CmoCh02G018500 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGGTTGTAGCCTCAAGATTTCAGCCGCTTTTCTGACTTTGTTTGGCTTCTTCGCTATGGTGGTGAGCGTTCCAAACACGGGAGTCAAGTCAGTTTTGTGCAACTCAGGAATTTTCACGGGGGGCGATCCTTTTGCCGTGAGTCTGGATTACGTTCTAAAAGAATTGGAGAGTTCGACTCCCACTACAAACAATTATGATTTCTACAACATATCTCCTTATCCTAATTCCTTCGCTTACGGCCATGCTTCCTGCAACCAAAGCCTTACAACCTCAGACTGCACCACTTGTCTTGGCGCTGCTAAGACCAACATGTTGGGGTCGTGTCAAATGAGGATTGGTGCTCGTGCGGTGCTCAATGACTGTTCAATTAGGTACGAGCAAAACCCATTTGATGATTAG ATGGTTGGTTGTAGCCTCAAGATTTCAGCCGCTTTTCTGACTTTGTTTGGCTTCTTCGCTATGGTGGTGAGCGTTCCAAACACGGGAGTCAAGTCAGTTTTGTGCAACTCAGGAATTTTCACGGGGGGCGATCCTTTTGCCGTGAGTCTGGATTACGTTCTAAAAGAATTGGAGAGTTCGACTCCCACTACAAACAATTATGATTTCTACAACATATCTCCTTATCCTAATTCCTTCGCTTACGGCCATGCTTCCTGCAACCAAAGCCTTACAACCTCAGACTGCACCACTTGTCTTGGCGCTGCTAAGACCAACATGTTGGGGTCGTGTCAAATGAGGATTGGTGCTCGTGCGGTGCTCAATGACTGTTCAATTAGGTACGAGCAAAACCCATTTGATGATTAG ATGGTTGGTTGTAGCCTCAAGATTTCAGCCGCTTTTCTGACTTTGTTTGGCTTCTTCGCTATGGTGGTGAGCGTTCCAAACACGGGAGTCAAGTCAGTTTTGTGCAACTCAGGAATTTTCACGGGGGGCGATCCTTTTGCCGTGAGTCTGGATTACGTTCTAAAAGAATTGGAGAGTTCGACTCCCACTACAAACAATTATGATTTCTACAACATATCTCCTTATCCTAATTCCTTCGCTTACGGCCATGCTTCCTGCAACCAAAGCCTTACAACCTCAGACTGCACCACTTGTCTTGGCGCTGCTAAGACCAACATGTTGGGGTCGTGTCAAATGAGGATTGGTGCTCGTGCGGTGCTCAATGACTGTTCAATTAGGTACGAGCAAAACCCATTTGATGATTAG MVGCSLKISAAFLTLFGFFAMVVSVPNTGVKSVLCNSGIFTGGDPFAVSLDYVLKELESSTPTTNNYDFYNISPYPNSFAYGHASCNQSLTTSDCTTCLGAAKTNMLGSCQMRIGARAVLNDCSIRYEQNPFDD Homology
BLAST of CmoCh02G018500 vs. ExPASy Swiss-Prot
Match: D9IWE0 (Antifungal protein ginkbilobin-like protein OS=Pinus pinaster OX=71647 GN=EAP PE=2 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.0e-12 Identity = 45/110 (40.91%), Postives = 55/110 (50.00%), Query Frame = 0
BLAST of CmoCh02G018500 vs. ExPASy Swiss-Prot
Match: A4ZDL6 (Antifungal protein ginkbilobin-2 OS=Ginkgo biloba OX=3311 GN=GNK2 PE=1 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 2.8e-11 Identity = 44/133 (33.08%), Postives = 65/133 (48.87%), Query Frame = 0
BLAST of CmoCh02G018500 vs. ExPASy Swiss-Prot
Match: A9NQT1 (Antifungal protein ginkbilobin-like protein 1 OS=Picea sitchensis OX=3332 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 2.8e-11 Identity = 45/126 (35.71%), Postives = 58/126 (46.03%), Query Frame = 0
BLAST of CmoCh02G018500 vs. ExPASy Swiss-Prot
Match: Q3I3X0 (Antifungal protein ginkbilobin-like protein (Fragment) OS=Picea abies OX=3329 GN=EMB24 PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 2.8e-11 Identity = 41/109 (37.61%), Postives = 55/109 (50.46%), Query Frame = 0
BLAST of CmoCh02G018500 vs. ExPASy Swiss-Prot
Match: Q40849 (Antifungal protein ginkbilobin-like protein 1 OS=Picea glauca OX=3330 GN=EMB24 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 6.3e-11 Identity = 43/129 (33.33%), Postives = 62/129 (48.06%), Query Frame = 0
BLAST of CmoCh02G018500 vs. ExPASy TrEMBL
Match: A0A6J1ESI5 (antifungal protein ginkbilobin-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437337 PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 2.9e-59 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of CmoCh02G018500 vs. ExPASy TrEMBL
Match: A0A0A0KGA2 (Gnk2-homologous domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G409950 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 2.3e-56 Identity = 108/134 (80.60%), Postives = 118/134 (88.06%), Query Frame = 0
BLAST of CmoCh02G018500 vs. ExPASy TrEMBL
Match: A0A5D3CNH9 (Antifungal protein ginkbilobin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00580 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.9e-55 Identity = 107/134 (79.85%), Postives = 118/134 (88.06%), Query Frame = 0
BLAST of CmoCh02G018500 vs. ExPASy TrEMBL
Match: A0A5E4EE49 (PREDICTED: antifungal OS=Prunus dulcis OX=3755 GN=ALMOND_2B017312 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 4.1e-45 Identity = 90/130 (69.23%), Postives = 107/130 (82.31%), Query Frame = 0
BLAST of CmoCh02G018500 vs. ExPASy TrEMBL
Match: A0A251N2S2 (Gnk2-homologous domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_8G242500 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 9.1e-45 Identity = 89/128 (69.53%), Postives = 107/128 (83.59%), Query Frame = 0
BLAST of CmoCh02G018500 vs. TAIR 10
Match: AT3G60720.1 (plasmodesmata-located protein 8 ) HSP 1 Score: 41.2 bits (95), Expect = 7.7e-04 Identity = 35/129 (27.13%), Postives = 53/129 (41.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|