CmoCh03G001770 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G001770
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Beta-galactosidase
Location	Cmo_Chr03: 2792056 .. 2794384 (-)
RNA-Seq Expression	CmoCh03G001770
Synteny	CmoCh03G001770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGATTTAAGGCACACCTTCTTTCGGAACAAAATGGAATCATTAGTGAGACTGAAGAATTACGATGCATTTTATGACACGGTGCCAATAGAAATTGATGGAGGTCCCATTTATCTAATTGGAGATGGAAATATCACAACAGATTTGTCAACAAATTTATGGTCTTATAAGTCTCGCAAGCACTAAGTTTAAGTCATTCTTTGACAGCGAGTGCGGGTGTGGCCCAAAGGATGATTTGTCAATCCAGCGTAAGGAAAAGCTTTCGCATGTAGTTAGACAAATTCTTTCTTCTAGGACTCGGGTATAGTTTCAACCAAGGTGCTCCCAAGAAAAGATTCTCGGGCAAGGTTTGAAATCAAATTCCGTTCAAACACGGGGACGAAGTGGCTTAGTGAGAAGAAGGGACGATAAGCTGAAATGGTGAGTTGCGCTTACGCCTGAATTACCTACTTTTTCCAATCTTAGCTTGCCATACGAGGTGCTTGGGAGACTTTACCCTACAATGACCAAGACCGCCAGCTCCCGAGGCAGCATGAACCCTCTTTACTTTATGAGGGAGACAAGGAGGAGTCCACTGTATTTAACCTTAACCATCAGCTAATGGCTCCAGCCTTGGCAAATTGGCAACTTTCTATCTAACAGTTATCCATCAACTAGCTCAGATTTCCGAGATGCTAGCACAATTGACCTTGAGGACAGACATCGAAAAGCCCTTTCTTTAAAGTACTTATCTTACCGAACCCATAAAGACCCTAAGTGCTTGAGTAAGTAAGTAGTACGTCTTTCCACCAAGAAGATAGGGAGAAAAGGAAAAGGGCACAGTCCCCTCTTTCCGCCTTCCTCGTTCCCCTAGACCTTCCCCGCAGAGTACTTCCTCAGGGCTCGAACCTGCCGCAATGCACCAACTCCTCATTGTTGGACCGAATGAGACCTCTATAGAAAGAAGCCATTTTGTGGACTAATATGAACTACTCTTCACTTCGCAGACTTTCACGCTCACAAGGATTGGTACCCTAGACATTAGGTAGACTGACGTTCTGTTTTAGCTAACAACTGAACTTAGAGCCCTTTATAGATATTACACACGACTGTAAAGACCTGATAAAGTAAGCCACCCTGGATGGGAGGAAGGATAAGATAGCCAGCACGTCTGATAAGATGATGAGGAATCCTTAGACGGACGGGCTGGAATGCGCCGCTTCGCTTAGTCGACTGAAAGAGAATCGAAGCATCCTACTTCACTGTAAATGCCGCTACGAATTCCATCCAACGAGCTAAAGGTCATACTAAGTTCCTTCTCTTTTCCTGCCTGAGACGGGTACTCCTGCCTCTGCCCCCAGTAGCTTCCTCTCTTGCATCCATTCACGAATCAAAATCAGGATAGTCAGTAGCTCCTCCAGCCTTGTCGGCATATCCTGAGAGAGGTCTCTTAAGAGTGTATAAACAAGAACTCAATCTAGTAATCCCGAGCATCAGAAGAAGATTTAGAAAGTCTTTTCCCACCCACAGGGAATACCTGGAGGCTTCTGGGGAATACAACCCCTAGAACAGCAAGCACTCCAAGAGGCTCGGCGGAGAGAGGGCCTGAAAATGAGGAAAGATTGATTCAAGCTAAATCACTGAATCAAATATGATAATCCTTCTTTCTACACCTTCTACTTCTACATTAACGCTGGAAACTGGATAGAAAGATAGCACACAAGAACCAAGAACAAGTGATTTAGCTCAAGCATTTACTCGTCTTGGGGCTAAGGTGGGATCTACTCAAGGACCTACTGGAGCAACAACCGTCTTTTTTATTGGTACCGCAGTAGCCCTTTGGTGGATTAAATGGAGAAATGAAGTAACTTTACCATCCGATGTTCTCACATAGTACCAAATGGAGCGCGTTAAATGAAAAATCTACCGGAAGGTGAATGACATGGTACAAAGCTAGCTTTAAGACCCCTTCGGGAACTGCCCAGTCGCATTGGACATGCAAGAGATGGGCAATCAGACTTGGGTAAATGGGCAAAGCATAGGACGATTTTTGCCTTCTTTCATATCTAGAAACGATGGTTGCAGTTGGACCTGTGACTACAGAGGTGCATATGACTCTAGCAATTGTGTTAAAAATTGTGGGAGTCCCTCTCAAAGATGGTATCACGTTCCAAGATCGTTTCTGTCAAATGACACAAATACATTGATTTTATTTAAAGAAATTGGTAGAAGTCCTCAACAAGTTACTGTTCAAACCATCACTATAGGAACTATATGTGGAAATGCTAATGAAGGAAGCACCTTCGAGTTGTCTCGTCAGGGAGGACATATCATTAAAAAATACTAG

mRNA sequence

ATGGTAGATTTAAGGCACACCTTCTTTCGGAACAAAATGGAATCATTAGTGAGACTGAAGAATTACGATGCATTTTATGACACGGTGCCAATAGAAATTGATGGAGACCCCTTCGGGAACTGCCCAGTCGCATTGGACATGCAAGAGATGGGCAATCAGACTTGGGTAAATGGGCAAAGCATAGGACGATTTTTGCCTTCTTTCATATCTAGAAACGATGGTTGCAGTTGGACCTGTGACTACAGAGGTGCATATGACTCTAGCAATTGTGTTAAAAATTGTGGGAGTCCCTCTCAAAGATGGTATCACGTTCCAAGATCGTTTCTGTCAAATGACACAAATACATTGATTTTATTTAAAGAAATTGGTAGAAGTCCTCAACAAGTTACTGTTCAAACCATCACTATAGGAACTATATGTGGAAATGCTAATGAAGGAAGCACCTTCGAGTTGTCTCGTCAGGGAGGACATATCATTAAAAAATACTAG

Coding sequence (CDS)

ATGGTAGATTTAAGGCACACCTTCTTTCGGAACAAAATGGAATCATTAGTGAGACTGAAGAATTACGATGCATTTTATGACACGGTGCCAATAGAAATTGATGGAGACCCCTTCGGGAACTGCCCAGTCGCATTGGACATGCAAGAGATGGGCAATCAGACTTGGGTAAATGGGCAAAGCATAGGACGATTTTTGCCTTCTTTCATATCTAGAAACGATGGTTGCAGTTGGACCTGTGACTACAGAGGTGCATATGACTCTAGCAATTGTGTTAAAAATTGTGGGAGTCCCTCTCAAAGATGGTATCACGTTCCAAGATCGTTTCTGTCAAATGACACAAATACATTGATTTTATTTAAAGAAATTGGTAGAAGTCCTCAACAAGTTACTGTTCAAACCATCACTATAGGAACTATATGTGGAAATGCTAATGAAGGAAGCACCTTCGAGTTGTCTCGTCAGGGAGGACATATCATTAAAAAATACTAG

Protein sequence

MVDLRHTFFRNKMESLVRLKNYDAFYDTVPIEIDGDPFGNCPVALDMQEMGNQTWVNGQSIGRFLPSFISRNDGCSWTCDYRGAYDSSNCVKNCGSPSQRWYHVPRSFLSNDTNTLILFKEIGRSPQQVTVQTITIGTICGNANEGSTFELSRQGGHIIKKY

Homology

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BLAST of CmoCh03G001770 vs. ExPASy Swiss-Prot
Match: Q9SCV5 (Beta-galactosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BGAL7 PE=2 SV=2)

HSP 1 Score: 136.3 bits (342), Expect = 3.0e-31
Identity = 61/118 (51.69%), Postives = 81/118 (68.64%), Query Frame = 0


Query: 37  PFGNCPVALDMQEMG-NQTWVNGQSIGRFLPSFISRNDGCSWTCDYRGAYDSSNCVKNCG 96
           P G  PV +D+  +G  + W+NGQSIGR+ PSF S +DGC   CDYRGAY S  C   CG
Sbjct: 632 PLGKEPVIVDLNGLGKGEAWINGQSIGRYWPSFNSSDDGCKDECDYRGAYGSDKCAFMCG 691

Query: 97  SPSQRWYHVPRSFL-SNDTNTLILFKEIGRSPQQVTVQTITIGTICGNANEGSTFELS 153
            P+QRWYHVPRSFL ++  NT+ LF+E+G +P  V  +T+ +GT+C  A+E +  ELS
Sbjct: 692 KPTQRWYHVPRSFLNASGHNTITLFEEMGGNPSMVNFKTVVVGTVCARAHEHNKVELS 749

[Close]

BLAST of CmoCh03G001770 vs. ExPASy Swiss-Prot
Match: P49676 (Beta-galactosidase OS=Brassica oleracea OX=3712 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.6e-29
Identity = 58/118 (49.15%), Postives = 78/118 (66.10%), Query Frame = 0


Query: 37  PFGNCPVALDMQEMG-NQTWVNGQSIGRFLPSFISRNDGCSWTCDYRGAYDSSNCVKNCG 96
           P G  PV +D+  +G  + W+NGQSIGR+ PSF S ++GC+  CDYRG Y S  C   CG
Sbjct: 634 PLGKDPVIVDLNGLGKGEVWINGQSIGRYWPSFNSSDEGCTEECDYRGEYGSDKCAFMCG 693

Query: 97  SPSQRWYHVPRSFLSN-DTNTLILFKEIGRSPQQVTVQTITIGTICGNANEGSTFELS 153
            P+QRWYHVPRSFL++   NT+ LF+E+G  P  V  +T+  G +C  A+E +  ELS
Sbjct: 694 KPTQRWYHVPRSFLNDKGHNTITLFEEMGGDPSMVKFKTVVTGRVCAKAHEHNKVELS 751

[Close]

BLAST of CmoCh03G001770 vs. ExPASy Swiss-Prot
Match: Q9SCV3 (Beta-galactosidase 9 OS=Arabidopsis thaliana OX=3702 GN=BGAL9 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.4e-28
Identity = 57/110 (51.82%), Postives = 77/110 (70.00%), Query Frame = 0


Query: 37  PFGNCPVALDMQEMG-NQTWVNGQSIGRFLPSFISRNDGCSWTCDYRGAYDSSNCVKNCG 96
           P G  PV L+++ MG  Q WVNGQ IGR+  + IS+ DGC  TCDYRGAY+S  C  NCG
Sbjct: 661 PAGTDPVVLNLESMGRGQAWVNGQHIGRYW-NIISQKDGCDRTCDYRGAYNSDKCTTNCG 720

Query: 97  SPSQRWYHVPRSFLSNDTNTLILFKEIGRSPQQVTVQTITIGTICGNANE 146
            P+Q  YHVPRS+L   +N L+LF+E G +P +++V+T+T G +CG  +E
Sbjct: 721 KPTQTRYHVPRSWLKPSSNLLVLFEETGGNPFKISVKTVTAGILCGQVSE 769

[Close]

BLAST of CmoCh03G001770 vs. ExPASy Swiss-Prot
Match: Q10NX8 (Beta-galactosidase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0255100 PE=1 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 1.4e-25
Identity = 52/110 (47.27%), Postives = 72/110 (65.45%), Query Frame = 0


Query: 37  PFGNCPVALDMQEMG-NQTWVNGQSIGRFLPSFISRNDGCSWTCDYRGAYDSSNCVKNCG 96
           P G+ PVA+D   MG  + WVNGQSIGR+ P+ ++   GC  +C+YRGAY S+ C+K CG
Sbjct: 646 PAGDDPVAIDFTGMGKGEAWVNGQSIGRYWPTNLAPQSGCVNSCNYRGAYSSNKCLKKCG 705

Query: 97  SPSQRWYHVPRSFLSNDTNTLILFKEIGRSPQQVTVQTITIGTICGNANE 146
            PSQ  YHVPRSFL   +N L+LF++ G  P  ++  T    +IC + +E
Sbjct: 706 QPSQTLYHVPRSFLQPGSNDLVLFEQFGGDPSMISFTTRQTSSICAHVSE 755

[Close]

BLAST of CmoCh03G001770 vs. ExPASy Swiss-Prot
Match: Q8W0A1 (Beta-galactosidase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0580200 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.2e-25
Identity = 56/125 (44.80%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 22  YDAFYDTVPIEIDGDPFGNCPVALDMQEMG-NQTWVNGQSIGRFLPSFISRNDGCSWTCD 81
           Y AF++         P G+ P+ALDM  MG  Q W+NGQ IGR+ P +  +  G   TCD
Sbjct: 615 YKAFFNA--------PDGDEPLALDMSSMGKGQIWINGQGIGRYWPGY--KASGNCGTCD 674

Query: 82  YRGAYDSSNCVKNCGSPSQRWYHVPRSFLSNDTNTLILFKEIGRSPQQVTVQTITIGTIC 141
           YRG YD + C  NCG  SQRWYHVPRS+LS   N L++F+E G  P  +++   +IG++C
Sbjct: 675 YRGEYDETKCQTNCGDSSQRWYHVPRSWLSPTGNLLVIFEEWGGDPTGISMVKRSIGSVC 729

Query: 142 GNANE 146
            + +E
Sbjct: 735 ADVSE 729

[Close]

BLAST of CmoCh03G001770 vs. ExPASy TrEMBL
Match: A0A0A0KRM6 (Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_5G169120 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 7.6e-54
Identity = 114/180 (63.33%), Postives = 124/180 (68.89%), Query Frame = 0


Query: 15  SLVRLKNYDAFYDTVPIEIDGDPF-------------GNC-------------------P 74
           S V LKNYDAFYD VP  IDG P               N                    P
Sbjct: 484 SNVGLKNYDAFYDVVPTGIDGGPIYLIGDENMTTDLSSNLWPYKENDMVQRLALKHLFDP 543

Query: 75  VALDMQEMG-NQTWVNGQSIGRFLPSFISRNDGCSWTCDYRGAYDSSNCVKNCGSPSQRW 134
           V LDMQ MG  Q WVNGQSIGRF PSFI+ ND CS TCDYRGAY+ S CV+NCG+PSQRW
Sbjct: 544 VVLDMQGMGKGQAWVNGQSIGRFWPSFIAGNDSCSATCDYRGAYNPSKCVENCGNPSQRW 603

Query: 135 YHVPRSFLSNDTNTLILFKEIGRSPQQVTVQTITIGTICGNANEGSTFELSRQGGHIIKK 162
           YHVPRSFLS+DTNTLILF+EIG +PQQV+VQTITIGTICGNANEGST ELS QGGH+I +
Sbjct: 604 YHVPRSFLSSDTNTLILFEEIGGNPQQVSVQTITIGTICGNANEGSTLELSCQGGHVISE 663

[Close]

BLAST of CmoCh03G001770 vs. ExPASy TrEMBL
Match: A0A5D3CJ19 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003860 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 5.4e-52
Identity = 114/214 (53.27%), Postives = 126/214 (58.88%), Query Frame = 0


Query: 13  MESLVRLKNYDAFYDTVPIEIDGDPF---------------------------------- 72
           + + V LKNYDAFYDTVP  IDG P                                   
Sbjct: 496 LSATVGLKNYDAFYDTVPTGIDGGPIYLIGDGNVTIDLSSNLWSYKVGLNGEMKQLYNPV 555

Query: 73  ------------------------------GNCPVALDMQEMG-NQTWVNGQSIGRFLPS 132
                                         G  PV LDMQ MG  Q WVNGQSIGRF PS
Sbjct: 556 FSQRTNWREINQKSIGRRMTWYKTSFKTPPGTDPVTLDMQGMGKGQAWVNGQSIGRFWPS 615

Query: 133 FISRNDGCSWTCDYRGAYDSSNCVKNCGSPSQRWYHVPRSFLSNDTNTLILFKEIGRSPQ 162
           FI+ ND CS TCDYRGAY+ S CV+NCG+PSQRWYH+PRSFLS+DTNTLILF+EIG +PQ
Sbjct: 616 FIAGNDSCSTTCDYRGAYNPSKCVENCGNPSQRWYHIPRSFLSDDTNTLILFEEIGGNPQ 675

[Close]

BLAST of CmoCh03G001770 vs. ExPASy TrEMBL
Match: A0A1S3BQ87 (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103492519 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 5.4e-52
Identity = 114/214 (53.27%), Postives = 126/214 (58.88%), Query Frame = 0


Query: 13  MESLVRLKNYDAFYDTVPIEIDGDPF---------------------------------- 72
           + + V LKNYDAFYDTVP  IDG P                                   
Sbjct: 657 LSATVGLKNYDAFYDTVPTGIDGGPIYLIGDGNVTIDLSSNLWSYKVGLNGEMKQLYNPV 716

Query: 73  ------------------------------GNCPVALDMQEMG-NQTWVNGQSIGRFLPS 132
                                         G  PV LDMQ MG  Q WVNGQSIGRF PS
Sbjct: 717 FSQRTNWREINQKSIGRRMTWYKTSFKTPPGTDPVTLDMQGMGKGQAWVNGQSIGRFWPS 776

Query: 133 FISRNDGCSWTCDYRGAYDSSNCVKNCGSPSQRWYHVPRSFLSNDTNTLILFKEIGRSPQ 162
           FI+ ND CS TCDYRGAY+ S CV+NCG+PSQRWYH+PRSFLS+DTNTLILF+EIG +PQ
Sbjct: 777 FIAGNDSCSTTCDYRGAYNPSKCVENCGNPSQRWYHIPRSFLSDDTNTLILFEEIGGNPQ 836

[Close]

BLAST of CmoCh03G001770 vs. ExPASy TrEMBL
Match: A0A5A7U918 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold761G00120 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 7.1e-52
Identity = 113/214 (52.80%), Postives = 126/214 (58.88%), Query Frame = 0


Query: 13  MESLVRLKNYDAFYDTVPIEIDGDPF---------------------------------- 72
           + + V LKNYDAFYDTVP  IDG P                                   
Sbjct: 496 LSATVGLKNYDAFYDTVPTGIDGGPIYLIGDGNVTIDLSSNLWSYKVGLNGEMKQLYNPV 555

