CmoCh02G011550 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCCATGCTAATGATGTTTCGACGAGCAAGATCATGACACGTGTAATAGTACACAATTGCGTGGTGGGGAGGGACTTCCGTTACTGCGTACACCGCCGCTTTCAATAGACCGTGTGTTTCATCTTTCGCGCTCTCTCTCTCGCGTCAGGTTTTACCTTTCTTCAATCTTTCATCTCCAAGGATTCCTCCTCATCTCTGCTCATCCAATTCCCTTTCAGATTCATTTACTACTTCTTGTTTCAATCGCCTCGCCATGGCGGAATGGCAGAGCTTCTCCAAACCGCCATGGCGGAGTTGTCAAGTTGATCTCTGTAGTTGTCTCTTTTAAAGAAGACAACCTCTCTACCTCTCGTACTACCGCTATTTCCATTCAGGAATCCGCCGGAGGAGCTTCCGGCATCAAGGTAATCGAAAGCGACCTGGCTGTTTTCGGGTCGGGTTCGGTAGATTTCGGATTGGCGCACGAACATGGTAGTGTGAGGAATGGCGGTATTGGTGGGAGGGATTCCGATGATGATGATTGGGAAGGGGTGGAGAGCACCGAATTCGATGAGCTCTACAGCGCCGCAACTGCATTTGTGGCTGCATCTGCTTTCTCCCAAGGTCTCCAATGA ATGTGCCATGCTAATGATGTTTCGACGAGCAAGATCATGACACGTATTCATTTACTACTTCTTGTTTCAATCGCCTCGCCATGGCGGAATGGCAGAGCTTCTCCAAACCGCCATGGCGGAGTTGTCAAGTTGATCTCTGTAGTTGTCTCTTTTAAAGAAGACAACCTCTCTACCTCTCGTACTACCGCTATTTCCATTCAGGAATCCGCCGGAGGAGCTTCCGGCATCAAGGTAATCGAAAGCGACCTGGCTGTTTTCGGGTCGGGTTCGGTAGATTTCGGATTGGCGCACGAACATGGTAGTGTGAGGAATGGCGGTATTGGTGGGAGGGATTCCGATGATGATGATTGGGAAGGGGTGGAGAGCACCGAATTCGATGAGCTCTACAGCGCCGCAACTGCATTTGTGGCTGCATCTGCTTTCTCCCAAGGTCTCCAATGA ATGTGCCATGCTAATGATGTTTCGACGAGCAAGATCATGACACGTATTCATTTACTACTTCTTGTTTCAATCGCCTCGCCATGGCGGAATGGCAGAGCTTCTCCAAACCGCCATGGCGGAGTTGTCAAGTTGATCTCTGTAGTTGTCTCTTTTAAAGAAGACAACCTCTCTACCTCTCGTACTACCGCTATTTCCATTCAGGAATCCGCCGGAGGAGCTTCCGGCATCAAGGTAATCGAAAGCGACCTGGCTGTTTTCGGGTCGGGTTCGGTAGATTTCGGATTGGCGCACGAACATGGTAGTGTGAGGAATGGCGGTATTGGTGGGAGGGATTCCGATGATGATGATTGGGAAGGGGTGGAGAGCACCGAATTCGATGAGCTCTACAGCGCCGCAACTGCATTTGTGGCTGCATCTGCTTTCTCCCAAGGTCTCCAATGA MCHANDVSTSKIMTRIHLLLLVSIASPWRNGRASPNRHGGVVKLISVVVSFKEDNLSTSRTTAISIQESAGGASGIKVIESDLAVFGSGSVDFGLAHEHGSVRNGGIGGRDSDDDDWEGVESTEFDELYSAATAFVAASAFSQGLQ Homology
BLAST of CmoCh02G011550 vs. ExPASy Swiss-Prot
Match: Q9STP8 (Acyl-CoA-binding domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=ACBP2 PE=1 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11 Identity = 49/101 (48.51%), Postives = 61/101 (60.40%), Query Frame = 0
BLAST of CmoCh02G011550 vs. ExPASy Swiss-Prot
Match: Q9SM23 (Acyl-CoA-binding domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=ACBP1 PE=1 SV=2) HSP 1 Score: 65.1 bits (157), Expect = 7.6e-10 Identity = 46/101 (45.54%), Postives = 63/101 (62.38%), Query Frame = 0
BLAST of CmoCh02G011550 vs. ExPASy Swiss-Prot
Match: A3AYR1 (Acyl-CoA-binding domain-containing protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=ACBP4 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.2e-08 Identity = 48/102 (47.06%), Postives = 58/102 (56.86%), Query Frame = 0
BLAST of CmoCh02G011550 vs. ExPASy TrEMBL
Match: A0A0A0KN62 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139300 PE=3 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.9e-24 Identity = 72/107 (67.29%), Postives = 79/107 (73.83%), Query Frame = 0
BLAST of CmoCh02G011550 vs. ExPASy TrEMBL
Match: A0A6J1I6A7 (acyl-CoA-binding domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471513 PE=3 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 9.6e-24 Identity = 74/113 (65.49%), Postives = 80/113 (70.80%), Query Frame = 0
BLAST of CmoCh02G011550 vs. ExPASy TrEMBL
Match: A0A6J1E3J3 (acyl-CoA-binding domain-containing protein 1-like isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111430271 PE=3 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 9.6e-24 Identity = 73/107 (68.22%), Postives = 78/107 (72.90%), Query Frame = 0
BLAST of CmoCh02G011550 vs. ExPASy TrEMBL
Match: A0A5D3C3R6 (Acyl-CoA-binding domain-containing protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00370 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.6e-23 Identity = 71/107 (66.36%), Postives = 78/107 (72.90%), Query Frame = 0
BLAST of CmoCh02G011550 vs. ExPASy TrEMBL
Match: A0A1S3AUK9 (acyl-CoA-binding domain-containing protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482974 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.6e-23 Identity = 71/107 (66.36%), Postives = 78/107 (72.90%), Query Frame = 0
BLAST of CmoCh02G011550 vs. NCBI nr
Match: KAG6605793.1 (Importin subunit beta-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 202.6 bits (514), Expect = 2.3e-48 Identity = 108/112 (96.43%), Postives = 109/112 (97.32%), Query Frame = 0
BLAST of CmoCh02G011550 vs. NCBI nr
Match: XP_011654606.1 (acyl-CoA-binding domain-containing protein 1 isoform X2 [Cucumis sativus]) HSP 1 Score: 122.1 bits (305), Expect = 4.0e-24 Identity = 72/107 (67.29%), Postives = 79/107 (73.83%), Query Frame = 0
BLAST of CmoCh02G011550 vs. NCBI nr
Match: XP_004145936.1 (acyl-CoA-binding domain-containing protein 1 isoform X1 [Cucumis sativus] >KGN49852.1 hypothetical protein Csa_000589 [Cucumis sativus]) HSP 1 Score: 122.1 bits (305), Expect = 4.0e-24 Identity = 72/107 (67.29%), Postives = 79/107 (73.83%), Query Frame = 0
BLAST of CmoCh02G011550 vs. NCBI nr
Match: XP_023551544.1 (acyl-CoA-binding domain-containing protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 120.2 bits (300), Expect = 1.5e-23 Identity = 74/112 (66.07%), Postives = 79/112 (70.54%), Query Frame = 0
BLAST of CmoCh02G011550 vs. NCBI nr
Match: XP_022922221.1 (acyl-CoA-binding domain-containing protein 1-like isoform X5 [Cucurbita moschata]) HSP 1 Score: 119.8 bits (299), Expect = 2.0e-23 Identity = 73/107 (68.22%), Postives = 78/107 (72.90%), Query Frame = 0
BLAST of CmoCh02G011550 vs. TAIR 10
Match: AT4G27780.1 (acyl-CoA binding protein 2 ) HSP 1 Score: 71.2 bits (173), Expect = 7.5e-13 Identity = 49/101 (48.51%), Postives = 61/101 (60.40%), Query Frame = 0
BLAST of CmoCh02G011550 vs. TAIR 10
Match: AT5G53470.1 (acyl-CoA binding protein 1 ) HSP 1 Score: 65.1 bits (157), Expect = 5.4e-11 Identity = 46/101 (45.54%), Postives = 63/101 (62.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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