CmoCh02G014980 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G014980
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ribosomal L1 domain-containing protein 1-like
Location	Cmo_Chr02: 8759214 .. 8760368 (+)
RNA-Seq Expression	CmoCh02G014980
Synteny	CmoCh02G014980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCGCCGGATTCTGATACTCTCTCTTCTAGAGTTCGTCGGGAAACGGCGGAGAAAGCCGTCGAATCGCTCCTTCAATGGCGAAGTTCCAAACGAGAGAAGCCCCAACTTCTGGACCAGGAGGATTTTTTATACCTCGTCGTTACTCTCAAGAAAATCCCTCCAAAAGGTCGTACAAACCCTTACAAAATCCCTCTTCCCCATCCTCTTCGTTCTGAATCGTCTGAACTCTGCCTCATAATCGACGATAGAACCAAGTCCAATCTTACCAAAGACGACGCCAGGAAGAAAATCCAGTCGGAAAACATCCCGATTTCGAAGGTCATCAAGCTGTCGAAGCTTAAATCCGATTACCGCCCCTTTGAAGCTAAACGGAAGCTCTGCGATTCGTACGATATGTTTTTCGCCGATGATCGGGTTATTCCAATGCTGCCAAGTCTGTTGGGGAAGCACTTTTACAAGAAGAAAAAAATTCCAGTGCCGTTGAATTTGAGGCATAAGAATTGGAAAGAACAGATCGAGAAGAGCTGTTCGTCGGCTTTGTTGTATTTGCGGAGAGGGACTTGTAGTGTGGTGAAAGTGGCAAAGACGTCAATGGAAGTTGAAGAGATCGTGAATAATGTGATTGCGGCGATTGATGGGATTGCAGAGATTGTGCCTAAGAAATGGAGCAATGTGCAATCATTTCATTTGAAGGTCCTGGAATCTATTGCATTGCCACTTTACCAAACAGTGCCGGAGTTGAAAATGAAGATTGAGGCGGCCGTGAGGGGTAAAGAAGAGGAAACAAACAAAGAAGTAGCAGATGCAGGTAAGAGTCCTACTCCTGTAAAGGTCTCTAACAAAAAGGAGAAGAAGTTGGGCAAGAAGAAGGGGAGGATACATGAAGTTCGTTATATGGACAGTAATGGCTTAAAGCTATCTGAAGAAGAAGATGAACAGGACAGTGATGTTGATGAGGTTAGTGAGAATATCGAAAAGGGTAAGAAACGGAGTAGAGTAAAGAAAGCGAAGGAAGAGCTTCAAAGTGAGTTGAATGTCGAGAAAACATCGAAGAAGAAGAAGAAGAAGAAGAAGAATGGAGATGAAGAATCCAGTGGAATAGAAATCCACCAAGTACGACTCAATAAAGGAAACTTCAGTTGTTTCTAG

mRNA sequence

ATGGCTTCGCCGGATTCTGATACTCTCTCTTCTAGAGTTCGTCGGGAAACGGCGGAGAAAGCCGTCGAATCGCTCCTTCAATGGCGAAGTTCCAAACGAGAGAAGCCCCAACTTCTGGACCAGGAGGATTTTTTATACCTCGTCGTTACTCTCAAGAAAATCCCTCCAAAAGGTCGTACAAACCCTTACAAAATCCCTCTTCCCCATCCTCTTCGTTCTGAATCGTCTGAACTCTGCCTCATAATCGACGATAGAACCAAGTCCAATCTTACCAAAGACGACGCCAGGAAGAAAATCCAGTCGGAAAACATCCCGATTTCGAAGGTCATCAAGCTGTCGAAGCTTAAATCCGATTACCGCCCCTTTGAAGCTAAACGGAAGCTCTGCGATTCGTACGATATGTTTTTCGCCGATGATCGGGTTATTCCAATGCTGCCAAGTCTGTTGGGGAAGCACTTTTACAAGAAGAAAAAAATTCCAGTGCCGTTGAATTTGAGGCATAAGAATTGGAAAGAACAGATCGAGAAGAGCTGTTCGTCGGCTTTGTTGTATTTGCGGAGAGGGACTTGTAGTGTGGTGAAAGTGGCAAAGACGTCAATGGAAGTTGAAGAGATCGTGAATAATGTGATTGCGGCGATTGATGGGATTGCAGAGATTGTGCCTAAGAAATGGAGCAATGTGCAATCATTTCATTTGAAGGTCCTGGAATCTATTGCATTGCCACTTTACCAAACAGTGCCGGAGTTGAAAATGAAGATTGAGGCGGCCGTGAGGGGTAAAGAAGAGGAAACAAACAAAGAAGTAGCAGATGCAGGTAAGAGTCCTACTCCTGTAAAGGTCTCTAACAAAAAGGAGAAGAAGTTGGGCAAGAAGAAGGGGAGGATACATGAAGTTCGTTATATGGACAGTAATGGCTTAAAGCTATCTGAAGAAGAAGATGAACAGGACAGTGATGTTGATGAGGTTAGTGAGAATATCGAAAAGGGTAAGAAACGGAGTAGAGTAAAGAAAGCGAAGGAAGAGCTTCAAAGTGAGTTGAATGTCGAGAAAACATCGAAGAAGAAGAAGAAGAAGAAGAAGAATGGAGATGAAGAATCCAGTGGAATAGAAATCCACCAAGTACGACTCAATAAAGGAAACTTCAGTTGTTTCTAG

Coding sequence (CDS)

ATGGCTTCGCCGGATTCTGATACTCTCTCTTCTAGAGTTCGTCGGGAAACGGCGGAGAAAGCCGTCGAATCGCTCCTTCAATGGCGAAGTTCCAAACGAGAGAAGCCCCAACTTCTGGACCAGGAGGATTTTTTATACCTCGTCGTTACTCTCAAGAAAATCCCTCCAAAAGGTCGTACAAACCCTTACAAAATCCCTCTTCCCCATCCTCTTCGTTCTGAATCGTCTGAACTCTGCCTCATAATCGACGATAGAACCAAGTCCAATCTTACCAAAGACGACGCCAGGAAGAAAATCCAGTCGGAAAACATCCCGATTTCGAAGGTCATCAAGCTGTCGAAGCTTAAATCCGATTACCGCCCCTTTGAAGCTAAACGGAAGCTCTGCGATTCGTACGATATGTTTTTCGCCGATGATCGGGTTATTCCAATGCTGCCAAGTCTGTTGGGGAAGCACTTTTACAAGAAGAAAAAAATTCCAGTGCCGTTGAATTTGAGGCATAAGAATTGGAAAGAACAGATCGAGAAGAGCTGTTCGTCGGCTTTGTTGTATTTGCGGAGAGGGACTTGTAGTGTGGTGAAAGTGGCAAAGACGTCAATGGAAGTTGAAGAGATCGTGAATAATGTGATTGCGGCGATTGATGGGATTGCAGAGATTGTGCCTAAGAAATGGAGCAATGTGCAATCATTTCATTTGAAGGTCCTGGAATCTATTGCATTGCCACTTTACCAAACAGTGCCGGAGTTGAAAATGAAGATTGAGGCGGCCGTGAGGGGTAAAGAAGAGGAAACAAACAAAGAAGTAGCAGATGCAGGTAAGAGTCCTACTCCTGTAAAGGTCTCTAACAAAAAGGAGAAGAAGTTGGGCAAGAAGAAGGGGAGGATACATGAAGTTCGTTATATGGACAGTAATGGCTTAAAGCTATCTGAAGAAGAAGATGAACAGGACAGTGATGTTGATGAGGTTAGTGAGAATATCGAAAAGGGTAAGAAACGGAGTAGAGTAAAGAAAGCGAAGGAAGAGCTTCAAAGTGAGTTGAATGTCGAGAAAACATCGAAGAAGAAGAAGAAGAAGAAGAAGAATGGAGATGAAGAATCCAGTGGAATAGAAATCCACCAAGTACGACTCAATAAAGGAAACTTCAGTTGTTTCTAG

Protein sequence

MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRTNPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSSALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIALPLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRYMDSNGLKLSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKKKKKKKKNGDEESSGIEIHQVRLNKGNFSCF

Homology

[Close]

BLAST of CmoCh02G014980 vs. ExPASy Swiss-Prot
Match: Q8BVY0 (Ribosomal L1 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rsl1d1 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.7e-35
Identity = 95/278 (34.17%), Postives = 162/278 (58.27%), Query Frame = 0


Query: 15  RETAEKAVESLLQWRSSKREKPQ-LLDQEDFLYLVVTLKKIPPKGRTNPYKIPLPHPLRS 74
           RE   KAVE +     SK+   + LL   + L+L+V L KIP K      K+PLPH + S
Sbjct: 33  REQIRKAVEVISNRSKSKKNNNELLLSGSENLFLMVILWKIPEKELR--VKVPLPHSILS 92

Query: 75  ESSELCLIIDDRTKSNLTKDDARKKIQSEN--IPISKVIKLSKLKSDYRPFEAKRKLCDS 134
           ESS++CL   D   S    +   KK+  ++    IS++I    LK++Y+ +EAK +L  S
Sbjct: 93  ESSDVCLFTKDEFDSPEQTEGFYKKLLKKHGVNTISQIIPFKTLKTEYKAYEAKLRLLGS 152

Query: 135 YDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSSALLYL-RRGTC 194
           +++F  D R+   LPS +G+HFY++KK+PV +NL  KN  ++I +  +  +L + +RG+C
Sbjct: 153 FEVFITDARIRRHLPSHIGRHFYQRKKVPVSVNLLAKNLSKEINRCITGTVLNISKRGSC 212

Query: 195 SVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIALPLYQTVPELK 254
           S +++  T ME E IV+N++A  + ++E +P+KW +V+   LK  +S++LP++ +    +
Sbjct: 213 STIRIGHTGMETEHIVDNILAVSEMLSEKLPEKWQSVKLLFLKTEKSVSLPIFSSFVTSQ 272

Query: 255 MKIEAAVRG-KEEETNKEVADAGKSPTPVKVSNKKEKK 288
            +   ++R  +++E  K   +  K     K+  KK KK
Sbjct: 273 DENAVSLRSLRKQELKKRKRENAKLKKESKMLRKKSKK 308

[Close]

BLAST of CmoCh02G014980 vs. ExPASy Swiss-Prot
Match: O76021 (Ribosomal L1 domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RSL1D1 PE=1 SV=3)

HSP 1 Score: 141.7 bits (356), Expect = 1.7e-32
Identity = 101/347 (29.11%), Postives = 182/347 (52.45%), Query Frame = 0


Query: 2   ASPDSDTLSSRVRRETAEKAVESLL-QWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 61
           ++P + T   ++ +E   KAV++LL   +S K     LL++ + L+L+V L KIP K   
Sbjct: 20  STPAAPTARKQLDKEQVRKAVDALLTHCKSRKNNYGLLLNENESLFLMVVLWKIPSKELR 79

Query: 62  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDA--RKKIQSENI-PISKVIKLSKLKS 121
              ++ LPH +RS+S ++CL   D   S   K +   RK +    I  +S++I L  LK 
Sbjct: 80  --VRLTLPHSIRSDSEDICLFTKDEPNSTPEKTEQFYRKLLNKHGIKTVSQIISLQTLKK 139

Query: 122 DYRPFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKS 181
           +Y+ +EAK +L  S+D F  D R+  +LPSL+G+HFY++KK+PV +NL  KN   +I   
Sbjct: 140 EYKSYEAKLRLLSSFDFFLTDARIRRLLPSLIGRHFYQRKKVPVSVNLLSKNLSREINDC 199

Query: 182 CSSALLYL-RRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLE 241
               +L + + G+CS +++    M++E I+ N++A   G++E +P+KW +V+   +K  +
Sbjct: 200 IGGTVLNISKSGSCSAIRIGHVGMQIEHIIENIVAVTKGLSEKLPEKWESVKLLFVKTEK 259

Query: 242 SIALPLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIH 301
           S ALP++ +           V   +E T + + +  K     K   +  +K  ++K +  
Sbjct: 260 SAALPIFSSF----------VSNWDEATKRSLLNKKKKEARRKRRERNFEKQKERKKKRQ 319

Query: 302 EVRYMDSNGLKLSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQ 344
           + R   S   K     +  D+ V +     E+  +  + K+ + + Q
Sbjct: 320 QARKTASVLSKDDVAPESGDTTVKKPESKKEQTPEHGKKKRGRGKAQ 354

[Close]

BLAST of CmoCh02G014980 vs. ExPASy Swiss-Prot
Match: Q5RCE6 (Ribosomal L1 domain-containing protein 1 OS=Pongo abelii OX=9601 GN=RSL1D1 PE=2 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 1.7e-32
Identity = 101/347 (29.11%), Postives = 182/347 (52.45%), Query Frame = 0


Query: 2   ASPDSDTLSSRVRRETAEKAVESLL-QWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 61
           ++P + T   ++ +E   KAV++LL   +S K     LL++ + L+L+V L KIP K   
Sbjct: 20  STPAAPTARKQLDKEQVRKAVDALLTHCKSRKNNYGLLLNENESLFLMVVLWKIPSKELR 79

Query: 62  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDA--RKKIQSENI-PISKVIKLSKLKS 121
              ++ LPH +RS+S ++CL   D   S   K +   RK +    I  +S++I L  LK 
Sbjct: 80  --VRLTLPHSIRSDSEDICLFTKDEPNSTPEKTEQFYRKLLNKHGIKTVSQIISLQTLKK 139

Query: 122 DYRPFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKS 181
           +Y+ +EAK +L  S+D F  D R+  +LPSL+G+HFY++KK+PV +NL  KN   +I   
Sbjct: 140 EYKSYEAKLRLLSSFDFFLTDARIRRLLPSLIGRHFYQRKKVPVSVNLLSKNLSREINDC 199

Query: 182 CSSALLYL-RRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLE 241
               +L + + G+CS +++    M++E I+ N++A   G++E +P+KW +V+   +K  +
Sbjct: 200 IGGTVLNISKSGSCSAIRIGHVGMQIEHIIENIVAVTKGLSEKLPEKWESVKLLFVKTEK 259

Query: 242 SIALPLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIH 301
           S ALP++ +           V   +E T + + +  K     K   +  +K  ++K +  
Sbjct: 260 SAALPIFSSF----------VSNWDEATKRSLLNKKKKEARRKRRERNFEKQKERKKKRQ 319

Query: 302 EVRYMDSNGLKLSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQ 344
           + R   S   K     +  D+ V +     E+  +  + K+ + + Q
Sbjct: 320 QARKTASVLSKDDVAPESGDTTVKKPESKKEQTPEHGKKKRGRGKAQ 354

[Close]

BLAST of CmoCh02G014980 vs. ExPASy Swiss-Prot
Match: A4FV97 (Ribosomal L1 domain-containing protein 1 OS=Bos taurus OX=9913 GN=RSL1D1 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.6e-30
Identity = 93/302 (30.79%), Postives = 166/302 (54.97%), Query Frame = 0


Query: 2   ASPDSDTLSSRVRRETAEKAVESLL-QWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 61
           ++P++     ++  E  +KAVE+LL   RS K     LL++ +  +L+V L KIP K   
Sbjct: 18  STPETPPGPEQLDEEQVKKAVEALLAHSRSRKNANGLLLNENENFFLMVVLWKIPSKELR 77

Query: 62  NPYKIPLPHPLRSESSELCLIIDD--RTKSNLTKDDARKKIQSENI-PISKVIKLSKLKS 121
              ++ LPH +RS+ +++CL   D     S  T+   +K + +  I  IS++I    LK 
Sbjct: 78  --VRLSLPHGIRSDLADVCLFTKDEPNLSSEQTERYYKKLLNNHGIKTISQIIPFRTLKK 137

Query: 122 DYRPFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKS 181
           +Y+ +EAK +L  S+D F  D R+  +LPS LG+HFY +KK+PV +NL+ K    +I   
Sbjct: 138 EYKAYEAKLRLLGSFDFFITDARIRRLLPSHLGRHFYNRKKVPVSVNLQSKTLSREINDC 197

Query: 182 CSSALLYL-RRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLE 241
               +L + + G+CS +++  T M ++ IV NV+A    +++ +P+KW +V+   +K   
Sbjct: 198 IGGTVLNISKSGSCSTIRIGHTGMPIQHIVENVVAVAKSLSQKLPEKWESVKLLFVKTER 257

Query: 242 SIALPLYQTVPELKMKIEAAVRG-KEEETNKEVADAGKSPTP---VKVSNKKEKKLGKKK 295
           S++LP++ +     +  +   +G +  +  K+V+   +  T     +   KKEKKL K+ 
Sbjct: 258 SVSLPVFSSF----VSSQGEAKGLRTRDLLKKVSKKSRKKTERALKRQQEKKEKKLLKQA 313

[Close]

BLAST of CmoCh02G014980 vs. ExPASy Swiss-Prot
Match: Q9UT32 (Putative ribosome biogenesis protein C8F11.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC8F11.04 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.9e-24
Identity = 121/374 (32.35%), Postives = 192/374 (51.34%), Query Frame = 0


Query: 3   SPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLL-DQEDFLYLV----VTLKKIPPK 62
           +P     S+ +  E+  K+ E++     S+ +K  LL D++D +  V     TLK I   
Sbjct: 11  APLEKVCSALLEYESKRKSSENI----DSESKKTNLLEDEQDDIEPVWLQLATLKFIGNN 70

Query: 63  GRTNPYKIPLPHPLRSESSELCLIIDD--RTKSNLTKDDARKKIQSENIPISKVIKLSKL 122
            +  PYKI + +P+   SSE CLI+ D  R   +L  +    K+      +++VI LSKL
Sbjct: 71  RKLIPYKIAIKNPVIPSSSEACLIVKDPQRVYKDLVNEAGLSKV------VTRVIGLSKL 130

Query: 123 KSDYRPFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIE 182
           K+ +  +E KR+L D +D+F ADDRVIPMLP +LGK FY+K K+PVP+ +  K   EQ++
Sbjct: 131 KAKWNSYEQKRQLRDQFDIFLADDRVIPMLPRILGKTFYQKSKVPVPVKI-SKGTAEQLK 190

Query: 183 KSCSSA--LLYLRRGTCS--VVK---VAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQ 242
           +   SA    Y     CS  ++K   V+ TS E+ E V +++  +     IVP     + 
Sbjct: 191 REVVSAYGATYFNSAPCSSFMIKCGHVSNTSTELAENVESILQFVS--KHIVPDGAKGIA 250

Query: 243 SFHLKVLESIALPLYQTVPELKMKIEAA--VRGKEEETNKEVADAGKSPTPVKVSNKKEK 302
           S HLK  +SIA+PL+   P LK  I ++  V  KE  ++K  +D    P     S KK+K
Sbjct: 251 SIHLKTSQSIAIPLWNN-PNLKELIASSRKVVTKETASSKRKSDEESLP-----SQKKQK 310

Query: 303 KLGKKKGRIHEVRYMDSNGLKLSEEEDEQDSDVDEVSE--NIEKGKKRSRVKKAKEELQS 359
           K+   K      +   S+  +++ +E  +   V   ++  N ++  K  + K + +  QS
Sbjct: 311 KVEVAKESKDSKQQNVSDKKQVTVKEVPKKLSVKNAAKTTNRDEDSKGKKAKASPKVSQS 365

[Close]

BLAST of CmoCh02G014980 vs. ExPASy TrEMBL
Match: A0A6J1H2T1 (ribosomal L1 domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459842 PE=4 SV=1)

HSP 1 Score: 721.1 bits (1860), Expect = 2.5e-204
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0


Query: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60
           MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT
Sbjct: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60

Query: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSS 180
           PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSS 180

Query: 181 ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240
           ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL
Sbjct: 181 ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240

Query: 241 PLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRY 300
           PLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRY
Sbjct: 241 PLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRY 300

Query: 301 MDSNGLKLSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKKKKKKKK 360
           MDSNGLKLSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKKKKKKKK
Sbjct: 301 MDSNGLKLSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKKKKKKKK 360

Query: 361 NGDEESSGIEIHQVRLNKGNFSCF 385
           NGDEESSGIEIHQVRLNKGNFSCF
Sbjct: 361 NGDEESSGIEIHQVRLNKGNFSCF 384

[Close]

BLAST of CmoCh02G014980 vs. ExPASy TrEMBL
Match: A0A6J1K7W6 (ribosomal L1 domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491456 PE=4 SV=1)

HSP 1 Score: 661.4 bits (1705), Expect = 2.3e-186
Identity = 353/375 (94.13%), Postives = 363/375 (96.80%), Query Frame = 0


Query: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60
           MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT
Sbjct: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60

Query: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKK QSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKTQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSS 180
           PFEAKRKLC+SYDMFFADDRVIPMLPSLLGKHF+KKKKIPVPLNLRHKNWKEQIEKSCSS
Sbjct: 121 PFEAKRKLCESYDMFFADDRVIPMLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSS 180

Query: 181 ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240
           ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL
Sbjct: 181 ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240

Query: 241 PLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRY 300
           PLYQTVPELKMKIE+AVRGKEEETNKEVADAGK PTP+KVSNKKEKKLGKKKGRI EVRY
Sbjct: 241 PLYQTVPELKMKIESAVRGKEEETNKEVADAGKGPTPIKVSNKKEKKLGKKKGRIQEVRY 300

Query: 301 MDSNGLKLSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKKKKKKKK 360
           MDSNGLKLSEE+DEQDSDVDEVSENIEKGKKRSRVKKAKEELQSE+NVEKTS      KK
Sbjct: 301 MDSNGLKLSEEQDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSEMNVEKTS------KK 360

Query: 361 NGDEESSGIEIHQVR 376
           NGDEESSG ++ + +
Sbjct: 361 NGDEESSGKKVKKTK 369

[Close]

BLAST of CmoCh02G014980 vs. ExPASy TrEMBL
Match: A0A6J1ESQ8 (ribosomal L1 domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111435655 PE=4 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 8.1e-155
Identity = 306/372 (82.26%), Postives = 333/372 (89.52%), Query Frame = 0


Query: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60
           MAS DS  LSSRVRRETAEKAVESLLQWR+SKREKPQL DQEDFLYLVV LKKIPPKGRT
Sbjct: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT 60

Query: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPH  RS+SSE+CLIIDDR++SNLTKD+ARKKIQSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSS 180
           PFEAKRKLCDSYDMFFADDRVIP+LPSLLGKHFYKKKKIPVPLNLRHKNWKEQIE+SCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180

Query: 181 ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240
           ALLYLR GTCSVVKVAKTSMEVEEIV+NVIAAIDGIAEIVPKKWSNV+SFHLKVLESIAL
Sbjct: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240

Query: 241 PLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRY 300
           P+YQTVPELK+KI+AAV+G+E+ T KE  +AGKSPTPVKVSNKKEKK   KKGRIHEVRY
Sbjct: 241 PIYQTVPELKLKIDAAVKGEEKGTEKE-DEAGKSPTPVKVSNKKEKKSSMKKGRIHEVRY 300

Query: 301 MDSNGLKLSEEED-----EQDSDVDEVSENIEKG------KKRSRVKKAKEELQSELNVE 360
           MDSNG +LS+E+D     ++D D  EVSEN++KG      K RSRV K KEELQ++LN E
Sbjct: 301 MDSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSE 360

Query: 361 KTSKKKKKKKKN 362
           KT KK    KK+
Sbjct: 361 KTLKKSTVVKKD 371

[Close]

BLAST of CmoCh02G014980 vs. ExPASy TrEMBL
Match: A0A6J1HY99 (ribosomal L1 domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111469121 PE=4 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 6.8e-154
Identity = 306/372 (82.26%), Postives = 332/372 (89.25%), Query Frame = 0


Query: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60
           MAS DS  LSSRVRRETAEKAVESLLQWR+SKREKPQL D EDFLYLVV LKKIPPKGRT
Sbjct: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDLEDFLYLVVALKKIPPKGRT 60

Query: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPH LRS+SSE+CLIIDDR++SNLTKDDARKKIQSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHSLRSDSSEICLIIDDRSRSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSS 180
           PFEAKRKLCDSYDMFFADDRVIP+LPSLLGKHFYKKKKIPVPLNLRHKNWKEQIE+SCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180

Query: 181 ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240
           ALLYLR GTCSVVKVAKTSMEVEEIV+NVIAAIDGIAEIVPKKWSNV+SFHLKVLESIAL
Sbjct: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240

Query: 241 PLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRY 300
           P+YQTVPELK+KI+AAV+G E+ T KE  +AGKSPTPVKVSNKKEKK   KKGRIHEVRY
Sbjct: 241 PIYQTVPELKLKIDAAVKGDEKGTEKE-DEAGKSPTPVKVSNKKEKKSRMKKGRIHEVRY 300

Query: 301 MDSNGLKLSEEED-----EQDSDVDEVSENIEKG------KKRSRVKKAKEELQSELNVE 360
           MDSNG +LS+E+D     ++D D  EVSEN++KG      K RSRV K KEELQ++L+ E
Sbjct: 301 MDSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLSSE 360

Query: 361 KTSKKKKKKKKN 362
           KT KK    KK+
Sbjct: 361 KTLKKSTGVKKD 371

[Close]

BLAST of CmoCh02G014980 vs. ExPASy TrEMBL
Match: A0A6J1E0M1 (ribosomal L1 domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=LOC111026071 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 4.6e-150
Identity = 305/378 (80.69%), Postives = 334/378 (88.36%), Query Frame = 0


Query: 1   MASPDSDTL--SSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKG 60
           MASP S  +  SSRV ++TAEKAVESLLQWR+SKREKPQL DQEDFLYLVVTL+KIPPKG
Sbjct: 1   MASPGSVCVPPSSRVNQQTAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVTLRKIPPKG 60

Query: 61  RTNPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSD 120
           RTNPYKIPLPH L SESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSD
Sbjct: 61  RTNPYKIPLPHSLHSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSD 120

Query: 121 YRPFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSC 180
           YRPFEAKRKLCDSYDMFFADDRVIP+LPSLLGKHF+KKKKIPVPLNLRHKNWKEQIEKSC
Sbjct: 121 YRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSC 180

Query: 181 SSALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESI 240
           +SALLYLR GTCSVVKVAKTSMEVEEIV+NVIAAIDGIAEIVPKKWSNV+SFHLK+LESI
Sbjct: 181 ASALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKLLESI 240

Query: 241 ALPLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNK--KEKKLGKKKGRIH 300
           ALP+YQ+VP+LK KIEAA++G E++  +EV D+GKSPTPVKVSNK  KEKKL KKKGRIH
Sbjct: 241 ALPIYQSVPDLKFKIEAAMKG-EDKGIEEVEDSGKSPTPVKVSNKKEKEKKLSKKKGRIH 300

Query: 301 EVRYMDSNGLKLSEEEDEQDSDVDEVSENIE------------KGKKRSRVKKAKEE-LQ 360
           EVRYMDSNG +LS +EDE  SD+DE ++N++            KGKKRSRV K KEE LQ
Sbjct: 301 EVRYMDSNGGELS-DEDELGSDLDEDTDNVKVSEDVIMGSDELKGKKRSRVNKGKEEDLQ 360

Query: 361 SELNVEKTSKKKKKKKKN 362
           +ELNVEK  KK    KK+
Sbjct: 361 TELNVEKPLKKPISMKKD 376

[Close]

BLAST of CmoCh02G014980 vs. NCBI nr
Match: XP_022958691.1 (ribosomal L1 domain-containing protein 1-like [Cucurbita moschata])

HSP 1 Score: 721.1 bits (1860), Expect = 5.1e-204
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0


Query: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60
           MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT
Sbjct: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60

Query: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSS 180
           PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSS 180

Query: 181 ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240
           ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL
Sbjct: 181 ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240

Query: 241 PLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRY 300
           PLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRY
Sbjct: 241 PLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRY 300

Query: 301 MDSNGLKLSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKKKKKKKK 360
           MDSNGLKLSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKKKKKKKK
Sbjct: 301 MDSNGLKLSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKKKKKKKK 360

Query: 361 NGDEESSGIEIHQVRLNKGNFSCF 385
           NGDEESSGIEIHQVRLNKGNFSCF
Sbjct: 361 NGDEESSGIEIHQVRLNKGNFSCF 384

[Close]

BLAST of CmoCh02G014980 vs. NCBI nr
Match: XP_023521630.1 (ribosomal L1 domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 673.3 bits (1736), Expect = 1.2e-189
Identity = 364/378 (96.30%), Postives = 370/378 (97.88%), Query Frame = 0


Query: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60
           MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT
Sbjct: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60

Query: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSS 180
           PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHF+KKKKIPVPLNLRHKNWKEQIEKSCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSS 180

Query: 181 ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240
            LLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL
Sbjct: 181 GLLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240

Query: 241 PLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRY 300
           PLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKV+NKKEKKLGKKKGRIHEVRY
Sbjct: 241 PLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVNNKKEKKLGKKKGRIHEVRY 300

Query: 301 MDSNGLKLS-EEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKK--KKK 360
           MDSNGLKLS EEEDEQDSDVDEVSENIEKGKKRSRVKK KEELQSELNVEKTSKK  KKK
Sbjct: 301 MDSNGLKLSAEEEDEQDSDVDEVSENIEKGKKRSRVKKTKEELQSELNVEKTSKKKMKKK 360

Query: 361 KKKNGDEESSGIEIHQVR 376
           KKKNGDEESSG ++ + +
Sbjct: 361 KKKNGDEESSGKKVKKTK 378

[Close]

BLAST of CmoCh02G014980 vs. NCBI nr
Match: XP_023532538.1 (ribosomal L1 domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 672.2 bits (1733), Expect = 2.7e-189
Identity = 360/375 (96.00%), Postives = 367/375 (97.87%), Query Frame = 0


Query: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60
           MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT
Sbjct: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60

Query: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSS 180
           PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHF+KKKKIPVPLNLRHKNWKEQIEKSCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSS 180

Query: 181 ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240
            LLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL
Sbjct: 181 GLLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240

Query: 241 PLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRY 300
           PLYQTVPELKMKIEAAVRGKEEETNKE+ADAGKSPTPVKV+NKKEKKLGKKKGRIHEVRY
Sbjct: 241 PLYQTVPELKMKIEAAVRGKEEETNKEIADAGKSPTPVKVNNKKEKKLGKKKGRIHEVRY 300

Query: 301 MDSNGLKLSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKKKKKKKK 360
           MDSNGLKLSEEEDEQDSDVDEVSENIEKGKK SRVKK KEELQSELNVEKTS  KKKKKK
Sbjct: 301 MDSNGLKLSEEEDEQDSDVDEVSENIEKGKKWSRVKKTKEELQSELNVEKTS--KKKKKK 360

Query: 361 NGDEESSGIEIHQVR 376
           NGDEESSG ++ + +
Sbjct: 361 NGDEESSGKKVKKTK 373

[Close]

BLAST of CmoCh02G014980 vs. NCBI nr
Match: XP_022996144.1 (ribosomal L1 domain-containing protein 1-like [Cucurbita maxima])

HSP 1 Score: 661.4 bits (1705), Expect = 4.8e-186
Identity = 353/375 (94.13%), Postives = 363/375 (96.80%), Query Frame = 0


Query: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60
           MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT
Sbjct: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60

Query: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKK QSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKTQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSS 180
           PFEAKRKLC+SYDMFFADDRVIPMLPSLLGKHF+KKKKIPVPLNLRHKNWKEQIEKSCSS
Sbjct: 121 PFEAKRKLCESYDMFFADDRVIPMLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSS 180

Query: 181 ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240
           ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL
Sbjct: 181 ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240

Query: 241 PLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRY 300
           PLYQTVPELKMKIE+AVRGKEEETNKEVADAGK PTP+KVSNKKEKKLGKKKGRI EVRY
Sbjct: 241 PLYQTVPELKMKIESAVRGKEEETNKEVADAGKGPTPIKVSNKKEKKLGKKKGRIQEVRY 300

Query: 301 MDSNGLKLSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKKKKKKKK 360
           MDSNGLKLSEE+DEQDSDVDEVSENIEKGKKRSRVKKAKEELQSE+NVEKTS      KK
Sbjct: 301 MDSNGLKLSEEQDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSEMNVEKTS------KK 360

Query: 361 NGDEESSGIEIHQVR 376
           NGDEESSG ++ + +
Sbjct: 361 NGDEESSGKKVKKTK 369

[Close]

BLAST of CmoCh02G014980 vs. NCBI nr
Match: KAG7036050.1 (Ribosomal L1 domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 658.7 bits (1698), Expect = 3.1e-185
Identity = 355/378 (93.92%), Postives = 365/378 (96.56%), Query Frame = 0


Query: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60
           MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT
Sbjct: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60

Query: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSS 180
           PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHF+KKKKIPVPLNLRHKNWKEQIEKSCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSS 180

Query: 181 ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240
           ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL
Sbjct: 181 ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240

Query: 241 PLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRY 300
           PLYQTVPELKMKIEAAVRGKEEETNKEVAD GKSPTPVKV+NKKEKKLGKKKGRIHEVRY
Sbjct: 241 PLYQTVPELKMKIEAAVRGKEEETNKEVADTGKSPTPVKVNNKKEKKLGKKKGRIHEVRY 300

Query: 301 MDSNGLKLSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKK---KKK 360
           MDSNGLKLSEE+DEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKK    K+
Sbjct: 301 MDSNGLKLSEEQDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKKMDSDKQ 360

Query: 361 KKKNGDEESSGIEIHQVR 376
           KK +G +     ++ +V+
Sbjct: 361 KKSSGKKVKKTEKLKEVK 378

[Close]

BLAST of CmoCh02G014980 vs. TAIR 10
Match: AT3G58660.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 347.1 bits (889), Expect = 1.9e-95
Identity = 204/365 (55.89%), Postives = 260/365 (71.23%), Query Frame = 0


Query: 10  SSRVRRETAEKAVESLLQWRS--SKREKPQLLDQEDFLYLVVTLKKIPPKGRTNPYKIPL 69
           +SRV  +T E A+  L+ WRS  SK EKPQLL++++ +YL VTLKKIP K RTN Y+IPL
Sbjct: 21  TSRVSPKTVESALNGLINWRSDKSKTEKPQLLEEDELVYLFVTLKKIPQKTRTNAYRIPL 80

Query: 70  PHPLRS---ESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEA 129
           PHPL +   +S E+CLIIDDR KS LTKDDA KKI+SENIPI+KVIKLSKLKSDY+ FEA
Sbjct: 81  PHPLINPTVDSPEICLIIDDRPKSGLTKDDAMKKIKSENIPITKVIKLSKLKSDYKAFEA 140

Query: 130 KRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSSALLY 189
           KRKLCDSYDMFF D R+IP+LP ++GK F+  KKIPV L+L+H+NWK QIEK+C SA+ +
Sbjct: 141 KRKLCDSYDMFFTDRRIIPLLPRVIGKKFFTSKKIPVALDLKHRNWKHQIEKACGSAMFF 200

Query: 190 LRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIALPLYQ 249
           +R GTCSV+KV K SM++ EI  NV+A ++G+ E +P KW+ V+S HLK+ ES+ALP+YQ
Sbjct: 201 IRTGTCSVIKVGKLSMDICEITENVMATLNGLVEFLPNKWTYVRSLHLKLSESLALPIYQ 260

Query: 250 TVPELKMKIEAAVRGK---EEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRYM 309
           +VP+LK+KI+A   GK   +EE   EV +        K    K K   KKKGRIHEVRYM
Sbjct: 261 SVPDLKLKIDAFGSGKSVVQEEKEGEVEEVVAVDGGEKSVTGKGK---KKKGRIHEVRYM 320

Query: 310 DSNGLK-LSEEEDEQDSDVDEVSENIEKGKKRSRVKKAKEELQSELNVEKTSKKKKKKKK 366
           DSN  + L E+E   D D +E+ E+ EK     ++KK K+E+      EK  KK  K K 
Sbjct: 321 DSNVAEVLDEDEIGGDEDNNEIVESEEK-----KMKKRKKEVSEVAESEKPMKKAAKGKL 377

[Close]

BLAST of CmoCh02G014980 vs. TAIR 10
Match: AT2G42650.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 323.6 bits (828), Expect = 2.2e-88
Identity = 187/371 (50.40%), Postives = 261/371 (70.35%), Query Frame = 0


Query: 11  SRVRRETAEKAVESLLQW--RSSKREKPQLLDQEDFLYLVVTLKKIPPKGRTNPYKIPLP 70
           SRV  +T + AV++L++     S+ EKPQLL+++ F YLVV LKKIP +  TN Y+IPLP
Sbjct: 2   SRVSPKTVDDAVKALVKEGNEKSRTEKPQLLEEDGFFYLVVALKKIPQRNFTNAYRIPLP 61

Query: 71  HPL---RSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAK 130
           HPL     +S ELCLIIDDR +S LT++DA+K I+SENIPI+KV+KLSKLKSDY  FE+K
Sbjct: 62  HPLINTTEDSPELCLIIDDRPESGLTEEDAKKNIKSENIPITKVVKLSKLKSDYGSFESK 121

Query: 131 RKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSSALLYL 190
           RKLCDSYDMFF+D RVIPMLP L+GK F++ KK PV ++L+H NWKEQIEK+C +A+ ++
Sbjct: 122 RKLCDSYDMFFSDRRVIPMLPKLIGKKFFQSKKTPVAIDLKHMNWKEQIEKACGAAMFFM 181

Query: 191 RRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIALPLYQT 250
           R G+CS +KVAK SME ++IV NV A ++G+ +++P +W  ++S HLK+ ES++LPLYQT
Sbjct: 182 RTGSCSAIKVAKLSMESDDIVENVTATLNGVVDVLPSRWKYIRSLHLKLSESLSLPLYQT 241

Query: 251 VPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRYMDSN- 310
           VP L++KI+    G EE  N E    G + + V  S+ K  K  KK G+IHEVRYMDSN 
Sbjct: 242 VPYLQLKIDPL--GVEEVKNGE----GLAKSDVDDSSSKSVKTKKKNGKIHEVRYMDSNV 301

Query: 311 GLKLSEEEDEQDSDVDEVSENIEKG---KKRSRVKKAKEELQSELNV--EKTSKKKKKKK 370
              L ++E ++    DEV++++      KKR ++  +K  +  + ++   K  +K KK K
Sbjct: 302 SETLGDDEFDRSVGEDEVADDLNASGDKKKRKKMSSSKSAVSGKPDIVKSKNGQKSKKLK 361

[Close]

BLAST of CmoCh02G014980 vs. TAIR 10
Match: AT1G06380.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 252.3 bits (643), Expect = 6.3e-67
Identity = 131/242 (54.13%), Postives = 178/242 (73.55%), Query Frame = 0


Query: 11  SRVRRETAEKAVESLLQW--RSSKREKPQLLDQEDFLYLVVTLKKIPPKGRTNPYKIPLP 70
           S+V  +   +AV+SLL+W    SK E  + L+ + F+YL+VTLK+IP   RTNP  IPLP
Sbjct: 16  SKVDPQNVNRAVKSLLKWWDSKSKTENSESLENDGFVYLIVTLKRIPQLDRTNPLMIPLP 75

Query: 71  HPL----RSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEA 130
           HPL      +  ELCLIIDD+ K+ +TK+ A KKI++E IPI+ VIK+SKLKSD R  E 
Sbjct: 76  HPLIDLVAEDPPELCLIIDDKHKNKITKEAALKKIEAEKIPITTVIKVSKLKSDLRKLEE 135

Query: 131 KRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSSALLY 190
           +++    ++++FA+ R++PMLP LLGK F KK K P+ +NLRH +WKEQIEK+C SAL +
Sbjct: 136 EKR----FELYFAERRLMPMLPKLLGKEFVKKNKTPIAINLRHGSWKEQIEKACESALFF 195

Query: 191 LRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIALPLYQ 247
           +  GTCSVVKVAK SM   EI  NV+AA++GI ++VP +W NV+ FHLK+LES+ALP+YQ
Sbjct: 196 VGTGTCSVVKVAKLSMGRNEIAENVVAAMNGIGDLVPGRWKNVKLFHLKLLESLALPVYQ 253

The following BLAST results are available for this feature:

BLAST of CmoCh02G014980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8BVY0	4.7e-35	34.17	Ribosomal L1 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rsl1d1 PE=1...	[more]
O76021	1.7e-32	29.11	Ribosomal L1 domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RSL1D1 PE=1 ...	[more]
Q5RCE6	1.7e-32	29.11	Ribosomal L1 domain-containing protein 1 OS=Pongo abelii OX=9601 GN=RSL1D1 PE=2 ...	[more]
A4FV97	1.6e-30	30.79	Ribosomal L1 domain-containing protein 1 OS=Bos taurus OX=9913 GN=RSL1D1 PE=2 SV...	[more]
Q9UT32	4.9e-24	32.35	Putative ribosome biogenesis protein C8F11.04 OS=Schizosaccharomyces pombe (stra...	[more]

BLAST of CmoCh02G014980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2T1	2.5e-204	100.00	ribosomal L1 domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1K7W6	2.3e-186	94.13	ribosomal L1 domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1ESQ8	8.1e-155	82.26	ribosomal L1 domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1HY99	6.8e-154	82.26	ribosomal L1 domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1E0M1	4.6e-150	80.69	ribosomal L1 domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=...	[more]

BLAST of CmoCh02G014980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958691.1	5.1e-204	100.00	ribosomal L1 domain-containing protein 1-like [Cucurbita moschata]	[more]
XP_023521630.1	1.2e-189	96.30	ribosomal L1 domain-containing protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023532538.1	2.7e-189	96.00	ribosomal L1 domain-containing protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022996144.1	4.8e-186	94.13	ribosomal L1 domain-containing protein 1-like [Cucurbita maxima]	[more]
KAG7036050.1	3.1e-185	93.92	Ribosomal L1 domain-containing protein 1, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of CmoCh02G014980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58660.1	1.9e-95	55.89	Ribosomal protein L1p/L10e family	[more]
AT2G42650.1	2.2e-88	50.40	Ribosomal protein L1p/L10e family	[more]
AT1G06380.1	6.3e-67	54.13	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 339..359
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 322..351
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..310
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..384
None	No IPR available	PANTHER	PTHR23105:SF31	RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1	coord: 10..303
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 10..303
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 37..237 e-value: 1.2E-60 score: 204.7
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 18..242 e-value: 5.55021E-47 score: 157.346
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	3.40.50.790		coord: 88..180 e-value: 1.2E-15 score: 59.3
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 14..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G014980.1	CmoCh02G014980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
cellular_component	GO:0030686	90S preribosome
molecular_function	GO:0003723	RNA binding