CmoCh03G001380 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGTGTTCTGGTCGAGAATCAGTTGAAGAAACTGAAGCTTATTCAAGCTGATCTTAACCGAATCAACAAGTTCCCTGTCAAAACCATTCAGGTCTGTAACCCTAGTTTAATCTCCTCTGTTTTGGAGCTTGATGGTTATGCTTTTATTTGGGTGCAGATTCCGGATGGCGACTTTATAGATTGTGTTGAAACTCATCTGCAGCTAGCTTTTGATCATCCATTTTTCAAAGGAAAGAAACCATTGGTAAGTTCAAGGAATCTGTGGCTAAATTTTCGAAATGGGTTTTGTTTTTAACTGTGGAAATGTTGTTTCAGGGTCCGCCGGAGAGACCGTATAACCAGAGCCATTTCGGTGAGGTGGAGACAGAAATGTTCCAATTATGGAGCATGTCTGGAGAATTCTGCCCAGAGGGGACAGTTCCGGTTAGAAGAACGACGGAAAAGGATATGTTGAGAGCGAGTTCAGTTCAGAGATTTGGAAGAAAAGTAAGAAGAGACTCTCTTGGCAAAGGCCATGAGGTTAGTCTTTAA GGTGTTCTGGTCGAGAATCAGTTGAAGAAACTGAAGCTTATTCAAGCTGATCTTAACCGAATCAACAAGTTCCCTGTCAAAACCATTCAGGTCTGTAACCCTAGTTTAATCTCCTCTGTTTTGGAGCTTGATGGTTATGCTTTTATTTGGGTGCAGATTCCGGATGGCGACTTTATAGATTGTGTTGAAACTCATCTGCAGCTAGCTTTTGATCATCCATTTTTCAAAGGAAAGAAACCATTGGGTCCGCCGGAGAGACCGTATAACCAGAGCCATTTCGGTGAGGTGGAGACAGAAATGTTCCAATTATGGAGCATGTCTGGAGAATTCTGCCCAGAGGGGACAGTTCCGGTTAGAAGAACGACGGAAAAGGATATGTTGAGAGCGAGTTCAGTTCAGAGATTTGGAAGAAAAGTAAGAAGAGACTCTCTTGGCAAAGGCCATGAGGTTAGTCTTTAA GGTGTTCTGGTCGAGAATCAGTTGAAGAAACTGAAGCTTATTCAAGCTGATCTTAACCGAATCAACAAGTTCCCTGTCAAAACCATTCAGGTCTGTAACCCTAGTTTAATCTCCTCTGTTTTGGAGCTTGATGGTTATGCTTTTATTTGGGTGCAGATTCCGGATGGCGACTTTATAGATTGTGTTGAAACTCATCTGCAGCTAGCTTTTGATCATCCATTTTTCAAAGGAAAGAAACCATTGGGTCCGCCGGAGAGACCGTATAACCAGAGCCATTTCGGTGAGGTGGAGACAGAAATGTTCCAATTATGGAGCATGTCTGGAGAATTCTGCCCAGAGGGGACAGTTCCGGTTAGAAGAACGACGGAAAAGGATATGTTGAGAGCGAGTTCAGTTCAGAGATTTGGAAGAAAAGTAAGAAGAGACTCTCTTGGCAAAGGCCATGAGGTTAGTCTTTAA GVLVENQLKKLKLIQADLNRINKFPVKTIQVCNPSLISSVLELDGYAFIWVQIPDGDFIDCVETHLQLAFDHPFFKGKKPLGPPERPYNQSHFGEVETEMFQLWSMSGEFCPEGTVPVRRTTEKDMLRASSVQRFGRKVRRDSLGKGHEVSL Homology
BLAST of CmoCh03G001380 vs. ExPASy TrEMBL
Match: A0A6J1EKJ1 (uncharacterized protein LOC111435506 OS=Cucurbita moschata OX=3662 GN=LOC111435506 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 3.8e-63 Identity = 125/152 (82.24%), Postives = 128/152 (84.21%), Query Frame = 0
BLAST of CmoCh03G001380 vs. ExPASy TrEMBL
Match: A0A6J1EPP2 (uncharacterized protein LOC111435507 OS=Cucurbita moschata OX=3662 GN=LOC111435507 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 3.0e-60 Identity = 121/152 (79.61%), Postives = 124/152 (81.58%), Query Frame = 0
BLAST of CmoCh03G001380 vs. ExPASy TrEMBL
Match: A0A6J1HUI2 (uncharacterized protein LOC111466317 OS=Cucurbita maxima OX=3661 GN=LOC111466317 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 1.3e-52 Identity = 108/148 (72.97%), Postives = 113/148 (76.35%), Query Frame = 0
BLAST of CmoCh03G001380 vs. ExPASy TrEMBL
Match: A0A6J1G1Q6 (uncharacterized protein LOC111449870 OS=Cucurbita moschata OX=3662 GN=LOC111449875 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 6.6e-52 Identity = 108/148 (72.97%), Postives = 112/148 (75.68%), Query Frame = 0
BLAST of CmoCh03G001380 vs. ExPASy TrEMBL
Match: A0A6J1G1R1 (uncharacterized protein LOC111449872 OS=Cucurbita moschata OX=3662 GN=LOC111449872 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 6.6e-52 Identity = 108/148 (72.97%), Postives = 112/148 (75.68%), Query Frame = 0
BLAST of CmoCh03G001380 vs. NCBI nr
Match: XP_022928657.1 (uncharacterized protein LOC111435506 [Cucurbita moschata]) HSP 1 Score: 250.8 bits (639), Expect = 7.8e-63 Identity = 125/152 (82.24%), Postives = 128/152 (84.21%), Query Frame = 0
BLAST of CmoCh03G001380 vs. NCBI nr
Match: XP_022928658.1 (uncharacterized protein LOC111435507 [Cucurbita moschata]) HSP 1 Score: 241.1 bits (614), Expect = 6.2e-60 Identity = 121/152 (79.61%), Postives = 124/152 (81.58%), Query Frame = 0
BLAST of CmoCh03G001380 vs. NCBI nr
Match: KAG6603290.1 (hypothetical protein SDJN03_03899, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 228.4 bits (581), Expect = 4.1e-56 Identity = 113/148 (76.35%), Postives = 119/148 (80.41%), Query Frame = 0
BLAST of CmoCh03G001380 vs. NCBI nr
Match: XP_023514474.1 (uncharacterized protein LOC111778730 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 221.9 bits (564), Expect = 3.9e-54 Identity = 111/148 (75.00%), Postives = 118/148 (79.73%), Query Frame = 0
BLAST of CmoCh03G001380 vs. NCBI nr
Match: XP_023536950.1 (uncharacterized protein LOC111798152 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 218.8 bits (556), Expect = 3.3e-53 Identity = 110/148 (74.32%), Postives = 114/148 (77.03%), Query Frame = 0
BLAST of CmoCh03G001380 vs. TAIR 10
Match: AT1G70550.2 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 140.2 bits (352), Expect = 1.4e-33 Identity = 78/148 (52.70%), Postives = 93/148 (62.84%), Query Frame = 0
BLAST of CmoCh03G001380 vs. TAIR 10
Match: AT1G70550.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 140.2 bits (352), Expect = 1.4e-33 Identity = 78/148 (52.70%), Postives = 93/148 (62.84%), Query Frame = 0
BLAST of CmoCh03G001380 vs. TAIR 10
Match: AT1G23340.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 134.0 bits (336), Expect = 9.9e-32 Identity = 72/148 (48.65%), Postives = 91/148 (61.49%), Query Frame = 0
BLAST of CmoCh03G001380 vs. TAIR 10
Match: AT1G23340.2 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 134.0 bits (336), Expect = 9.9e-32 Identity = 72/148 (48.65%), Postives = 91/148 (61.49%), Query Frame = 0
BLAST of CmoCh03G001380 vs. TAIR 10
Match: AT1G10750.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 128.3 bits (321), Expect = 5.4e-30 Identity = 70/147 (47.62%), Postives = 86/147 (58.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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