTTRETIPSEINDVLDSYADIMPESLPQTLPPRRGIDHEIELLPGVKPLAKNTYWMAPPELAELRKQLDELLAAGFIHLAKAPYEAPILFQKKKDGTLRLCIDYRALNKVTIRNKYSLPIISDLFDQLHGVKYFTKLNLRSGYYQVCIAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVIYEYLDQFVVVYLDDIVVCSTTLEKHKVHLKLVFDKLRQNQLYVKREKSAFAQTCINFLGHVIRCEQIELLKKDHPWSWSNECQMAFEDLKATMTRGPVLGLVDVAKPFEIKTDASDFTLGSVLIQEGHPIAYESRKFNDAERRYTASEKEMLVVVHCLRVWRQYLLGSQFVVKTDNNTICHFFDQPKLTIKQA

Homology

[Close]

BLAST of CmoCh03G002040 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.3e-54
Identity = 133/430 (30.93%), Postives = 215/430 (50.00%), Query Frame = 0


Query: 147 TILMMEKVTTRETIPSEINDVLDSYADIMPESLPQTLP-PRRGIDHEIELLPGVKPLAKN 206
           T+  M KV+     P E+ D+   + DI  E+  + LP P +G++ E+EL      L   
Sbjct: 358 TLSQMNKVSNIVKEP-ELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIR 417

Query: 207 TYWMAPPELAELRKQLDELLAAGFIHLAKAPYEAPILFQKKKDGTLRLCIDYRALNKVTI 266
            Y + P ++  +  ++++ L +G I  +KA    P++F  KK+GTLR+ +DY+ LNK   
Sbjct: 418 NYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVK 477

Query: 267 RNKYSLPIISDLFDQLHGVKYFTKLNLRSGYYQVCIAEGDEPKTTCVTRYGAFEFLVMPF 326
            N Y LP+I  L  ++ G   FTKL+L+S Y+ + + +GDE K       G FE+LVMP+
Sbjct: 478 PNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPY 537

Query: 327 GLTNALATFCTLMNQVIYEYLDQFVVVYLDDIVVCSTTLEKHKVHLKLVFDKLRQNQLYV 386
           G++ A A F   +N ++ E  +  VV Y+DDI++ S +  +H  H+K V  KL+   L +
Sbjct: 538 GISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLII 597

Query: 387 KREKSAFAQTCINFLGHVIR------CEQ------------------------------- 446
            + K  F Q+ + F+G+ I       C++                               
Sbjct: 598 NQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFI 657

Query: 447 ----------IELLKKDHPWSWSNECQMAFEDLKATMTRGPVLGLVDVAKPFEIKTDASD 506
                       LLKKD  W W+     A E++K  +   PVL   D +K   ++TDASD
Sbjct: 658 PKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASD 717

Query: 507 FTLGSVLIQEG-----HPIAYESRKFNDAERRYTASEKEMLVVVHCLRVWRQYLLGS--Q 522
             +G+VL Q+      +P+ Y S K + A+  Y+ S+KEML ++  L+ WR YL  +   
Sbjct: 718 VAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEP 777

[Close]

BLAST of CmoCh03G002040 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.3e-54
Identity = 133/430 (30.93%), Postives = 215/430 (50.00%), Query Frame = 0


Query: 147 TILMMEKVTTRETIPSEINDVLDSYADIMPESLPQTLP-PRRGIDHEIELLPGVKPLAKN 206
           T+  M KV+     P E+ D+   + DI  E+  + LP P +G++ E+EL      L   
Sbjct: 358 TLSQMNKVSNIVKEP-ELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIR 417

Query: 207 TYWMAPPELAELRKQLDELLAAGFIHLAKAPYEAPILFQKKKDGTLRLCIDYRALNKVTI 266
            Y + P ++  +  ++++ L +G I  +KA    P++F  KK+GTLR+ +DY+ LNK   
Sbjct: 418 NYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVK 477

Query: 267 RNKYSLPIISDLFDQLHGVKYFTKLNLRSGYYQVCIAEGDEPKTTCVTRYGAFEFLVMPF 326
            N Y LP+I  L  ++ G   FTKL+L+S Y+ + + +GDE K       G FE+LVMP+
Sbjct: 478 PNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPY 537

Query: 327 GLTNALATFCTLMNQVIYEYLDQFVVVYLDDIVVCSTTLEKHKVHLKLVFDKLRQNQLYV 386
           G++ A A F   +N ++ E  +  VV Y+DDI++ S +  +H  H+K V  KL+   L +
Sbjct: 538 GISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLII 597

Query: 387 KREKSAFAQTCINFLGHVIR------CEQ------------------------------- 446
            + K  F Q+ + F+G+ I       C++                               
Sbjct: 598 NQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFI 657

Query: 447 ----------IELLKKDHPWSWSNECQMAFEDLKATMTRGPVLGLVDVAKPFEIKTDASD 506
                       LLKKD  W W+     A E++K  +   PVL   D +K   ++TDASD
Sbjct: 658 PKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASD 717

Query: 507 FTLGSVLIQEG-----HPIAYESRKFNDAERRYTASEKEMLVVVHCLRVWRQYLLGS--Q 522
             +G+VL Q+      +P+ Y S K + A+  Y+ S+KEML ++  L+ WR YL  +   
Sbjct: 718 VAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEP 777

[Close]

BLAST of CmoCh03G002040 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.3e-54
Identity = 133/430 (30.93%), Postives = 215/430 (50.00%), Query Frame = 0


Query: 147 TILMMEKVTTRETIPSEINDVLDSYADIMPESLPQTLP-PRRGIDHEIELLPGVKPLAKN 206
           T+  M KV+     P E+ D+   + DI  E+  + LP P +G++ E+EL      L   
Sbjct: 358 TLSQMNKVSNIVKEP-ELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIR 417

Query: 207 TYWMAPPELAELRKQLDELLAAGFIHLAKAPYEAPILFQKKKDGTLRLCIDYRALNKVTI 266
            Y + P ++  +  ++++ L +G I  +KA    P++F  KK+GTLR+ +DY+ LNK   
Sbjct: 418 NYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVK 477

Query: 267 RNKYSLPIISDLFDQLHGVKYFTKLNLRSGYYQVCIAEGDEPKTTCVTRYGAFEFLVMPF 326
            N Y LP+I  L  ++ G   FTKL+L+S Y+ + + +GDE K       G FE+LVMP+
Sbjct: 478 PNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPY 537

Query: 327 GLTNALATFCTLMNQVIYEYLDQFVVVYLDDIVVCSTTLEKHKVHLKLVFDKLRQNQLYV 386
           G++ A A F   +N ++ E  +  VV Y+DDI++ S +  +H  H+K V  KL+   L +
Sbjct: 538 GISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLII 597

Query: 387 KREKSAFAQTCINFLGHVIR------CEQ------------------------------- 446
            + K  F Q+ + F+G+ I       C++                               
Sbjct: 598 NQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFI 657

Query: 447 ----------IELLKKDHPWSWSNECQMAFEDLKATMTRGPVLGLVDVAKPFEIKTDASD 506
                       LLKKD  W W+     A E++K  +   PVL   D +K   ++TDASD
Sbjct: 658 PKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASD 717

Query: 507 FTLGSVLIQEG-----HPIAYESRKFNDAERRYTASEKEMLVVVHCLRVWRQYLLGS--Q 522
             +G+VL Q+      +P+ Y S K + A+  Y+ S+KEML ++  L+ WR YL  +   
Sbjct: 718 VAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEP 777

[Close]

BLAST of CmoCh03G002040 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.3e-54
Identity = 133/430 (30.93%), Postives = 215/430 (50.00%), Query Frame = 0


Query: 147 TILMMEKVTTRETIPSEINDVLDSYADIMPESLPQTLP-PRRGIDHEIELLPGVKPLAKN 206
           T+  M KV+     P E+ D+   + DI  E+  + LP P +G++ E+EL      L   
Sbjct: 358 TLSQMNKVSNIVKEP-ELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIR 417

Query: 207 TYWMAPPELAELRKQLDELLAAGFIHLAKAPYEAPILFQKKKDGTLRLCIDYRALNKVTI 266
            Y + P ++  +  ++++ L +G I  +KA    P++F  KK+GTLR+ +DY+ LNK   
Sbjct: 418 NYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVK 477

Query: 267 RNKYSLPIISDLFDQLHGVKYFTKLNLRSGYYQVCIAEGDEPKTTCVTRYGAFEFLVMPF 326
            N Y LP+I  L  ++ G   FTKL+L+S Y+ + + +GDE K       G FE+LVMP+
Sbjct: 478 PNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPY 537

Query: 327 GLTNALATFCTLMNQVIYEYLDQFVVVYLDDIVVCSTTLEKHKVHLKLVFDKLRQNQLYV 386
           G++ A A F   +N ++ E  +  VV Y+DDI++ S +  +H  H+K V  KL+   L +
Sbjct: 538 GISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLII 597

Query: 387 KREKSAFAQTCINFLGHVIR------CEQ------------------------------- 446
            + K  F Q+ + F+G+ I       C++                               
Sbjct: 598 NQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFI 657

Query: 447 ----------IELLKKDHPWSWSNECQMAFEDLKATMTRGPVLGLVDVAKPFEIKTDASD 506
                       LLKKD  W W+     A E++K  +   PVL   D +K   ++TDASD
Sbjct: 658 PKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASD 717

Query: 507 FTLGSVLIQEG-----HPIAYESRKFNDAERRYTASEKEMLVVVHCLRVWRQYLLGS--Q 522
             +G+VL Q+      +P+ Y S K + A+  Y+ S+KEML ++  L+ WR YL  +   
Sbjct: 718 VAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEP 777

[Close]

BLAST of CmoCh03G002040 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.3e-54
Identity = 133/430 (30.93%), Postives = 215/430 (50.00%), Query Frame = 0


Query: 147 TILMMEKVTTRETIPSEINDVLDSYADIMPESLPQTLP-PRRGIDHEIELLPGVKPLAKN 206
           T+  M KV+     P E+ D+   + DI  E+  + LP P +G++ E+EL      L   
Sbjct: 358 TLSQMNKVSNIVKEP-ELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIR 417

Query: 207 TYWMAPPELAELRKQLDELLAAGFIHLAKAPYEAPILFQKKKDGTLRLCIDYRALNKVTI 266
            Y + P ++  +  ++++ L +G I  +KA    P++F  KK+GTLR+ +DY+ LNK   
Sbjct: 418 NYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVK 477

Query: 267 RNKYSLPIISDLFDQLHGVKYFTKLNLRSGYYQVCIAEGDEPKTTCVTRYGAFEFLVMPF 326
            N Y LP+I  L  ++ G   FTKL+L+S Y+ + + +GDE K       G FE+LVMP+
Sbjct: 478 PNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPY 537

Query: 327 GLTNALATFCTLMNQVIYEYLDQFVVVYLDDIVVCSTTLEKHKVHLKLVFDKLRQNQLYV 386
           G++ A A F   +N ++ E  +  VV Y+DDI++ S +  +H  H+K V  KL+   L +
Sbjct: 538 GISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLII 597

Query: 387 KREKSAFAQTCINFLGHVIR------CEQ------------------------------- 446
            + K  F Q+ + F+G+ I       C++                               
Sbjct: 598 NQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFI 657

Query: 447 ----------IELLKKDHPWSWSNECQMAFEDLKATMTRGPVLGLVDVAKPFEIKTDASD 506
                       LLKKD  W W+     A E++K  +   PVL   D +K   ++TDASD
Sbjct: 658 PKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASD 717

Query: 507 FTLGSVLIQEG-----HPIAYESRKFNDAERRYTASEKEMLVVVHCLRVWRQYLLGS--Q 522
             +G+VL Q+      +P+ Y S K + A+  Y+ S+KEML ++  L+ WR YL  +   
Sbjct: 718 VAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEP 777

[Close]

