CmoCh02G010790 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G010790
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	remorin-like
Location	Cmo_Chr02: 6573333 .. 6574634 (-)
RNA-Seq Expression	CmoCh02G010790
Synteny	CmoCh02G010790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGATGCCAACTCACATTAAGTAATATGTAACCATCATCCAGCTCAGTCTTCAACACAACCAACAGTTTCCCCACTTTCCCCTTCCTCCTCCCTCCTTTCCTCCCAGATTTCCCCCATGGCTGACGCTTCCAACAACCCCGAATCGGCGGCGCCACCCTCCAATCCTCCGCCCCAACCGGCCGAAGAAGAAGCCTCCAAAGACGTCGCCGAGGAGAAAGCTGTAATTCCACCTCCCCCTCCACCCGTCGAAGACAAGCCCGACGACTCCAAAGCCCTTGTTCTAGTTGAAAGTAAATAATCAACAAACCCACCTTTTATTTCATGTGTTTTACATAAATCCATCGTTAATTTTCAGCTCGGAGTTGAATTTAGGGCTTTTTAATCGATTATCTTGCTCTGTTATTCTCTGTGTTCTGTTCTTGTGTTCTTCAGAGGTTTCAGAACCAGATGAACCCAAATCCACCGAGGGCTCTGTAAACAGAGGTCTTAATTACAAAAACCCTTAATTCTTTTCTTAATTATTGTTTGTTTCAATGAAATTTAAGAATTAATTTAATTGTTCAGATGCTGTTCTAGCAAAAGTTGCAACAGAGAAGAGGTTGTCGCTGATTAAAGCTTGGGAAGAAAGCGAGAAATCAAAGGCTGAAAACAAGTAAGATTGTTTCATTTCCTCACCATTCTCTTCGATTTCGTTTTGAAATTGAAATTCACTGAAACCCCTTTGAGCAGAGCTCACAAGAAGCTGTCCTCTGTCGTGGCATGGGAGAATAGCAGAAAAGCGTCTGTGGAGGCTGAGTTGAAGAAGATTGAGGTACCCATTGCTCTGTTCGGCTACCCATTTTGGGTGTCTTTTTTGGGGTTTGGTTAACTGTACGGGAATTTGATTTGCAGGAAAGCTTGGAGAAGAAGAAGGCTGAATACGTTGAGAAAATGAAGAACAGAATTGCTCTGCTTCACAAATCTGCGGAGGAGAAGAGGGCGGTGATCGAAGCTATGCGCGGAGAGGATCTTCTGAAGGCGGAGGAGACGGCGGCGAAGTATCGCGCCACTGGTACTGCACCGAAGAAGCTTTTTGGGTGCTTTTAGAACTGAATGTGTCTGGTCTGATCACTGATTAGTGTTCGTGTCTTGAAATGTTCTTATTATTTGGTTGTTCTTGTTGTTTGTGGTTGATTTATTGGTGTGTTTAGTGAAGGGGTTTATTTATTTTTAATTGTTTGTGAATATGATATTTGGACCAACATTACTTTGAATGTAAATCATTGTTAAATGTTTGTTAAGATATTTTATTAGACAGTAC

mRNA sequence

TATGATGCCAACTCACATTAAGTAATATGTAACCATCATCCAGCTCAGTCTTCAACACAACCAACAGTTTCCCCACTTTCCCCTTCCTCCTCCCTCCTTTCCTCCCAGATTTCCCCCATGGCTGACGCTTCCAACAACCCCGAATCGGCGGCGCCACCCTCCAATCCTCCGCCCCAACCGGCCGAAGAAGAAGCCTCCAAAGACGTCGCCGAGGAGAAAGCTGTAATTCCACCTCCCCCTCCACCCGTCGAAGACAAGCCCGACGACTCCAAAGCCCTTGTTCTAGTTGAAAAGGTTTCAGAACCAGATGAACCCAAATCCACCGAGGGCTCTGTAAACAGAGATGCTGTTCTAGCAAAAGTTGCAACAGAGAAGAGGTTGTCGCTGATTAAAGCTTGGGAAGAAAGCGAGAAATCAAAGGCTGAAAACAAAGCTCACAAGAAGCTGTCCTCTGTCGTGGCATGGGAGAATAGCAGAAAAGCGTCTGTGGAGGCTGAGTTGAAGAAGATTGAGGAAAGCTTGGAGAAGAAGAAGGCTGAATACGTTGAGAAAATGAAGAACAGAATTGCTCTGCTTCACAAATCTGCGGAGGAGAAGAGGGCGGTGATCGAAGCTATGCGCGGAGAGGATCTTCTGAAGGCGGAGGAGACGGCGGCGAAGTATCGCGCCACTGGTACTGCACCGAAGAAGCTTTTTGGGTGCTTTTAGAACTGAATGTGTCTGGTCTGATCACTGATTAGTGTTCGTGTCTTGAAATGTTCTTATTATTTGGTTGTTCTTGTTGTTTGTGGTTGATTTATTGGTGTGTTTAGTGAAGGGGTTTATTTATTTTTAATTGTTTGTGAATATGATATTTGGACCAACATTACTTTGAATGTAAATCATTGTTAAATGTTTGTTAAGATATTTTATTAGACAGTAC

