CmoCh02G017160 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh02G017160
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionethylene-responsive transcription factor-like protein isoform X1
LocationCmo_Chr02: 9823517 .. 9827546 (+)
RNA-Seq ExpressionCmoCh02G017160
SyntenyCmoCh02G017160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATAGAAGTCACGTTCTCTCTCTCATTAGTATTTCTCTCTCTAAAACCAATTTGATTCTCTCTGCCTCCATTGCAGACCACCACCTGGTTCTCGTCATCAGTCCAAACAGAACAAATTTACAAAACGAGGGATTTCAAAAAGGTGGTAGAGAAACAGATGATGCATGAGTTCAGAATTTGCGTATAATCCTTTCTCCTCGTAATCTCAACCCGCTTTTGTTTTTCGATCGTTTTTCTACGCCTCCTCCGCCGCCGCGACCTCAGGTATGAACGGTGGCTCTCTGTTTTTTGATCGGTTTTGTTTGGTCTCCGGTCGTCGACATTCGGCGTTGACGGGCGGAATCCGAATGCCGATCACTTGTTTGTTTGTTTGTTTTGGATTTTTGGTTTCTGAGTTAGCGTCTGTCTAGTGCTGCGTTTGTTTAGATTGGCGTTTTGAGGAATTTGGTATCTGAATTTCTTGTCGGCGGCTGGGTTGGCTTGTAGCGATGAGTTTGAGAATTTCCAGCACCGAATTTGATAGGTTTAGATTCTGAGTTGAAGTTTTAAGTTTAAACAAGTTGAGCTACGTTTGATTTGAATAGATTGGGAAGTTTGCTAATGGAGTTCACCAAATTTGTTTGGTTTTTTGCTCAATTCAAGGTTCTTTTGGCTGATAGCTACTAGTTTTGTACTGCAATTTACTGCTTTTTGGATGGTGATAGTTTATGTTGGCACTGCTTTTAGATTATTGATTCATAGAATGATACTTGAATTTTTCTGTAGTACCTCCTGTTGTGCATTTTGACTTCATTTAGATCGCTTCGGTTGAGAGAAAGTGAAGTTAAACACTGTTTTTTAGGTACAAAAGAAGAATATACTTCACTAAGATGTTTTCTTCTTCCTCTTTGATTTGTATTTGATAATATGAGAACTTTTGTTGTGAGATCCTACATTGGTACATTGGTTGGAGAGGAGAATGAAACATTCCTTATAAGGGTGTGGAAACCTCTCTGTAGCAAACGCGTTTTAAATCCGTGTGAGGCTGATAGCGATACGTAATGGGTTAAAGTAGTGGGCTTGGACTGTTATAAATGGTATCCAAGCCTGACACCGAGCGGTGTGCTAGCGAGGACGCTGGCCCTCAAGGAGGGTGGATTGTGAGATCCCACGTCGGTTGGAGAGGAGAACAAAACATTCTTTATAAGTATGTGGAAACCTCTCCCTAGCAACGCATTTTGAAACCGTGAGGTTGACGGTGATACGTAAGGGGCTAAAGCGGTGGGTTTGGGCTGTTACAAATGGTACAAAGTTGGACACCGAGTGGTGTGCTAGAGATTCCACATTGGTTGGATAGTGGAATGAAACATTCCTTATAAGAGTGTGGAAACCTCTCCCTAGCAACGCGTTTTAAAACCGTGAGGCTGACGGCAATATGTAAGGAGCTAAAGCGGTGAGCTTGGGCTATTACAAATGGTATCAAAGCCGGACACCGAGCAGTGTGCCAGTGAGGACACTGGCCTCCAAGGAGGGTGGATTGTGAGATCCTACATCGGTTGGAGAGTGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACTGTGAGGCTGACGGCGATACGTGACGGGCTAAAGCGGTGGGCTTGAGCTATTACAAATGGTATCAAAGCCTAACACCGAGTGGTGTGCCAGCGAGGATGCTAGGCCCCAAGGAGGGTAGATTGTGAGATCCTACATCAATTAGAGAAGCGAACGAAATATTCCGTATGAGTGTGTGGAAACCTCTCTCTAGTAGACGCGCTTCAAAACCATGAGGCTGACAGCGATACGTAATGGGCTAAAGCAGACAATATCTGCTAGCGGTGGGCTTGAACCGTTACATATGTTCATCCATTTGGTTTGAGTGCTCTTAAATGTATGAATCAACGTGAAAACAAGTCTTCCTTATTGATTGTTCTCAGCAACTTGCATTCTTTATCCCCATTATGATAGATGCCACGCTTCTGTTCTTTGAGCCTTATTGATCAGTTTGTTGTTTGTCCGTCGGTCCCAGTGTTTTGGAGATGTCTTTTTTCTTCTCATGGAACCTGATTGAATTTGTTCTACTTCTCTGCTCTAGATGTGAGGTGATCCAGGAAAAACAACCAAATAGTACCAGCGATAACGCGATCGAAGCTAATTATGGTGAGCTTAAGAAGGCGTAAACTCCTCGGACTTTGCACTGGTAATGTCTTGAAGCTATGGAGTTGAGAAAATGCCATTTCTATTCATTTGATTCATAACAGAACCACAGAAGGCTTCTTATACTCATCTTGTAGGCAAAGGCTCATTTGATGCTCCAGTTTCAAAGTCTTCTGAAAATTCGACTGCTGAAGATCTCGAGCACTGTACGAACTTCATTAGTGTTCATCCCATCTGTTCGAACGAATTCAACGAGATAGAGGAGGTCAGTATTATTATGATTTCCAGTTTCTTCAATCACTGCATAATCACATCATGTTTATGTCTTGTAGTGCATAACGAGTACATTTATGCTCGATACTCATCTTGATAATATGGCATTTTTCAGAATCCCGTTGCAAATTTAGAGACCGAATCGTCGAGGGTATCTGTTTTGGACACATCAAAGGAGAAAAGTGATGAGCCATTTGCAGGTGTGTTTGGTTTCATTTTTCACTGAGTTTTGAAGTGATATCTTTCTGTTCATATGCTTTTTATTTGCAGAACCGCCCGTAAAACGTAGAAAACGACACCGGAGAAAGCAGTTTCCAGAAGAATGTTTCTTAATGAGAGGTGTTTATTTCAAGAACATGAAATGGCAGGCTGCTATTAAGGTTGACAAGAAACAAATACACTTGGGAACTGTTGAATCACAAGAAGAAGCTGCTCATTTGTATGACAGGTACCATTTTGAAGTGCTAAAGTTCTAGCAGATTGATGAATATATTAATGGCATTTTGTCCCTAAGATATGTAACCACCCGAGCCCCATTGCTGAGTCTTTTTTGGGTTTTCCCTTCCGAACTTCCTCTCAAGGTTTTAAAACGTGTTTGCTAGGTCGAGGTTTCTGCACCTTCGTTTCCCTCACCATCCCATGTGGGATCTCACAATCCACCCTCTTTGGGGGCCAGCATTCTTGCTGGCACACCGCCTGGAACATATCTCTAATACTATTTGTAACCGCCCTAACCCACCACCAGTAGATATCGTCCTATTTGGGGTTTTCCTTCTAGACTTTCCCCCAAGATCTTAAAACGCGTCTGTTAGGGAGAGGTTTCCACGCCTCTGTTCCCCTCTTCACCAATATGAGATCTCACTCGACAGCTAGAAAATTGGTGCATTTTAACATTTTAATGCTTACAAAGGATTTTGCGCATATTATTCCTTCACTTTTCAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAATAGCCAAGGAGCTGATCATCAGTCTTTTGCTATTCTAGAGCTGCTTTCATGTGCGGAAGGGAACCCAACTTCGAGCTCCCAGAGGCGGAGAAGAAAGAACTGAGAAAGTTTAATTGGGACGAGTTCTTAGCAATGACTCGGCTCGCAATCGCTAATAAAAGTAAGTCTCTGTTTTCTTCAATTTGGTTAATGTTCATATGAAGATGATCTGAGTTATTTATCATCATATTCGCCAGAACAAAAGAGGGTCAGCCCAGAATCAAAGAACTCGAAACTTCCTATTGTAGGGAACGACGACTTGAACAAGAGACAGGATGAGTTCATTGACCTCTCAGCTCCAGAAGATATTGAGCCACTTGCCTTGAAATTTTGATGGAGATATGCAGTTTTGATTTCTTTTATTAAAAGGCCATTGAAATTTTGGAGCATTGGATGTACATCAGTTTAGTGATTTAGGCAAATCCTTCGGGCATTTCATGAACAATGATCTTGCAACAATTTAGACATGAACAAGTCAGGAATTTTAGTACATTCATAGTAAGAATGATAATTTACATGTATTGAGTTCAGCAAATCGCTACTAGTTCGAACACAAATCAG

mRNA sequence

CATAGAAGTCACGTTCTCTCTCTCATTAGTATTTCTCTCTCTAAAACCAATTTGATTCTCTCTGCCTCCATTGCAGACCACCACCTGGTTCTCGTCATCAGTCCAAACAGAACAAATTTACAAAACGAGGGATTTCAAAAAGGTGGTAGAGAAACAGATGATGCATGAGTTCAGAATTTGCGTATAATCCTTTCTCCTCGTAATCTCAACCCGCTTTTGTTTTTCGATCGTTTTTCTACGCCTCCTCCGCCGCCGCGACCTCAGATGTGAGGTGATCCAGGAAAAACAACCAAATAGTACCAGCGATAACGCGATCGAAGCTAATTATGGTGAGCTTAAGAAGGCGTAAACTCCTCGGACTTTGCACTGGCAAAGGCTCATTTGATGCTCCAGTTTCAAAGTCTTCTGAAAATTCGACTGCTGAAGATCTCGAGCACTGTACGAACTTCATTAGTGTTCATCCCATCTGTTCGAACGAATTCAACGAGATAGAGGAGAATCCCGTTGCAAATTTAGAGACCGAATCGTCGAGGGTATCTGTTTTGGACACATCAAAGGAGAAAAGTGATGAGCCATTTGCAGAACCGCCCGTAAAACGTAGAAAACGACACCGGAGAAAGCAGTTTCCAGAAGAATGTTTCTTAATGAGAGGTGTTTATTTCAAGAACATGAAATGGCAGGCTGCTATTAAGGTTGACAAGAAACAAATACACTTGGGAACTGTTGAATCACAAGAAGAAGCTGCTCATTTGTATGACAGAGCTGCTTTCATGTGCGGAAGGGAACCCAACTTCGAGCTCCCAGAGGCGGAGAAGAAAGAACTGAGAAAGTTTAATTGGGACGAGTTCTTAGCAATGACTCGGCTCGCAATCGCTAATAAAAAACAAAAGAGGGTCAGCCCAGAATCAAAGAACTCGAAACTTCCTATTGTAGGGAACGACGACTTGAACAAGAGACAGGATGAGTTCATTGACCTCTCAGCTCCAGAAGATATTGAGCCACTTGCCTTGAAATTTTGATGGAGATATGCAGTTTTGATTTCTTTTATTAAAAGGCCATTGAAATTTTGGAGCATTGGATGTACATCAGTTTAGTGATTTAGGCAAATCCTTCGGGCATTTCATGAACAATGATCTTGCAACAATTTAGACATGAACAAGTCAGGAATTTTAGTACATTCATAGTAAGAATGATAATTTACATGTATTGAGTTCAGCAAATCGCTACTAGTTCGAACACAAATCAG

Coding sequence (CDS)

