CmoCh02G013020 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTGAGCCATTTTCATGTGATATAAACCCTTTTCTTCTCACCCATATTCACACTCAACAACGCATAAGAGAAAGAAGAAAAACCCTATTTGCTGCTTGGGAGAGGGAAGGTGAAAGAAAGGTGAGTTTGAATTATAAGCTCAATTTTAATTTATTTTCTTAATTTTACTCGATCCCGATTCGAGTTAACTGGACTCGAACATTTGGTCTCTTGATTAAGAATATATGTCTTAACTAGTCGAAGGGAAACGGGACATGAGTTATGAATTTTACTTGAATTAAGCTTATATTTTGTGTTTATATGATATTTTTTTAGTTTATTTAATATTTTATTAGTGATGTTTTTACATAAATATGGTGTAATTAATTAAATAAAATAAAATAATTAATTAAAACACGGTTTTAAGTTTATGAATTTAATTTTATTTGTTAATGTAGTCTGAAACATGACACGTGCGAGGCATGCCTCGTGTTCCGTCTTTTTTCAGTCCATTTCAGAATCGTGTTGGGCTGTTTCTGTTTAATATCATCGAAAACGTTAATGGGCCGAGCCCAAATAAACTGCAATTTTTTTATATTTTTATTTTTATATAATTCCACTAATTTTAATATACAATTTTTAAAACTTTGTTTGAGCAATAATTGTTAGCGCATGTTAGCGCATTTTGGCGCATTTTAGAATGGTAATTTTGGGTGATTGAAGGATGGAGGTTATTTTTCTGTTGAGCTTGCATGAATGTTTAGATGATGTAATGATTGTGATACTCGAGCTATAGATTTTTCCCTAAACCAATGTTTTTCTTTTTTTCCTCAACTCCACTCGAAGCAAATTACTTTAGCGAATAAATGGATCCAAGCAGCTCGAAAATTGACCCATCAGGTGTGTCTTATTTATTAATTTTGACCTCTAAAAATATTACCTTTTCGAGTTCTTACATTTTTTTGTTTAATACAATATTAGAGTATACGATGTTTATTTGTGCATGTAGAATTCAAGCCTGCAGGTTCAGAACTCGAGGTCTTGCAGAAAGAGGTTGAGGCAAAAACGAAGAAAATTAAAGAGATGAAGAAGGAGATTGAAGGAATAAAAATGTGGTTGGAGGAGAAGAAAGCTTCTAGGGAAGAGATGGAAAGTTTAAAGAGATTATGTGAAGAATACAACAGCTTGAGAAAGGAATACTATGAAACATTGGGCAAACAGACAAGGGAATCCTAGGAAATGTGTAATTAATGACCATATACTATAATTATTAATGTCTATTTGCATGCTGTTTAATTATTATTAAAATCCAATTATTTATTTATTTATTTATTATTTAAAATTTGACCAACC CTCTGAGCCATTTTCATGTGATATAAACCCTTTTCTTCTCACCCATATTCACACTCAACAACGCATAAGAGAAAGAAGAAAAACCCTATTTGCTGCTTGGGAGAGGGAAGGTGAAAGAAAGCAAATTACTTTAGCGAATAAATGGATCCAAGCAGCTCGAAAATTGACCCATCAGAATTCAAGCCTGCAGGTTCAGAACTCGAGGTCTTGCAGAAAGAGGTTGAGGCAAAAACGAAGAAAATTAAAGAGATGAAGAAGGAGATTGAAGGAATAAAAATGTGGTTGGAGGAGAAGAAAGCTTCTAGGGAAGAGATGGAAAGTTTAAAGAGATTATGTGAAGAATACAACAGCTTGAGAAAGGAATACTATGAAACATTGGGCAAACAGACAAGGGAATCCTAGGAAATGTGTAATTAATGACCATATACTATAATTATTAATGTCTATTTGCATGCTGTTTAATTATTATTAAAATCCAATTATTTATTTATTTATTTATTATTTAAAATTTGACCAACC ATGGATCCAAGCAGCTCGAAAATTGACCCATCAGAATTCAAGCCTGCAGGTTCAGAACTCGAGGTCTTGCAGAAAGAGGTTGAGGCAAAAACGAAGAAAATTAAAGAGATGAAGAAGGAGATTGAAGGAATAAAAATGTGGTTGGAGGAGAAGAAAGCTTCTAGGGAAGAGATGGAAAGTTTAAAGAGATTATGTGAAGAATACAACAGCTTGAGAAAGGAATACTATGAAACATTGGGCAAACAGACAAGGGAATCCTAG MDPSSSKIDPSEFKPAGSELEVLQKEVEAKTKKIKEMKKEIEGIKMWLEEKKASREEMESLKRLCEEYNSLRKEYYETLGKQTRES Homology
BLAST of CmoCh02G013020 vs. ExPASy TrEMBL
Match: A0A6J1H234 (uncharacterized protein LOC111459736 OS=Cucurbita moschata OX=3662 GN=LOC111459736 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.2e-29 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
BLAST of CmoCh02G013020 vs. ExPASy TrEMBL
Match: A0A0A0KIA6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434370 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 9.1e-14 Identity = 53/90 (58.89%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of CmoCh02G013020 vs. ExPASy TrEMBL
Match: A0A2C9VRE5 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G161800 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 5.9e-05 Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 0
BLAST of CmoCh02G013020 vs. ExPASy TrEMBL
Match: D7SNF6 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00140 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.3e-04 Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 0
BLAST of CmoCh02G013020 vs. ExPASy TrEMBL
Match: A0A438KG72 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_004605 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.7e-04 Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = 0
BLAST of CmoCh02G013020 vs. NCBI nr
Match: KAG7035874.1 (hypothetical protein SDJN02_02673, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 151.4 bits (381), Expect = 3.6e-33 Identity = 82/86 (95.35%), Postives = 83/86 (96.51%), Query Frame = 0
BLAST of CmoCh02G013020 vs. NCBI nr
Match: XP_022958532.1 (uncharacterized protein LOC111459736 [Cucurbita moschata]) HSP 1 Score: 138.7 bits (348), Expect = 2.4e-29 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
BLAST of CmoCh02G013020 vs. NCBI nr
Match: KGN48117.1 (hypothetical protein Csa_003321 [Cucumis sativus]) HSP 1 Score: 85.9 bits (211), Expect = 1.9e-13 Identity = 53/90 (58.89%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of CmoCh02G013020 vs. NCBI nr
Match: KAG8653043.1 (hypothetical protein MANES_06G161800v8 [Manihot esculenta] >KAG8653045.1 hypothetical protein MANES_06G161800v8 [Manihot esculenta]) HSP 1 Score: 57.0 bits (136), Expect = 9.3e-05 Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = 0
BLAST of CmoCh02G013020 vs. NCBI nr
Match: KAG8653044.1 (hypothetical protein MANES_06G161800v8 [Manihot esculenta]) HSP 1 Score: 57.0 bits (136), Expect = 9.3e-05 Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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