CmoCh03G000100 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh03G000100
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	VQ motif-containing protein
Location	Cmo_Chr03: 160419 .. 160908 (-)
RNA-Seq Expression	CmoCh03G000100
Synteny	CmoCh03G000100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGGGAGGCAGCCAAAGTCGTGTCGTGTGTACACCTTTGACAACGTTCATACAGACCGACACGACAACGTTTCGAGAGGTTGTACAACGTCTAACCGGGCCATCAGAAACCCACACGCCACCATCGAAAGCAGTTGGATCAAAGAGGTCAACTACGACCTCCAAACTCCATGAAAGGAGACACTTGACTAGACCAAAAGTTGCAAATTGTGAAACCATGTCCTTCCCATTTCAAGTCGGACGAGCATCCTAGCTACGTTACGAGCCCGGTCAGGACGCCTTCGAAGATCTTGTCAAAGCTGTTGATGGGGGAGGACGAGAAGGAGTCGAATAAGGTGGAAGAAGAGAAGGCAATCAAAGAAAGGGGATTCTATTTGCATCCATCTCTAAGGTCAAAGCTTGGCTATACTCAACCAGAGTTGCTTTCATTATTTCCTTTGGAATCTCCCAAACCAACTCAGCGCAATGAAACAAAAAAGAATTAA

mRNA sequence

ATGGAGAAGGGAGGCAGCCAAAGTCGTGTCGTGTGTACACCTTTGACAACGTTCATACAGACCGACACGACAACGTTTCGAGAGGTTGTACAACGTCTAACCGGGCCATCAGAAACCCACACGCCACCATCGAAAGCAGTTGGATCAAAGAGGTCAACTACGACCTCCAAACTCCATGAAAGGAGACACTTGACTAGACCAAAATCGGACGAGCATCCTAGCTACGTTACGAGCCCGGTCAGGACGCCTTCGAAGATCTTGTCAAAGCTGTTGATGGGGGAGGACGAGAAGGAGTCGAATAAGGTGGAAGAAGAGAAGGCAATCAAAGAAAGGGGATTCTATTTGCATCCATCTCTAAGGTCAAAGCTTGGCTATACTCAACCAGAGTTGCTTTCATTATTTCCTTTGGAATCTCCCAAACCAACTCAGCGCAATGAAACAAAAAAGAATTAA

Coding sequence (CDS)

ATGGAGAAGGGAGGCAGCCAAAGTCGTGTCGTGTGTACACCTTTGACAACGTTCATACAGACCGACACGACAACGTTTCGAGAGGTTGTACAACGTCTAACCGGGCCATCAGAAACCCACACGCCACCATCGAAAGCAGTTGGATCAAAGAGGTCAACTACGACCTCCAAACTCCATGAAAGGAGACACTTGACTAGACCAAAATCGGACGAGCATCCTAGCTACGTTACGAGCCCGGTCAGGACGCCTTCGAAGATCTTGTCAAAGCTGTTGATGGGGGAGGACGAGAAGGAGTCGAATAAGGTGGAAGAAGAGAAGGCAATCAAAGAAAGGGGATTCTATTTGCATCCATCTCTAAGGTCAAAGCTTGGCTATACTCAACCAGAGTTGCTTTCATTATTTCCTTTGGAATCTCCCAAACCAACTCAGCGCAATGAAACAAAAAAGAATTAA

Protein sequence

MEKGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHERRHLTRPKSDEHPSYVTSPVRTPSKILSKLLMGEDEKESNKVEEEKAIKERGFYLHPSLRSKLGYTQPELLSLFPLESPKPTQRNETKKN

Homology

[Close]

BLAST of CmoCh03G000100 vs. ExPASy Swiss-Prot
Match: Q9FNP0 (VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.2e-28
Identity = 80/164 (48.78%), Postives = 97/164 (59.15%), Query Frame = 0


Query: 3   KGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETH----TPPSKAVGSK-RSTTTSK 62
           KG       C P+TTF+QTDT TFRE+VQRLTGP+E +    TP +  + +  +   TSK
Sbjct: 4   KGSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPTSK 63

Query: 63  LHERRHLTRPK-------------------SDEHPSYVTSPVRTPSKILSKLLMGEDEKE 122
           LHERR   RPK                      + + +TSPV TPS + S L + E E +
Sbjct: 64  LHERRQCMRPKLEIVKPPLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGEPD 123

Query: 123 S---NKVEEEKAIKERGFYLHPSLRSKLGYTQPELLSLFPLESP 140
           S   N  EEEKAIKER FYLHPS RSK GYT+PELL+LFPL SP
Sbjct: 124 SCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSP 167

[Close]

BLAST of CmoCh03G000100 vs. ExPASy Swiss-Prot
Match: Q5M750 (VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.9e-09
Identity = 58/181 (32.04%), Postives = 86/181 (47.51%), Query Frame = 0


Query: 16  TTFIQTDTTTFREVVQRLTG------------PSETH-------------TPPSKAVGSK 75
           TTF+Q DT++F++VVQ LTG            P+ TH              PP KAV +K
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 76  RSTTTS----KLHERRHLTRPKSDEHPSYVTSPVRT-----------------PSKILSK 135
           + +++S    +L+ERR+  +       + V +PV +                 PS +LS 
Sbjct: 117 KQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSP 176

Query: 136 LL---------MGEDEKESNKV-EEEKAIKERGFYLHPSLRSKLGYTQPELLSLFPLESP 141
           +           G   +  N++  EEKA+KERGFYLHPS  +     +P LL LFP+ SP
Sbjct: 177 VTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTSP 236

[Close]

BLAST of CmoCh03G000100 vs. ExPASy Swiss-Prot
Match: O23660 (VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.6e-09
Identity = 54/165 (32.73%), Postives = 84/165 (50.91%), Query Frame = 0


Query: 16  TTFIQTDTTTFREVVQRLTG--PSETH-----------TPPSKAVGSKRSTTTSKLHERR 75
           TTFI+TD ++F++VVQ LTG   + TH            PP KAV +K+ +++ +L ERR
Sbjct: 36  TTFIRTDPSSFKQVVQLLTGIPKNPTHQPDPRFPPFHSIPPIKAVTNKKQSSSFRLSERR 95

Query: 76  HLTRPKSDEHPSYVTSP-VRTPSKILSKLL---------------------MGEDEKESN 135
           +  +   + +P++   P + TP+ +    L                        D K S 
Sbjct: 96  NSMKHYLNINPTHSGPPEILTPTILNFPALDLSPDTPLMSDPFYRPGSFSQSPSDSKPSF 155

Query: 136 KVEEEKAIKERGFYLHPSLRSKLGYTQPELLSLF---PLESPKPT 143
             ++E++IKE+GFYL PS  +    T+P LLSLF   P+ SP P+
Sbjct: 156 DDDQERSIKEKGFYLRPSPSTTPRDTEPRLLSLFPMTPIHSPAPS 200

[Close]

BLAST of CmoCh03G000100 vs. ExPASy Swiss-Prot
Match: Q9M8L3 (VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.7e-07
Identity = 54/162 (33.33%), Postives = 72/162 (44.44%), Query Frame = 0


Query: 14  PLTTFIQTDTTTFREVVQRLTG-PSETHTPPSKAVGSKR-------STTTSKLHERR--- 73
           P T F+Q D + FR +VQ+LTG P +  +    AV +              KLHERR   
Sbjct: 13  PNTMFVQADPSNFRNIVQKLTGAPPDISSSSFSAVSAAHQKLPLTPKKPAFKLHERRQSS 72

Query: 74  --------HLTRPK---SDEHPSYVTSPVRTPSKILSKL---LMGEDEKESNKVEEEKAI 133
                   ++T P    S  H  ++ SPV       +++      E+       EE+KAI
Sbjct: 73  KKMELKVNNITNPNDAFSHFHRGFLVSPVSHLDPFWARVSPHSAREEHHAQPDKEEQKAI 132

Query: 134 KERGFYLHPSLRSKLGYTQPELLSLFPLESPKPTQRNETKKN 151
            E+GFY  PS RS      PELL LFPL SP  T     + N
Sbjct: 133 AEKGFYFLPSPRSG-SEPAPELLPLFPLRSPNGTNHRIHEDN 173

[Close]

BLAST of CmoCh03G000100 vs. ExPASy Swiss-Prot
Match: Q9FHZ3 (VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.6e-05
Identity = 59/191 (30.89%), Postives = 80/191 (41.88%), Query Frame = 0


Query: 16  TTFIQTDTTTFREVVQRLTGPS------ETHTPPSK----------AVGSKRSTTTSKLH 75
           TTF+Q DT+TF++VVQ LTG S      + H  PS           ++   + T + KL+
Sbjct: 49  TTFVQADTSTFKQVVQMLTGSSTDTTTGKHHEAPSPVNNNNKGSSFSIPPIKKTNSFKLY 108

Query: 76  ERRH-------------------------LTRPKSDEHPSYVTSP---------VRTPSK 135
           ERR                           T   S  H S   SP         + +PS 
Sbjct: 109 ERRQNNNNMFAKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSSSENILLSPSM 168

Query: 136 I----------LSKLLMGED--EKES-----NKVEEEKAIKERGFYLHPSLRSKLGYTQP 140
           +          ++ L   +D   K S     N  EE+KAI ++GFYLHPS  S    +QP
Sbjct: 169 LDFPKLGLNSPVTPLRSNDDPFNKSSPLSLGNSSEEDKAIADKGFYLHPSPVSTPRDSQP 228

[Close]

BLAST of CmoCh03G000100 vs. ExPASy TrEMBL
Match: A0A6J1F404 (LOW QUALITY PROTEIN: VQ motif-containing protein 31-like OS=Cucurbita moschata OX=3662 GN=LOC111439876 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.0e-73
Identity = 150/162 (92.59%), Postives = 150/162 (92.59%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE
Sbjct: 1   MEKGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60

Query: 61  RRHLTRP------------KSDEHPSYVTSPVRTPSKILSKLLMGEDEKESNKVEEEKAI 120
           RRHLTRP            KSDEHPSYVTSPVRTPSKILSKLLMGEDEKESNKVEEEKAI
Sbjct: 61  RRHLTRPKLQIVKPCPSHFKSDEHPSYVTSPVRTPSKILSKLLMGEDEKESNKVEEEKAI 120

Query: 121 KERGFYLHPSLRSKLGYTQPELLSLFPLESPKPTQRNETKKN 151
           KERGFYLHPSLRSKLGYTQPELLSLFPLESPKPTQRNETKKN
Sbjct: 121 KERGFYLHPSLRSKLGYTQPELLSLFPLESPKPTQRNETKKN 162

[Close]

BLAST of CmoCh03G000100 vs. ExPASy TrEMBL
Match: A0A5A7TPA5 (VQ motif-containing protein 31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00210 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 7.5e-48
Identity = 115/166 (69.28%), Postives = 124/166 (74.70%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKGGSQS V C PLTTF+QTDT TFREVVQRLTGPSE+H   SK VGS+R TTTSKLHE
Sbjct: 1   MEKGGSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHMMSSKGVGSRRPTTTSKLHE 60

Query: 61  RRHL-TRPK--------------SDEHPSYVTSPVRTPSKILSKLLMGEDEKES-NKVEE 120
           RRHL TRPK              + EH SY+TSPV TPSKILSKL +G++EKE  N  EE
Sbjct: 61  RRHLITRPKLQIVKPCPSYFKATTSEHLSYITSPVGTPSKILSKLSIGDEEKEELNNKEE 120

Query: 121 EKAIKERGFYLHPSLRSKLGYTQPELLSLFPLESPKPTQRNETKKN 151
           EKAIKER FYLHPS RS   Y QPELLSLFPLESPK   +NETK N
Sbjct: 121 EKAIKERRFYLHPSPRSMAVYAQPELLSLFPLESPKNVSKNETKIN 166

[Close]

BLAST of CmoCh03G000100 vs. ExPASy TrEMBL
Match: A0A6J1D5K7 (VQ motif-containing protein 31 OS=Momordica charantia OX=3673 GN=LOC111017822 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 6.4e-47
Identity = 110/163 (67.48%), Postives = 121/163 (74.23%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETHTPPSKAVG-SKRSTTTSKLH 60
           MEK  +QS V C PLTTF+QTDTTTFREVVQRLTGPSE+HTPPSKA G SKR   TSKLH
Sbjct: 1   MEKAANQSLVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTPPSKAAGSSKRPIATSKLH 60

Query: 61  ERRHLTRPK------------------SDEHPSYVTSPVRTPSKILSKLLMGEDEKESNK 120
           ERRHLTRPK                  S EHPS  +SP+ TPSKILSKL +G+ EKE N 
Sbjct: 61  ERRHLTRPKLQIVKPAASHFFKPTSCISSEHPSCTSSPLGTPSKILSKLSIGDGEKELNA 120

Query: 121 VEEEKAIKERGFYLHPSLRSKLGYTQPELLSLFPLESPKPTQR 145
           +EEEKAIKER FYLHPS RS  GY QPELL+LFPLESPK +Q+
Sbjct: 121 MEEEKAIKERRFYLHPSPRSMPGYAQPELLTLFPLESPKTSQK 163

[Close]

BLAST of CmoCh03G000100 vs. ExPASy TrEMBL
Match: A0A0A0KZ05 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G448640 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 4.1e-46
Identity = 112/166 (67.47%), Postives = 122/166 (73.49%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKG SQS V C PLTTF+QTDT TFREVVQRLTGPSE+HT  SK  GS+R TTTSKLHE
Sbjct: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHE 60

Query: 61  RRHL-TRPKSD--------------EHPSYVTSPVRTPSKILSKLLMGEDEKES-NKVEE 120
           RR L TRPK                EHPSY+TSP+ TPSKILSKL +G++EKE  N +EE
Sbjct: 61  RRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSKILSKLSIGDEEKEELNNMEE 120

Query: 121 EKAIKERGFYLHPSLRSKLGYTQPELLSLFPLESPKPTQRNETKKN 151
           EKAIKER FYLHPS RS   Y QPELLSLFPLESPK    +ETK N
Sbjct: 121 EKAIKERRFYLHPSPRSMPIYAQPELLSLFPLESPKKVSNHETKIN 166

[Close]

BLAST of CmoCh03G000100 vs. ExPASy TrEMBL
Match: A0A6J1HN19 (VQ motif-containing protein 31 OS=Cucurbita maxima OX=3661 GN=LOC111466109 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 3.3e-43
Identity = 103/171 (60.23%), Postives = 120/171 (70.18%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETHT-PPSKAVGSKRSTTTSKLH 60
           MEK G+Q+ V C PLTTF+QTDTT FREVVQRLTGPSE++T P SKA GSKR T+TSKLH
Sbjct: 25  MEKPGTQTPVKCKPLTTFVQTDTTAFREVVQRLTGPSESYTLPSSKATGSKRPTSTSKLH 84

Query: 61  ERRHLTRPKSD-------------------------EHPSYVTSPVRTPSKILSKLLMGE 120
           ERRHLTRPK                           +HPS++TSPV TP KI+SKL +G+
Sbjct: 85  ERRHLTRPKLQIVKPSLSHFKPPSFITSPVGTPPRADHPSFITSPVGTPLKIMSKLSIGD 144