ATGGTGAGCTTAAGAAGGCGTAAACTCCTCGGACTTTGCACTGGCAAAGGCTCATTTGATGCTCCAGTTTCAAAGTCTTCTGAAAATTCGACTGCTGAAGATCTCGAGCACTGTACGAACTTCATTAGTGTTCATCCCATCTGTTCGAACGAATTCAACGAGATAGAGGAGAATCCCGTTGCAAATTTAGAGACCGAATCGTCGAGGGTATCTGTTTTGGACACATCAAAGGAGAAAAGTGATGAGCCATTTGCAGAACCGCCCGTAAAACGTAGAAAACGACACCGGAGAAAGCAGTTTCCAGAAGAATGTTTCTTAATGAGAGGTGTTTATTTCAAGAACATGAAATGGCAGGCTGCTATTAAGGTTGACAAGAAACAAATACACTTGGGAACTGTTGAATCACAAGAAGAAGCTGCTCATTTGTATGACAGAGCTGCTTTCATGTGCGGAAGGGAACCCAACTTCGAGCTCCCAGAGGCGGAGAAGAAAGAACTGAGAAAGTTTAATTGGGACGAGTTCTTAGCAATGACTCGGCTCGCAATCGCTAATAAAAAACAAAAGAGGGTCAGCCCAGAATCAAAGAACTCGAAACTTCCTATTGTAGGGAACGACGACTTGAACAAGAGACAGGATGAGTTCATTGACCTCTCAGCTCCAGAAGATATTGAGCCACTTGCCTTGAAATTTTGA

Protein sequence

MVSLRRRKLLGLCTGKGSFDAPVSKSSENSTAEDLEHCTNFISVHPICSNEFNEIEENPVANLETESSRVSVLDTSKEKSDEPFAEPPVKRRKRHRRKQFPEECFLMRGVYFKNMKWQAAIKVDKKQIHLGTVESQEEAAHLYDRAAFMCGREPNFELPEAEKKELRKFNWDEFLAMTRLAIANKKQKRVSPESKNSKLPIVGNDDLNKRQDEFIDLSAPEDIEPLALKF
Homology
[Close]
BLAST of CmoCh02G017160 vs. ExPASy Swiss-Prot
Match: Q56XP9 (Ethylene-responsive transcription factor-like protein At4g13040 OS=Arabidopsis thaliana OX=3702 GN=At4g13040 PE=2 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 2.2e-35
Identity = 104/217 (47.93%), Postives = 128/217 (58.99%), Query Frame = 0 

Query: 1   MVSLRRRKLLGLCTGKGSFDAPVSKSSENSTAEDLEHCTNFISVHPICSN-------EFN 60
           MVSLRRR+LLGLC G   +  P+   +       + +     + +P  +        E  
Sbjct: 1   MVSLRRRRLLGLCCGPNGYVTPLPFLTAEEMITGIPNPNARAAYNPGPAETVTTVIVEKK 60

Query: 61  EIEENPVANLETESS----RVSVLDTSKEKSD--EPFAEPPVKRRKRHRRKQ-FPEECFL 120
            IEE    +  T S     R    D S   SD   P  +PP KRRK+HRRK+   +E  L
Sbjct: 61  AIEER---SRRTRSKHMHFRSDYSDISPVNSDSISPKYQPP-KRRKQHRRKRVHNQEPCL 120

Query: 121 MRGVYFKNMKWQAAIKVDKKQIHLGTVESQEEAAHLYDRAAFMCGREPNFELPEAEKKEL 180
           MRGVY+KNMKWQAAIKV+KKQIHLGT  SQEEAA LYDRAAFMCGREPNFEL E   +EL
Sbjct: 121 MRGVYYKNMKWQAAIKVEKKQIHLGTFSSQEEAARLYDRAAFMCGREPNFELSEEVIREL 180

Query: 181 RKFNWDEFLAMTRLAIANKKQK-RVSPESK--NSKLP 201
           ++ +W+EFL  TR  I NKK K R+  E    N+ +P
Sbjct: 181 KQQSWEEFLNCTRRTITNKKPKSRIEHEDTKINASMP 213

[Close]
BLAST of CmoCh02G017160 vs. ExPASy TrEMBL
Match: A0A6J1ESB0 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437284 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.4e-125
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 

Query: 1   MVSLRRRKLLGLCTGKGSFDAPVSKSSENSTAEDLEHCTNFISVHPICSNEFNEIEENPV 60
           MVSLRRRKLLGLCTGKGSFDAPVSKSSENSTAEDLEHCTNFISVHPICSNEFNEIEENPV
Sbjct: 1   MVSLRRRKLLGLCTGKGSFDAPVSKSSENSTAEDLEHCTNFISVHPICSNEFNEIEENPV 60

Query: 61  ANLETESSRVSVLDTSKEKSDEPFAEPPVKRRKRHRRKQFPEECFLMRGVYFKNMKWQAA 120
           ANLETESSRVSVLDTSKEKSDEPFAEPPVKRRKRHRRKQFPEECFLMRGVYFKNMKWQAA
Sbjct: 61  ANLETESSRVSVLDTSKEKSDEPFAEPPVKRRKRHRRKQFPEECFLMRGVYFKNMKWQAA 120

Query: 121 IKVDKKQIHLGTVESQEEAAHLYDRAAFMCGREPNFELPEAEKKELRKFNWDEFLAMTRL 180
           IKVDKKQIHLGTVESQEEAAHLYDRAAFMCGREPNFELPEAEKKELRKFNWDEFLAMTRL
Sbjct: 121 IKVDKKQIHLGTVESQEEAAHLYDRAAFMCGREPNFELPEAEKKELRKFNWDEFLAMTRL 180

Query: 181 AIANKKQKRVSPESKNSKLPIVGNDDLNKRQDEFIDLSAPEDIEPLALKF 231
           AIANKKQKRVSPESKNSKLPIVGNDDLNKRQDEFIDLSAPEDIEPLALKF
Sbjct: 181 AIANKKQKRVSPESKNSKLPIVGNDDLNKRQDEFIDLSAPEDIEPLALKF 230

[Close]
BLAST of CmoCh02G017160 vs. ExPASy TrEMBL
Match: A0A6J1EWY2 (ethylene-responsive transcription factor-like protein At4g13040 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437284 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.3e-123
Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 0 

Query: 1   MVSLRRRKLLGLCTGKGSFDAPVSKSSENSTAEDLEHCTNFISVHPICSNEFNEIEENPV 60
           MVSLRRRKLLGLCTGKGSFDAPVSKSSENSTAEDLEHCTNFISVHPICSNEFNEI ENPV
Sbjct: 1   MVSLRRRKLLGLCTGKGSFDAPVSKSSENSTAEDLEHCTNFISVHPICSNEFNEI-ENPV 60

Query: 61  ANLETESSRVSVLDTSKEKSDEPFAEPPVKRRKRHRRKQFPEECFLMRGVYFKNMKWQAA 120
           ANLETESSRVSVLDTSKEKSDEPFAEPPVKRRKRHRRKQFPEECFLMRGVYFKNMKWQAA
Sbjct: 61  ANLETESSRVSVLDTSKEKSDEPFAEPPVKRRKRHRRKQFPEECFLMRGVYFKNMKWQAA 120

Query: 121 IKVDKKQIHLGTVESQEEAAHLYDRAAFMCGREPNFELPEAEKKELRKFNWDEFLAMTRL 180
           IKVDKKQIHLGTVESQEEAAHLYDRAAFMCGREPNFELPEAEKKELRKFNWDEFLAMTRL
Sbjct: 121 IKVDKKQIHLGTVESQEEAAHLYDRAAFMCGREPNFELPEAEKKELRKFNWDEFLAMTRL 180

Query: 181 AIANKKQKRVSPESKNSKLPIVGNDDLNKRQDEFIDLSAPEDIEPLALKF 231
           AIANKKQKRVSPESKNSKLPIVGNDDLNKRQDEFIDLSAPEDIEPLALKF
Sbjct: 181 AIANKKQKRVSPESKNSKLPIVGNDDLNKRQDEFIDLSAPEDIEPLALKF 229

[Close]
BLAST of CmoCh02G017160 vs. ExPASy TrEMBL
Match: A0A6J1K7F1 (ethylene-responsive transcription factor-like protein At4g13040 OS=Cucurbita maxima OX=3661 GN=LOC111491324 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.5e-111
Identity = 210/230 (91.30%), Postives = 215/230 (93.48%), Query Frame = 0 

Query: 1   MVSLRRRKLLGLCTGKGSFDAPVSKSSENSTAEDLEHCTNFISVHPICSNEFNEIEENPV 60
           MVSLRRRKLLGLCTGKGSFDAPVSK SENS   DLEHC+NFISVHPI SNEFNEIE+ P 
Sbjct: 1   MVSLRRRKLLGLCTGKGSFDAPVSKFSENS---DLEHCSNFISVHPIFSNEFNEIEKIPA 60

Query: 61  ANLETESSRVSVLDTSKEKSDEPFAEPPVKRRKRHRRKQFPEECFLMRGVYFKNMKWQAA 120
           ANLETE  RVSV DTSKEKSDEPF EPPVK RK+HRRK FPEECFLMRGVYFKNMKWQAA
Sbjct: 61  ANLETEPLRVSVFDTSKEKSDEPFEEPPVKHRKQHRRKHFPEECFLMRGVYFKNMKWQAA 120

Query: 121 IKVDKKQIHLGTVESQEEAAHLYDRAAFMCGREPNFELPEAEKKELRKFNWDEFLAMTRL 180
           IKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPEAEKKELRKFNWDEFLAMTRL
Sbjct: 121 IKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEAEKKELRKFNWDEFLAMTRL 180

Query: 181 AIANKKQKRVSPESKNSKLPIVGNDDLNKRQDEFIDLSAPEDIEPLALKF 231
           AIANKKQKRVSPESKNSKLPI+G+DDLNKRQDEF DLSAPEDIEPLALKF
Sbjct: 181 AIANKKQKRVSPESKNSKLPILGSDDLNKRQDEFSDLSAPEDIEPLALKF 227

[Close]
BLAST of CmoCh02G017160 vs. ExPASy TrEMBL
Match: A0A0A0LCE7 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G630280 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 9.9e-92
Identity = 178/231 (77.06%), Postives = 197/231 (85.28%), Query Frame = 0 

Query: 1   MVSLRRRKLLGLCTGKGSFDAPVSKSSENSTAEDLEHCTNFISVHPICSNEFNEIEENPV 60
           MVSLRRRKLLGL +GK SF APV K SEN TAED  HCT+F+ V+PICS++ N+IEENP 
Sbjct: 1   MVSLRRRKLLGLYSGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPT 60

Query: 61  ANLETESSRVSVLDTSKEK----SDEPFAEPPVKRRKRHRRKQFPEECFLMRGVYFKNMK 120
           AN+E ESS VSVLDTSKE+    +DEP A+PPVKRRKRHRRK FP+E FLMRGVYFKNMK
Sbjct: 61  ANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120

Query: 121 WQAAIKVDKKQIHLGTVESQEEAAHLYDRAAFMCGREPNFELPEAEKKELRKFNWDEFLA 180
           WQAAIKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPE EK+ELRKFNWDEFLA
Sbjct: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180

Query: 181 MTRLAIANKKQKRVSPESKNSKLPIVGNDDLNKRQDEFIDLSAPEDIEPLA 228
           MTR  I N+KQKR+SPESK S+L   GNDD NKR D+FID S  ED+EP+A
Sbjct: 181 MTRNTITNRKQKRLSPESKKSELSSPGNDDSNKRHDKFIDPSFLEDVEPVA 231

[Close]
BLAST of CmoCh02G017160 vs. ExPASy TrEMBL
Match: A0A6J1DZ33 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025925 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 2.1e-86
Identity = 167/228 (73.25%), Postives = 193/228 (84.65%), Query Frame = 0 

