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CmoCh02G016500 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAACGCCAGACGTTGTCGACGACGATGACTCGTGGGAAGTCAGGGCTTTCGCGGAGGACACGGCTGATGTCATGGGAACTACTTGGCCTCCTAGGTCATACACTTGCACTTTTTGTAGAAGAGAGTTCAGGTCTGCTCAAGCCCTAGGTGGTCATATGAATGTTCACCGTCGCGATCGTGCTCGGCTCCATCAAGCCCCGTCGAACGCAATCAAACCCTTTTCTTCCTCTTCTTCTTCTTCTTCTTCTACTTCGAATTCTTTCATTATCCCAGCTCATGATTTTAATGGTGGAGGGTTGTGTGTTCTCTACCCATTCCCAAACCCTTACAGCATTCGCTCACCCTCTTCTCTTTTCTCTATGTCCCATCATTCCTTCAACAACTTCATGCCCTCGACCTCGCCCGCCTCAGCCTTTCCGATTCGTAATCACCGTGCCGGAGCGAGTAGTTTCCCTCAATCCTTGAGTGATGAACAAGCCATGGAAAGTAGCAACCAAGAGGTTGATCTAGAGCTCAGGCTTGGACAAGCTCCTTCAACTCAAACTCTCATGGAAAAGGGACACAAAATCTCTAATTTTGAAGCTGCTTGTCTGAGGAAGAGATCATCAGATTGA ATGCAAACGCCAGACGTTGTCGACGACGATGACTCGTGGGAAGTCAGGGCTTTCGCGGAGGACACGGCTGATGTCATGGGAACTACTTGGCCTCCTAGGTCATACACTTGCACTTTTTGTAGAAGAGAGTTCAGGTCTGCTCAAGCCCTAGGTGGTCATATGAATGTTCACCGTCGCGATCGTGCTCGGCTCCATCAAGCCCCGTCGAACGCAATCAAACCCTTTTCTTCCTCTTCTTCTTCTTCTTCTTCTACTTCGAATTCTTTCATTATCCCAGCTCATGATTTTAATGGTGGAGGGTTGTGTGTTCTCTACCCATTCCCAAACCCTTACAGCATTCGCTCACCCTCTTCTCTTTTCTCTATGTCCCATCATTCCTTCAACAACTTCATGCCCTCGACCTCGCCCGCCTCAGCCTTTCCGATTCGTAATCACCGTGCCGGAGCGAGTAGTTTCCCTCAATCCTTGAGTGATGAACAAGCCATGGAAAGTAGCAACCAAGAGGTTGATCTAGAGCTCAGGCTTGGACAAGCTCCTTCAACTCAAACTCTCATGGAAAAGGGACACAAAATCTCTAATTTTGAAGCTGCTTGTCTGAGGAAGAGATCATCAGATTGA ATGCAAACGCCAGACGTTGTCGACGACGATGACTCGTGGGAAGTCAGGGCTTTCGCGGAGGACACGGCTGATGTCATGGGAACTACTTGGCCTCCTAGGTCATACACTTGCACTTTTTGTAGAAGAGAGTTCAGGTCTGCTCAAGCCCTAGGTGGTCATATGAATGTTCACCGTCGCGATCGTGCTCGGCTCCATCAAGCCCCGTCGAACGCAATCAAACCCTTTTCTTCCTCTTCTTCTTCTTCTTCTTCTACTTCGAATTCTTTCATTATCCCAGCTCATGATTTTAATGGTGGAGGGTTGTGTGTTCTCTACCCATTCCCAAACCCTTACAGCATTCGCTCACCCTCTTCTCTTTTCTCTATGTCCCATCATTCCTTCAACAACTTCATGCCCTCGACCTCGCCCGCCTCAGCCTTTCCGATTCGTAATCACCGTGCCGGAGCGAGTAGTTTCCCTCAATCCTTGAGTGATGAACAAGCCATGGAAAGTAGCAACCAAGAGGTTGATCTAGAGCTCAGGCTTGGACAAGCTCCTTCAACTCAAACTCTCATGGAAAAGGGACACAAAATCTCTAATTTTGAAGCTGCTTGTCTGAGGAAGAGATCATCAGATTGA MQTPDVVDDDDSWEVRAFAEDTADVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQAPSNAIKPFSSSSSSSSSTSNSFIIPAHDFNGGGLCVLYPFPNPYSIRSPSSLFSMSHHSFNNFMPSTSPASAFPIRNHRAGASSFPQSLSDEQAMESSNQEVDLELRLGQAPSTQTLMEKGHKISNFEAACLRKRSSD Homology
BLAST of CmoCh02G016500 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18 Identity = 72/161 (44.72%), Postives = 89/161 (55.28%), Query Frame = 0
BLAST of CmoCh02G016500 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 7.6e-16 Identity = 44/70 (62.86%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of CmoCh02G016500 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 6.5e-15 Identity = 56/129 (43.41%), Postives = 68/129 (52.71%), Query Frame = 0
BLAST of CmoCh02G016500 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2) HSP 1 Score: 77.8 bits (190), Expect = 1.6e-13 Identity = 41/70 (58.57%), Postives = 50/70 (71.43%), Query Frame = 0
BLAST of CmoCh02G016500 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.0e-07 Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0
BLAST of CmoCh02G016500 vs. ExPASy TrEMBL
Match: A0A6J1EYW0 (zinc finger protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111437469 PE=4 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 5.5e-110 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of CmoCh02G016500 vs. ExPASy TrEMBL
Match: A0A6J1K623 (transcriptional regulator SUPERMAN-like OS=Cucurbita maxima OX=3661 GN=LOC111491029 PE=4 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 9.1e-105 Identity = 201/209 (96.17%), Postives = 202/209 (96.65%), Query Frame = 0
BLAST of CmoCh02G016500 vs. ExPASy TrEMBL
Match: A0A6J1E087 (transcriptional regulator SUPERMAN-like OS=Momordica charantia OX=3673 GN=LOC111025958 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 3.0e-63 Identity = 140/208 (67.31%), Postives = 156/208 (75.00%), Query Frame = 0
BLAST of CmoCh02G016500 vs. ExPASy TrEMBL
Match: A0A5D3E693 (Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004360 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 6.6e-63 Identity = 149/228 (65.35%), Postives = 168/228 (73.68%), Query Frame = 0
BLAST of CmoCh02G016500 vs. ExPASy TrEMBL
Match: A0A1S3CRJ1 (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103503534 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 6.6e-63 Identity = 149/228 (65.35%), Postives = 168/228 (73.68%), Query Frame = 0
BLAST of CmoCh02G016500 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 109.8 bits (273), Expect = 2.7e-24 Identity = 79/195 (40.51%), Postives = 107/195 (54.87%), Query Frame = 0
BLAST of CmoCh02G016500 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 ) HSP 1 Score: 94.7 bits (234), Expect = 8.9e-20 Identity = 72/161 (44.72%), Postives = 89/161 (55.28%), Query Frame = 0
BLAST of CmoCh02G016500 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 ) HSP 1 Score: 85.5 bits (210), Expect = 5.4e-17 Identity = 44/70 (62.86%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of CmoCh02G016500 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 82.4 bits (202), Expect = 4.6e-16 Identity = 56/129 (43.41%), Postives = 68/129 (52.71%), Query Frame = 0
BLAST of CmoCh02G016500 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 77.8 bits (190), Expect = 1.1e-14 Identity = 41/70 (58.57%), Postives = 50/70 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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