Query: 121 DEKESNKVEEEKAIKERGFYLHPSLRSKLGYTQPELLSLFPLESPKPTQRN 146
            EKE N +EEE+A +E+ FYLHPS RS  G  QPELLSLFPLESPK T +N
Sbjct: 145 GEKELNSIEEERATREKRFYLHPSPRSMHGSAQPELLSLFPLESPKKTSQN 195

[Close]

BLAST of CmoCh03G000100 vs. NCBI nr
Match: XP_022933110.1 (LOW QUALITY PROTEIN: VQ motif-containing protein 31-like [Cucurbita moschata])

HSP 1 Score: 284.3 bits (726), Expect = 6.3e-73
Identity = 150/162 (92.59%), Postives = 150/162 (92.59%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE
Sbjct: 1   MEKGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60

Query: 61  RRHLTRP------------KSDEHPSYVTSPVRTPSKILSKLLMGEDEKESNKVEEEKAI 120
           RRHLTRP            KSDEHPSYVTSPVRTPSKILSKLLMGEDEKESNKVEEEKAI
Sbjct: 61  RRHLTRPKLQIVKPCPSHFKSDEHPSYVTSPVRTPSKILSKLLMGEDEKESNKVEEEKAI 120

Query: 121 KERGFYLHPSLRSKLGYTQPELLSLFPLESPKPTQRNETKKN 151
           KERGFYLHPSLRSKLGYTQPELLSLFPLESPKPTQRNETKKN
Sbjct: 121 KERGFYLHPSLRSKLGYTQPELLSLFPLESPKPTQRNETKKN 162

[Close]

BLAST of CmoCh03G000100 vs. NCBI nr
Match: XP_038880928.1 (VQ motif-containing protein 31 [Benincasa hispida])

HSP 1 Score: 204.1 bits (518), Expect = 8.2e-49
Identity = 112/157 (71.34%), Postives = 122/157 (77.71%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKGGSQS V C PLTTF+QTDTTTFREVVQRLTGPSE+HT   KA GSKR TT SKLHE
Sbjct: 1   MEKGGSQSHVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTMQPKAFGSKRPTTASKLHE 60

Query: 61  RRHLTRPK-------------SDEHPSYVTSPVRTPSKILSKLLMGEDEKES-NKVEEEK 120
           RRHLTRPK             + EHPSY+TSPV TPSKILSKL +G++EK+  N +EEEK
Sbjct: 61  RRHLTRPKLQIVKPCPSHFKPTTEHPSYITSPVGTPSKILSKLSIGDEEKDQLNNMEEEK 120

Query: 121 AIKERGFYLHPSLRSKLGYTQPELLSLFPLESPKPTQ 144
           AIKER FYLHPS RS   Y QPELLSLFPLESPK +Q
Sbjct: 121 AIKERRFYLHPSPRSMPAYAQPELLSLFPLESPKTSQ 157

[Close]

BLAST of CmoCh03G000100 vs. NCBI nr
Match: KAA0045202.1 (VQ motif-containing protein 31 [Cucumis melo var. makuwa] >TYK27349.1 VQ motif-containing protein 31 [Cucumis melo var. makuwa])

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-47
Identity = 115/166 (69.28%), Postives = 124/166 (74.70%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKGGSQS V C PLTTF+QTDT TFREVVQRLTGPSE+H   SK VGS+R TTTSKLHE
Sbjct: 1   MEKGGSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHMMSSKGVGSRRPTTTSKLHE 60

Query: 61  RRHL-TRPK--------------SDEHPSYVTSPVRTPSKILSKLLMGEDEKES-NKVEE 120
           RRHL TRPK              + EH SY+TSPV TPSKILSKL +G++EKE  N  EE
Sbjct: 61  RRHLITRPKLQIVKPCPSYFKATTSEHLSYITSPVGTPSKILSKLSIGDEEKEELNNKEE 120

Query: 121 EKAIKERGFYLHPSLRSKLGYTQPELLSLFPLESPKPTQRNETKKN 151
           EKAIKER FYLHPS RS   Y QPELLSLFPLESPK   +NETK N
Sbjct: 121 EKAIKERRFYLHPSPRSMAVYAQPELLSLFPLESPKNVSKNETKIN 166

[Close]

BLAST of CmoCh03G000100 vs. NCBI nr
Match: XP_022149395.1 (VQ motif-containing protein 31 [Momordica charantia])

HSP 1 Score: 196.8 bits (499), Expect = 1.3e-46
Identity = 110/163 (67.48%), Postives = 121/163 (74.23%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETHTPPSKAVG-SKRSTTTSKLH 60
           MEK  +QS V C PLTTF+QTDTTTFREVVQRLTGPSE+HTPPSKA G SKR   TSKLH
Sbjct: 1   MEKAANQSLVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTPPSKAAGSSKRPIATSKLH 60

Query: 61  ERRHLTRPK------------------SDEHPSYVTSPVRTPSKILSKLLMGEDEKESNK 120
           ERRHLTRPK                  S EHPS  +SP+ TPSKILSKL +G+ EKE N 
Sbjct: 61  ERRHLTRPKLQIVKPAASHFFKPTSCISSEHPSCTSSPLGTPSKILSKLSIGDGEKELNA 120

Query: 121 VEEEKAIKERGFYLHPSLRSKLGYTQPELLSLFPLESPKPTQR 145
           +EEEKAIKER FYLHPS RS  GY QPELL+LFPLESPK +Q+
Sbjct: 121 MEEEKAIKERRFYLHPSPRSMPGYAQPELLTLFPLESPKTSQK 163

[Close]

BLAST of CmoCh03G000100 vs. NCBI nr
Match: XP_031740607.1 (VQ motif-containing protein 31-like [Cucumis sativus])

HSP 1 Score: 194.1 bits (492), Expect = 8.5e-46
Identity = 112/166 (67.47%), Postives = 122/166 (73.49%), Query Frame = 0


Query: 1   MEKGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKG SQS V C PLTTF+QTDT TFREVVQRLTGPSE+HT  SK  GS+R TTTSKLHE
Sbjct: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHE 60

Query: 61  RRHL-TRPKSD--------------EHPSYVTSPVRTPSKILSKLLMGEDEKES-NKVEE 120
           RR L TRPK                EHPSY+TSP+ TPSKILSKL +G++EKE  N +EE
Sbjct: 61  RRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSKILSKLSIGDEEKEELNNMEE 120

Query: 121 EKAIKERGFYLHPSLRSKLGYTQPELLSLFPLESPKPTQRNETKKN 151
           EKAIKER FYLHPS RS   Y QPELLSLFPLESPK    +ETK N
Sbjct: 121 EKAIKERRFYLHPSPRSMPIYAQPELLSLFPLESPKKVSNHETKIN 166

[Close]

BLAST of CmoCh03G000100 vs. TAIR 10
Match: AT5G08480.2 (VQ motif-containing protein )

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-29
Identity = 80/164 (48.78%), Postives = 97/164 (59.15%), Query Frame = 0


Query: 3   KGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETH----TPPSKAVGSK-RSTTTSK 62
           KG       C P+TTF+QTDT TFRE+VQRLTGP+E +    TP +  + +  +   TSK
Sbjct: 4   KGSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPTSK 63

Query: 63  LHERRHLTRPK-------------------SDEHPSYVTSPVRTPSKILSKLLMGEDEKE 122
           LHERR   RPK                      + + +TSPV TPS + S L + E E +
Sbjct: 64  LHERRQCMRPKLEIVKPPLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGEPD 123

Query: 123 S---NKVEEEKAIKERGFYLHPSLRSKLGYTQPELLSLFPLESP 140
           S   N  EEEKAIKER FYLHPS RSK GYT+PELL+LFPL SP
Sbjct: 124 SCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSP 167

[Close]

BLAST of CmoCh03G000100 vs. TAIR 10
Match: AT5G08480.1 (VQ motif-containing protein )

HSP 1 Score: 114.4 bits (285), Expect = 8.0e-26
Identity = 73/143 (51.05%), Postives = 88/143 (61.54%), Query Frame = 0


Query: 3   KGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETH----TPPSKAVGSK-RSTTTSK 62
           KG       C P+TTF+QTDT TFRE+VQRLTGP+E +    TP +  + +  +   TSK
Sbjct: 4   KGSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPTSK 63

Query: 63  LHERRHLTRPKSDEHPSYVTSPVRTPSKILSKLLMGE-DEKESNKVEEEKAIKERGFYLH 122
           LHERR   RPK +     +  P      +  K   GE D   +N  EEEKAIKER FYLH
Sbjct: 64  LHERRQCMRPKLE-----IVKP-----PLSFKPTEGEPDSCTTNIEEEEKAIKERRFYLH 123

Query: 123 PSLRSKLGYTQPELLSLFPLESP 140
           PS RSK GYT+PELL+LFPL SP
Sbjct: 124 PSPRSKPGYTEPELLTLFPLTSP 136

[Close]

BLAST of CmoCh03G000100 vs. TAIR 10
Match: AT1G28280.1 (VQ motif-containing protein )

HSP 1 Score: 62.8 bits (151), Expect = 2.8e-10
Identity = 58/181 (32.04%), Postives = 86/181 (47.51%), Query Frame = 0


Query: 16  TTFIQTDTTTFREVVQRLTG------------PSETH-------------TPPSKAVGSK 75
           TTF+Q DT++F++VVQ LTG            P+ TH              PP KAV +K
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 76  RSTTTS----KLHERRHLTRPKSDEHPSYVTSPVRT-----------------PSKILSK 135
           + +++S    +L+ERR+  +       + V +PV +                 PS +LS 
Sbjct: 117 KQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSP 176

Query: 136 LL---------MGEDEKESNKV-EEEKAIKERGFYLHPSLRSKLGYTQPELLSLFPLESP 141
           +           G   +  N++  EEKA+KERGFYLHPS  +     +P LL LFP+ SP
Sbjct: 177 VTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTSP 236

[Close]

BLAST of CmoCh03G000100 vs. TAIR 10
Match: AT1G28280.2 (VQ motif-containing protein )

HSP 1 Score: 62.8 bits (151), Expect = 2.8e-10
Identity = 58/181 (32.04%), Postives = 86/181 (47.51%), Query Frame = 0


Query: 16  TTFIQTDTTTFREVVQRLTG------------PSETH-------------TPPSKAVGSK 75
           TTF+Q DT++F++VVQ LTG            P+ TH              PP KAV +K
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 76  RSTTTS----KLHERRHLTRPKSDEHPSYVTSPVRT-----------------PSKILSK 135
           + +++S    +L+ERR+  +       + V +PV +                 PS +LS 
Sbjct: 117 KQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSP 176

Query: 136 LL---------MGEDEKESNKV-EEEKAIKERGFYLHPSLRSKLGYTQPELLSLFPLESP 141
           +           G   +  N++  EEKA+KERGFYLHPS  +     +P LL LFP+ SP
Sbjct: 177 VTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTSP 236

[Close]

BLAST of CmoCh03G000100 vs. TAIR 10
Match: AT2G33780.1 (VQ motif-containing protein )

HSP 1 Score: 61.6 bits (148), Expect = 6.1e-10
Identity = 54/165 (32.73%), Postives = 84/165 (50.91%), Query Frame = 0


Query: 16  TTFIQTDTTTFREVVQRLTG--PSETH-----------TPPSKAVGSKRSTTTSKLHERR 75
           TTFI+TD ++F++VVQ LTG   + TH            PP KAV +K+ +++ +L ERR
Sbjct: 36  TTFIRTDPSSFKQVVQLLTGIPKNPTHQPDPRFPPFHSIPPIKAVTNKKQSSSFRLSERR 95

Query: 76  HLTRPKSDEHPSYVTSP-VRTPSKILSKLL---------------------MGEDEKESN 135
           +  +   + +P++   P + TP+ +    L                        D K S 
Sbjct: 96  NSMKHYLNINPTHSGPPEILTPTILNFPALDLSPDTPLMSDPFYRPGSFSQSPSDSKPSF 155

Query: 136 KVEEEKAIKERGFYLHPSLRSKLGYTQPELLSLF---PLESPKPT 143
             ++E++IKE+GFYL PS  +    T+P LLSLF   P+ SP P+
Sbjct: 156 DDDQERSIKEKGFYLRPSPSTTPRDTEPRLLSLFPMTPIHSPAPS 200

The following BLAST results are available for this feature:

BLAST of CmoCh03G000100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNP0	2.2e-28	48.78	VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1	[more]
Q5M750	3.9e-09	32.04	VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1	[more]
O23660	8.6e-09	32.73	VQ motif-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=VQ13 PE=1 SV=1	[more]
Q9M8L3	4.7e-07	33.33	VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1	[more]
Q9FHZ3	2.6e-05	30.89	VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1	[more]

BLAST of CmoCh03G000100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F404	3.0e-73	92.59	LOW QUALITY PROTEIN: VQ motif-containing protein 31-like OS=Cucurbita moschata O...	[more]
A0A5A7TPA5	7.5e-48	69.28	VQ motif-containing protein 31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1D5K7	6.4e-47	67.48	VQ motif-containing protein 31 OS=Momordica charantia OX=3673 GN=LOC111017822 PE...	[more]
A0A0A0KZ05	4.1e-46	67.47	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G448640 PE=4 SV=...	[more]
A0A6J1HN19	3.3e-43	60.23	VQ motif-containing protein 31 OS=Cucurbita maxima OX=3661 GN=LOC111466109 PE=4 ...	[more]

BLAST of CmoCh03G000100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933110.1	6.3e-73	92.59	LOW QUALITY PROTEIN: VQ motif-containing protein 31-like [Cucurbita moschata]	[more]
XP_038880928.1	8.2e-49	71.34	VQ motif-containing protein 31 [Benincasa hispida]	[more]
KAA0045202.1	1.6e-47	69.28	VQ motif-containing protein 31 [Cucumis melo var. makuwa] >TYK27349.1 VQ motif-c...	[more]
XP_022149395.1	1.3e-46	67.48	VQ motif-containing protein 31 [Momordica charantia]	[more]
XP_031740607.1	8.5e-46	67.47	VQ motif-containing protein 31-like [Cucumis sativus]	[more]

BLAST of CmoCh03G000100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08480.2	1.6e-29	48.78	VQ motif-containing protein	[more]
AT5G08480.1	8.0e-26	51.05	VQ motif-containing protein	[more]
AT1G28280.1	2.8e-10	32.04	VQ motif-containing protein	[more]
AT1G28280.2	2.8e-10	32.04	VQ motif-containing protein	[more]
AT2G33780.1	6.1e-10	32.73	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 16..39 e-value: 3.8E-10 score: 39.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..70
None	No IPR available	PANTHER	PTHR33402:SF22	VQ MOTIF-CONTAINING PROTEIN 31	coord: 1..143
IPR039611	VQ motif-containing protein 4/11/13/19/31/33	PANTHER	PTHR33402	VQ MOTIF-CONTAINING PROTEIN 11-LIKE	coord: 1..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G000100.1	CmoCh03G000100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus