CmoCh02G014920 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh02G014920
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr02: 8738695 .. 8739482 (-)
RNA-Seq ExpressionCmoCh02G014920
SyntenyCmoCh02G014920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTCTCTGAAAATGAATTCCAGAACAGCGATAACTCTGTTTTGAGACCGATTCTTCTGTACTCTTCAATTTTCCTTCTGGGTTTCTTTGCTTCTGAATCCACAAGTAATTAAGAACCGCTTAGTTTGCTGATTCAGGTTCTCCAACCTCATACTCCCTTTTTAATTTCGCCTCGTTTTCCTAAACAAACACTTTTGGTCTTGCTTTTTGTGACCTTTGCCATGATTATAAAGGGATTTTGTTGATTGGCTCTAGGACGCACGCACGCGTCTGTTTCTGCTCTGTAATTTAAGTGGGTGTGCCTTGTTCTTTGTTCATTGTTTTTCTTTTATGAGAATCCAGGGAGTTCTCAGAATTTTTGCGAGCGGTGGCTCAATTTAGATCCTATTGAGTTGACCCAGATAGGAATTTACAAGAAACAGGTTTCTTCGAGTAATTTTCGCCTCAATTGACTTGGATTTGACTTGTTTTTTGTGATTATTTTTGCATTTGTTTCTGTTCTTAAAGCGTTGCTATCGGATTTTCCTTAGCTCAAGTGAACTCTGAATCGGATTTTTGCGTTCTTGTTTAGCACACACATTCTTTTCTGCGATTAGATACGATTTGGGTTTCTTCGCATCCATCTGCTTAGCTTTTGTGGGGTTATATGTGAAATGAGTTGATGAATTTGACTTGGGTATGTCTAATTTGGCTTCCTCAGGATTCTATTGGATTGGCTCATTGGCATGTGGCGTTGGATGGACTAGAGGAGCTTTACAAGCACTTTTATAATCCAAAGCTCTGA

mRNA sequence

ATGAAGTTCTCTGAAAATGAATTCCAGAACAGCGATAACTCTGTTTTGAGACCGATTCTTCTGTACTCTTCAATTTTCCTTCTGGGTTTCTTTGCTTCTGAATCCACAAGGAGTTCTCAGAATTTTTGCGAGCGGTGGCTCAATTTAGATCCTATTGAGTTGACCCAGATAGGAATTTACAAGAAACAGGATTCTATTGGATTGGCTCATTGGCATGTGGCGTTGGATGGACTAGAGGAGCTTTACAAGCACTTTTATAATCCAAAGCTCTGA

Coding sequence (CDS)

ATGAAGTTCTCTGAAAATGAATTCCAGAACAGCGATAACTCTGTTTTGAGACCGATTCTTCTGTACTCTTCAATTTTCCTTCTGGGTTTCTTTGCTTCTGAATCCACAAGGAGTTCTCAGAATTTTTGCGAGCGGTGGCTCAATTTAGATCCTATTGAGTTGACCCAGATAGGAATTTACAAGAAACAGGATTCTATTGGATTGGCTCATTGGCATGTGGCGTTGGATGGACTAGAGGAGCTTTACAAGCACTTTTATAATCCAAAGCTCTGA

Protein sequence

MKFSENEFQNSDNSVLRPILLYSSIFLLGFFASESTRSSQNFCERWLNLDPIELTQIGIYKKQDSIGLAHWHVALDGLEELYKHFYNPKL
Homology
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BLAST of CmoCh02G014920 vs. NCBI nr
Match: KAG7036045.1 (hypothetical protein SDJN02_02845, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-09
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 1  MKFSENEFQNSDNSVLRPILLYSSIFLLGFFASESTR 38
          MKFSENEFQNSDN VLRPILLYSSIFLLGFFASESTR
Sbjct: 23 MKFSENEFQNSDNPVLRPILLYSSIFLLGFFASESTR 59

The following BLAST results are available for this feature:
BLAST of CmoCh02G014920 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh02G014920 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh02G014920 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7036045.11.3e-0997.30hypothetical protein SDJN02_02845, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CmoCh02G014920 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G014920.1CmoCh02G014920.1mRNA