Query: 1   MVSLRRRKLLGLCTGKGSFDAPVSKSSENSTAEDLEHCTNFISVHPICSNEFNEIEENPV 60
           MVSLRRRKLLG C+GKGSF APV K SEN T E+  HCTNF+SVHPICS++ N+I+ENP+
Sbjct: 1   MVSLRRRKLLGFCSGKGSFLAPVHKFSENLTTENPIHCTNFVSVHPICSDDINKIKENPI 60

Query: 61  ANLETE-SSRVSVLDTSKEKSDEPFAEPPVKRRKRHRRKQFPEECFLMRGVYFKNMKWQA 120
           AN E E SSRV+VLDTSKEK++E  A+PPV+ RKRH RK+FP+E FLMRGVYFKNMKWQA
Sbjct: 61  ANTEPESSSRVTVLDTSKEKNEESIADPPVQCRKRHWRKRFPDEPFLMRGVYFKNMKWQA 120

Query: 121 AIKVDKKQIHLGTVESQEEAAHLYDRAAFMCGREPNFELPEAEKKELRKFNWDEFLAMTR 180
           AIKVDKKQIHLGTV SQEEAAHLYDRAAFMCGR+PNFELPE EK+ELRK NWD+FLA+TR
Sbjct: 121 AIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGRKPNFELPEEEKQELRKLNWDQFLAVTR 180

Query: 181 LAIANKKQKRVSPESKNSKLPIVGNDDLNKRQDEFIDLSAPEDIEPLA 228
             I N+KQKR+SPES  SKLP  GN D +KR  +F +LS  ED++P A
Sbjct: 181 HVITNRKQKRLSPESNKSKLPSSGNHDSDKRHGKFSNLSTLEDMKPEA 228

[Close]
BLAST of CmoCh02G017160 vs. TAIR 10
Match: AT4G13040.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.5e-36
Identity = 104/217 (47.93%), Postives = 128/217 (58.99%), Query Frame = 0 

Query: 1   MVSLRRRKLLGLCTGKGSFDAPVSKSSENSTAEDLEHCTNFISVHPICSN-------EFN 60
           MVSLRRR+LLGLC G   +  P+   +       + +     + +P  +        E  
Sbjct: 1   MVSLRRRRLLGLCCGPNGYVTPLPFLTAEEMITGIPNPNARAAYNPGPAETVTTVIVEKK 60

Query: 61  EIEENPVANLETESS----RVSVLDTSKEKSD--EPFAEPPVKRRKRHRRKQ-FPEECFL 120
            IEE    +  T S     R    D S   SD   P  +PP KRRK+HRRK+   +E  L
Sbjct: 61  AIEER---SRRTRSKHMHFRSDYSDISPVNSDSISPKYQPP-KRRKQHRRKRVHNQEPCL 120

Query: 121 MRGVYFKNMKWQAAIKVDKKQIHLGTVESQEEAAHLYDRAAFMCGREPNFELPEAEKKEL 180
           MRGVY+KNMKWQAAIKV+KKQIHLGT  SQEEAA LYDRAAFMCGREPNFEL E   +EL
Sbjct: 121 MRGVYYKNMKWQAAIKVEKKQIHLGTFSSQEEAARLYDRAAFMCGREPNFELSEEVIREL 180

Query: 181 RKFNWDEFLAMTRLAIANKKQK-RVSPESK--NSKLP 201
           ++ +W+EFL  TR  I NKK K R+  E    N+ +P
Sbjct: 181 KQQSWEEFLNCTRRTITNKKPKSRIEHEDTKINASMP 213

[Close]
BLAST of CmoCh02G017160 vs. TAIR 10
Match: AT4G13040.3 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.5e-36
Identity = 104/217 (47.93%), Postives = 128/217 (58.99%), Query Frame = 0 

Query: 1   MVSLRRRKLLGLCTGKGSFDAPVSKSSENSTAEDLEHCTNFISVHPICSN-------EFN 60
           MVSLRRR+LLGLC G   +  P+   +       + +     + +P  +        E  
Sbjct: 21  MVSLRRRRLLGLCCGPNGYVTPLPFLTAEEMITGIPNPNARAAYNPGPAETVTTVIVEKK 80

Query: 61  EIEENPVANLETESS----RVSVLDTSKEKSD--EPFAEPPVKRRKRHRRKQ-FPEECFL 120
            IEE    +  T S     R    D S   SD   P  +PP KRRK+HRRK+   +E  L
Sbjct: 81  AIEER---SRRTRSKHMHFRSDYSDISPVNSDSISPKYQPP-KRRKQHRRKRVHNQEPCL 140

Query: 121 MRGVYFKNMKWQAAIKVDKKQIHLGTVESQEEAAHLYDRAAFMCGREPNFELPEAEKKEL 180
           MRGVY+KNMKWQAAIKV+KKQIHLGT  SQEEAA LYDRAAFMCGREPNFEL E   +EL
Sbjct: 141 MRGVYYKNMKWQAAIKVEKKQIHLGTFSSQEEAARLYDRAAFMCGREPNFELSEEVIREL 200

Query: 181 RKFNWDEFLAMTRLAIANKKQK-RVSPESK--NSKLP 201
           ++ +W+EFL  TR  I NKK K R+  E    N+ +P
Sbjct: 201 KQQSWEEFLNCTRRTITNKKPKSRIEHEDTKINASMP 233

[Close]
BLAST of CmoCh02G017160 vs. TAIR 10
Match: AT4G13040.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.6e-33
Identity = 76/120 (63.33%), Postives = 91/120 (75.83%), Query Frame = 0 

Query: 85  AEPPVKRRKRHRRKQ-FPEECFLMRGVYFKNMKWQAAIKVDKKQIHLGTVESQEEAAHLY 144
           ++ P KRRK+HRRK+   +E  LMRGVY+KNMKWQAAIKV+KKQIHLGT  SQEEAA LY
Sbjct: 38  SDQPPKRRKQHRRKRVHNQEPCLMRGVYYKNMKWQAAIKVEKKQIHLGTFSSQEEAARLY 97

Query: 145 DRAAFMCGREPNFELPEAEKKELRKFNWDEFLAMTRLAIANKKQK-RVSPESK--NSKLP 201
           DRAAFMCGREPNFEL E   +EL++ +W+EFL  TR  I NKK K R+  E    N+ +P
Sbjct: 98  DRAAFMCGREPNFELSEEVIRELKQQSWEEFLNCTRRTITNKKPKSRIEHEDTKINASMP 157

The following BLAST results are available for this feature:
BLAST of CmoCh02G017160 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q56XP92.2e-3547.93Ethylene-responsive transcription factor-like protein At4g13040 OS=Arabidopsis t... [more]
BLAST of CmoCh02G017160 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ESB01.4e-125100.00ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Cu... [more]
A0A6J1EWY21.3e-12399.57ethylene-responsive transcription factor-like protein At4g13040 isoform X2 OS=Cu... [more]
A0A6J1K7F11.5e-11191.30ethylene-responsive transcription factor-like protein At4g13040 OS=Cucurbita max... [more]
A0A0A0LCE79.9e-9277.06AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G630280 PE=... [more]
A0A6J1DZ332.1e-8673.25ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Mo... [more]
BLAST of CmoCh02G017160 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G13040.11.5e-3647.93Integrase-type DNA-binding superfamily protein [more]
AT4G13040.31.5e-3647.93Integrase-type DNA-binding superfamily protein [more]
AT4G13040.21.6e-3363.33Integrase-type DNA-binding superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 106..163
e-value: 5.0E-4
score: 20.8
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 108..158
e-value: 2.5E-8
score: 35.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..95
NoneNo IPR availablePANTHERPTHR32467:SF4OS02G0499000 PROTEINcoord: 1..212
NoneNo IPR availablePANTHERPTHR32467AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTORcoord: 1..212
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 107..151

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G017160.1CmoCh02G017160.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity