CmoCh02G016120 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAACATTGTTTCTCACAGAACAAACAACTGGGTTGTCCCACTGCAGAGCCGATCCAACCACATTGGCTCGAACGGTGAGCGGGAACACTCGAGGCCATCTTTCGGTTCCATACGACCTCAGAGCTTCTTCAACAGAAGGTGCTTCCGACTTGAGTGCAGTGGCCAGTTTTCTTGCTAGAACCACTGCATCTTCTAATGCACAGCATGCTCCTTGTCCTAGATTTGGAGTCATCGGATGCCAGGCATCTCCAACCAGGACCACTCTTCCCGATGAAGCGGGCGGGCTGACTGCAGGCCAAAGCCATCGGTCTACGAGGGGTGTTCGGATTAACGTGTCCTCCGGGGTTGTGTCCATGATGTTTAGTAGCTCAGATGGCCAGTTTTTTACCAGTTCTTTCGCTTGCTGCTTTAGAACAGCTGGATCTGTGATTTTTGGTCCTGCAATGTGAGACACCACCAATTTTGATCTGAGTTTAATATGTCGACCCTATCGATCGGATACCGAAAATATGGTAACTTTTAACAGATAAAAGTGCCAGGAATCGAGTTCGAGGAATGGGAATGAGAAATGCAAACCTGGAGATGAGCTGTTGTAGCAGACAAACCAGTAAACTTTTGTAG ATGACAACATTGTTTCTCACAGAACAAACAACTGGGTTGTCCCACTGCAGAGCCGATCCAACCACATTGGCTCGAACGGTGAGCGGGAACACTCGAGGCCATCTTTCGGTTCCATACGACCTCAGAGCTTCTTCAACAGAAGGTGCTTCCGACTTGAGTGCAGTGGCCAGTTTTCTTGCTAGAACCACTGCATCTTCTAATGCACAGCATGCTCCTTGTCCTAGATTTGGAGTCATCGGATGCCAGGCATCTCCAACCAGGACCACTCTTCCCGATGAAGCGGGCGGGCTGACTGCAGGCCAAAGCCATCGGTCTACGAGGGGTGTTCGGATTAACGTGTCCTCCGGGGTTGTGTCCATGATGTTTAGTAGCTCAGATGGCCAGTTTTTTACCAGTTCTTTCGCTTGCTGCTTTAGAACAGCTGGATCTGTGATTTTTGGTCCTGCAATGAATCGAGTTCGAGGAATGGGAATGAGAAATGCAAACCTGGAGATGAGCTGTTGTAGCAGACAAACCAGTAAACTTTTGTAG ATGACAACATTGTTTCTCACAGAACAAACAACTGGGTTGTCCCACTGCAGAGCCGATCCAACCACATTGGCTCGAACGGTGAGCGGGAACACTCGAGGCCATCTTTCGGTTCCATACGACCTCAGAGCTTCTTCAACAGAAGGTGCTTCCGACTTGAGTGCAGTGGCCAGTTTTCTTGCTAGAACCACTGCATCTTCTAATGCACAGCATGCTCCTTGTCCTAGATTTGGAGTCATCGGATGCCAGGCATCTCCAACCAGGACCACTCTTCCCGATGAAGCGGGCGGGCTGACTGCAGGCCAAAGCCATCGGTCTACGAGGGGTGTTCGGATTAACGTGTCCTCCGGGGTTGTGTCCATGATGTTTAGTAGCTCAGATGGCCAGTTTTTTACCAGTTCTTTCGCTTGCTGCTTTAGAACAGCTGGATCTGTGATTTTTGGTCCTGCAATGAATCGAGTTCGAGGAATGGGAATGAGAAATGCAAACCTGGAGATGAGCTGTTGTAGCAGACAAACCAGTAAACTTTTGTAG MTTLFLTEQTTGLSHCRADPTTLARTVSGNTRGHLSVPYDLRASSTEGASDLSAVASFLARTTASSNAQHAPCPRFGVIGCQASPTRTTLPDEAGGLTAGQSHRSTRGVRINVSSGVVSMMFSSSDGQFFTSSFACCFRTAGSVIFGPAMNRVRGMGMRNANLEMSCCSRQTSKLL Homology
BLAST of CmoCh02G016120 vs. ExPASy TrEMBL
Match: A0A2P2K8D8 (Zeaxanthin epoxidaseic-like OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 6.7e-48 Identity = 109/163 (66.87%), Postives = 124/163 (76.07%), Query Frame = 0
BLAST of CmoCh02G016120 vs. ExPASy TrEMBL
Match: A0A1Q3AZY0 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_04843 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41 Identity = 96/146 (65.75%), Postives = 110/146 (75.34%), Query Frame = 0
BLAST of CmoCh02G016120 vs. ExPASy TrEMBL
Match: A0A498JTC4 (Fe2OG dioxygenase domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_035841 PE=3 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 1.5e-31 Identity = 76/104 (73.08%), Postives = 81/104 (77.88%), Query Frame = 0
BLAST of CmoCh02G016120 vs. ExPASy TrEMBL
Match: A0A5A7PR50 (Acyl-CoA synthetase/AMP-acid ligaseII OS=Striga asiatica OX=4170 GN=STAS_11022 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 2.6e-31 Identity = 88/149 (59.06%), Postives = 95/149 (63.76%), Query Frame = 0
BLAST of CmoCh02G016120 vs. ExPASy TrEMBL
Match: A0A7J6EQS5 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_015095 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29 Identity = 74/101 (73.27%), Postives = 81/101 (80.20%), Query Frame = 0
BLAST of CmoCh02G016120 vs. NCBI nr
Match: GAV61316.1 (hypothetical protein CFOL_v3_04843 [Cephalotus follicularis]) HSP 1 Score: 179.5 bits (454), Expect = 2.5e-41 Identity = 96/146 (65.75%), Postives = 110/146 (75.34%), Query Frame = 0
BLAST of CmoCh02G016120 vs. NCBI nr
Match: RXH97173.1 (hypothetical protein DVH24_035841 [Malus domestica]) HSP 1 Score: 146.0 bits (367), Expect = 3.1e-31 Identity = 76/104 (73.08%), Postives = 81/104 (77.88%), Query Frame = 0
BLAST of CmoCh02G016120 vs. NCBI nr
Match: GER34767.1 (acyl-CoA synthetase/AMP-acid ligaseII [Striga asiatica]) HSP 1 Score: 145.2 bits (365), Expect = 5.3e-31 Identity = 88/149 (59.06%), Postives = 95/149 (63.76%), Query Frame = 0
BLAST of CmoCh02G016120 vs. NCBI nr
Match: KAF4360772.1 (hypothetical protein F8388_015095 [Cannabis sativa]) HSP 1 Score: 139.8 bits (351), Expect = 2.2e-29 Identity = 74/101 (73.27%), Postives = 81/101 (80.20%), Query Frame = 0
BLAST of CmoCh02G016120 vs. NCBI nr
Match: KAF4395364.1 (hypothetical protein G4B88_010828, partial [Cannabis sativa]) HSP 1 Score: 139.8 bits (351), Expect = 2.2e-29 Identity = 74/101 (73.27%), Postives = 81/101 (80.20%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|