CmoCh02G016500 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G016500
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcriptional regulator SUPERMAN-like
Location	Cmo_Chr02: 9518170 .. 9518787 (-)
RNA-Seq Expression	CmoCh02G016500
Synteny	CmoCh02G016500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAACGCCAGACGTTGTCGACGACGATGACTCGTGGGAAGTCAGGGCTTTCGCGGAGGACACGGCTGATGTCATGGGAACTACTTGGCCTCCTAGGTCATACACTTGCACTTTTTGTAGAAGAGAGTTCAGGTCTGCTCAAGCCCTAGGTGGTCATATGAATGTTCACCGTCGCGATCGTGCTCGGCTCCATCAAGCCCCGTCGAACGCAATCAAACCCTTTTCTTCCTCTTCTTCTTCTTCTTCTTCTACTTCGAATTCTTTCATTATCCCAGCTCATGATTTTAATGGTGGAGGGTTGTGTGTTCTCTACCCATTCCCAAACCCTTACAGCATTCGCTCACCCTCTTCTCTTTTCTCTATGTCCCATCATTCCTTCAACAACTTCATGCCCTCGACCTCGCCCGCCTCAGCCTTTCCGATTCGTAATCACCGTGCCGGAGCGAGTAGTTTCCCTCAATCCTTGAGTGATGAACAAGCCATGGAAAGTAGCAACCAAGAGGTTGATCTAGAGCTCAGGCTTGGACAAGCTCCTTCAACTCAAACTCTCATGGAAAAGGGACACAAAATCTCTAATTTTGAAGCTGCTTGTCTGAGGAAGAGATCATCAGATTGA

mRNA sequence

ATGCAAACGCCAGACGTTGTCGACGACGATGACTCGTGGGAAGTCAGGGCTTTCGCGGAGGACACGGCTGATGTCATGGGAACTACTTGGCCTCCTAGGTCATACACTTGCACTTTTTGTAGAAGAGAGTTCAGGTCTGCTCAAGCCCTAGGTGGTCATATGAATGTTCACCGTCGCGATCGTGCTCGGCTCCATCAAGCCCCGTCGAACGCAATCAAACCCTTTTCTTCCTCTTCTTCTTCTTCTTCTTCTACTTCGAATTCTTTCATTATCCCAGCTCATGATTTTAATGGTGGAGGGTTGTGTGTTCTCTACCCATTCCCAAACCCTTACAGCATTCGCTCACCCTCTTCTCTTTTCTCTATGTCCCATCATTCCTTCAACAACTTCATGCCCTCGACCTCGCCCGCCTCAGCCTTTCCGATTCGTAATCACCGTGCCGGAGCGAGTAGTTTCCCTCAATCCTTGAGTGATGAACAAGCCATGGAAAGTAGCAACCAAGAGGTTGATCTAGAGCTCAGGCTTGGACAAGCTCCTTCAACTCAAACTCTCATGGAAAAGGGACACAAAATCTCTAATTTTGAAGCTGCTTGTCTGAGGAAGAGATCATCAGATTGA

Coding sequence (CDS)

ATGCAAACGCCAGACGTTGTCGACGACGATGACTCGTGGGAAGTCAGGGCTTTCGCGGAGGACACGGCTGATGTCATGGGAACTACTTGGCCTCCTAGGTCATACACTTGCACTTTTTGTAGAAGAGAGTTCAGGTCTGCTCAAGCCCTAGGTGGTCATATGAATGTTCACCGTCGCGATCGTGCTCGGCTCCATCAAGCCCCGTCGAACGCAATCAAACCCTTTTCTTCCTCTTCTTCTTCTTCTTCTTCTACTTCGAATTCTTTCATTATCCCAGCTCATGATTTTAATGGTGGAGGGTTGTGTGTTCTCTACCCATTCCCAAACCCTTACAGCATTCGCTCACCCTCTTCTCTTTTCTCTATGTCCCATCATTCCTTCAACAACTTCATGCCCTCGACCTCGCCCGCCTCAGCCTTTCCGATTCGTAATCACCGTGCCGGAGCGAGTAGTTTCCCTCAATCCTTGAGTGATGAACAAGCCATGGAAAGTAGCAACCAAGAGGTTGATCTAGAGCTCAGGCTTGGACAAGCTCCTTCAACTCAAACTCTCATGGAAAAGGGACACAAAATCTCTAATTTTGAAGCTGCTTGTCTGAGGAAGAGATCATCAGATTGA

Protein sequence

MQTPDVVDDDDSWEVRAFAEDTADVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQAPSNAIKPFSSSSSSSSSTSNSFIIPAHDFNGGGLCVLYPFPNPYSIRSPSSLFSMSHHSFNNFMPSTSPASAFPIRNHRAGASSFPQSLSDEQAMESSNQEVDLELRLGQAPSTQTLMEKGHKISNFEAACLRKRSSD

Homology

[Close]

BLAST of CmoCh02G016500 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18
Identity = 72/161 (44.72%), Postives = 89/161 (55.28%), Query Frame = 0


Query: 4   PDVVDDDDSWEVRAFAEDTADVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRAR 63
           P   + + SWE  AFAED  D  G+ WPPRSYTC+FCRREF+SAQALGGHMNVHRRDRAR
Sbjct: 10  PKKSNKESSWEELAFAED--DAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRAR 69

Query: 64  LHQAPSNAIKPFSSSSSSSSSTSNSFIIPAHDFNGGGLCVLYPFPNPYSIRSPSSLFSMS 123
           L QA    + P SSSS    S  +S  I  H+ +   L V    PN Y     S +  +S
Sbjct: 70  LKQADDQYLFPKSSSSPEYPSHKDSDNI--HETSCYTL-VFNTKPN-YFKTQHSCVIDLS 129

Query: 124 HHSFNNFMPSTSPASAFPIRNHRAGASSFPQSLSDEQAMES 165
             S   ++  +  +S  P + H    SS P S   E +  S
Sbjct: 130 SSSSLPYLTPSRVSSGLPGKQH---TSSSPPSFVVEPSKNS 161

[Close]

BLAST of CmoCh02G016500 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 7.6e-16
Identity = 44/70 (62.86%), Postives = 53/70 (75.71%), Query Frame = 0


Query: 30  WPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQAPSNAIKP------------FSS 88
           WPP++YTC+FCRREFRSAQALGGHMNVHRRDRA+L Q PS   +P            FSS
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNPNFSS 103

[Close]

BLAST of CmoCh02G016500 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 6.5e-15
Identity = 56/129 (43.41%), Postives = 68/129 (52.71%), Query Frame = 0


Query: 20  EDTADVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQAPSNAIKPFSSSS 79
           +D   ++G +WPPRSYTC+FC+REFRSAQALGGHMNVHRRDRARL              S
Sbjct: 32  QDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR----------LQQS 91

Query: 80  SSSSSTSNSFIIPAHDFNGGGLCVLYPFPNPYSIRSPSSLFSMSHHSFNNFMPSTSPASA 139
            SSSST +                  P+PNP    S  +     HHS     P+ SP S+
Sbjct: 92  PSSSSTPSP-----------------PYPNPNYSYSTMANSPPPHHSPLTLFPTLSPPSS 130

Query: 140 FPIRNHRAG 149
                +RAG
Sbjct: 152 ---PRYRAG 130

[Close]

BLAST of CmoCh02G016500 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 1.6e-13
Identity = 41/70 (58.57%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 14 EVRAF--AEDTADVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQAPSNA 73
          E RAF  AE+     G  WPPRSY+C+FC REF+SAQALGGHMNVHRRDRARL Q    +
Sbjct: 32 EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQ---QS 91

Query: 74 IKPFSSSSSS 82
          + P S+  ++
Sbjct: 92 LSPSSTDQAT 98

[Close]

BLAST of CmoCh02G016500 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-07
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0


Query: 33 RSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQ 67
          RSY C+FC R F +AQALGGHMN+HRRDRA+L Q
Sbjct: 33 RSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQ 66

[Close]

BLAST of CmoCh02G016500 vs. ExPASy TrEMBL
Match: A0A6J1EYW0 (zinc finger protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111437469 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 5.5e-110
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MQTPDVVDDDDSWEVRAFAEDTADVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRD 60
           MQTPDVVDDDDSWEVRAFAEDTADVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRD
Sbjct: 36  MQTPDVVDDDDSWEVRAFAEDTADVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRD 95

Query: 61  RARLHQAPSNAIKPFSSSSSSSSSTSNSFIIPAHDFNGGGLCVLYPFPNPYSIRSPSSLF 120
           RARLHQAPSNAIKPFSSSSSSSSSTSNSFIIPAHDFNGGGLCVLYPFPNPYSIRSPSSLF
Sbjct: 96  RARLHQAPSNAIKPFSSSSSSSSSTSNSFIIPAHDFNGGGLCVLYPFPNPYSIRSPSSLF 155

Query: 121 SMSHHSFNNFMPSTSPASAFPIRNHRAGASSFPQSLSDEQAMESSNQEVDLELRLGQAPS 180
           SMSHHSFNNFMPSTSPASAFPIRNHRAGASSFPQSLSDEQAMESSNQEVDLELRLGQAPS
Sbjct: 156 SMSHHSFNNFMPSTSPASAFPIRNHRAGASSFPQSLSDEQAMESSNQEVDLELRLGQAPS 215

Query: 181 TQTLMEKGHKISNFEAACLRKRSSD 206
           TQTLMEKGHKISNFEAACLRKRSSD
Sbjct: 216 TQTLMEKGHKISNFEAACLRKRSSD 240

[Close]

BLAST of CmoCh02G016500 vs. ExPASy TrEMBL
Match: A0A6J1K623 (transcriptional regulator SUPERMAN-like OS=Cucurbita maxima OX=3661 GN=LOC111491029 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 9.1e-105
Identity = 201/209 (96.17%), Postives = 202/209 (96.65%), Query Frame = 0


Query: 1   MQTPDVVDDDDSWEVRAFAEDTADVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRD 60
           MQTPDVVDDDDSWEVRAFAEDTADVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRD
Sbjct: 35  MQTPDVVDDDDSWEVRAFAEDTADVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRD 94

Query: 61  RARLHQAPSNAIKPFSSSSSSSSS----TSNSFIIPAHDFNGGGLCVLYPFPNPYSIRSP 120
           RARLHQAPSNAIKPFSSSSSSSSS    TSNSFIIPAHDFNGGGLCVLYPFPNPY+IRSP
Sbjct: 95  RARLHQAPSNAIKPFSSSSSSSSSSSSLTSNSFIIPAHDFNGGGLCVLYPFPNPYNIRSP 154

Query: 121 SSLFSMSHHSFNNFMPSTSPASAFPIRNHRAGASSFPQSLSDEQAMESSNQEVDLELRLG 180
           SSLFSMSHHSFNNFMPST   SAFPIRNHRAGASSFPQSLSDEQAMESSNQEVDLELRLG
Sbjct: 155 SSLFSMSHHSFNNFMPST---SAFPIRNHRAGASSFPQSLSDEQAMESSNQEVDLELRLG 214

Query: 181 QAPSTQTLMEKGHKISNFEAACLRKRSSD 206
           QAPSTQTLMEKGHKISNFEAACLRKRSSD
Sbjct: 215 QAPSTQTLMEKGHKISNFEAACLRKRSSD 240

[Close]

BLAST of CmoCh02G016500 vs. ExPASy TrEMBL
Match: A0A6J1E087 (transcriptional regulator SUPERMAN-like OS=Momordica charantia OX=3673 GN=LOC111025958 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 3.0e-63
Identity = 140/208 (67.31%), Postives = 156/208 (75.00%), Query Frame = 0


Query: 1   MQTPD-VVDDDDSWEVRAFAEDTADVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRR 60
           MQTP+ VVDDDDSWEVRAFAEDTA+VMGTTWPPRSYTCT+CRREF+SAQALGGHMNVHRR
Sbjct: 27  MQTPEVVVDDDDSWEVRAFAEDTANVMGTTWPPRSYTCTYCRREFKSAQALGGHMNVHRR 86

Query: 61  DRARLHQAPSNAIKPFSSSSSSSSSTSNSFIIPAHDFNGGGLCVLYPFPNPYS------- 120
           DRARLHQAP+N IKP    SSSS S+S+SFIIP  DFNGGGLC+LY FPNP S       
Sbjct: 87  DRARLHQAPANPIKP----SSSSPSSSSSFIIPTPDFNGGGLCLLYQFPNPNSSGGMMIN 146

Query: 121 --------IRSPSSLFSMSHHSFNNFMPSTSPASAFPI--RNHRAGASSFPQSLSDEQAM 180
                   I SPSSLFSMSHHSFN+ MPST P S FP    +HRA   S   + S   +M
Sbjct: 147 RPTTLNAYIHSPSSLFSMSHHSFNHLMPSTLPPSGFPANDHDHRAATGSSSTNFS-AISM 206

Query: 181 ESSNQEVDLELRLGQAPSTQTLMEKGHK 191
           E+ NQE+DLELRLG  PS  TL+ KG +
Sbjct: 207 ENGNQELDLELRLGHGPSATTLIGKGRE 229

[Close]

BLAST of CmoCh02G016500 vs. ExPASy TrEMBL
Match: A0A5D3E693 (Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004360 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 6.6e-63
Identity = 149/228 (65.35%), Postives = 168/228 (73.68%), Query Frame = 0


Query: 1   MQTPD-VVDDDDSWEVRAFAEDTADVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRR 60
           MQTPD VVDDDDSWEVRAFAEDTA+VMGTTWPPRSYTCT+CRREFRSAQALGGHMNVHRR
Sbjct: 34  MQTPDVVVDDDDSWEVRAFAEDTANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRR 93

Query: 61  DRARL-HQAPSNAIKPFSSSSSSSSSTSNSFIIPAHDFNGGG-LCVLYPFPNPYS----- 120
           DRARL HQAPS++  P   SS+SSS+ SNSFIIP  DFNGGG LC+LY FPNP S     
Sbjct: 94  DRARLHHQAPSSSSNPMKPSSTSSSN-SNSFIIPTPDFNGGGSLCLLYQFPNPNSINGGI 153

Query: 121 ----------IRSPSSLFSMSHHSFNNFMPSTSPASAFPI--RNHRAGASSFPQSLSDEQ 180
                     I SPSSLFSM HHSFN +  STS ++AFP+   NHR   +S   +  +  
Sbjct: 154 NTSPSTLNAYIHSPSSLFSMPHHSFNTYPSSTSLSAAFPMNDNNHRRLETSTYSASMENN 213

Query: 181 AMESSNQEVDLELRLGQAP--STQTLMEKGH-KISNFEAACLRKRSSD 206
              S ++ +DLELRLG  P  STQ LMEKG  K+SN EAACL+KRSSD
Sbjct: 214 NGSSQDEVLDLELRLGHGPPSSTQNLMEKGEKKVSNSEAACLKKRSSD 260

[Close]

BLAST of CmoCh02G016500 vs. ExPASy TrEMBL
Match: A0A1S3CRJ1 (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103503534 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 6.6e-63
Identity = 149/228 (65.35%), Postives = 168/228 (73.68%), Query Frame = 0


Query: 1   MQTPD-VVDDDDSWEVRAFAEDTADVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRR 60
           MQTPD VVDDDDSWEVRAFAEDTA+VMGTTWPPRSYTCT+CRREFRSAQALGGHMNVHRR
Sbjct: 34  MQTPDVVVDDDDSWEVRAFAEDTANVMGTTWPPRSYTCTYCRREFRSAQALGGHMNVHRR 93

Query: 61  DRARL-HQAPSNAIKPFSSSSSSSSSTSNSFIIPAHDFNGGG-LCVLYPFPNPYS----- 120
           DRARL HQAPS++  P   SS+SSS+ SNSFIIP  DFNGGG LC+LY FPNP S     
Sbjct: 94  DRARLHHQAPSSSSNPMKPSSTSSSN-SNSFIIPTPDFNGGGSLCLLYQFPNPNSINGGI 153

Query: 121 ----------IRSPSSLFSMSHHSFNNFMPSTSPASAFPI--RNHRAGASSFPQSLSDEQ 180
                     I SPSSLFSM HHSFN +  STS ++AFP+   NHR   +S   +  +  
Sbjct: 154 NTSPSTLNAYIHSPSSLFSMPHHSFNTYPSSTSLSAAFPMNDNNHRRLETSTYSASMENN 213

Query: 181 AMESSNQEVDLELRLGQAP--STQTLMEKGH-KISNFEAACLRKRSSD 206
              S ++ +DLELRLG  P  STQ LMEKG  K+SN EAACL+KRSSD
Sbjct: 214 NGSSQDEVLDLELRLGHGPPSSTQNLMEKGEKKVSNSEAACLKKRSSD 260

[Close]

BLAST of CmoCh02G016500 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 2.7e-24
Identity = 79/195 (40.51%), Postives = 107/195 (54.87%), Query Frame = 0


Query: 5   DVVDDDDSWEVRAFAEDT-ADVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRA- 64
           ++ DDD+SWEV+AF +DT  ++ GTTWPPRSYTC FCRREFRSAQALGGHMNVHRRDRA 
Sbjct: 15  ELEDDDESWEVKAFEQDTKGNISGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRAS 74

Query: 65  -RLHQAPSNAIKPFSS------SSSSSSSTSNSFIIPAHDFNGGGLCVLYPFPNPYSIRS 124
            R HQ  + A    S       +S +    + + II +   N  GL       + Y +++
Sbjct: 75  SRAHQGSTVAAAARSGHGGMLLNSCAPPLPTTTLIIQSTASNIEGL------SHFYQLQN 134

Query: 125 PSSLFSMSHHSFNNFMPSTSPASAFPIRNHRAGASSFPQSL-----------SDEQAMES 180
           PS +F  S    N +  ++ P S  P     +     P+ +           S ++A  +
Sbjct: 135 PSGIFGNSGDMVNLYGTTSFPPSNLPFSMLNSPVEVPPRLIEYSTGDDESIGSMKEATGT 194

[Close]

BLAST of CmoCh02G016500 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 )

HSP 1 Score: 94.7 bits (234), Expect = 8.9e-20
Identity = 72/161 (44.72%), Postives = 89/161 (55.28%), Query Frame = 0


Query: 4   PDVVDDDDSWEVRAFAEDTADVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRAR 63
           P   + + SWE  AFAED  D  G+ WPPRSYTC+FCRREF+SAQALGGHMNVHRRDRAR
Sbjct: 10  PKKSNKESSWEELAFAED--DAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRAR 69

Query: 64  LHQAPSNAIKPFSSSSSSSSSTSNSFIIPAHDFNGGGLCVLYPFPNPYSIRSPSSLFSMS 123
           L QA    + P SSSS    S  +S  I  H+ +   L V    PN Y     S +  +S
Sbjct: 70  LKQADDQYLFPKSSSSPEYPSHKDSDNI--HETSCYTL-VFNTKPN-YFKTQHSCVIDLS 129

Query: 124 HHSFNNFMPSTSPASAFPIRNHRAGASSFPQSLSDEQAMES 165
             S   ++  +  +S  P + H    SS P S   E +  S
Sbjct: 130 SSSSLPYLTPSRVSSGLPGKQH---TSSSPPSFVVEPSKNS 161

[Close]

BLAST of CmoCh02G016500 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 )

HSP 1 Score: 85.5 bits (210), Expect = 5.4e-17
Identity = 44/70 (62.86%), Postives = 53/70 (75.71%), Query Frame = 0


Query: 30  WPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQAPSNAIKP------------FSS 88
           WPP++YTC+FCRREFRSAQALGGHMNVHRRDRA+L Q PS   +P            FSS
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNPNFSS 103

[Close]

BLAST of CmoCh02G016500 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 82.4 bits (202), Expect = 4.6e-16
Identity = 56/129 (43.41%), Postives = 68/129 (52.71%), Query Frame = 0


Query: 20  EDTADVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQAPSNAIKPFSSSS 79
           +D   ++G +WPPRSYTC+FC+REFRSAQALGGHMNVHRRDRARL              S
Sbjct: 32  QDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR----------LQQS 91

Query: 80  SSSSSTSNSFIIPAHDFNGGGLCVLYPFPNPYSIRSPSSLFSMSHHSFNNFMPSTSPASA 139
            SSSST +                  P+PNP    S  +     HHS     P+ SP S+
Sbjct: 92  PSSSSTPSP-----------------PYPNPNYSYSTMANSPPPHHSPLTLFPTLSPPSS 130

Query: 140 FPIRNHRAG 149
                +RAG
Sbjct: 152 ---PRYRAG 130

[Close]

BLAST of CmoCh02G016500 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-14
Identity = 41/70 (58.57%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 14 EVRAF--AEDTADVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQAPSNA 73
          E RAF  AE+     G  WPPRSY+C+FC REF+SAQALGGHMNVHRRDRARL Q    +
Sbjct: 32 EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQ---QS 91

Query: 74 IKPFSSSSSS 82
          + P S+  ++
Sbjct: 92 LSPSSTDQAT 98

The following BLAST results are available for this feature:

BLAST of CmoCh02G016500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80942	1.3e-18	44.72	Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1	[more]
Q9SLB8	7.6e-16	62.86	Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1	[more]
Q38895	6.5e-15	43.41	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S...	[more]
Q9LHS9	1.6e-13	58.57	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9SR34	1.0e-07	73.53	Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1	[more]

BLAST of CmoCh02G016500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EYW0	5.5e-110	100.00	zinc finger protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111437469 PE=4 S...	[more]
A0A6J1K623	9.1e-105	96.17	transcriptional regulator SUPERMAN-like OS=Cucurbita maxima OX=3661 GN=LOC111491...	[more]
A0A6J1E087	3.0e-63	67.31	transcriptional regulator SUPERMAN-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A5D3E693	6.6e-63	65.35	Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3CRJ1	6.6e-63	65.35	transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103503534 ...	[more]

BLAST of CmoCh02G016500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17810.1	2.7e-24	40.51	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G37740.1	8.9e-20	44.72	zinc-finger protein 10	[more]
AT2G42410.1	5.4e-17	62.86	zinc finger protein 11	[more]
AT3G23130.1	4.6e-16	43.41	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G06070.1	1.1e-14	58.57	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 35..57 e-value: 0.0066 score: 25.7
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 37..57
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 35..62 score: 11.156685
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 26..89 e-value: 1.5E-5 score: 26.7
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 35..59 e-value: 3.9E-6 score: 26.7
None	No IPR available	PANTHER	PTHR45801	OS07G0101800 PROTEIN	coord: 7..178
None	No IPR available	PANTHER	PTHR45801:SF5	OS07G0101800 PROTEIN	coord: 7..178
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 32..62

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G016500.1	CmoCh02G016500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007155	cell adhesion
biological_process	GO:0019062	virion attachment to host cell