BLAST of CmoCh03G002040 vs. ExPASy TrEMBL
Match: A0A6J1D906 (Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1)

HSP 1 Score: 804.3 bits (2076), Expect = 3.1e-229
Identity = 404/582 (69.42%), Postives = 456/582 (78.35%), Query Frame = 0


Query: 1    MFIDATINSRPSKSTLIDSGATHNFIADQEARRLGLTIEKNPEKLKAVNFEALPIVGVSK 60
            MF+DATIN   +KST++DSGATHNFI++QEARRL LTIEK+  K+K VNFEALPIVGVSK
Sbjct: 455  MFVDATINCNXAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKVVNFEALPIVGVSK 514

Query: 61   RVPLKLGAWSGEMDLVVVRMEDFDVVLGMDCFLEHKVIPMPLAKCLVITDHNPTVILASI 120
            RV LKLG W+G +D VVVRM+DFDVVLGM+  +EHKVIPMPLAKC+++T ++PTV+  SI
Sbjct: 515  RVMLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAKCMIVTSNSPTVVTTSI 574

Query: 121  KQPCNLTIISAIQLKRGLTREEPTFMTILMMEKVTTRETIPSEINDVLDSYADIMPESLP 180
            KQP  + +ISA+QLK+GL REEPTFM I M+E+      +P EI  V+  Y DIMP+SLP
Sbjct: 575  KQPGGIRMISALQLKKGLNREEPTFMAIPMVEQPVETRDVPPEIQVVMKEYVDIMPDSLP 634

Query: 181  QTLPPRRGIDHEIELLPGVKPLAKNTYWMAPPELAELRKQLDELLAAGFIHLAKAPYEAP 240
            +TLPPRRGIDHEIEL+PG KP AKN Y MAPPELAELRKQLDELL AGFI  AKAP+ AP
Sbjct: 635  KTLPPRRGIDHEIELIPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPFGAP 694

Query: 241  ILFQKKKDGTLRLCIDYRALNKVTIRNKYSLPIISDLFDQLHGVKYFTKLNLRSGYYQVC 300
            +LFQKKKDGTLRLCIDYRALNKVT+RNKY LPII+DLFDQLHG KYFTKL+LRSGYYQV 
Sbjct: 695  VLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIITDLFDQLHGAKYFTKLDLRSGYYQVR 754

Query: 301  IAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVIYEYLDQFVVVYLDDIVVC 360
            IAEGDEPKTTCVTRYGAFEFLVM FGLTNA ATFCT+MNQV +EYLDQFVVVYLDDIVV 
Sbjct: 755  IAEGDEPKTTCVTRYGAFEFLVMXFGLTNAPATFCTMMNQVFHEYLDQFVVVYLDDIVVY 814

Query: 361  STTLEKHKVHLKLVFDKLRQNQLYVKREKSAFAQTCINFLGHVIRCEQI----------- 420
            S TL++H++HL+LVFDKLRQNQLYVK+EK AFAQ  I FLGHVI   QI           
Sbjct: 815  SPTLKEHQIHLRLVFDKLRQNQLYVKKEKCAFAQKRIXFLGHVIEQGQISMDTDKVKAIQ 874

Query: 421  ------------------------------------ELLKKDHPWSWSNECQMAFEDLKA 480
                                                ELLKK   W WS E Q AFEDLKA
Sbjct: 875  EWRVPTSVIELRSFLGLANYYRRFIEGFSRRATPMTELLKKGMTWMWSKESQDAFEDLKA 934

Query: 481  TMTRGPVLGLVDVAKPFEIKTDASDFTLGSVLIQEGHPIAYESRKFNDAERRYTASEKEM 536
             M +GPVLGL DV KPFE++TDASD+ LG VL+Q+ HPI YESRK N+AERRYT SEKEM
Sbjct: 935  AMMKGPVLGLADVTKPFEVETDASDYALGGVLLQDDHPIXYESRKLNNAERRYTVSEKEM 994

[Close]

BLAST of CmoCh03G002040 vs. ExPASy TrEMBL
Match: A0A5A7T3M3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002020 PE=4 SV=1)

HSP 1 Score: 766.1 bits (1977), Expect = 9.4e-218
Identity = 379/582 (65.12%), Postives = 446/582 (76.63%), Query Frame = 0


Query: 1    MFIDATINSRPSKSTLIDSGATHNFIADQEARRLGLTIEKNPEKLKAVNFEALPIVGVSK 60
            M++D  IN +P+KST++DSGATHNFI + EA+RL L  EK+ E++KAVN  ALPI+G+ K
Sbjct: 466  MYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAERMKAVNSAALPIIGLVK 525

Query: 61   RVPLKLGAWSGEMDLVVVRMEDFDVVLGMDCFLEHKVIPMPLAKCLVITDHNPTVILASI 120
            R  ++LG WSG +D VVV+M+DFDVVLGM+  LEH+VIPMPLAKCLVIT   P+V+   +
Sbjct: 526  RTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDL 585

Query: 121  KQPCNLTIISAIQLKRGLTREEPTFMTILMMEKVTTRETIPSEINDVLDSYADIMPESLP 180
            +QP  L +ISA+QLK+GL+R+EPTFM I +     + ET+P EI  VL+ Y D+MP+SLP
Sbjct: 586  RQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLP 645

Query: 181  QTLPPRRGIDHEIELLPGVKPLAKNTYWMAPPELAELRKQLDELLAAGFIHLAKAPYEAP 240
            ++LPPRR IDHEIEL+PG KP AKN Y MAPPELAELRKQLDELL AGFI  AKAPY AP
Sbjct: 646  KSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAP 705

Query: 241  ILFQKKKDGTLRLCIDYRALNKVTIRNKYSLPIISDLFDQLHGVKYFTKLNLRSGYYQVC 300
            +LFQ+KKDG+LRLCIDYRALNK+T+RNKY LPII+DLFD+LHG KYF+KL+LRSGYYQV 
Sbjct: 706  VLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVR 765

Query: 301  IAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVIYEYLDQFVVVYLDDIVVC 360
            IAEGDEPKTTCVTRYGAFEFLVMPFGLTNA ATFCTLMNQV +EYLD+FVVVYLDDIVV 
Sbjct: 766  IAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVY 825

Query: 361  STTLEKHKVHLKLVFDKLRQNQLYVKREKSAFAQTCINFLGHVIRCEQI----------- 420
            STT+E+H+ HL+ VF KL++NQLYVKREK +FAQ  INFLGHVI C +I           
Sbjct: 826  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIR 885

Query: 421  ------------------------------------ELLKKDHPWSWSNECQMAFEDLKA 480
                                                ELLKKD  W+W  ECQ AF+ LK 
Sbjct: 886  DWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQTAFDGLKQ 945

Query: 481  TMTRGPVLGLVDVAKPFEIKTDASDFTLGSVLIQEGHPIAYESRKFNDAERRYTASEKEM 536
             +  GP+LG+ DV KPFE++TDASD+ LG VL+Q GHPIAYESRK N AERRYT SEKEM
Sbjct: 946  ALMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEM 1005

[Close]

BLAST of CmoCh03G002040 vs. ExPASy TrEMBL
Match: A0A5D3C9P8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00750 PE=4 SV=1)

HSP 1 Score: 764.2 bits (1972), Expect = 3.6e-217
Identity = 379/582 (65.12%), Postives = 445/582 (76.46%), Query Frame = 0


Query: 1    MFIDATINSRPSKSTLIDSGATHNFIADQEARRLGLTIEKNPEKLKAVNFEALPIVGVSK 60
            M++D  IN +P+KST++DSGATHNFI + EA+RL L  EK+  ++KAVN  ALPI+G+ K
Sbjct: 436  MYVDTWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVK 495

Query: 61   RVPLKLGAWSGEMDLVVVRMEDFDVVLGMDCFLEHKVIPMPLAKCLVITDHNPTVILASI 120
            R  ++LG WSG +D VVV+M+DFDVVLGM+  LEH+VIPMPLAKCLVIT   P+V+   +
Sbjct: 496  RTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDL 555

Query: 121  KQPCNLTIISAIQLKRGLTREEPTFMTILMMEKVTTRETIPSEINDVLDSYADIMPESLP 180
            +QP  L +ISA+QLK+GL+R+EPTFM I +     + ET+P EI  VL+ Y D+MP+SLP
Sbjct: 556  RQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVRVLEKYRDVMPDSLP 615

Query: 181  QTLPPRRGIDHEIELLPGVKPLAKNTYWMAPPELAELRKQLDELLAAGFIHLAKAPYEAP 240
            ++LPPRR IDHEIEL+PG KP AKN Y MAPPELAELRKQLDELL AGFI  AKAPY AP
Sbjct: 616  KSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAP 675

Query: 241  ILFQKKKDGTLRLCIDYRALNKVTIRNKYSLPIISDLFDQLHGVKYFTKLNLRSGYYQVC 300
            +LFQKKKDG+LRLCIDYRALNK+T+RNKY LPII+DLFD+LHG KYF+KL+LRSGYYQV 
Sbjct: 676  VLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVR 735

Query: 301  IAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVIYEYLDQFVVVYLDDIVVC 360
            IAEGDEPKTTCVTRYGAFEFLVMPFGLTNA ATFCTLMNQV +EYLD+FVVVYLDDIVV 
Sbjct: 736  IAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVY 795

Query: 361  STTLEKHKVHLKLVFDKLRQNQLYVKREKSAFAQTCINFLGHVIRCEQI----------- 420
            STT+E+H+ HL+ VF KL++NQLYVKREK +FAQ  INFLGHVI C +I           
Sbjct: 796  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIR 855

Query: 421  ------------------------------------ELLKKDHPWSWSNECQMAFEDLKA 480
                                                ELLKKD  W+W  ECQ AF+ LK 
Sbjct: 856  DWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQ 915

Query: 481  TMTRGPVLGLVDVAKPFEIKTDASDFTLGSVLIQEGHPIAYESRKFNDAERRYTASEKEM 536
             +  GP+LG+ DV KPFE++TDASD+ LG VL+Q GHPIAYESRK N AERRYT SEKEM
Sbjct: 916  ALMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEM 975

[Close]

BLAST of CmoCh03G002040 vs. ExPASy TrEMBL
Match: A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1)

HSP 1 Score: 763.5 bits (1970), Expect = 6.1e-217
Identity = 378/582 (64.95%), Postives = 445/582 (76.46%), Query Frame = 0


Query: 1    MFIDATINSRPSKSTLIDSGATHNFIADQEARRLGLTIEKNPEKLKAVNFEALPIVGVSK 60
            M++D  IN +P+KST++DSGATHNFI + EA+RL L  EK+  ++KAVN  ALPI+G+ K
Sbjct: 466  MYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVK 525

Query: 61   RVPLKLGAWSGEMDLVVVRMEDFDVVLGMDCFLEHKVIPMPLAKCLVITDHNPTVILASI 120
            R  ++LG WSG +D VVV+M+DFDVVLGM+  LEH+VIPMPLAKCLVIT   P+V+   +
Sbjct: 526  RTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDL 585

Query: 121  KQPCNLTIISAIQLKRGLTREEPTFMTILMMEKVTTRETIPSEINDVLDSYADIMPESLP 180
            +QP  L +ISA+QLK+GL+R+EPTFM I +     + ET+P EI  VL+ Y D+MP+SLP
Sbjct: 586  RQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLP 645

Query: 181  QTLPPRRGIDHEIELLPGVKPLAKNTYWMAPPELAELRKQLDELLAAGFIHLAKAPYEAP 240
            ++LPPRR IDHEIEL+PG KP AKN Y MAPPELAELRKQLDELL AGFI  AKAPY AP
Sbjct: 646  KSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAP 705

Query: 241  ILFQKKKDGTLRLCIDYRALNKVTIRNKYSLPIISDLFDQLHGVKYFTKLNLRSGYYQVC 300
            +LFQ+KKDG+LRLCIDYRALNK+T+RNKY LPII+DLFD+LHG KYF+KL+LRSGYYQV 
Sbjct: 706  VLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVR 765

Query: 301  IAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVIYEYLDQFVVVYLDDIVVC 360
            IAEGDEPKTTCVTRYGAFEFLVMPFGLTNA ATFCTLMNQV +EYLD+FVVVYLDDIVV 
Sbjct: 766  IAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVY 825

Query: 361  STTLEKHKVHLKLVFDKLRQNQLYVKREKSAFAQTCINFLGHVIRCEQI----------- 420
            STT+E+H+ HL+ VF KL++NQLYVKREK +FAQ  INFLGHVI C +I           
Sbjct: 826  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIR 885

Query: 421  ------------------------------------ELLKKDHPWSWSNECQMAFEDLKA 480
                                                ELLKKD  W+W  ECQ AF+ LK 
Sbjct: 886  DWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQTAFDGLKQ 945

Query: 481  TMTRGPVLGLVDVAKPFEIKTDASDFTLGSVLIQEGHPIAYESRKFNDAERRYTASEKEM 536
             +  GP+LG+ DV KPFE++TDASD+ LG VL+Q GHPIAYESRK N AERRYT SEKEM
Sbjct: 946  ALMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEM 1005

[Close]

BLAST of CmoCh03G002040 vs. ExPASy TrEMBL
Match: A0A5D3BRZ6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00060 PE=4 SV=1)

HSP 1 Score: 763.5 bits (1970), Expect = 6.1e-217
Identity = 378/582 (64.95%), Postives = 445/582 (76.46%), Query Frame = 0


Query: 1    MFIDATINSRPSKSTLIDSGATHNFIADQEARRLGLTIEKNPEKLKAVNFEALPIVGVSK 60
            M++D  IN +P+KST++DSGATHNFI + EA+RL L  EK+  ++KAVN  ALPI+G+ K
Sbjct: 466  MYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVK 525

Query: 61   RVPLKLGAWSGEMDLVVVRMEDFDVVLGMDCFLEHKVIPMPLAKCLVITDHNPTVILASI 120
            R  ++LG WSG +D VVV+M+DFDVVLGM+  LEH+VIPMPLAKCLVIT   P+V+   +
Sbjct: 526  RTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDL 585

Query: 121  KQPCNLTIISAIQLKRGLTREEPTFMTILMMEKVTTRETIPSEINDVLDSYADIMPESLP 180
            +QP  L +ISA+QLK+GL+R+EPTFM I +     + ET+P EI  VL+ Y D+MP+SLP
Sbjct: 586  RQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLP 645

Query: 181  QTLPPRRGIDHEIELLPGVKPLAKNTYWMAPPELAELRKQLDELLAAGFIHLAKAPYEAP 240
            ++LPPRR IDHEIEL+PG KP AKN Y MAPPELAELRKQLDELL AGFI  AKAPY AP
Sbjct: 646  KSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAP 705

Query: 241  ILFQKKKDGTLRLCIDYRALNKVTIRNKYSLPIISDLFDQLHGVKYFTKLNLRSGYYQVC 300
            +LFQ+KKDG+LRLCIDYRALNK+T+RNKY LPII+DLFD+LHG KYF+KL+LRSGYYQV 
Sbjct: 706  VLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVR 765

Query: 301  IAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVIYEYLDQFVVVYLDDIVVC 360
            IAEGDEPKTTCVTRYGAFEFLVMPFGLTNA ATFCTLMNQV +EYLD+FVVVYLDDIVV 
Sbjct: 766  IAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVY 825

Query: 361  STTLEKHKVHLKLVFDKLRQNQLYVKREKSAFAQTCINFLGHVIRCEQI----------- 420
            STT+E+H+ HL+ VF KL++NQLYVKREK +FAQ  INFLGHVI C +I           
Sbjct: 826  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIR 885

Query: 421  ------------------------------------ELLKKDHPWSWSNECQMAFEDLKA 480
                                                ELLKKD  W+W  ECQ AF+ LK 
Sbjct: 886  DWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQTAFDGLKQ 945

Query: 481  TMTRGPVLGLVDVAKPFEIKTDASDFTLGSVLIQEGHPIAYESRKFNDAERRYTASEKEM 536
             +  GP+LG+ DV KPFE++TDASD+ LG VL+Q GHPIAYESRK N AERRYT SEKEM
Sbjct: 946  ALMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEM 1005

[Close]

BLAST of CmoCh03G002040 vs. NCBI nr
Match: XP_023537907.1 (uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 917.5 bits (2370), Expect = 5.2e-263
Identity = 463/582 (79.55%), Postives = 489/582 (84.02%), Query Frame = 0


Query: 1    MFIDATINSRPSKSTLIDSGATHNFIADQEARRLGLTIEKNPEKLKAVNFEALPIVGVSK 60
            MF+DATINSR SKSTLIDSGATHNFIADQEARRLGLTI K+P K+KAVN EALPIVGVSK
Sbjct: 461  MFVDATINSRLSKSTLIDSGATHNFIADQEARRLGLTIGKDPGKMKAVNSEALPIVGVSK 520

Query: 61   RVPLKLGAWSGEMDLVVVRMEDFDVVLGMDCFLEHKVIPMPLAKCLVITDHNPTVILASI 120
             VP K+G W+GE+DLVVVRM+DFDVVLGM+  LEHKVIPMPLAKCLVITD NPTVI ASI
Sbjct: 521  GVPFKIGDWTGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVITDRNPTVIPASI 580

Query: 121  KQPCNLTIISAIQLKRGLTREEPTFMTILMMEKVTTRETIPSEINDVLDSYADIMPESLP 180
            KQP NL +ISAIQLKRGL REEPTFM I ++E+ TT ET+P EI DVLDSY DIMPESLP
Sbjct: 581  KQPGNLRMISAIQLKRGLAREEPTFMAIPLIEEATTEETVPEEIKDVLDSYTDIMPESLP 640

Query: 181  QTLPPRRGIDHEIELLPGVKPLAKNTYWMAPPELAELRKQLDELLAAGFIHLAKAPYEAP 240
            QTLPPRRGIDHEIELLPGVKP AKN Y MAPPELAELRKQLDELL AGFI  AKAPY AP
Sbjct: 641  QTLPPRRGIDHEIELLPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYGAP 700

Query: 241  ILFQKKKDGTLRLCIDYRALNKVTIRNKYSLPIISDLFDQLHGVKYFTKLNLRSGYYQVC 300
            +LFQKKKDGTLRLCIDYRALNKVT+RNKY LPIISDLFDQLHG KYFTKL+LRSGYYQV 
Sbjct: 701  VLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVR 760

Query: 301  IAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVIYEYLDQFVVVYLDDIVVC 360
            IAEGDEPKTTCVTRYGAFEFLVMPFGLTNA ATFCTLMNQV YEYLDQFV+VYLDDIVV 
Sbjct: 761  IAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVY 820

Query: 361  STTLEKHKVHLKLVFDKLRQNQLYVKREKSAFAQTCINFLGHVIRCEQI----------- 420
            STTLE+HKVHLKLVFDKLRQNQLYVK+EK AFAQTCI+FLGHV+RC QI           
Sbjct: 821  STTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCIHFLGHVVRCGQISMDSDKIKAIQ 880

Query: 421  ------------------------------------ELLKKDHPWSWSNECQMAFEDLKA 480
                                                ELLKKDHPWSWSN+CQMAFE+LK 
Sbjct: 881  EWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKT 940

Query: 481  TMTRGPVLGLVDVAKPFEIKTDASDFTLGSVLIQEGHPIAYESRKFNDAERRYTASEKEM 536
            TMTRGPVLGLVDV KPFE++TDASDF LG VLIQEGHPIAYESRK NDAERRYT SEKEM
Sbjct: 941  TMTRGPVLGLVDVTKPFEVETDASDFALGGVLIQEGHPIAYESRKLNDAERRYTVSEKEM 1000

[Close]

BLAST of CmoCh03G002040 vs. NCBI nr
Match: XP_023524533.1 (uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 911.0 bits (2353), Expect = 4.9e-261
Identity = 460/582 (79.04%), Postives = 487/582 (83.68%), Query Frame = 0


Query: 1    MFIDATINSRPSKSTLIDSGATHNFIADQEARRLGLTIEKNPEKLKAVNFEALPIVGVSK 60
            MF+DATINSR SKSTLIDSGATHNFIADQEARRLGLTI K+P K+KAVN EALPIVGVSK
Sbjct: 461  MFVDATINSRLSKSTLIDSGATHNFIADQEARRLGLTIGKDPGKMKAVNSEALPIVGVSK 520

Query: 61   RVPLKLGAWSGEMDLVVVRMEDFDVVLGMDCFLEHKVIPMPLAKCLVITDHNPTVILASI 120
             VP K+G W+GE+DLVVVRM+DFDVVLGM+  LEHKVIPMPLAKCLVITD NPTVI ASI
Sbjct: 521  GVPFKIGDWTGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVITDRNPTVIPASI 580

Query: 121  KQPCNLTIISAIQLKRGLTREEPTFMTILMMEKVTTRETIPSEINDVLDSYADIMPESLP 180
            KQP NL +ISAIQLKRGL REEPTFM I ++E+ TT ET+P EI +VLD+Y DIMPESLP
Sbjct: 581  KQPGNLRMISAIQLKRGLAREEPTFMAIPLIEEATTEETVPEEIKEVLDNYTDIMPESLP 640

Query: 181  QTLPPRRGIDHEIELLPGVKPLAKNTYWMAPPELAELRKQLDELLAAGFIHLAKAPYEAP 240
            QTLPPRRGIDHEIELLPGVKP AKN Y MAPPELAELRKQLDELL AGFI  AKAPY AP
Sbjct: 641  QTLPPRRGIDHEIELLPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYGAP 700

Query: 241  ILFQKKKDGTLRLCIDYRALNKVTIRNKYSLPIISDLFDQLHGVKYFTKLNLRSGYYQVC 300
            +LFQKKKDGTLRLCIDYRALNKVT+RNKY LPIISDLFDQLHG KYFTKL+LRSGYYQV 
Sbjct: 701  VLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVR 760

Query: 301  IAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVIYEYLDQFVVVYLDDIVVC 360
            I EGDEPKTTCVTRYGAFEFLVMPFGLTNA ATF TLMNQV YEYLDQFV+VYLDDIVV 
Sbjct: 761  IVEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFYTLMNQVFYEYLDQFVIVYLDDIVVY 820

Query: 361  STTLEKHKVHLKLVFDKLRQNQLYVKREKSAFAQTCINFLGHVIRCEQI----------- 420
            STTLE+HKVHLKLVFDKLRQNQLYVK+EK AFAQTCINFLGHV+RC QI           
Sbjct: 821  STTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQISMDSDKIKAIQ 880

Query: 421  ------------------------------------ELLKKDHPWSWSNECQMAFEDLKA 480
                                                ELLKKDHPWSWSN+CQMAFE+LK 
Sbjct: 881  EWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKT 940

Query: 481  TMTRGPVLGLVDVAKPFEIKTDASDFTLGSVLIQEGHPIAYESRKFNDAERRYTASEKEM 536
            TMTRGPVLGLVDV KPFE++TDASDF LG VLIQEGHPIAYESRK NDAERRYT SEKEM
Sbjct: 941  TMTRGPVLGLVDVTKPFEVETDASDFALGGVLIQEGHPIAYESRKLNDAERRYTVSEKEM 1000

[Close]

BLAST of CmoCh03G002040 vs. NCBI nr
Match: XP_022150099.1 (uncharacterized protein LOC111018360 [Momordica charantia])

HSP 1 Score: 804.3 bits (2076), Expect = 6.4e-229
Identity = 404/582 (69.42%), Postives = 456/582 (78.35%), Query Frame = 0


Query: 1    MFIDATINSRPSKSTLIDSGATHNFIADQEARRLGLTIEKNPEKLKAVNFEALPIVGVSK 60
            MF+DATIN   +KST++DSGATHNFI++QEARRL LTIEK+  K+K VNFEALPIVGVSK
Sbjct: 455  MFVDATINCNXAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKVVNFEALPIVGVSK 514

Query: 61   RVPLKLGAWSGEMDLVVVRMEDFDVVLGMDCFLEHKVIPMPLAKCLVITDHNPTVILASI 120
            RV LKLG W+G +D VVVRM+DFDVVLGM+  +EHKVIPMPLAKC+++T ++PTV+  SI
Sbjct: 515  RVMLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAKCMIVTSNSPTVVTTSI 574

Query: 121  KQPCNLTIISAIQLKRGLTREEPTFMTILMMEKVTTRETIPSEINDVLDSYADIMPESLP 180
            KQP  + +ISA+QLK+GL REEPTFM I M+E+      +P EI  V+  Y DIMP+SLP
Sbjct: 575  KQPGGIRMISALQLKKGLNREEPTFMAIPMVEQPVETRDVPPEIQVVMKEYVDIMPDSLP 634

Query: 181  QTLPPRRGIDHEIELLPGVKPLAKNTYWMAPPELAELRKQLDELLAAGFIHLAKAPYEAP 240
            +TLPPRRGIDHEIEL+PG KP AKN Y MAPPELAELRKQLDELL AGFI  AKAP+ AP
Sbjct: 635  KTLPPRRGIDHEIELIPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPFGAP 694

Query: 241  ILFQKKKDGTLRLCIDYRALNKVTIRNKYSLPIISDLFDQLHGVKYFTKLNLRSGYYQVC 300
            +LFQKKKDGTLRLCIDYRALNKVT+RNKY LPII+DLFDQLHG KYFTKL+LRSGYYQV 
Sbjct: 695  VLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIITDLFDQLHGAKYFTKLDLRSGYYQVR 754

Query: 301  IAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVIYEYLDQFVVVYLDDIVVC 360
            IAEGDEPKTTCVTRYGAFEFLVM FGLTNA ATFCT+MNQV +EYLDQFVVVYLDDIVV 
Sbjct: 755  IAEGDEPKTTCVTRYGAFEFLVMXFGLTNAPATFCTMMNQVFHEYLDQFVVVYLDDIVVY 814

Query: 361  STTLEKHKVHLKLVFDKLRQNQLYVKREKSAFAQTCINFLGHVIRCEQI----------- 420
            S TL++H++HL+LVFDKLRQNQLYVK+EK AFAQ  I FLGHVI   QI           
Sbjct: 815  SPTLKEHQIHLRLVFDKLRQNQLYVKKEKCAFAQKRIXFLGHVIEQGQISMDTDKVKAIQ 874

Query: 421  ------------------------------------ELLKKDHPWSWSNECQMAFEDLKA 480
                                                ELLKK   W WS E Q AFEDLKA
Sbjct: 875  EWRVPTSVIELRSFLGLANYYRRFIEGFSRRATPMTELLKKGMTWMWSKESQDAFEDLKA 934

Query: 481  TMTRGPVLGLVDVAKPFEIKTDASDFTLGSVLIQEGHPIAYESRKFNDAERRYTASEKEM 536
             M +GPVLGL DV KPFE++TDASD+ LG VL+Q+ HPI YESRK N+AERRYT SEKEM
Sbjct: 935  AMMKGPVLGLADVTKPFEVETDASDYALGGVLLQDDHPIXYESRKLNNAERRYTVSEKEM 994

[Close]

BLAST of CmoCh03G002040 vs. NCBI nr
Match: KAA0037573.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 766.1 bits (1977), Expect = 1.9e-217
Identity = 379/582 (65.12%), Postives = 446/582 (76.63%), Query Frame = 0


Query: 1    MFIDATINSRPSKSTLIDSGATHNFIADQEARRLGLTIEKNPEKLKAVNFEALPIVGVSK 60
            M++D  IN +P+KST++DSGATHNFI + EA+RL L  EK+ E++KAVN  ALPI+G+ K
Sbjct: 466  MYVDTWINQKPTKSTMVDSGATHNFITEVEAKRLNLRWEKDAERMKAVNSAALPIIGLVK 525

Query: 61   RVPLKLGAWSGEMDLVVVRMEDFDVVLGMDCFLEHKVIPMPLAKCLVITDHNPTVILASI 120
            R  ++LG WSG +D VVV+M+DFDVVLGM+  LEH+VIPMPLAKCLVIT   P+V+   +
Sbjct: 526  RTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDL 585

Query: 121  KQPCNLTIISAIQLKRGLTREEPTFMTILMMEKVTTRETIPSEINDVLDSYADIMPESLP 180
            +QP  L +ISA+QLK+GL+R+EPTFM I +     + ET+P EI  VL+ Y D+MP+SLP
Sbjct: 586  RQPDGLKMISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLP 645

Query: 181  QTLPPRRGIDHEIELLPGVKPLAKNTYWMAPPELAELRKQLDELLAAGFIHLAKAPYEAP 240
            ++LPPRR IDHEIEL+PG KP AKN Y MAPPELAELRKQLDELL AGFI  AKAPY AP
Sbjct: 646  KSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAP 705

Query: 241  ILFQKKKDGTLRLCIDYRALNKVTIRNKYSLPIISDLFDQLHGVKYFTKLNLRSGYYQVC 300
            +LFQ+KKDG+LRLCIDYRALNK+T+RNKY LPII+DLFD+LHG KYF+KL+LRSGYYQV 
Sbjct: 706  VLFQRKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVR 765

Query: 301  IAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVIYEYLDQFVVVYLDDIVVC 360
            IAEGDEPKTTCVTRYGAFEFLVMPFGLTNA ATFCTLMNQV +EYLD+FVVVYLDDIVV 
Sbjct: 766  IAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVY 825

Query: 361  STTLEKHKVHLKLVFDKLRQNQLYVKREKSAFAQTCINFLGHVIRCEQI----------- 420
            STT+E+H+ HL+ VF KL++NQLYVKREK +FAQ  INFLGHVI C +I           
Sbjct: 826  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIR 885

Query: 421  ------------------------------------ELLKKDHPWSWSNECQMAFEDLKA 480
                                                ELLKKD  W+W  ECQ AF+ LK 
Sbjct: 886  DWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQTAFDGLKQ 945

Query: 481  TMTRGPVLGLVDVAKPFEIKTDASDFTLGSVLIQEGHPIAYESRKFNDAERRYTASEKEM 536
             +  GP+LG+ DV KPFE++TDASD+ LG VL+Q GHPIAYESRK N AERRYT SEKEM
Sbjct: 946  ALMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEM 1005

[Close]

BLAST of CmoCh03G002040 vs. NCBI nr
Match: TYK07954.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 764.2 bits (1972), Expect = 7.4e-217
Identity = 379/582 (65.12%), Postives = 445/582 (76.46%), Query Frame = 0


Query: 1    MFIDATINSRPSKSTLIDSGATHNFIADQEARRLGLTIEKNPEKLKAVNFEALPIVGVSK 60
            M++D  IN +P+KST++DSGATHNFI + EA+RL L  EK+  ++KAVN  ALPI+G+ K
Sbjct: 436  MYVDTWINEKPTKSTMVDSGATHNFITEAEAKRLNLRWEKDAGRMKAVNSAALPIIGLVK 495

Query: 61   RVPLKLGAWSGEMDLVVVRMEDFDVVLGMDCFLEHKVIPMPLAKCLVITDHNPTVILASI 120
            R  ++LG WSG +D VVV+M+DFDVVLGM+  LEH+VIPMPLAKCLVIT   P+V+   +
Sbjct: 496  RTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDL 555

Query: 121  KQPCNLTIISAIQLKRGLTREEPTFMTILMMEKVTTRETIPSEINDVLDSYADIMPESLP 180
            +QP  L +ISA+QLK+GL+R+EPTFM I +     + ET+P EI  VL+ Y D+MP+SLP
Sbjct: 556  RQPDGLKMISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVRVLEKYRDVMPDSLP 615

Query: 181  QTLPPRRGIDHEIELLPGVKPLAKNTYWMAPPELAELRKQLDELLAAGFIHLAKAPYEAP 240
            ++LPPRR IDHEIEL+PG KP AKN Y MAPPELAELRKQLDELL AGFI  AKAPY AP
Sbjct: 616  KSLPPRRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAP 675

Query: 241  ILFQKKKDGTLRLCIDYRALNKVTIRNKYSLPIISDLFDQLHGVKYFTKLNLRSGYYQVC 300
            +LFQKKKDG+LRLCIDYRALNK+T+RNKY LPII+DLFD+LHG KYF+KL+LRSGYYQV 
Sbjct: 676  VLFQKKKDGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVR 735

Query: 301  IAEGDEPKTTCVTRYGAFEFLVMPFGLTNALATFCTLMNQVIYEYLDQFVVVYLDDIVVC 360
            IAEGDEPKTTCVTRYGAFEFLVMPFGLTNA ATFCTLMNQV +EYLD+FVVVYLDDIVV 
Sbjct: 736  IAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVY 795

Query: 361  STTLEKHKVHLKLVFDKLRQNQLYVKREKSAFAQTCINFLGHVIRCEQI----------- 420
            STT+E+H+ HL+ VF KL++NQLYVKREK +FAQ  INFLGHVI C +I           
Sbjct: 796  STTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIR 855

Query: 421  ------------------------------------ELLKKDHPWSWSNECQMAFEDLKA 480
                                                ELLKKD  W+W  ECQ AF+ LK 
Sbjct: 856  DWAMPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQ 915

Query: 481  TMTRGPVLGLVDVAKPFEIKTDASDFTLGSVLIQEGHPIAYESRKFNDAERRYTASEKEM 536
             +  GP+LG+ DV KPFE++TDASD+ LG VL+Q GHPIAYESRK N AERRYT SEKEM
Sbjct: 916  ALMEGPLLGIADVTKPFEVETDASDYALGGVLLQNGHPIAYESRKLNAAERRYTVSEKEM 975

The following BLAST results are available for this feature:

BLAST of CmoCh03G002040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	1.3e-54	30.93	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.3e-54	30.93	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.3e-54	30.93	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.3e-54	30.93	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	1.3e-54	30.93	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of CmoCh03G002040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D906	3.1e-229	69.42	Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1	[more]
A0A5A7T3M3	9.4e-218	65.12	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27...	[more]
A0A5D3C9P8	3.6e-217	65.12	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26...	[more]
A0A5D3C4R1	6.1e-217	64.95	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5D3BRZ6	6.1e-217	64.95	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]

BLAST of CmoCh03G002040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537907.1	5.2e-263	79.55	uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]	[more]
XP_023524533.1	4.9e-261	79.04	uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo]	[more]
XP_022150099.1	6.4e-229	69.42	uncharacterized protein LOC111018360 [Momordica charantia]	[more]
KAA0037573.1	1.9e-217	65.12	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK07954.1	7.4e-217	65.12	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of CmoCh03G002040 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 420..514 e-value: 1.2E-29 score: 102.2
None	No IPR available	GENE3D	3.10.20.370		coord: 445..516 e-value: 1.6E-6 score: 30.0
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 189..329 e-value: 2.1E-77 score: 261.2
None	No IPR available	PFAM	PF08284	RVP_2	coord: 7..97 e-value: 2.9E-11 score: 43.3
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 413..527
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 154..405 coord: 413..527
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 154..405
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 451..535 e-value: 9.29534E-34 score: 122.216
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 3..94 e-value: 4.22466E-17 score: 74.6804
None	No IPR available	CDD	cd01647	RT_LTR	coord: 228..404 e-value: 3.82036E-77 score: 238.649
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..118 e-value: 3.4E-18 score: 67.6
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 2..96
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 245..403 e-value: 2.0E-22 score: 79.8
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 225..404 score: 11.47899
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 269..404 e-value: 2.1E-77 score: 261.2
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 167..529

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G002040.1	CmoCh03G002040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0005488	binding
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0016779	nucleotidyltransferase activity