Query: 73  ------------------------------GNCPVALDMQEMG-NQTWVNGQSIGRFLPS 132
                                         G  PV LDMQ MG  Q WVNGQSIGRF PS
Sbjct: 556 FSQRTNWRAINQKSIGRRMTWYKTSFKTPPGTDPVTLDMQGMGKGQAWVNGQSIGRFWPS 615

Query: 133 FISRNDGCSWTCDYRGAYDSSNCVKNCGSPSQRWYHVPRSFLSNDTNTLILFKEIGRSPQ 162
           FI+ ND CS TCDYRGAY+ S CV+NCG+PSQRWYH+PRSFLS+DTNTL+LF+EIG +PQ
Sbjct: 616 FIAGNDSCSTTCDYRGAYNPSKCVENCGNPSQRWYHIPRSFLSDDTNTLVLFEEIGGNPQ 675

[Close]

BLAST of CmoCh03G001770 vs. ExPASy TrEMBL
Match: A0A0A0M006 (Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_1G650110 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 7.8e-51
Identity = 113/214 (52.80%), Postives = 125/214 (58.41%), Query Frame = 0


Query: 13  MESLVRLKNYDAFYDTVPIEIDGDPF---------------------------------- 72
           + + V LKNYDAFYD VP  IDG P                                   
Sbjct: 538 LSATVGLKNYDAFYDMVPTGIDGGPIYLIGDGNVTTDLSSNLWSYKVGLNGEMKQIYNPM 597

Query: 73  ------------------------------GNCPVALDMQEMG-NQTWVNGQSIGRFLPS 132
                                         G  PV LDMQ MG  Q WVNGQSIGRF PS
Sbjct: 598 FSQRTNWIPLNQKSIGRRMTWYKTSFKTPAGIDPVVLDMQGMGKGQAWVNGQSIGRFWPS 657

Query: 133 FISRNDGCSWTCDYRGAYDSSNCVKNCGSPSQRWYHVPRSFLSNDTNTLILFKEIGRSPQ 162
           FI+ ND CS TCDYRGAY+ S CV+NCG+PSQRWYHVPRSFLS+DTNTLILF+EIG +PQ
Sbjct: 658 FIAGNDSCSATCDYRGAYNPSKCVENCGNPSQRWYHVPRSFLSSDTNTLILFEEIGGNPQ 717

[Close]

BLAST of CmoCh03G001770 vs. NCBI nr
Match: XP_008451143.1 (PREDICTED: beta-galactosidase 15-like [Cucumis melo])

HSP 1 Score: 213.8 bits (543), Expect = 1.1e-51
Identity = 114/214 (53.27%), Postives = 126/214 (58.88%), Query Frame = 0


Query: 13  MESLVRLKNYDAFYDTVPIEIDGDPF---------------------------------- 72
           + + V LKNYDAFYDTVP  IDG P                                   
Sbjct: 657 LSATVGLKNYDAFYDTVPTGIDGGPIYLIGDGNVTIDLSSNLWSYKVGLNGEMKQLYNPV 716

Query: 73  ------------------------------GNCPVALDMQEMG-NQTWVNGQSIGRFLPS 132
                                         G  PV LDMQ MG  Q WVNGQSIGRF PS
Sbjct: 717 FSQRTNWREINQKSIGRRMTWYKTSFKTPPGTDPVTLDMQGMGKGQAWVNGQSIGRFWPS 776

Query: 133 FISRNDGCSWTCDYRGAYDSSNCVKNCGSPSQRWYHVPRSFLSNDTNTLILFKEIGRSPQ 162
           FI+ ND CS TCDYRGAY+ S CV+NCG+PSQRWYH+PRSFLS+DTNTLILF+EIG +PQ
Sbjct: 777 FIAGNDSCSTTCDYRGAYNPSKCVENCGNPSQRWYHIPRSFLSDDTNTLILFEEIGGNPQ 836

[Close]

BLAST of CmoCh03G001770 vs. NCBI nr
Match: TYK10239.1 (beta-galactosidase 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 213.8 bits (543), Expect = 1.1e-51
Identity = 114/214 (53.27%), Postives = 126/214 (58.88%), Query Frame = 0


Query: 13  MESLVRLKNYDAFYDTVPIEIDGDPF---------------------------------- 72
           + + V LKNYDAFYDTVP  IDG P                                   
Sbjct: 496 LSATVGLKNYDAFYDTVPTGIDGGPIYLIGDGNVTIDLSSNLWSYKVGLNGEMKQLYNPV 555

Query: 73  ------------------------------GNCPVALDMQEMG-NQTWVNGQSIGRFLPS 132
                                         G  PV LDMQ MG  Q WVNGQSIGRF PS
Sbjct: 556 FSQRTNWREINQKSIGRRMTWYKTSFKTPPGTDPVTLDMQGMGKGQAWVNGQSIGRFWPS 615

Query: 133 FISRNDGCSWTCDYRGAYDSSNCVKNCGSPSQRWYHVPRSFLSNDTNTLILFKEIGRSPQ 162
           FI+ ND CS TCDYRGAY+ S CV+NCG+PSQRWYH+PRSFLS+DTNTLILF+EIG +PQ
Sbjct: 616 FIAGNDSCSTTCDYRGAYNPSKCVENCGNPSQRWYHIPRSFLSDDTNTLILFEEIGGNPQ 675

[Close]

BLAST of CmoCh03G001770 vs. NCBI nr
Match: KAA0050887.1 (beta-galactosidase 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 213.4 bits (542), Expect = 1.5e-51
Identity = 113/214 (52.80%), Postives = 126/214 (58.88%), Query Frame = 0


Query: 13  MESLVRLKNYDAFYDTVPIEIDGDPF---------------------------------- 72
           + + V LKNYDAFYDTVP  IDG P                                   
Sbjct: 496 LSATVGLKNYDAFYDTVPTGIDGGPIYLIGDGNVTIDLSSNLWSYKVGLNGEMKQLYNPV 555

Query: 73  ------------------------------GNCPVALDMQEMG-NQTWVNGQSIGRFLPS 132
                                         G  PV LDMQ MG  Q WVNGQSIGRF PS
Sbjct: 556 FSQRTNWRAINQKSIGRRMTWYKTSFKTPPGTDPVTLDMQGMGKGQAWVNGQSIGRFWPS 615

Query: 133 FISRNDGCSWTCDYRGAYDSSNCVKNCGSPSQRWYHVPRSFLSNDTNTLILFKEIGRSPQ 162
           FI+ ND CS TCDYRGAY+ S CV+NCG+PSQRWYH+PRSFLS+DTNTL+LF+EIG +PQ
Sbjct: 616 FIAGNDSCSTTCDYRGAYNPSKCVENCGNPSQRWYHIPRSFLSDDTNTLVLFEEIGGNPQ 675

[Close]

BLAST of CmoCh03G001770 vs. NCBI nr
Match: XP_031741737.1 (beta-galactosidase 15-like [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 1.6e-50
Identity = 113/214 (52.80%), Postives = 125/214 (58.41%), Query Frame = 0


Query: 13  MESLVRLKNYDAFYDTVPIEIDGDPF---------------------------------- 72
           + + V LKNYDAFYD VP  IDG P                                   
Sbjct: 538 LSATVGLKNYDAFYDMVPTGIDGGPIYLIGDGNVTTDLSSNLWSYKVGLNGEMKQIYNPM 597

Query: 73  ------------------------------GNCPVALDMQEMG-NQTWVNGQSIGRFLPS 132
                                         G  PV LDMQ MG  Q WVNGQSIGRF PS
Sbjct: 598 FSQRTNWIPLNQKSIGRRMTWYKTSFKTPAGIDPVVLDMQGMGKGQAWVNGQSIGRFWPS 657

Query: 133 FISRNDGCSWTCDYRGAYDSSNCVKNCGSPSQRWYHVPRSFLSNDTNTLILFKEIGRSPQ 162
           FI+ ND CS TCDYRGAY+ S CV+NCG+PSQRWYHVPRSFLS+DTNTLILF+EIG +PQ
Sbjct: 658 FIAGNDSCSATCDYRGAYNPSKCVENCGNPSQRWYHVPRSFLSSDTNTLILFEEIGGNPQ 717

[Close]

BLAST of CmoCh03G001770 vs. NCBI nr
Match: XP_031737963.1 (beta-galactosidase 15-like [Cucumis sativus] >XP_031737965.1 beta-galactosidase 15-like [Cucumis sativus] >XP_031737966.1 beta-galactosidase 15-like [Cucumis sativus] >MBC9846026.1 hypothetical protein [Adiantum capillus-veneris])

HSP 1 Score: 209.9 bits (533), Expect = 1.6e-50
Identity = 113/214 (52.80%), Postives = 125/214 (58.41%), Query Frame = 0


Query: 13  MESLVRLKNYDAFYDTVPIEIDGDPF---------------------------------- 72
           + + V LKNYDAFYD VP  IDG P                                   
Sbjct: 538 LSATVGLKNYDAFYDMVPTGIDGGPIYLIGDGNVTTDLSSNLWSYKVGLNGEMKQIYNPM 597

Query: 73  ------------------------------GNCPVALDMQEMG-NQTWVNGQSIGRFLPS 132
                                         G  PV LDMQ MG  Q WVNGQSIGRF PS
Sbjct: 598 FSQRTNWIPLNQKSIGRRMTWYKTSFKTPAGIDPVVLDMQGMGKGQAWVNGQSIGRFWPS 657

Query: 133 FISRNDGCSWTCDYRGAYDSSNCVKNCGSPSQRWYHVPRSFLSNDTNTLILFKEIGRSPQ 162
           FI+ ND CS TCDYRGAY+ S CV+NCG+PSQRWYHVPRSFLS+DTNTLILF+EIG +PQ
Sbjct: 658 FIAGNDSCSATCDYRGAYNPSKCVENCGNPSQRWYHVPRSFLSSDTNTLILFEEIGGNPQ 717

[Close]

BLAST of CmoCh03G001770 vs. TAIR 10
Match: AT5G20710.1 (beta-galactosidase 7 )

HSP 1 Score: 136.3 bits (342), Expect = 2.1e-32
Identity = 61/118 (51.69%), Postives = 81/118 (68.64%), Query Frame = 0


Query: 37  PFGNCPVALDMQEMG-NQTWVNGQSIGRFLPSFISRNDGCSWTCDYRGAYDSSNCVKNCG 96
           P G  PV +D+  +G  + W+NGQSIGR+ PSF S +DGC   CDYRGAY S  C   CG
Sbjct: 632 PLGKEPVIVDLNGLGKGEAWINGQSIGRYWPSFNSSDDGCKDECDYRGAYGSDKCAFMCG 691

Query: 97  SPSQRWYHVPRSFL-SNDTNTLILFKEIGRSPQQVTVQTITIGTICGNANEGSTFELS 153
            P+QRWYHVPRSFL ++  NT+ LF+E+G +P  V  +T+ +GT+C  A+E +  ELS
Sbjct: 692 KPTQRWYHVPRSFLNASGHNTITLFEEMGGNPSMVNFKTVVVGTVCARAHEHNKVELS 749

[Close]

BLAST of CmoCh03G001770 vs. TAIR 10
Match: AT2G32810.1 (beta galactosidase 9 )

HSP 1 Score: 126.7 bits (317), Expect = 1.7e-29
Identity = 57/110 (51.82%), Postives = 77/110 (70.00%), Query Frame = 0


Query: 37  PFGNCPVALDMQEMG-NQTWVNGQSIGRFLPSFISRNDGCSWTCDYRGAYDSSNCVKNCG 96
           P G  PV L+++ MG  Q WVNGQ IGR+  + IS+ DGC  TCDYRGAY+S  C  NCG
Sbjct: 661 PAGTDPVVLNLESMGRGQAWVNGQHIGRYW-NIISQKDGCDRTCDYRGAYNSDKCTTNCG 720

Query: 97  SPSQRWYHVPRSFLSNDTNTLILFKEIGRSPQQVTVQTITIGTICGNANE 146
            P+Q  YHVPRS+L   +N L+LF+E G +P +++V+T+T G +CG  +E
Sbjct: 721 KPTQTRYHVPRSWLKPSSNLLVLFEETGGNPFKISVKTVTAGILCGQVSE 769

[Close]

BLAST of CmoCh03G001770 vs. TAIR 10
Match: AT2G32810.2 (beta galactosidase 9 )

HSP 1 Score: 126.7 bits (317), Expect = 1.7e-29
Identity = 57/110 (51.82%), Postives = 77/110 (70.00%), Query Frame = 0


Query: 37  PFGNCPVALDMQEMG-NQTWVNGQSIGRFLPSFISRNDGCSWTCDYRGAYDSSNCVKNCG 96
           P G  PV L+++ MG  Q WVNGQ IGR+  + IS+ DGC  TCDYRGAY+S  C  NCG
Sbjct: 661 PAGTDPVVLNLESMGRGQAWVNGQHIGRYW-NIISQKDGCDRTCDYRGAYNSDKCTTNCG 720

Query: 97  SPSQRWYHVPRSFLSNDTNTLILFKEIGRSPQQVTVQTITIGTICGNANE 146
            P+Q  YHVPRS+L   +N L+LF+E G +P +++V+T+T G +CG  +E
Sbjct: 721 KPTQTRYHVPRSWLKPSSNLLVLFEETGGNPFKISVKTVTAGILCGQVSE 769

[Close]

BLAST of CmoCh03G001770 vs. TAIR 10
Match: AT2G28470.1 (beta-galactosidase 8 )

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-25
Identity = 52/103 (50.49%), Postives = 70/103 (67.96%), Query Frame = 0


Query: 37  PFGNCPVALDMQEMGNQ-TWVNGQSIGRFLPSFISRNDGCSWTCDYRGAYDSSNCVKNCG 96
           P G+ PVA+D    G    WVNGQSIGR+ P+ I+ N GC+ +CDYRG+Y ++ C+KNCG
Sbjct: 637 PSGSEPVAIDFTGTGKGIAWVNGQSIGRYWPTSIAGNGGCTESCDYRGSYRANKCLKNCG 696

Query: 97  SPSQRWYHVPRSFLSNDTNTLILFKEIGRSPQQVTVQTITIGT 139
            PSQ  YHVPRS+L    N L+LF+E+G  P Q++  T   G+
Sbjct: 697 KPSQTLYHVPRSWLKPSGNILVLFEEMGGDPTQISFATKQTGS 739

[Close]

BLAST of CmoCh03G001770 vs. TAIR 10
Match: AT2G28470.2 (beta-galactosidase 8 )

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-25
Identity = 52/103 (50.49%), Postives = 70/103 (67.96%), Query Frame = 0


Query: 37  PFGNCPVALDMQEMGNQ-TWVNGQSIGRFLPSFISRNDGCSWTCDYRGAYDSSNCVKNCG 96
           P G+ PVA+D    G    WVNGQSIGR+ P+ I+ N GC+ +CDYRG+Y ++ C+KNCG
Sbjct: 631 PSGSEPVAIDFTGTGKGIAWVNGQSIGRYWPTSIAGNGGCTESCDYRGSYRANKCLKNCG 690

Query: 97  SPSQRWYHVPRSFLSNDTNTLILFKEIGRSPQQVTVQTITIGT 139
            PSQ  YHVPRS+L    N L+LF+E+G  P Q++  T   G+
Sbjct: 691 KPSQTLYHVPRSWLKPSGNILVLFEEMGGDPTQISFATKQTGS 733

The following BLAST results are available for this feature:

BLAST of CmoCh03G001770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCV5	3.0e-31	51.69	Beta-galactosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BGAL7 PE=2 SV=2	[more]
P49676	3.6e-29	49.15	Beta-galactosidase OS=Brassica oleracea OX=3712 PE=2 SV=1	[more]
Q9SCV3	2.4e-28	51.82	Beta-galactosidase 9 OS=Arabidopsis thaliana OX=3702 GN=BGAL9 PE=2 SV=1	[more]
Q10NX8	1.4e-25	47.27	Beta-galactosidase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0255100 PE...	[more]
Q8W0A1	3.2e-25	44.80	Beta-galactosidase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0580200 PE...	[more]

BLAST of CmoCh03G001770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRM6	7.6e-54	63.33	Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_5G169120 PE=3 SV=1	[more]
A0A5D3CJ19	5.4e-52	53.27	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00...	[more]
A0A1S3BQ87	5.4e-52	53.27	Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103492519 PE=3 SV=1	[more]
A0A5A7U918	7.1e-52	52.80	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold761G0...	[more]
A0A0A0M006	7.8e-51	52.80	Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_1G650110 PE=3 SV=1	[more]

BLAST of CmoCh03G001770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451143.1	1.1e-51	53.27	PREDICTED: beta-galactosidase 15-like [Cucumis melo]	[more]
TYK10239.1	1.1e-51	53.27	beta-galactosidase 15-like [Cucumis melo var. makuwa]	[more]
KAA0050887.1	1.5e-51	52.80	beta-galactosidase 15-like [Cucumis melo var. makuwa]	[more]
XP_031741737.1	1.6e-50	52.80	beta-galactosidase 15-like [Cucumis sativus]	[more]
XP_031737963.1	1.6e-50	52.80	beta-galactosidase 15-like [Cucumis sativus] >XP_031737965.1 beta-galactosidase ...	[more]

BLAST of CmoCh03G001770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20710.1	2.1e-32	51.69	beta-galactosidase 7	[more]
AT2G32810.1	1.7e-29	51.82	beta galactosidase 9	[more]
AT2G32810.2	1.7e-29	51.82	beta galactosidase 9	[more]
AT2G28470.1	1.1e-25	50.49	beta-galactosidase 8	[more]
AT2G28470.2	1.1e-25	50.49	beta-galactosidase 8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 159..162
None	No IPR available	PANTHER	PTHR23421:SF156	PUTATIVE-RELATED	coord: 37..160
IPR001944	Glycoside hydrolase, family 35	PANTHER	PTHR23421	BETA-GALACTOSIDASE RELATED	coord: 37..160
IPR008979	Galactose-binding-like domain superfamily	SUPERFAMILY	49785	Galactose-binding domain-like	coord: 25..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G001770.1	CmoCh03G001770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds