CmoCh02G012210 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh02G012210
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionNon-structural maintenance of chromosomes element 1 homolog
LocationCmo_Chr02: 7347116 .. 7351760 (-)
RNA-Seq ExpressionCmoCh02G012210
SyntenyCmoCh02G012210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAAAAGCGGCTATCCAGCGCTAGACGACTTCACTTCCTGGAGGTCTTTCAAAATTTTCCCGCACAAATTCTTCTCTTCTATGAGTTTGGCTGAAACTCCCTTACAGAATCAACCTTGTCTGAATCTTTGAGGTATTAGCTGACCTTGAATTAGGGTTCAGAATGCGGGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCCCACTCAGAGAGGATCACTTCCATTTGCTGTTTACGCGGATCACTGAAAAGAGTCCAGGTTTTAATTTCTTTCTCCTTCCCCAGTTTGGTATTCAAGTTGGGAAGTAATGATTTAACGGTATGGAGTCCTGCTCGATTTTTTTCTAACAAATGATGGAGGATGTCTTTCTTAGATCATCTGTAAAAGATGCGTTTGAGTTCTTATAAATTCATGTTCAAAGATTACCGAATATTTGCAATAGAATGGTTTCTGAGTATAATATGGAACCACATATTGGAAGAAATTGCATCTGGGGTTCATATCCGTATACGTTTTGGAAATGTGTATTCTTATATCTTTCCTTAATCATTAGCATAAACGATTGAAAAAGAAGAGTGTTTTTAATTGAATTCGGCCGACGGTTGAAAACTAAGATCTGATCGATGTTTATTTTGGTGCAGAGAATGACCGGCAGCTTTTTAATAATTACCTCCTGACGATGAACAAAGCACTTTCTTTTGCTCAATTTGAGTTGCGAGGCTGCAGAAACCAATATGATGGTCGTGTTTACTATGGCTTGGTCAATAATGTATCCGATGAACAATCCAAACTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTGAGTTATCAACTATGGGAAGTATTGGCGTTCTTCAATAAACTGACCATTCTGCCAATTTGCTTAGCAATCAACTATGGGAACTTAGTGCTTACAATATATGCATCTTTTGTTTTATTGTCGTAAATTGCTATGTCAGGTTGAAGCAATTGCACAAGATCCATCTGCTCGAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGGTTCCTCTTGTTTGTATATGACCAATACTACCGTTTTGAGTCTATTATTGTCAAAGTCAGCTGCATATTTAACTAAGGTTGGCATCTTTGGTCTTTTGCCTTGTAAATAAGACTAATTCCACGTATTGTGGACAAGAACTCTTTGGAATGAGTTTGTGAGATCCCACATCGTTTAGAGAGAGGAACGAGTGCCAGTGAGGACGTTGGGTCCCGAACGGGGTGGATTGTGAGATCCAATATCGGTTGGAGAGGGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAGAGAAAGCCCAAAAAGGAAAAGCCAAAGAAGACAATATCTGCTAGAGGTGGGCTCGGGCTATTACAGAGTTGAACAAGAGTATCATTTGATCTTTAGCTTATATCATTCATAGAAAGGTACACTAGTTCTTAAATTATGATTTGATACGAGTCACATTCTTCTTGAATTTAAATATTGCCAATGGAGTGCCAAGAGTTTTCTACGTGGTTAAGGCTCGTATCGTAACTTATCGATCAAAATTGGATAATGGGACTGTTAGTCCGACAGTGGCATGAATGCCTTTAGAATATATTGATACATTCACTTCTTTGTGGCCACTTCAATTAAATTCGCCTAGGAGTCACTCTCAAGTTTGTTATTTTCACTTCTTTCTTTTCCAATACCTGAATTTTTATAATTGTTAAATTTGAGACTAAGAATTTAAGGCCACACTTAAACTCTACACAATTTTGTTGCAATGCTTCTGATTTGCCCCCATTGTTGGTATAATTGAGAACTGACAAAAGCTTCCAGCTCCTTGTATTACTCTCTTTGTAGGCCTTTTCTGCTTTTTCCCATATCTAAGAATCCTATTGTATAATATTCGTATCATTGTTTAACTGTTACTGTTTTATCACTACCAGCTGGGGGATGCAGGGTCCCAGTCCCATGTCATACCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATCGCCGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTTTGTAAATTTGGGTGTCAGATCATTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGACATACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGTTCTCTTCTTTTATGCCATTTTTGTGATTTACTAAGTCAATTATCATTTTATCTCAATTTTGTGCATTGCATTATTTTCCCCTAATGCCCACACTGATAGGAGAAGCTGAACATTTGATGAAAAGGATTTTATGTTGACAGTGCAATTGGTCTGGATTTCAACATGATCCAAATTCCGTATAGTTTTTACTCTAAAGAACCTTAACCAACCTTATTTCCTTGATGATTTATATGTTTGCTGGACTTGTTATTCACAGGCAGAGTTGTGTAGTAATGAAGGCTGCACTGTTCGTGTACATCGGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGGTTATATGATGTGGTACCTTCCTAATTTAATCTTTTGATCTGCAAGATCTCTTGTTCCTAACAGTTCTTTAAATGGACTATTATTTAGAGTAAAAGGGCTTGCCCAAGTTGTGGCACTCAATGGCGATCTACAGCACCCAATGTGGAGTTCAAGGAGGAAGAGGATGAGCCAGATGCGCGCATTCAAGGCCAGTCATCATCACATAAGAGGAAGAAAACCAGATTGAACAGAGATATTGATTCAGGACCAAATGGAGACAGTATGGCTGCGGCACAAGCTTCCCAACCTCCTCCAGATACAAGGAGAATAACACGAAGTTCTGCACACCCGCGGTAGGCGCTTGAAATGAGGTACGGTTATTTTGATATAGTTTCATGGATCCTAGTCTAGGAGTTGTGAAGTGTGCAGCAACTGCACCTTTTGATGTATTGTGTCAAAATTATCATCATATTCATATTTAATTGAATTTGCTGTTTTCTCGTACACAGAATTGGAATGTAAAGTGCATTACACAGCGTAAGCCAAAGGTAAGTTTTTTTTTTTTTTCTTTTCTTTTCTTTCTTTTAATCTCTTGTAAACTATAGCAGTGTTCTCCATTCTTGTCGTCCACATATGCAAGGAACGAGCTGTTCCATTGTAATGATTTTTTTTCTTTTTGTACCTAGGATATTTTGATTGTATTGAGAGTATAAATAGGTTCAATATCCTTTAAATATCCCAAATTGCAGGAACAGCCCAAGTCTGCTACCAAACCTACCGCTAACAGATATTGTCATCTTTGGGTTTTCCCATTTAAGGTTCCGCTCAAGGTTTTTAAAACGCGTCTGCTAGGGAGAGTTTTTCACACCCTTATAAAGAATGTTTCGTTTTCCTCTCCAACCGATGAGGGATCTAACACCTTATTTATTTATTTTATTGTGAACGAGTGTCCGAGCCAACTTGTGTCACTGTAGAATCACAAAAAACTGTTTGACTTTACTCCATTTGGTTATTATAGAAACACTTTAGATCTCAATTTTAAGTATGTGAGTACCATAGATTGAACTTGTTAACTCAGAAATGGTTAACTGTAGCCTCTTTATTTAACAGGTATTATGCTTTTCGGTGGTGTTATGATGAACAGTTAAACATGTATGATGGGTCTGGATTGTGTAAAAAGGTATGCAGCTCAATGCTGAAAATTTGACCGTTCATCATATTTACTATGTTTAGATTTAAGGATAAATATATCCACTCTAGAGGAGTCATAATTAAGCTGTTTAAATAGTGAGAACAAATTAGAGCACTCTGGAGAAGTCATAATAGCAGTGACATGAGATTAAAGTGGTGTCTTTGAACTGTTGAGAATAGAATCGATTATGAAACTTTAGATGGTGGGAAAGTGAAGCAATGAAAAGAATATGGCTACATGTTTGTCTTTATATAATTAGATTATCTGAATTCATTACAAAAATGTCCCTTTATGAAGCTGACTTGGCTGTGAAAAGAGAGTTTGATCTAATTAGCATCTTGTGAATGACGTTCAATCATTCCAACTAAGCTGCAGTAGGTGTGTCTAAGTCCACTACTAGTCGATATTGTCTCTTTTGGACTTTTTCTTTTAAGCTTCTTCTCAAAATTTTTAAAACGCGTCTGCTAGGGAGAGGTTTTCACACTCTTATAAAAAATATTTCTTTGTCCTCTCAACCGAGGCGGGATCTCACAATCCATTGAGATATGCTAACTTTTATTCTTTTTAATTCAACGACACATTAAATGAATTATTTAAACCTTTATTTGGTTGATGATGCATGTTTTATATCAGTTGAATTTTGTTCTTATTAGTGGGCTATGCTCACTAGAGAACGACGAAACATCTGATGGGACGTGAGTGGATGCTTTGATGTCCTAAGGGCACACATGGCCTAAGCTTCTCAGCATTGTGGTTTGTGTCATTTGTACGACCTCTGTTTTTAAGCCTTTGCCTTGTTTAAACAAGAACAGAATCCAAAGTAATGTCTCAATTCAAAAGGTATAACCATTTTGCCATTTATTATCTGTTCTATTATTATAAAGTATGAGTAA

mRNA sequence

GTAAAAGCGGCTATCCAGCGCTAGACGACTTCACTTCCTGGAGGTCTTTCAAAATTTTCCCGCACAAATTCTTCTCTTCTATGAGTTTGGCTGAAACTCCCTTACAGAATCAACCTTGTCTGAATCTTTGAGGTATTAGCTGACCTTGAATTAGGGTTCAGAATGCGGGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCCCACTCAGAGAGGATCACTTCCATTTGCTGTTTACGCGGATCACTGAAAAGAGTCCAGAGAATGACCGGCAGCTTTTTAATAATTACCTCCTGACGATGAACAAAGCACTTTCTTTTGCTCAATTTGAGTTGCGAGGCTGCAGAAACCAATATGATGGTCGTGTTTACTATGGCTTGGTCAATAATGTATCCGATGAACAATCCAAACTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTTGAAGCAATTGCACAAGATCCATCTGCTCGAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATGCAGGGTCCCAGTCCCATGTCATACCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATCGCCGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTTTGTAAATTTGGGTGTCAGATCATTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGACATACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTAATGAAGGCTGCACTGTTCGTGTACATCGGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGCCCAAGTTGTGGCACTCAATGGCGATCTACAGCACCCAATGTGGAGTTCAAGGAGGAAGAGGATGAGCCAGATGCGCGCATTCAAGGCCAGTCATCATCACATAAGAGGAAGAAAACCAGATTGAACAGAGATATTGATTCAGGACCAAATGGAGACAGTATGGCTGCGGCACAAGCTTCCCAACCTCCTCCAGATACAAGGAGAATAACACGAAGTTCTGCACACCCGCGTTTCATGGATCCTAGTCTAGGAGTTGTGAAGTGTGCAGCAACTGCACCTTTTGATAATTGGAATGTAAAGTGCATTACACAGCGTAAGCCAAAGTATGAGTAA

Coding sequence (CDS)

ATGCGGGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCCCACTCAGAGAGGATCACTTCCATTTGCTGTTTACGCGGATCACTGAAAAGAGTCCAGAGAATGACCGGCAGCTTTTTAATAATTACCTCCTGACGATGAACAAAGCACTTTCTTTTGCTCAATTTGAGTTGCGAGGCTGCAGAAACCAATATGATGGTCGTGTTTACTATGGCTTGGTCAATAATGTATCCGATGAACAATCCAAACTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTTGAAGCAATTGCACAAGATCCATCTGCTCGAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATGCAGGGTCCCAGTCCCATGTCATACCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATCGCCGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTTTGTAAATTTGGGTGTCAGATCATTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGACATACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTAATGAAGGCTGCACTGTTCGTGTACATCGGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGCCCAAGTTGTGGCACTCAATGGCGATCTACAGCACCCAATGTGGAGTTCAAGGAGGAAGAGGATGAGCCAGATGCGCGCATTCAAGGCCAGTCATCATCACATAAGAGGAAGAAAACCAGATTGAACAGAGATATTGATTCAGGACCAAATGGAGACAGTATGGCTGCGGCACAAGCTTCCCAACCTCCTCCAGATACAAGGAGAATAACACGAAGTTCTGCACACCCGCGTTTCATGGATCCTAGTCTAGGAGTTGTGAAGTGTGCAGCAACTGCACCTTTTGATAATTGGAATGTAAAGTGCATTACACAGCGTAAGCCAAAGTATGAGTAA

Protein sequence

MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPPPDTRRITRSSAHPRFMDPSLGVVKCAATAPFDNWNVKCITQRKPKYE
Homology
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BLAST of CmoCh02G012210 vs. ExPASy Swiss-Prot
Match: Q6PAF4 (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis OX=8355 GN=nsmce1 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.6e-10
Identity = 62/282 (21.99%), Postives = 117/282 (41.49%), Query Frame = 0 

Query: 8   HHTLIQALLARGPLREDHFHLLFTRITE-KSPENDRQLFNNYLLTMNKALSFAQFELRGC 67
           H   +QAL++ G +       L     E           ++++  +N+ L      +   
Sbjct: 9   HQRFLQALMSHGIMEGSAVRALHRHCCELHKVHYMHDKLDDFVGVLNRHLQPLFMTIEKG 68

Query: 68  RNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISNIAALHL 127
             + DG  YY LVN V ++ +K+ + Y+  ++  ++  +E I    S  G  ++I+ L+L
Sbjct: 69  VGEEDGLTYYALVNRVENDITKMASDYAENELELFRKTMELIIL--SDNGFATSISILNL 128

Query: 128 QLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNLGVRSF 187
             E Q                  S  +K+K + +L     Q++WL    +G   L  R  
Sbjct: 129 ADELQ------------------SKKMKKKEVEQLLQSFVQEKWL-IGRNGEYTLHTRCI 188

Query: 188 LDLRSWFRT--NDIPS-CEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPS 247
           ++L  + R    D+   C VC +  ++++LC N  C + +H  C  K   + K+   CP+
Sbjct: 189 MELEHYIRNTYQDVAKICNVCRKVAIQSQLCEN--CGIPLHLQCAGKYF-HGKANPTCPN 248

Query: 248 CGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRD 282
           C   W    P++           ++  Q  SH + +T   R+
Sbjct: 249 CNESWPHEIPDLN----------QVSSQGPSHSQTETVRGRN 256

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BLAST of CmoCh02G012210 vs. ExPASy Swiss-Prot
Match: Q6P881 (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus tropicalis OX=8364 GN=nsmce1 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.5e-08
Identity = 59/279 (21.15%), Postives = 113/279 (40.50%), Query Frame = 0 

Query: 3   ELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPEN-DRQLFNNYLLTMNKALSFAQF 62
           +++  H   +Q L++ G +       L     E    N      ++++  +NK L     
Sbjct: 4   QINESHQRFLQVLMSHGIMESSLVRALHRHCCEVHKVNYMHDNLDDFVGVLNKHLQPLFM 63

Query: 63  ELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISNI 122
           ++     + DG  YY LVN V ++ +K+ + Y+  ++  ++  +E I    S  G    I
Sbjct: 64  KIEKGVGEEDGLTYYALVNRVENDITKMASDYAENELELFRKTMELII--ISENGFAPPI 123

Query: 123 AALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNL 182
           + L+L  E Q                  S  +K+K + +L     QD+WL    +G   L
Sbjct: 124 SILNLADELQ------------------SKKMKKKEVEQLLQSFVQDKWL-IGRNGEYTL 183

Query: 183 GVRSFLDLRSWFRT--NDIPS-CEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSK 242
             R  ++L  +      D+   C VC++  ++ +LC N  C + +H  C   +     + 
Sbjct: 184 HTRCIMELEHYILNTYQDVAKICNVCHKIAIQCQLCEN--CGIPLHLQC-AGIYFRGIAN 243

Query: 243 RACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKR 274
             CP+C   W    P++          +++  Q  SH +
Sbjct: 244 PLCPNCKESWPHEIPDL----------SQVSSQGPSHSQ 248

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BLAST of CmoCh02G012210 vs. ExPASy TrEMBL
Match: A0A6J1GZN9 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111459112 PE=3 SV=1)

HSP 1 Score: 640.2 bits (1650), Expect = 5.0e-180
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRRITRSSAHPR
Sbjct: 301 PDTRRITRSSAHPR 314

[Close]
BLAST of CmoCh02G012210 vs. ExPASy TrEMBL
Match: A0A6J1JYV1 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490968 PE=3 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 8.0e-178
Identity = 310/314 (98.73%), Postives = 313/314 (99.68%), Query Frame = 0 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSP+NDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSA+GGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRRITRSSAH R
Sbjct: 301 PDTRRITRSSAHQR 314

[Close]
BLAST of CmoCh02G012210 vs. ExPASy TrEMBL
Match: A0A6J1K5P2 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490968 PE=3 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 8.0e-178
Identity = 310/314 (98.73%), Postives = 313/314 (99.68%), Query Frame = 0 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSP+NDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSA+GGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRRITRSSAH R
Sbjct: 301 PDTRRITRSSAHQR 314

[Close]
BLAST of CmoCh02G012210 vs. ExPASy TrEMBL
Match: A0A6J1DI86 (Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charantia OX=3673 GN=LOC111021178 PE=3 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 5.6e-155
Identity = 277/315 (87.94%), Postives = 290/315 (92.06%), Query Frame = 0 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSP+ND+QLFNNYLL +NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSA+GGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180
           IAALHLQLENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV
Sbjct: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180

Query: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPS 240
           RSFLDLRSWFRTNDIPSCEVCNEAGVKAELC NEGCTVRVH+YCLKKMLSNKKSKRACP 
Sbjct: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPG 240

Query: 241 CGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQP 300
           CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Sbjct: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP 300

Query: 301 PPDTRRITRSSAHPR 315
           PP+TRR+TRSSA  R
Sbjct: 301 PPETRRVTRSSARQR 310

[Close]
BLAST of CmoCh02G012210 vs. ExPASy TrEMBL
Match: A0A6J1DJY3 (Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charantia OX=3673 GN=LOC111021178 PE=3 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 5.6e-155
Identity = 277/315 (87.94%), Postives = 290/315 (92.06%), Query Frame = 0 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSP+ND+QLFNNYLL +NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSA+GGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180
           IAALHLQLENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV
Sbjct: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180

Query: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPS 240
           RSFLDLRSWFRTNDIPSCEVCNEAGVKAELC NEGCTVRVH+YCLKKMLSNKKSKRACP 
Sbjct: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPG 240

Query: 241 CGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQP 300
           CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Sbjct: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP 300

Query: 301 PPDTRRITRSSAHPR 315
           PP+TRR+TRSSA  R
Sbjct: 301 PPETRRVTRSSARQR 310

[Close]
BLAST of CmoCh02G012210 vs. NCBI nr
Match: XP_022957637.1 (non-structural maintenance of chromosomes element 1 homolog [Cucurbita moschata])

HSP 1 Score: 640.2 bits (1650), Expect = 1.0e-179
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRRITRSSAHPR
Sbjct: 301 PDTRRITRSSAHPR 314

[Close]
BLAST of CmoCh02G012210 vs. NCBI nr
Match: KAG7035803.1 (Non-structural maintenance of chromosomes element 1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 634.8 bits (1636), Expect = 4.4e-178
Identity = 311/314 (99.04%), Postives = 313/314 (99.68%), Query Frame = 0 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSP+NDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSA+GGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRRITRSSAHPR
Sbjct: 301 PDTRRITRSSAHPR 314

[Close]
BLAST of CmoCh02G012210 vs. NCBI nr
Match: XP_022995422.1 (non-structural maintenance of chromosomes element 1 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 632.9 bits (1631), Expect = 1.7e-177
Identity = 310/314 (98.73%), Postives = 313/314 (99.68%), Query Frame = 0 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSP+NDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSA+GGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRRITRSSAH R
Sbjct: 301 PDTRRITRSSAHQR 314

[Close]
BLAST of CmoCh02G012210 vs. NCBI nr
Match: XP_022995424.1 (non-structural maintenance of chromosomes element 1 homolog isoform X2 [Cucurbita maxima])

HSP 1 Score: 632.9 bits (1631), Expect = 1.7e-177
Identity = 310/314 (98.73%), Postives = 313/314 (99.68%), Query Frame = 0 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSP+NDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSA+GGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRRITRSSAH R
Sbjct: 301 PDTRRITRSSAHQR 314

[Close]
BLAST of CmoCh02G012210 vs. NCBI nr
Match: XP_023533198.1 (non-structural maintenance of chromosomes element 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 631.7 bits (1628), Expect = 3.7e-177
Identity = 309/314 (98.41%), Postives = 313/314 (99.68%), Query Frame = 0 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSP+NDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSA+GGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRRITRS+AH R
Sbjct: 301 PDTRRITRSTAHQR 314

[Close]
BLAST of CmoCh02G012210 vs. TAIR 10
Match: AT5G21140.1 (embryo defective 1379 )

HSP 1 Score: 342.8 bits (878), Expect = 3.2e-94
Identity = 174/316 (55.06%), Postives = 228/316 (72.15%), Query Frame = 0 

Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ 60
           M  LSW+HHTLIQAL++RGPL+E  FH +FT +T ++P   +++F+ YLL +NK LS+  
Sbjct: 1   MASLSWKHHTLIQALISRGPLKEKEFHSIFTAVTGRNPVTVKKIFDKYLLEINKELSYVH 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN 120
           FEL+ CR+QYDG+V YG+VNNV+D+QSKLGTKYSVPQIAF+K I+EAIAQD +A+G IS+
Sbjct: 61  FELKACRDQYDGQVCYGVVNNVADDQSKLGTKYSVPQIAFFKGIIEAIAQDEAAQGCISS 120

Query: 121 IAALHLQLENQL-GDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180
             AL+++LENQ+  +A S    +PPAFKNFS++ KEKT+ EL +D+WL  T +  + LG+
Sbjct: 121 FDALNIRLENQISSEASSSQQQVPPAFKNFSMTQKEKTLDELVRDKWLCRTRERNIGLGI 180

Query: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPS 240
           RS LDLRSWFR ND+PSCEVCNEAGVKA+LC  EGC VR+H+YCLKK+LS +  KR C  
Sbjct: 181 RSLLDLRSWFRNNDVPSCEVCNEAGVKADLCPTEGCPVRIHKYCLKKLLSQRDDKR-CSG 240

Query: 241 CGTQW-RSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQ 300
           CG  W  S     E  EE    +   + Q+++ K K+ R  R  DS  NG S A+  AS 
Sbjct: 241 CGKPWPLSKITKTEAAEEAMNDEEESETQATAPKAKRRRQQR--DSTENGSSQASL-AST 300

Query: 301 PPPDTRRITRSSAHPR 315
              +TRR+TRS  H R
Sbjct: 301 SGANTRRVTRSVGHSR 312

The following BLAST results are available for this feature:
BLAST of CmoCh02G012210 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6PAF41.6e-1021.99Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis OX... [more]
Q6P8814.5e-0821.15Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus tropicali... [more]
BLAST of CmoCh02G012210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GZN95.0e-180100.00Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita moschat... [more]
A0A6J1JYV18.0e-17898.73Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima ... [more]
A0A6J1K5P28.0e-17898.73Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima ... [more]
A0A6J1DI865.6e-15587.94Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charant... [more]
A0A6J1DJY35.6e-15587.94Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charant... [more]
BLAST of CmoCh02G012210 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022957637.11.0e-179100.00non-structural maintenance of chromosomes element 1 homolog [Cucurbita moschata][more]
KAG7035803.14.4e-17899.04Non-structural maintenance of chromosomes element 1-like protein [Cucurbita argy... [more]
XP_022995422.11.7e-17798.73non-structural maintenance of chromosomes element 1 homolog isoform X1 [Cucurbit... [more]
XP_022995424.11.7e-17798.73non-structural maintenance of chromosomes element 1 homolog isoform X2 [Cucurbit... [more]
XP_023533198.13.7e-17798.41non-structural maintenance of chromosomes element 1 homolog [Cucurbita pepo subs... [more]
BLAST of CmoCh02G012210 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G21140.13.2e-9455.06embryo defective 1379 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 196..254
e-value: 3.2E-11
score: 44.5
NoneNo IPR availableGENE3D3.90.1150.220coord: 5..81
e-value: 4.3E-13
score: 51.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 290..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..319
NoneNo IPR availablePANTHERPTHR20973:SF1BNAANNG27900D PROTEINcoord: 1..312
IPR011513Non-structural maintenance of chromosomes element 1PFAMPF07574SMC_Nse1coord: 8..185
e-value: 2.1E-41
score: 142.0
IPR011513Non-structural maintenance of chromosomes element 1PANTHERPTHR20973NON-SMC ELEMENT 1-RELATEDcoord: 1..312
IPR014857Zinc finger, RING-likePFAMPF08746zf-RING-likecoord: 197..240
e-value: 6.4E-9
score: 36.0
IPR014857Zinc finger, RING-likeCDDcd16493RING-CH-C4HC3_NSE1coord: 196..242
e-value: 9.67742E-14
score: 62.8325
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 84..193
e-value: 4.8E-17
score: 63.9

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G012210.1CmoCh02G012210.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006310 DNA recombination
biological_process GO:0006281 DNA repair
cellular_component GO:0005634 nucleus
cellular_component GO:0030915 Smc5-Smc6 complex
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016740 transferase activity