Coding sequence (CDS)

ATGGCTGACGCTTCCAACAACCCCGAATCGGCGGCGCCACCCTCCAATCCTCCGCCCCAACCGGCCGAAGAAGAAGCCTCCAAAGACGTCGCCGAGGAGAAAGCTGTAATTCCACCTCCCCCTCCACCCGTCGAAGACAAGCCCGACGACTCCAAAGCCCTTGTTCTAGTTGAAAAGGTTTCAGAACCAGATGAACCCAAATCCACCGAGGGCTCTGTAAACAGAGATGCTGTTCTAGCAAAAGTTGCAACAGAGAAGAGGTTGTCGCTGATTAAAGCTTGGGAAGAAAGCGAGAAATCAAAGGCTGAAAACAAAGCTCACAAGAAGCTGTCCTCTGTCGTGGCATGGGAGAATAGCAGAAAAGCGTCTGTGGAGGCTGAGTTGAAGAAGATTGAGGAAAGCTTGGAGAAGAAGAAGGCTGAATACGTTGAGAAAATGAAGAACAGAATTGCTCTGCTTCACAAATCTGCGGAGGAGAAGAGGGCGGTGATCGAAGCTATGCGCGGAGAGGATCTTCTGAAGGCGGAGGAGACGGCGGCGAAGTATCGCGCCACTGGTACTGCACCGAAGAAGCTTTTTGGGTGCTTTTAG

Protein sequence

MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKVSEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYRATGTAPKKLFGCF

Homology

[Close]

BLAST of CmoCh02G010790 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.3e-57
Identity = 135/184 (73.37%), Postives = 156/184 (84.78%), Query Frame = 0


Query: 18  PPQPAEEEASKD-VAEEKAVIPPP-PPPVE--DKPDDSKALVLVE-KVSEPDEPKSTEGS 77
           PP P   EA K+ VA+EKA++ P  PPP E  +KPDDSKALV+VE K  EP + K  EGS
Sbjct: 16  PPAPGPVEAPKEVVADEKAIVAPALPPPAEEKEKPDDSKALVVVETKAPEPADEKK-EGS 75

Query: 78  VNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASVEAELKKIE 137
           ++RDAVLA+VATEKR+SLIKAWEESEKSKAENKA KK+S++ AWENS+KA++EAELKK+E
Sbjct: 76  IDRDAVLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKME 135

Query: 138 ESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYRATGTAPKKL 197
           E LEKKKAEY EKMKN+IALLHK AEEKRA+IEA RGEDLLKAEE AAKYRATGTAPKK+
Sbjct: 136 EQLEKKKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTAPKKI 195

[Close]

BLAST of CmoCh02G010790 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 9.8e-53
Identity = 128/193 (66.32%), Postives = 154/193 (79.79%), Query Frame = 0


Query: 9   ESAAPPSNPPPQPAEE-EASKDVA-EEKAVIPPP----PPPVEDKPDDSKALVLVEKVSE 68
           E+ + P+  P  P E+  A+ DVA +EK V PPP    P P E+K +DSKA+V V  V +
Sbjct: 11  ETVSEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPV--VPK 70

Query: 69  PDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKA 128
             E +  EGSVNRDAVLA+V TEKR+SLIKAWEE+EK K ENKA KKLSS+ +WEN++KA
Sbjct: 71  EVEEEKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKA 130

Query: 129 SVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKY 188
           +VEAELKK+EE LEKKKAEYVE+MKN+IA +HK AEEKRA+IEA RGE++LKAEE AAKY
Sbjct: 131 AVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKY 190

Query: 189 RATGTAPKKLFGC 196
           RATGTAPKKLFGC
Sbjct: 191 RATGTAPKKLFGC 201

[Close]

BLAST of CmoCh02G010790 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.5e-48
Identity = 119/190 (62.63%), Postives = 141/190 (74.21%), Query Frame = 0


Query: 8   PESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEK-VSEPDEP 67
           P  A  P+ P P P   + +KDVAEEK   PPP    E   DDSKAL +VEK V EP   
Sbjct: 28  PAPAEIPA-PAPAPTPADVTKDVAEEKIQNPPP----EQIFDDSKALTVVEKPVEEPAPA 87

Query: 68  KSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASVEA 127
           K    S++RD  LA ++ EKRLS ++AWEESEKSKAENKA KK++ V AWENS+KA+VEA
Sbjct: 88  KPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEA 147

Query: 128 ELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYRATG 187
           +LKKIEE LEKKKAEY E+MKN++A +HK AEE+RA+IEA RGED+LKAEETAAKYRATG
Sbjct: 148 QLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATG 207

Query: 188 TAPKKLFGCF 197
             PK   GCF
Sbjct: 208 IVPKATCGCF 212

[Close]

BLAST of CmoCh02G010790 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.1e-43
Identity = 110/191 (57.59%), Postives = 134/191 (70.16%), Query Frame = 0


Query: 7   NPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKVSEPDEP 66
           +P   AP   P P P E      VA+EK   PPP         +SKAL +VEK  E   P
Sbjct: 14  SPAVLAPAKEPTPAPVE------VADEKIHNPPPV--------ESKALAVVEKPIEEHTP 73

Query: 67  -KSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASVE 126
            K++ GS +RD +LA +  EK+ S IKAWEESEKSKAEN+A KK+S V AWENS+KA+VE
Sbjct: 74  KKASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVE 133

Query: 127 AELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYRAT 186
           A+L+KIEE LEKKKA+Y EKMKN++A +HK AEEKRA++EA +GE+LLKAEE  AKYRAT
Sbjct: 134 AQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRAT 190

Query: 187 GTAPKKLFGCF 197
           G  PK   GCF
Sbjct: 194 GVVPKATCGCF 190

[Close]

BLAST of CmoCh02G010790 vs. ExPASy Swiss-Prot
Match: Q7XII4 (Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.6e-09
Identity = 45/129 (34.88%), Postives = 67/129 (51.94%), Query Frame = 0


Query: 63  PDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKA 122
           P +  S  G    +  + +V  E+  S I AW+ +E +K  N+  ++   +  WE  +  
Sbjct: 184 PGDVSSAGGGHGDEVSVGQVKKEEVESKIAAWQIAEVAKVNNRFKREEVVINGWEGDQVE 243

Query: 123 SVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKY 182
              A LKK E  LE+K+A+ +EK +N +A   + AEEKRA  EA RG  + +  E A   
Sbjct: 244 KANAWLKKYERKLEEKRAKAMEKAQNEVAKARRKAEEKRASAEAKRGTKVARVLELANFM 303

Query: 183 RATGTAPKK 192
           RA G AP K
Sbjct: 304 RAVGRAPSK 312

[Close]

BLAST of CmoCh02G010790 vs. ExPASy TrEMBL
Match: A0A6J1H1B9 (remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111459182 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 9.1e-94
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180

Query: 181 KYRATGTAPKKLFGCF 197
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of CmoCh02G010790 vs. ExPASy TrEMBL
Match: A0A6J1K1B5 (remorin-like OS=Cucurbita maxima OX=3661 GN=LOC111490815 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.2e-90
Identity = 191/196 (97.45%), Postives = 192/196 (97.96%), Query Frame = 0


Query: 1   MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNPESAAPPSNPPPQPAEEEA KDVAEEKAVIPPPPPPVEDKPDDSKALV VE+ 
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVPVEQY 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEE AA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEEMAA 180

Query: 181 KYRATGTAPKKLFGCF 197
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of CmoCh02G010790 vs. ExPASy TrEMBL
Match: A0A6J1DYY5 (remorin-like OS=Momordica charantia OX=3673 GN=LOC111025889 PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.2e-72
Identity = 165/199 (82.91%), Postives = 173/199 (86.93%), Query Frame = 0


Query: 1   MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVI--PPPPPPVEDKP-DDSKALVLV 60
           MA+ S NPES  PP+        EE  KDVAEEK VI  PPPPPP EDKP DDSKALVLV
Sbjct: 1   MAEESKNPESTPPPA--------EEVPKDVAEEKTVIPPPPPPPPAEDKPADDSKALVLV 60

Query: 61  EKVSEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWE 120
           EKV E  EPKS EGSVNRD VLAKVATEKR+SLIKAWEESEKSKAENKAHKKLSSVVAWE
Sbjct: 61  EKVPEAAEPKSAEGSVNRDTVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWE 120

Query: 121 NSRKASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEE 180
           NS+KASVEAELKKIEESLEKKKAEY+EKMKN+IALLHK+AEEKRA+IEA RGEDLLKAEE
Sbjct: 121 NSKKASVEAELKKIEESLEKKKAEYIEKMKNKIALLHKTAEEKRAIIEAKRGEDLLKAEE 180

Query: 181 TAAKYRATGTAPKKLFGCF 197
           TAAKYRATGTAPKKL GCF
Sbjct: 181 TAAKYRATGTAPKKLLGCF 191

[Close]

BLAST of CmoCh02G010790 vs. ExPASy TrEMBL
Match: A0A1S3CPW1 (remorin OS=Cucumis melo OX=3656 GN=LOC103503454 PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 5.7e-72
Identity = 166/196 (84.69%), Postives = 174/196 (88.78%), Query Frame = 0


Query: 1   MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MA+ S   ES  PPS+PPP P  EE  KDVAEEK+VIPPPP   EDK DDSKALVLVEKV
Sbjct: 1   MAEESKKIES-PPPSDPPP-PPPEELPKDVAEEKSVIPPPP---EDKTDDSKALVLVEKV 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
            E  +PKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSV AWENS+
Sbjct: 61  PEVADPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVAAWENSK 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKK EY+EKMKN+IALLHKSAEEKRA+IEA RGEDLLKAEETAA
Sbjct: 121 KASVEAELKKIEESLEKKKGEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAA 180

Query: 181 KYRATGTAPKKLFGCF 197
           KYRATGTAPKKL GCF
Sbjct: 181 KYRATGTAPKKLLGCF 191

[Close]

BLAST of CmoCh02G010790 vs. ExPASy TrEMBL
Match: A0A6J1GJE1 (remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111454820 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.6e-69
Identity = 158/196 (80.61%), Postives = 169/196 (86.22%), Query Frame = 0


Query: 9   ESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPP--------PVEDKPDDSKALVLVEKV 68
           + + PPS+PPP P  +E  KDVAEEK VIPPPPP        P E K DDSKALVLVEKV
Sbjct: 3   DQSTPPSDPPP-PPPQELPKDVAEEKTVIPPPPPSAPVPAPTPAEHKTDDSKALVLVEKV 62

Query: 69  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 128
            E  E KS+EGSVNRDAVLAKVATEKR+SLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 63  PEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 122

Query: 129 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 188
           KASVEAELKKIEE+LEKKKAEY+EKMKN+IALLHK AEEKRA+IEA RGE+LLKAEETAA
Sbjct: 123 KASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAA 182

Query: 189 KYRATGTAPKKLFGCF 197
           KYRATGTAPKKL  CF
Sbjct: 183 KYRATGTAPKKLLSCF 197

[Close]

BLAST of CmoCh02G010790 vs. NCBI nr
Match: XP_022957725.1 (remorin-like [Cucurbita moschata])

HSP 1 Score: 352.8 bits (904), Expect = 1.9e-93
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180

Query: 181 KYRATGTAPKKLFGCF 197
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of CmoCh02G010790 vs. NCBI nr
Match: XP_023532341.1 (remorin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.9 bits (899), Expect = 7.1e-93
Identity = 195/196 (99.49%), Postives = 195/196 (99.49%), Query Frame = 0


Query: 1   MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNPESAAPPSNPPPQPAEEEA KDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180

Query: 181 KYRATGTAPKKLFGCF 197
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of CmoCh02G010790 vs. NCBI nr
Match: KAG7035629.1 (hypothetical protein SDJN02_02427 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 347.1 bits (889), Expect = 1.0e-91
Identity = 193/196 (98.47%), Postives = 194/196 (98.98%), Query Frame = 0


Query: 1   MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNP +AAPPSNPPPQPAEEEA KDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV
Sbjct: 1   MADASNNPVTAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180

Query: 181 KYRATGTAPKKLFGCF 197
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of CmoCh02G010790 vs. NCBI nr
Match: KAG6605721.1 (hypothetical protein SDJN03_03038, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 346.3 bits (887), Expect = 1.8e-91
Identity = 193/196 (98.47%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 1   MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNP SAAPPSNPPPQPAEEEA KDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV
Sbjct: 1   MADASNNPVSAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKM NRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180

Query: 181 KYRATGTAPKKLFGCF 197
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of CmoCh02G010790 vs. NCBI nr
Match: XP_022995196.1 (remorin-like [Cucurbita maxima])

HSP 1 Score: 342.4 bits (877), Expect = 2.5e-90
Identity = 191/196 (97.45%), Postives = 192/196 (97.96%), Query Frame = 0


Query: 1   MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNPESAAPPSNPPPQPAEEEA KDVAEEKAVIPPPPPPVEDKPDDSKALV VE+ 
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVPVEQY 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEE AA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEEMAA 180

Query: 181 KYRATGTAPKKLFGCF 197
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of CmoCh02G010790 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein )

HSP 1 Score: 208.4 bits (529), Expect = 5.3e-54
Identity = 129/194 (66.49%), Postives = 155/194 (79.90%), Query Frame = 0


Query: 9   ESAAPPSNPPPQPAEE-EASKDVA-EEKAVIPPP----PPPVEDKPDDSKALV-LVEKVS 68
           E+ + P+  P  P E+  A+ DVA +EK V PPP    P P E+K +DSKA+V +V KV 
Sbjct: 11  ETVSEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPVVPKVE 70

Query: 69  EPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRK 128
           E    +  EGSVNRDAVLA+V TEKR+SLIKAWEE+EK K ENKA KKLSS+ +WEN++K
Sbjct: 71  E----EKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKK 130

Query: 129 ASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAK 188
           A+VEAELKK+EE LEKKKAEYVE+MKN+IA +HK AEEKRA+IEA RGE++LKAEE AAK
Sbjct: 131 AAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAK 190

Query: 189 YRATGTAPKKLFGC 196
           YRATGTAPKKLFGC
Sbjct: 191 YRATGTAPKKLFGC 200

[Close]

BLAST of CmoCh02G010790 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 208.0 bits (528), Expect = 6.9e-54
Identity = 128/193 (66.32%), Postives = 154/193 (79.79%), Query Frame = 0


Query: 9   ESAAPPSNPPPQPAEE-EASKDVA-EEKAVIPPP----PPPVEDKPDDSKALVLVEKVSE 68
           E+ + P+  P  P E+  A+ DVA +EK V PPP    P P E+K +DSKA+V V  V +
Sbjct: 11  ETVSEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPV--VPK 70

Query: 69  PDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKA 128
             E +  EGSVNRDAVLA+V TEKR+SLIKAWEE+EK K ENKA KKLSS+ +WEN++KA
Sbjct: 71  EVEEEKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKA 130

Query: 129 SVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKY 188
           +VEAELKK+EE LEKKKAEYVE+MKN+IA +HK AEEKRA+IEA RGE++LKAEE AAKY
Sbjct: 131 AVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKY 190

Query: 189 RATGTAPKKLFGC 196
           RATGTAPKKLFGC
Sbjct: 191 RATGTAPKKLFGC 201

[Close]

BLAST of CmoCh02G010790 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein )

HSP 1 Score: 200.3 bits (508), Expect = 1.4e-51
Identity = 117/173 (67.63%), Postives = 133/173 (76.88%), Query Frame = 0


Query: 24  EEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKVSEPDEPKSTEGSVNRDAVLAKVA 83
           EE  K +  E     P PP  E+K DDSKA+VLV    EP E K   GSV+RDAVL ++ 
Sbjct: 4   EEQKKVIMPEAVASEPSPPSKEEKSDDSKAIVLVVAAKEPTEDKKV-GSVHRDAVLVRLE 63

Query: 84  TEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASVEAELKKIEESLEKKKAEYV 143
            +KR+SLIKAWEE+EKSK ENKA KK+SSV AWENS+KASVEAELKKIEE L KKKA Y 
Sbjct: 64  QDKRISLIKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKKIEEQLNKKKAHYT 123

Query: 144 EKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYRATGTAPKKLFGCF 197
           E+MKN+IA +HK AEEKRA+ EA RGED+LKAEE AAKYRATGTAP KLFG F
Sbjct: 124 EQMKNKIAQIHKEAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPTKLFGFF 175

[Close]

BLAST of CmoCh02G010790 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 194.1 bits (492), Expect = 1.0e-49
Identity = 119/190 (62.63%), Postives = 141/190 (74.21%), Query Frame = 0


Query: 8   PESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEK-VSEPDEP 67
           P  A  P+ P P P   + +KDVAEEK   PPP    E   DDSKAL +VEK V EP   
Sbjct: 28  PAPAEIPA-PAPAPTPADVTKDVAEEKIQNPPP----EQIFDDSKALTVVEKPVEEPAPA 87

Query: 68  KSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASVEA 127
           K    S++RD  LA ++ EKRLS ++AWEESEKSKAENKA KK++ V AWENS+KA+VEA
Sbjct: 88  KPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEA 147

Query: 128 ELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYRATG 187
           +LKKIEE LEKKKAEY E+MKN++A +HK AEE+RA+IEA RGED+LKAEETAAKYRATG
Sbjct: 148 QLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATG 207

Query: 188 TAPKKLFGCF 197
             PK   GCF
Sbjct: 208 IVPKATCGCF 212

[Close]

BLAST of CmoCh02G010790 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein )

HSP 1 Score: 177.9 bits (450), Expect = 7.7e-45
Identity = 110/191 (57.59%), Postives = 134/191 (70.16%), Query Frame = 0


Query: 7   NPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKVSEPDEP 66
           +P   AP   P P P E      VA+EK   PPP         +SKAL +VEK  E   P
Sbjct: 14  SPAVLAPAKEPTPAPVE------VADEKIHNPPPV--------ESKALAVVEKPIEEHTP 73

Query: 67  -KSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASVE 126
            K++ GS +RD +LA +  EK+ S IKAWEESEKSKAEN+A KK+S V AWENS+KA+VE
Sbjct: 74  KKASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVE 133

Query: 127 AELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYRAT 186
           A+L+KIEE LEKKKA+Y EKMKN++A +HK AEEKRA++EA +GE+LLKAEE  AKYRAT
Sbjct: 134 AQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRAT 190

Query: 187 GTAPKKLFGCF 197
           G  PK   GCF
Sbjct: 194 GVVPKATCGCF 190

The following BLAST results are available for this feature:

BLAST of CmoCh02G010790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93788	1.3e-57	73.37	Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]
Q9FFA5	9.8e-53	66.32	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]
Q9M2D8	1.5e-48	62.63	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
O80837	1.1e-43	57.59	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]
Q7XII4	6.6e-09	34.88	Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1	[more]

BLAST of CmoCh02G010790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1B9	9.1e-94	100.00	remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111459182 PE=3 SV=1	[more]
A0A6J1K1B5	1.2e-90	97.45	remorin-like OS=Cucurbita maxima OX=3661 GN=LOC111490815 PE=3 SV=1	[more]
A0A6J1DYY5	1.2e-72	82.91	remorin-like OS=Momordica charantia OX=3673 GN=LOC111025889 PE=3 SV=1	[more]
A0A1S3CPW1	5.7e-72	84.69	remorin OS=Cucumis melo OX=3656 GN=LOC103503454 PE=3 SV=1	[more]
A0A6J1GJE1	1.6e-69	80.61	remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111454820 PE=3 SV=1	[more]

BLAST of CmoCh02G010790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957725.1	1.9e-93	100.00	remorin-like [Cucurbita moschata]	[more]
XP_023532341.1	7.1e-93	99.49	remorin-like [Cucurbita pepo subsp. pepo]	[more]
KAG7035629.1	1.0e-91	98.47	hypothetical protein SDJN02_02427 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6605721.1	1.8e-91	98.47	hypothetical protein SDJN03_03038, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022995196.1	2.5e-90	97.45	remorin-like [Cucurbita maxima]	[more]

BLAST of CmoCh02G010790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23750.2	5.3e-54	66.49	Remorin family protein	[more]
AT5G23750.1	6.9e-54	66.32	Remorin family protein	[more]
AT3G48940.1	1.4e-51	67.63	Remorin family protein	[more]
AT3G61260.1	1.0e-49	62.63	Remorin family protein	[more]
AT2G45820.1	7.7e-45	57.59	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..71
None	No IPR available	PANTHER	PTHR31775:SF5	REMORIN 1.4	coord: 8..196
None	No IPR available	PANTHER	PTHR31775	OS02G0117200 PROTEIN	coord: 8..196
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 86..191 e-value: 1.7E-31 score: 108.2
IPR005518	Remorin, N-terminal	PFAM	PF03766	Remorin_N	coord: 28..82 e-value: 8.2E-23 score: 80.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G010790.1	CmoCh02G010790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress