CmoCh03G001510 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACATAATCACAGACATCTTTTGCTTCTCAAATTTCTTCGATTCAAAGTTACATATCAATCAATCAATCCATAATATCCTTTACGATTAGTTTATAATTCTCAGTACTCACTACGATACTTGCTCGATCCAAGTTCTTGTCCTTCACCGGATGCGATCTATTAGCATCCCTGTTTGCGCCGAAGATTACAATCTCTCTTCCACTCTGCAATTTCCATGGCGATTCACAAGACCCAGAAGGCAAAACCCAAACCCAGATCCCCATTCCTCTTCTTCTTCGTTGCCCTCGCCGTCATTGCGTTTCTTTTCCTATTTTCCTCTCTGATTTCCACTATTGGGGTTTCTTCTTCTTTTCCATCATCAAATTCGATTCGTGAAATCTTCAGATTCAAGAATTTGAACCAGAAACAGAGACGTAATCGGCACGTTTTTAGTACGAACGACAAGTTCTTGTACTGGGGCAACAGAATCGACTGTCCTGGGAAGCATTGCGAGTCTTGCGAGGGTTTGGGTCACCAGGAGTCCAGCTTGAGGTGCGCCCTTGAGGAAGCCATGTTCCTCCAGAGGTAATTTTCATGAAGTTTTTCTGATTTCTGGGGCTTAATCTTTACATGAACATGTTTTCTCCTAGTTTAATTTGGTGGATTGGCATGTTAGGATTTCTGTGTGAAAGGGGTTTGGAATTGGATTAGCAGTAACTCATCAGCACTGTAGTGGTTCTATCATCACTAAACGTAGAATTATCCGTTGAGGATGGTTGGGAGGGAGTCACACGTTGGCTAATACATCTCTAGATGAAAGCCATGTGGACAATAGCATACCATTGTGGAGATACTTGGTATCAGAGTCATGCCTTTAACTTAACCATGTCAATAGAATCCTCAAATGTCGAACCAAGAAGTTGTGAGCCTTAATTAAGGGGAGGTTGTTCGAGGACTCTATAGGCCTCAAGGGAGGCTCTATGGTGTACTTCGTTCGAGGGGAGGACTGTGGAGATTCGTGATTCCTAACATTATCATATCTTGAAACTCACGAGTTCAAGAACTTCTGTTGGCCCCTTGCTTGATCTTTATGCTGTGTTATTGGTATGAGGTGCCATTTAGTTTGTCTCAGCTCTTTGTAATGGTAATGGATTGGTCCAACGCCGTTAAGTTCAGCATAATTTATTGGTAGAATGCTTTTGCATAACCTACTTAGACAATTTACTTTACTTTCTTTTTGGTGCAGAGTATTTGTAATGCCCTCTAGAATGTGTATCAACCCTATACACAATAAGAAAGGGATTCTTCATCACTCCACCAATGCAAGCTCAGAGGAAAGGTGCTTCTTCCTCTTTTCTAATCCTATAATGAGTTATACTTGATGATAGTTGAAACGGGTATTCAATTGATTCGCTTCATGCTTCAAACTAAGACGCGAACTCCCTTGGATAAAGATCTTTGTTCTTCATGTGTTTGTGATCTTTTCTAGAAAGAACACAGAATCTGAATTTGTTCTCTGCATTGCAGATGGGAAACAAACTCTTGTGCCATGGATTCGTTGTACGATATGGATCTTATATCTGATACCGTACCGGTGATTTTAGACAACTCAAAATTATGGTATCAGGTGCAGTCAACTGGTATGAAATTAGGATCTAGAGTGGTTGCCCATGTTGATCAAGTTAGTCGTATTGAACTCAGAGACGACAGCCGCTACTCCAATCTTTTGATAATAAATCGAACTGCCAGCCCTCTTTCATGGTAAATCAAACTTGGGGTAATAAGATTCTTTTATGTCTTTTGTATGTGTCTGTGAGATCCCATATCGGTGGGAGAGAGGAACGAAACATTCCTTATAAGAGTGTAGAAACCTCTCCCTAGCAGACGAGTTTTAAAACGTTGAAGGGAATCCCAGAAGGGAAAACCCAAAGAGGACAATATCTACTAGCGGTGGGATTGGGCTGTTACAAATGTTATCAGAGCCAACCGGGCGGTGTGCCAGCGAGGACGTTGGTCCTCCAAGGGGGGTGGATTGCGAGATCCCACATCGGTTGGAGAGGGGAACAAAACATTCCTTATAAGAGTGTAGAAATCTTTCCCTAGCAGACACGTTTTAAAATATTGAGGGGAAGCCCAGAAGGAAAAACCCAAAGAGGACACTATCTACTAACGGTGAGCTTGGGCTGTTACAAATAGTATCAGAACCAGACACCAGACAGTATGCCACCGGGCGGTAAAAGCTCAATTAGGCTCGTCTTTTTAATGTTTTGTTTTCATGCATTTCTTTGCAACTTGGTACGACGGATATTTCAATTTAAGATCCCAATTTATGAATGATTAGGGCGTTAATGCCGTGATAACTCTTTAGGTTTATGGAATGCAAGGACAGAAACAACCGCAGTGCCATATTGTTGCCCTATAAATTTCTTCCTTCTATGGCAGCAGAAAACTTGAGGGATGCATCTGAGAAGGTATTTTTTTGAAACCATATTAGGTTCTTTCTTTTGTTATTCATATTTGCAGTCTTCTACGAATCATGACATACGGTAGAGCCTATCGCTGTTAGCTCGCTGCTTACGAAACCTAGCTTTCGTGCATTTCTTTATTTCTACGTTGCTGTTGAATAGTTGTAGTAGATGCTCAACTTCCGTGTTATAAGATTAGGCATTTGCTTTATTTGGTTTTCCTGGATGCTTCTTAGCATAAACTCACCCTCTTAGAAAATATAATTACTGAACTCTTGATCGACCGAAAAGACTTCACTTTAGATACCCTGACACGAATAACGAACCCTAATTTAAAGACTCACGAGGGAAGTAGGCATAATTTTTAGAAACAAGAAACTAAAAACATAATGGTTACCTATTGAGGCCTAATTTTCCTCTCCTAGGATGACCCTAGCCAGTTCCCTTGCCGGGCTTGGAGGTTTGATTGAAAGTAGCGCTCGAGGATTGTAATTGGAAATGGAAGCTCGGTTCCCCTCGCACTCTCACTCTATTTTGAATTAGGGATTTGCCTCTTTCTTTCTCTACCGCCTGTGTCTATCTCCTGTCAGACTTTCCACCCGTAGGATCGCTTCTAAGTCCAATATCCAAAGTACTTGGAAATTCGTCTTTTTCCGTCTTTGATGAACTTTGAAGTTTTGTCATCAGGCCATGGTTGTATAATGGTGAAAGGCAGAAGAACATAGAAGGGCTTGTATGCAAACATTTGCAGAAGCAAGCCAGTTGTAACCATTATTTATGGATAGGTTTGTAGAAAATCTTGGAAGTACCTGAAACTTTATGGTTTTGGTGCCTTGGAAACTGTACAGAAGGCACATTTCTTTATTTCATAGGAAAATTCGATAAATCCGAAGCGAGTAATTAGCTACAGTGAGTGGTTGGTAAGCCTTGTATTAGCTCGAGACCGAGTTTGTTTGCAGTTCTCTGTTTCTGTTTGGGTTACTTATATGTTATACTGTGTGTAATAGCTGTGAGAAAAGATTACAAGTTGTTTCTCATTCATTTTGGAATATAGTTCTATAAGTAATACTGAAAAGAATGTCTGATCAATAGATTAAAGAGCTACTCGGTGATTACGACGCCATCCATGTTCGTCGTGGAGATAAAATAAAGACCAGAAAGGACAGGTTTGGTGTTGATAGAAGCTTACATCCACATCTCGACAGGGATACACGGCCTGAGTTTATGCTAAAGAGAATAGCAAAGTGGGTTCCGCCAGGGCGGACACTTTTTATTGCTTCAAATGAGAGAATGCCGGGGTTCTTCTCGCCCCTCTCTGCTCGGTGAGTCCATCTCACTTAACGTTTTAGTTCGCTCGAGTTAGCTGAAATGTTGGTTCTTTGCCATTTAGTAGTACGAAGACTTGGTTCAAAAGATCGATCTTCTTGTGTTCCGATAGCGATATTATAAATCATTGAACTGTCTCTCATATAGTCCTACCACCACCTTGATTCATGATACCCCAATTCTTCTGCAGGTACAAGTTGGCTTATTCCTCGAACTATAGCCATATTCTGGGTCCTGTGGTTAAGAACAATTATCAGTTGTTCATGATCGAAAGGCTCATTATGGCGGGTGCCAAGACATTCATCAGAACGTTCAAAGAAGACAATACAGATCTTAGCCTCACCGATGACCCAAAGAAGAACACGAAAGTGTGGCAAAAACCAATCTACACAGATGACGAAGAAAGTAGCTGAGGATTTGTTATTTCACTGGGAAAACATCTTGAAGACATCTTTTTGATCCATGCTAATGCCAACCAACAAAAGCCTTTCATTGCTCGTTGTAAAGCTTCGTATGAATGAATGGTAATAGGAAAGGTAGATTCTTGGCCGATGTTGTTGTATATGTGGTATAAATTATGATCCTGGTTTCTGAATTTCATTACTTCCATTTCTTTAGTGTCACGTGTATTCTTTTTTTTTTGAATGGAATACATCTTTCGTTACTTGAAATTTTTTGATGTAGCGTGTAATAACTCTAGTTGTTCGTTGTTCAAAGATTCTTGTTTAGAATTA ACATAATCACAGACATCTTTTGCTTCTCAAATTTCTTCGATTCAAAGTTACATATCAATCAATCAATCCATAATATCCTTTACGATTAGTTTATAATTCTCAGTACTCACTACGATACTTGCTCGATCCAAGTTCTTGTCCTTCACCGGATGCGATCTATTAGCATCCCTGTTTGCGCCGAAGATTACAATCTCTCTTCCACTCTGCAATTTCCATGGCGATTCACAAGACCCAGAAGGCAAAACCCAAACCCAGATCCCCATTCCTCTTCTTCTTCGTTGCCCTCGCCGTCATTGCGTTTCTTTTCCTATTTTCCTCTCTGATTTCCACTATTGGGGTTTCTTCTTCTTTTCCATCATCAAATTCGATTCGTGAAATCTTCAGATTCAAGAATTTGAACCAGAAACAGAGACGTAATCGGCACGTTTTTAGTACGAACGACAAGTTCTTGTACTGGGGCAACAGAATCGACTGTCCTGGGAAGCATTGCGAGTCTTGCGAGGGTTTGGGTCACCAGGAGTCCAGCTTGAGGTGCGCCCTTGAGGAAGCCATGTTCCTCCAGAGAGTATTTGTAATGCCCTCTAGAATGTGTATCAACCCTATACACAATAAGAAAGGGATTCTTCATCACTCCACCAATGCAAGCTCAGAGGAAAGATGGGAAACAAACTCTTGTGCCATGGATTCGTTGTACGATATGGATCTTATATCTGATACCGTACCGGTGATTTTAGACAACTCAAAATTATGGTATCAGGTGCAGTCAACTGGTATGAAATTAGGATCTAGAGTGGTTGCCCATGTTGATCAAGTTAGTCGTATTGAACTCAGAGACGACAGCCGCTACTCCAATCTTTTGATAATAAATCGAACTGCCAGCCCTCTTTCATGGTTTATGGAATGCAAGGACAGAAACAACCGCAGTGCCATATTGTTGCCCTATAAATTTCTTCCTTCTATGGCAGCAGAAAACTTGAGGGATGCATCTGAGAAGATTAAAGAGCTACTCGGTGATTACGACGCCATCCATGTTCGTCGTGGAGATAAAATAAAGACCAGAAAGGACAGGTTTGGTGTTGATAGAAGCTTACATCCACATCTCGACAGGGATACACGGCCTGAGTTTATGCTAAAGAGAATAGCAAAGTGGGTTCCGCCAGGGCGGACACTTTTTATTGCTTCAAATGAGAGAATGCCGGGGTTCTTCTCGCCCCTCTCTGCTCGGTACAAGTTGGCTTATTCCTCGAACTATAGCCATATTCTGGGTCCTGTGGTTAAGAACAATTATCAGTTGTTCATGATCGAAAGGCTCATTATGGCGGGTGCCAAGACATTCATCAGAACGTTCAAAGAAGACAATACAGATCTTAGCCTCACCGATGACCCAAAGAAGAACACGAAAGTGTGGCAAAAACCAATCTACACAGATGACGAAGAAAGTAGCTGAGGATTTGTTATTTCACTGGGAAAACATCTTGAAGACATCTTTTTGATCCATGCTAATGCCAACCAACAAAAGCCTTTCATTGCTCGTTGTAAAGCTTCGTATGAATGAATGGTAATAGGAAAGGTAGATTCTTGGCCGATGTTGTTGTATATGTGGTATAAATTATGATCCTGGTTTCTGAATTTCATTACTTCCATTTCTTTAGTGTCACGTGTATTCTTTTTTTTTTGAATGGAATACATCTTTCGTTACTTGAAATTTTTTGATGTAGCGTGTAATAACTCTAGTTGTTCGTTGTTCAAAGATTCTTGTTTAGAATTA ATGGCGATTCACAAGACCCAGAAGGCAAAACCCAAACCCAGATCCCCATTCCTCTTCTTCTTCGTTGCCCTCGCCGTCATTGCGTTTCTTTTCCTATTTTCCTCTCTGATTTCCACTATTGGGGTTTCTTCTTCTTTTCCATCATCAAATTCGATTCGTGAAATCTTCAGATTCAAGAATTTGAACCAGAAACAGAGACGTAATCGGCACGTTTTTAGTACGAACGACAAGTTCTTGTACTGGGGCAACAGAATCGACTGTCCTGGGAAGCATTGCGAGTCTTGCGAGGGTTTGGGTCACCAGGAGTCCAGCTTGAGGTGCGCCCTTGAGGAAGCCATGTTCCTCCAGAGAGTATTTGTAATGCCCTCTAGAATGTGTATCAACCCTATACACAATAAGAAAGGGATTCTTCATCACTCCACCAATGCAAGCTCAGAGGAAAGATGGGAAACAAACTCTTGTGCCATGGATTCGTTGTACGATATGGATCTTATATCTGATACCGTACCGGTGATTTTAGACAACTCAAAATTATGGTATCAGGTGCAGTCAACTGGTATGAAATTAGGATCTAGAGTGGTTGCCCATGTTGATCAAGTTAGTCGTATTGAACTCAGAGACGACAGCCGCTACTCCAATCTTTTGATAATAAATCGAACTGCCAGCCCTCTTTCATGGTTTATGGAATGCAAGGACAGAAACAACCGCAGTGCCATATTGTTGCCCTATAAATTTCTTCCTTCTATGGCAGCAGAAAACTTGAGGGATGCATCTGAGAAGATTAAAGAGCTACTCGGTGATTACGACGCCATCCATGTTCGTCGTGGAGATAAAATAAAGACCAGAAAGGACAGGTTTGGTGTTGATAGAAGCTTACATCCACATCTCGACAGGGATACACGGCCTGAGTTTATGCTAAAGAGAATAGCAAAGTGGGTTCCGCCAGGGCGGACACTTTTTATTGCTTCAAATGAGAGAATGCCGGGGTTCTTCTCGCCCCTCTCTGCTCGGTACAAGTTGGCTTATTCCTCGAACTATAGCCATATTCTGGGTCCTGTGGTTAAGAACAATTATCAGTTGTTCATGATCGAAAGGCTCATTATGGCGGGTGCCAAGACATTCATCAGAACGTTCAAAGAAGACAATACAGATCTTAGCCTCACCGATGACCCAAAGAAGAACACGAAAGTGTGGCAAAAACCAATCTACACAGATGACGAAGAAAGTAGCTGA MAIHKTQKAKPKPRSPFLFFFVALAVIAFLFLFSSLISTIGVSSSFPSSNSIREIFRFKNLNQKQRRNRHVFSTNDKFLYWGNRIDCPGKHCESCEGLGHQESSLRCALEEAMFLQRVFVMPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQVSRIELRDDSRYSNLLIINRTASPLSWFMECKDRNNRSAILLPYKFLPSMAAENLRDASEKIKELLGDYDAIHVRRGDKIKTRKDRFGVDRSLHPHLDRDTRPEFMLKRIAKWVPPGRTLFIASNERMPGFFSPLSARYKLAYSSNYSHILGPVVKNNYQLFMIERLIMAGAKTFIRTFKEDNTDLSLTDDPKKNTKVWQKPIYTDDEESS Homology
BLAST of CmoCh03G001510 vs. ExPASy TrEMBL
Match: A0A6J1EY95 (uncharacterized protein LOC111439414 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439414 PE=4 SV=1) HSP 1 Score: 827.8 bits (2137), Expect = 2.0e-236 Identity = 410/410 (100.00%), Postives = 410/410 (100.00%), Query Frame = 0
BLAST of CmoCh03G001510 vs. ExPASy TrEMBL
Match: A0A6J1HRU4 (O-fucosyltransferase family protein OS=Cucurbita maxima OX=3661 GN=LOC111467213 PE=3 SV=1) HSP 1 Score: 814.3 bits (2102), Expect = 2.3e-232 Identity = 404/410 (98.54%), Postives = 406/410 (99.02%), Query Frame = 0
BLAST of CmoCh03G001510 vs. ExPASy TrEMBL
Match: A0A6J1DKB9 (O-fucosyltransferase family protein OS=Momordica charantia OX=3673 GN=LOC111021332 PE=3 SV=1) HSP 1 Score: 740.7 bits (1911), Expect = 3.2e-210 Identity = 363/411 (88.32%), Postives = 385/411 (93.67%), Query Frame = 0
BLAST of CmoCh03G001510 vs. ExPASy TrEMBL
Match: A0A5D3DWC1 (O-fucosyltransferase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold749G00060 PE=3 SV=1) HSP 1 Score: 736.1 bits (1899), Expect = 8.0e-209 Identity = 364/407 (89.43%), Postives = 380/407 (93.37%), Query Frame = 0
BLAST of CmoCh03G001510 vs. ExPASy TrEMBL
Match: A0A1S3C1H9 (O-fucosyltransferase family protein OS=Cucumis melo OX=3656 GN=LOC103495824 PE=3 SV=1) HSP 1 Score: 736.1 bits (1899), Expect = 8.0e-209 Identity = 364/407 (89.43%), Postives = 380/407 (93.37%), Query Frame = 0
BLAST of CmoCh03G001510 vs. NCBI nr
Match: XP_022932889.1 (uncharacterized protein LOC111439414 isoform X1 [Cucurbita moschata]) HSP 1 Score: 827.8 bits (2137), Expect = 4.1e-236 Identity = 410/410 (100.00%), Postives = 410/410 (100.00%), Query Frame = 0
BLAST of CmoCh03G001510 vs. NCBI nr
Match: KAG7033584.1 (hypothetical protein SDJN02_03308 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 815.1 bits (2104), Expect = 2.8e-232 Identity = 406/411 (98.78%), Postives = 408/411 (99.27%), Query Frame = 0
BLAST of CmoCh03G001510 vs. NCBI nr
Match: XP_022967807.1 (uncharacterized protein LOC111467213 isoform X1 [Cucurbita maxima]) HSP 1 Score: 814.3 bits (2102), Expect = 4.7e-232 Identity = 404/410 (98.54%), Postives = 406/410 (99.02%), Query Frame = 0
BLAST of CmoCh03G001510 vs. NCBI nr
Match: XP_023545162.1 (uncharacterized protein LOC111804548 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 809.3 bits (2089), Expect = 1.5e-230 Identity = 403/411 (98.05%), Postives = 406/411 (98.78%), Query Frame = 0
BLAST of CmoCh03G001510 vs. NCBI nr
Match: XP_022153942.1 (uncharacterized protein LOC111021332 [Momordica charantia]) HSP 1 Score: 740.7 bits (1911), Expect = 6.7e-210 Identity = 363/411 (88.32%), Postives = 385/411 (93.67%), Query Frame = 0
BLAST of CmoCh03G001510 vs. TAIR 10
Match: AT3G56750.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41150.2); Has 128 Blast hits to 128 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). ) HSP 1 Score: 520.8 bits (1340), Expect = 1.0e-147 Identity = 264/403 (65.51%), Postives = 317/403 (78.66%), Query Frame = 0
BLAST of CmoCh03G001510 vs. TAIR 10
Match: AT2G41150.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56750.1); Has 127 Blast hits to 127 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 514.6 bits (1324), Expect = 7.2e-146 Identity = 261/403 (64.76%), Postives = 312/403 (77.42%), Query Frame = 0
BLAST of CmoCh03G001510 vs. TAIR 10
Match: AT2G41150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56750.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 301.2 bits (770), Expect = 1.3e-81 Identity = 156/260 (60.00%), Postives = 191/260 (73.46%), Query Frame = 0
BLAST of CmoCh03G001510 vs. TAIR 10
Match: AT4G08810.1 (calcium ion binding ) HSP 1 Score: 90.1 bits (222), Expect = 4.4e-18 Identity = 79/329 (24.01%), Postives = 139/329 (42.25%), Query Frame = 0
BLAST of CmoCh03G001510 vs. TAIR 10
Match: AT2G04280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12700.1); Has 130 Blast hits to 130 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 87.0 bits (214), Expect = 3.7e-17 Identity = 78/333 (23.42%), Postives = 136/333 (40.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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