CmoCh03G001580 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh03G001580
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionAdenylate kinase
LocationCmo_Chr03: 2196464 .. 2199506 (-)
RNA-Seq ExpressionCmoCh03G001580
SyntenyCmoCh03G001580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGCACCGAACACGACCTATGACTGCACTTCTTGTATTTACTGGGCTCAATGTTGTGCTAGTATCAACCATCACTCCAGTCTATGATTTCATATGCTTTCATCCATATTGGGAAAGAAGGGTATTTTCCAAAATCACTTGCAAGTTATTTGCATTGTTTTTTTGCTCGTGTATACAAGCTTGTTATACTTATGATAAATATGCATTGTTCTGTGTTTGGTGGCTATTCTCATTGCCATAGTTACTCTGTTTAGCCTTAAAAGTTGCAATGGAGAGGGATTGTTTAGTTTCTAGTTGAGAGATCTGGTGGAGGCTATCACTTGTTAGAGAATGTTATAGCTGTGGGACTGGATTTTTAATCTGAATATGTACGGTTGAGCACTCGGAGAGGGGGGGGGGGGGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGAATATTTTGAGGAAACTTGAAGAACAATTATGCCCCACAATCCCACATTGGTTGGGGAGGAGAACGAAACACCCTTTGTAAAGGTGTGGAAACCTTCCCTTAGCAGACGCGTTTTAAAAACCTTGAGGGGAAGCCCGACGCCGGGCCATGTGCAAGTGAGGAGGTTGTTCCCCGAAACGGGGTAGACACGAGGCGGTGTGTTAGTAAAGACGTTGGGCCCCGAAGGGGGTGGATTTAGTGAGGTCCCACATCGATTGGAGAAAGGAACGAGTGCCAGCGAGGACGCTGGGCCCTGAAGGGGGATGGGTTGTGAGATCCCACAATCCCACATTGGTTGGGGAGGAGAATGAAACACCCTTTATAAGGGTGTAGAAACCTTCCCCTAGCAGACGTATTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCTCAAAAAGGACAATATGTGCTAGCGGTGGGCTTGGACCGTTACACATATTGTGAGATCCCACATCAATTGGGAAGAAGAACGATTGTGAGATCCCATATCAATTGGGAAGAAGAACGATTGTGAGATCCCATATTGGTTGCAGGGAAAAACGAAGCATTTTTTATAAGGGTGTGGAAACCTCTCCGTAGCAGACGTATTTTAAGTTGATAGGGCCATTGTGTTGCATTTTTTATAAAAGAACAACGAAGGATCTTGATCATACTCTTTTAGTTTTGTGGGTAGGTCATGTTTTACCTTTCCTGAGGTTGAAGATTTGGTCTCCTACTTCATTTGTTGAACTCAAAAACAAAAAATAAGATTCATCAAGGAACATTAAAGGCATTAAATTAAAGATGTAGGCTGCTTGAATTAAAGAGAGAGATTAAGATTATAGGCTTTAATGGACAGACTACTGTTAATACCCAATAGTAGGAGTTGGACCAACAAAATCTTTTTAAGAGGAATAAGAGGAAGATGGAGGAGGAACGTGAATCAGTATCGAAGAAGGGAACATTTTCCTTTATAGTTAATATCGAGCCATAGTAAGGAGGGATAACATTGAAGAAGGGAACATTTTCCACCGCTCGATGTCTGGCTTAGATACTATTTGTAACAACCCAAGCCCACCACTAAAAGATATTGTCCTCTTTGGACTTTCCCTTCCGGGCTTCCCCTCAAGGTTTTAAAACGCGTCAACTAAGGAGAGATTTCCACATTCTTATAAGAAATACTTCATTCCCCTCTCCAACCGATGTGGGATCTCACGGATCTCCTTCCGCTTGTTCTTATTTTTCGTGAAAATGAACTAGTACTCATCAAGAACATACTGAAAGGAAAACAAGAAAGAGTGGCAATGCAATCATGCTTTTATCTAACTTATTGCTATAAAACAACGTAAAACTGTCCTGAAAACAGTATTCTTTCTGGATTTCTTTGTGTTCTAACCATCCTGTTTCTTCCAACATTCCTGAGTATGTAAGTAAGCTGGCTTTGCTGCTATTTTGTATTACACTTACCTAGCCATCTGCTTAGACAGCACGTTCATGAGTTTTTTGCTTGACATCCACAAACATGTTTATAACAAGAACATTTATTATTGTCAGATCAAAACTTCAAAAAAAGACATCTCTGTTATTTTGTGATAGATGTTCTTATATTCTGGCTGCAGAGAGAACAGTGTCGACAGCAACTCGAAGCTGCGATCGGGAAGAGCATTTAGCATACAGACGAGCATCTGCATTGCATCTAAGTTCCCCATACTGTGATCTTTGTAGGTGAGATTTTCTCTTATCCTTTCAATCATTCAAGAAATGAAGATAAGAATGGGATAAGAAAGCCCTTTGGTTGCCAACTGCAGGATTTATTGTCCACTGATTGCAGAATTGGACCATTAGATTCACAAGCTGTCATGATTGATATGTCATAA

mRNA sequence

ATGCCGCACCGAACACGACCTATGACTGCACTTCTTGTATTTACTGGGCTCAATGTTGTGCTAGTATCAACCATCACTCCAGTCTATGATTTCATATGCTTTCATCCATATTGGGAAAGAAGGTATTCTTTCTGGATTTCTTTGTGTTCTAACCATCCTGTTTCTTCCAACATTCCTGAGTATGTAAAGAGAACAGTGTCGACAGCAACTCGAAGCTGCGATCGGGAAGAGCATTTAGCATACAGACGAGCATCTGCATTGCATCTAAGTTCCCCATACTGTGATCTTTGTAGAATTGGACCATTAGATTCACAAGCTGTCATGATTGATATGTCATAA

Coding sequence (CDS)

ATGCCGCACCGAACACGACCTATGACTGCACTTCTTGTATTTACTGGGCTCAATGTTGTGCTAGTATCAACCATCACTCCAGTCTATGATTTCATATGCTTTCATCCATATTGGGAAAGAAGGTATTCTTTCTGGATTTCTTTGTGTTCTAACCATCCTGTTTCTTCCAACATTCCTGAGTATGTAAAGAGAACAGTGTCGACAGCAACTCGAAGCTGCGATCGGGAAGAGCATTTAGCATACAGACGAGCATCTGCATTGCATCTAAGTTCCCCATACTGTGATCTTTGTAGAATTGGACCATTAGATTCACAAGCTGTCATGATTGATATGTCATAA

Protein sequence

MPHRTRPMTALLVFTGLNVVLVSTITPVYDFICFHPYWERRYSFWISLCSNHPVSSNIPEYVKRTVSTATRSCDREEHLAYRRASALHLSSPYCDLCRIGPLDSQAVMIDMS
Homology
[Close]
BLAST of CmoCh03G001580 vs. ExPASy TrEMBL
Match: A0A6J1HS71 (uncharacterized protein LOC111466268 OS=Cucurbita maxima OX=3661 GN=LOC111466268 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 6.3e-15
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFICFHPYWERR 42
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDF+CFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]
BLAST of CmoCh03G001580 vs. ExPASy TrEMBL
Match: A0A6J1EUP9 (uncharacterized protein LOC111438118 OS=Cucurbita moschata OX=3662 GN=LOC111438118 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 6.3e-15
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFICFHPYWERR 42
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDF+CFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]
BLAST of CmoCh03G001580 vs. ExPASy TrEMBL
Match: A0A6J1DM83 (uncharacterized protein LOC111021335 OS=Momordica charantia OX=3673 GN=LOC111021335 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 6.3e-15
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFICFHPYWERR 42
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDF+CFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]
BLAST of CmoCh03G001580 vs. ExPASy TrEMBL
Match: A0A6P3YS46 (uncharacterized protein LOC107403960 OS=Ziziphus jujuba OX=326968 GN=LOC107403960 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 8.2e-15
Identity = 39/41 (95.12%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFICFHPYWERR 42
          MPHRTRPMTALLVFTGLNV+LVSTITPVYDF+CFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVILVSTITPVYDFVCFHPYWERR 41

[Close]
BLAST of CmoCh03G001580 vs. ExPASy TrEMBL
Match: A0A540K6U7 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_044519 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.1e-14
Identity = 41/48 (85.42%), Postives = 44/48 (91.67%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFICFHPYWERRYSFWISL 49
          MPHRTRPMTALLVFTGLN+VLVSTITPVYDF+CF PYWERR SF + L
Sbjct: 1  MPHRTRPMTALLVFTGLNIVLVSTITPVYDFVCFLPYWERRVSFHLLL 48

[Close]
BLAST of CmoCh03G001580 vs. NCBI nr
Match: KAG7033591.1 (hypothetical protein SDJN02_03315 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 90.5 bits (223), Expect = 9.9e-15
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFICFHPYWERR 42
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDFICFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFICFHPYWERR 41

[Close]
BLAST of CmoCh03G001580 vs. NCBI nr
Match: XP_031740521.1 (uncharacterized protein LOC101220293 [Cucumis sativus] >XP_031740522.1 uncharacterized protein LOC101220293 [Cucumis sativus] >KAE8649679.1 hypothetical protein Csa_012121 [Cucumis sativus])

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-14
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFICFHPYWERR 42
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDF+CFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]
BLAST of CmoCh03G001580 vs. NCBI nr
Match: XP_038882345.1 (uncharacterized protein LOC120073600 [Benincasa hispida])

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-14
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFICFHPYWERR 42
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDF+CFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]
BLAST of CmoCh03G001580 vs. NCBI nr
Match: XP_022153946.1 (uncharacterized protein LOC111021335 [Momordica charantia])

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-14
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFICFHPYWERR 42
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDF+CFHPYWERR
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERR 41

[Close]
BLAST of CmoCh03G001580 vs. NCBI nr
Match: KAG7027425.1 (hypothetical protein SDJN02_11438 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-14
Identity = 42/48 (87.50%), Postives = 44/48 (91.67%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFICFHPYWERRYSFWISL 49
          MPHRTRPMTALLVFTGLNVVLVSTITPVYDF+CFHPYWERR    +SL
Sbjct: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRDICKVSL 48

[Close]
BLAST of CmoCh03G001580 vs. TAIR 10
Match: AT5G09225.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 75.5 bits (184), Expect = 3.1e-14
Identity = 32/41 (78.05%), Postives = 36/41 (87.80%), Query Frame = 0 

Query: 1  MPHRTRPMTALLVFTGLNVVLVSTITPVYDFICFHPYWERR 42
          MPHRTRP+  LL+FTG+N VLV TITPVYDF+CF PYWERR
Sbjct: 1  MPHRTRPLKGLLLFTGINFVLVQTITPVYDFVCFLPYWERR 41

The following BLAST results are available for this feature:
BLAST of CmoCh03G001580 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh03G001580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HS716.3e-1597.56uncharacterized protein LOC111466268 OS=Cucurbita maxima OX=3661 GN=LOC111466268... [more]
A0A6J1EUP96.3e-1597.56uncharacterized protein LOC111438118 OS=Cucurbita moschata OX=3662 GN=LOC1114381... [more]
A0A6J1DM836.3e-1597.56uncharacterized protein LOC111021335 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A6P3YS468.2e-1595.12uncharacterized protein LOC107403960 OS=Ziziphus jujuba OX=326968 GN=LOC10740396... [more]
A0A540K6U71.1e-1485.42Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_044519 PE=4 SV=1[more]
BLAST of CmoCh03G001580 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7033591.19.9e-15100.00hypothetical protein SDJN02_03315 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_031740521.11.3e-1497.56uncharacterized protein LOC101220293 [Cucumis sativus] >XP_031740522.1 uncharact... [more]
XP_038882345.11.3e-1497.56uncharacterized protein LOC120073600 [Benincasa hispida][more]
XP_022153946.11.3e-1497.56uncharacterized protein LOC111021335 [Momordica charantia][more]
KAG7027425.11.3e-1487.50hypothetical protein SDJN02_11438 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of CmoCh03G001580 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G09225.13.1e-1478.05unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36392TRANSMEMBRANE PROTEINcoord: 1..76

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh03G001580.1CmoCh03G001580.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane