CmoCh02G015100 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTCCAAACCCCAATTCCTCCTTCCTCCTCCTCTTCCTCGTCACAATTCTCCTCACCACCGCCTCTCTCTCCGCCGCCGACACACAACAACCGCCGAATGATTCTCTCCAACCACCTACCTCTTCAACATTTTCACTCCCAAAGTCGCCGCCCGCCGTCGAGGACGTCATCGCACCCCAATACCACGCCGTTTCACTCCGCAAAGTCCCCGCCGGTCCAAACCCACTTCATAACTAA ATGGCTTCTCCAAACCCCAATTCCTCCTTCCTCCTCCTCTTCCTCGTCACAATTCTCCTCACCACCGCCTCTCTCTCCGCCGCCGACACACAACAACCGCCGAATGATTCTCTCCAACCACCTACCTCTTCAACATTTTCACTCCCAAAGTCGCCGCCCGCCGTCGAGGACGTCATCGCACCCCAATACCACGCCGTTTCACTCCGCAAAGTCCCCGCCGGTCCAAACCCACTTCATAACTAA ATGGCTTCTCCAAACCCCAATTCCTCCTTCCTCCTCCTCTTCCTCGTCACAATTCTCCTCACCACCGCCTCTCTCTCCGCCGCCGACACACAACAACCGCCGAATGATTCTCTCCAACCACCTACCTCTTCAACATTTTCACTCCCAAAGTCGCCGCCCGCCGTCGAGGACGTCATCGCACCCCAATACCACGCCGTTTCACTCCGCAAAGTCCCCGCCGGTCCAAACCCACTTCATAACTAA MASPNPNSSFLLLFLVTILLTTASLSAADTQQPPNDSLQPPTSSTFSLPKSPPAVEDVIAPQYHAVSLRKVPAGPNPLHN Homology
BLAST of CmoCh02G015100 vs. ExPASy TrEMBL
Match: A0A5A7THA6 (F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002830 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.1e-12 Identity = 48/85 (56.47%), Postives = 55/85 (64.71%), Query Frame = 0
BLAST of CmoCh02G015100 vs. ExPASy TrEMBL
Match: A0A0A0KKA9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154870 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.9e-11 Identity = 51/90 (56.67%), Postives = 58/90 (64.44%), Query Frame = 0
BLAST of CmoCh02G015100 vs. NCBI nr
Match: KAG6606114.1 (Methyl-CpG-binding domain-containing protein 13, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 136.0 bits (341), Expect = 1.5e-28 Identity = 72/74 (97.30%), Postives = 72/74 (97.30%), Query Frame = 0
BLAST of CmoCh02G015100 vs. NCBI nr
Match: KAA0042782.1 (F-box/LRR-repeat protein [Cucumis melo var. makuwa]) HSP 1 Score: 81.3 bits (199), Expect = 4.3e-12 Identity = 48/85 (56.47%), Postives = 55/85 (64.71%), Query Frame = 0
BLAST of CmoCh02G015100 vs. NCBI nr
Match: KGN50125.1 (hypothetical protein Csa_000058 [Cucumis sativus]) HSP 1 Score: 77.0 bits (188), Expect = 8.1e-11 Identity = 51/90 (56.67%), Postives = 58/90 (64.44%), Query Frame = 0
BLAST of CmoCh02G015100 vs. NCBI nr
Match: KAG6579492.1 (hypothetical protein SDJN03_23940, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 71.6 bits (174), Expect = 3.4e-09 Identity = 46/85 (54.12%), Postives = 53/85 (62.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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