CmoCh02G012950 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh02G012950
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr02: 7701507 .. 7702368 (+)
RNA-Seq ExpressionCmoCh02G012950
SyntenyCmoCh02G012950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAATTCTGTACGTTTTTGTTATAGAAATTAAGTGGTTGTAATTAAATTTTTGTAATTTTATTACTGGCCACATAAAAAAAACGTAAAGAAAAAACTAATCTTAAATTACAAGAACAGTCATGATTCAATTCTCAAATTGTTTGGTTAAAATTAGACCGTGAATTACTCGAAAATAACATTTAGTTGACTTGTATATTCGATAAATTTATTTTTTGAAATGTAATGATTATAGTTATAATTTCTTACAAATTAAATTAGAAAAAAAAGGGAGTTTGTGGATTGAAAAGGAGGAGGGAAGGAGGTGGGGGAGAAGAGCCTCGTTTTGTCTTCCGTCTTGGTTGAATCCAGGAAGGGAGGAGAGAAATTTTGGAGGAGAAAGGGAATTCTGAAACTCAAGCAATCAATCAACGCCTCATTCACGTTCTTGAGATTCATCTTTCTCCTTCAAATTTCAGATTCAAACGACTTCAATTTCTCCTCCCGGCTAACTTCTCCGGTTATTCCTCCCGACGTTGTCGCGATTCCTGAATTTCAACGAAAATTTCCAGGTCGGTTTTCTGATTTCTTGGCGATTTTTAGGTTTCGATGCGAATAAATTTTCTAGGCCTTTGTGATTGTTATGATCATGAATGGATATCTCTGTGTTAATTTCTCTTTTTTCTTTTTGTTTTTGATTCCTTGGAGTAAGTGCCTGCTTGATTCCGATTATGACATCTTGTGCGATTTTGGATTTGTGTTTAGATGAAATCATCGTATTGATTATCCATCTCAGATTCTCAGCTTGGTTCGTATTGTTTCTGAGAAAAGCTTTGGATCTTAACTTAATATATTTGTTTGATAGGGTTTGAAATCCATTAA

mRNA sequence

ATGAGAATTCTGAAGGGAGGAGAGAAATTTTGGAGGAGAAAGGGAATTCTGAAACTCAAGCAATCAATCAACGCCTCATTCACGTTCTTGAGATTCATCTTTCTCCTTCAAATTTCAGATTCAAACGACTTCAATTTCTCCTCCCGGCTAACTTCTCCGGTTATTCCTCCCGACGTTGTCGCGATTCCTGAATTTCAACGAAAATTTCCAGGGTTTGAAATCCATTAA

Coding sequence (CDS)

ATGAGAATTCTGAAGGGAGGAGAGAAATTTTGGAGGAGAAAGGGAATTCTGAAACTCAAGCAATCAATCAACGCCTCATTCACGTTCTTGAGATTCATCTTTCTCCTTCAAATTTCAGATTCAAACGACTTCAATTTCTCCTCCCGGCTAACTTCTCCGGTTATTCCTCCCGACGTTGTCGCGATTCCTGAATTTCAACGAAAATTTCCAGGGTTTGAAATCCATTAA

Protein sequence

MRILKGGEKFWRRKGILKLKQSINASFTFLRFIFLLQISDSNDFNFSSRLTSPVIPPDVVAIPEFQRKFPGFEIH
Homology
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BLAST of CmoCh02G012950 vs. NCBI nr
Match: KAG6605919.1 (hypothetical protein SDJN03_03236, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 147.5 bits (371), Expect = 4.6e-32
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 4   LKGGEKFWRRKGILKLKQSINASFTFLRFIFLLQISDSNDFNFSSRLTSPVIPPDVVAIP 63
           LKGGEKFWRRKGILKLKQSINASFTFLRFIFLLQISDSNDFNFSSRLTSPVIPPDVVAIP
Sbjct: 174 LKGGEKFWRRKGILKLKQSINASFTFLRFIFLLQISDSNDFNFSSRLTSPVIPPDVVAIP 233

Query: 64  EFQRKFPGFEIH 76
           EFQRKFPGFEIH
Sbjct: 234 EFQRKFPGFEIH 245

The following BLAST results are available for this feature:
BLAST of CmoCh02G012950 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh02G012950 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh02G012950 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6605919.14.6e-32100.00hypothetical protein SDJN03_03236, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CmoCh02G012950 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G012950.1CmoCh02G012950.1mRNA