CmoCh02G009870 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G009870
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Gag protease polyprotein
Location	Cmo_Chr02: 6077416 .. 6078030 (+)
RNA-Seq Expression	CmoCh02G009870
Synteny	CmoCh02G009870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGAGAAATTCGTTGACTTAGCGCACCTAGAAAAAGAACCTTTAGAGACCATTCTATCAGTATCCACCCCTGCTCACGAGTTATTAATGGCTACTCATAGAGTTAAGGGGGGTAATGTGATAGTGTCGGGACGTGTCATAAAAGCTGTGTTAATAGTACTAAGCATGCAAGACTTCAATGTCATTTTGGGTATGGATTGGCTAGGCGAGAATCATGCTCTAATAGATTGTGAAACTCAAATAGTTACTCTCAGACTCTCGTCAGGGGATAGTTTTACATATGAGGGAGCCACTTCCAAAAGAACTCTAAGCGTCGTAACTGCACTAAAGGCTAGAAAGATGATCTGCGGTGGTGCAAGCGCATTTTTAGTCAGTGTGACCCTAGACTGTAGTAATGAACAGACAGTCTCATCAGTACACATTGTCAGGGAATTCACTGATGTTTTTCCTAAAGATTTGCCAAGTTTGCCCCCTGTTAGGGAAGTTGACTTCGGGATCAACCTAGAATTAGGAACTGCGCCGATCTCTAAGGCACCCTACAGAATGGCACGTGCAGAACTCAGGGAATTGGAGGAACAGTTACAGGAGCTATTGGATAAGGGTTTCATATGA

mRNA sequence

ATGTCTGAGAAATTCGTTGACTTAGCGCACCTAGAAAAAGAACCTTTAGAGACCATTCTATCAGTATCCACCCCTGCTCACGAGTTATTAATGGCTACTCATAGAGTTAAGGGGGGTAATGTGATAGTGTCGGGACGTGTCATAAAAGCTGTGTTAATAGTACTAAGCATGCAAGACTTCAATGTCATTTTGGGTATGGATTGGCTAGGCGAGAATCATGCTCTAATAGATTGTGAAACTCAAATAGTTACTCTCAGACTCTCGTCAGGGGATAGTTTTACATATGAGGGAGCCACTTCCAAAAGAACTCTAAGCGTCGTAACTGCACTAAAGGCTAGAAAGATGATCTGCGGTGGTGCAAGCGCATTTTTAGTCAGTGTGACCCTAGACTGTAGTAATGAACAGACAGTCTCATCAGTACACATTGTCAGGGAATTCACTGATGTTTTTCCTAAAGATTTGCCAAGTTTGCCCCCTGTTAGGGAAGTTGACTTCGGGATCAACCTAGAATTAGGAACTGCGCCGATCTCTAAGGCACCCTACAGAATGGCACGTGCAGAACTCAGGGAATTGGAGGAACAGTTACAGGAGCTATTGGATAAGGGTTTCATATGA

Coding sequence (CDS)

ATGTCTGAGAAATTCGTTGACTTAGCGCACCTAGAAAAAGAACCTTTAGAGACCATTCTATCAGTATCCACCCCTGCTCACGAGTTATTAATGGCTACTCATAGAGTTAAGGGGGGTAATGTGATAGTGTCGGGACGTGTCATAAAAGCTGTGTTAATAGTACTAAGCATGCAAGACTTCAATGTCATTTTGGGTATGGATTGGCTAGGCGAGAATCATGCTCTAATAGATTGTGAAACTCAAATAGTTACTCTCAGACTCTCGTCAGGGGATAGTTTTACATATGAGGGAGCCACTTCCAAAAGAACTCTAAGCGTCGTAACTGCACTAAAGGCTAGAAAGATGATCTGCGGTGGTGCAAGCGCATTTTTAGTCAGTGTGACCCTAGACTGTAGTAATGAACAGACAGTCTCATCAGTACACATTGTCAGGGAATTCACTGATGTTTTTCCTAAAGATTTGCCAAGTTTGCCCCCTGTTAGGGAAGTTGACTTCGGGATCAACCTAGAATTAGGAACTGCGCCGATCTCTAAGGCACCCTACAGAATGGCACGTGCAGAACTCAGGGAATTGGAGGAACAGTTACAGGAGCTATTGGATAAGGGTTTCATATGA

Protein sequence

MSEKFVDLAHLEKEPLETILSVSTPAHELLMATHRVKGGNVIVSGRVIKAVLIVLSMQDFNVILGMDWLGENHALIDCETQIVTLRLSSGDSFTYEGATSKRTLSVVTALKARKMICGGASAFLVSVTLDCSNEQTVSSVHIVREFTDVFPKDLPSLPPVREVDFGINLELGTAPISKAPYRMARAELRELEEQLQELLDKGFI

Homology

[Close]

BLAST of CmoCh02G009870 vs. ExPASy TrEMBL
Match: A0A6J1H2K9 (uncharacterized protein LOC111459523 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459523 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.3e-106
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MSEKFVDLAHLEKEPLETILSVSTPAHELLMATHRVKGGNVIVSGRVIKAVLIVLSMQDF 60
           MSEKFVDLAHLEKEPLETILSVSTPAHELLMATHRVKGGNVIVSGRVIKAVLIVLSMQDF
Sbjct: 1   MSEKFVDLAHLEKEPLETILSVSTPAHELLMATHRVKGGNVIVSGRVIKAVLIVLSMQDF 60

Query: 61  NVILGMDWLGENHALIDCETQIVTLRLSSGDSFTYEGATSKRTLSVVTALKARKMICGGA 120
           NVILGMDWLGENHALIDCETQIVTLRLSSGDSFTYEGATSKRTLSVVTALKARKMICGGA
Sbjct: 61  NVILGMDWLGENHALIDCETQIVTLRLSSGDSFTYEGATSKRTLSVVTALKARKMICGGA 120

Query: 121 SAFLVSVTLDCSNEQTVSSVHIVREFTDVFPKDLPSLPPVREVDFGINLELGTAPISKAP 180
           SAFLVSVTLDCSNEQTVSSVHIVREFTDVFPKDLPSLPPVREVDFGINLELGTAPISKAP
Sbjct: 121 SAFLVSVTLDCSNEQTVSSVHIVREFTDVFPKDLPSLPPVREVDFGINLELGTAPISKAP 180

Query: 181 YRMARAELRELEEQLQELLDKGFI 205
           YRMARAELRELEEQLQELLDKGFI
Sbjct: 181 YRMARAELRELEEQLQELLDKGFI 204

[Close]

BLAST of CmoCh02G009870 vs. ExPASy TrEMBL
Match: A0A6J1GZS7 (uncharacterized protein LOC111458730 OS=Cucurbita moschata OX=3662 GN=LOC111458730 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.9e-82
Identity = 166/198 (83.84%), Postives = 175/198 (88.38%), Query Frame = 0


Query: 7   DLAHLEKEPLETILSVSTPAHELLMATHRVKGGNVIVSGRVIKAVLIVLSMQDFNVILGM 66
           D    EKEPLETILSVSTPAHELLMATHRVKGG+V VSGRVI+A LIVLSM DF+VILGM
Sbjct: 454 DAVVTEKEPLETILSVSTPAHELLMATHRVKGGSVTVSGRVIEATLIVLSMLDFDVILGM 513

Query: 67  DWLGENHALIDCETQIVTLRLSSGDSFTYEGATSKRTLSVVTALKARKMICGGASAFLVS 126
           DWLGEN ALIDCET+IVTLRL SGDSFTY+G   KRT SVVTALKA+KMI  GASAFL S
Sbjct: 514 DWLGENRALIDCETRIVTLRLPSGDSFTYKGVIPKRTPSVVTALKAKKMIRNGASAFLAS 573

Query: 127 VTLDCSNEQTVSSVHIVREFTDVFPKDLPSLPPVREVDFGINLELGTAPISKAPYRMARA 186
           VTLD  N Q VSSVHIVREF DVFP+DLPSLPPVREVDFGI+LE GTAPISKAPYRMA A
Sbjct: 574 VTLDSRNGQAVSSVHIVREFIDVFPEDLPSLPPVREVDFGIDLEPGTAPISKAPYRMAPA 633

Query: 187 ELRELEEQLQELLDKGFI 205
           ELREL+EQLQELLDKGFI
Sbjct: 634 ELRELKEQLQELLDKGFI 651

[Close]

BLAST of CmoCh02G009870 vs. ExPASy TrEMBL
Match: A0A6J1F3W3 (uncharacterized protein LOC111439772 OS=Cucurbita moschata OX=3662 GN=LOC111439772 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 3.2e-73
Identity = 147/197 (74.62%), Postives = 165/197 (83.76%), Query Frame = 0


Query: 7   DLAHLEKEPLETILSVSTPAHELLMATHRVKGGNVIVSGRVIKAVLIVLSMQDFNVILGM 66
           D    EKE LE  LSVSTP HELL+ATH++KGG V +SGRVI+A LIVLSMQDF+VILGM
Sbjct: 382 DTVVTEKELLEITLSVSTPTHELLLATHKIKGGGVTISGRVIEATLIVLSMQDFDVILGM 441

Query: 67  DWLGENHALIDCETQIVTLRLSSGDSFTYEGATSKRTLSVVTALKARKMICGGASAFLVS 126
           DWLGEN  LIDCET+IVTLRL S DSFTY+G TSK   SV+T L+A+K+I  GASAFL S
Sbjct: 442 DWLGENRVLIDCETRIVTLRLPSRDSFTYKGPTSKGFPSVITPLRAKKLIHSGASAFLAS 501

Query: 127 VTLDCSNEQTVSSVHIVREFTDVFPKDLPSLPPVREVDFGINLELGTAPISKAPYRMARA 186
           VTLD SN+Q  SSVHI+REF DVFP+DLP LP +REVDFGI+LE GT PISKAPYRMA A
Sbjct: 502 VTLDNSNKQITSSVHIIREFVDVFPEDLPGLPSIREVDFGIDLEPGTVPISKAPYRMALA 561

Query: 187 ELRELEEQLQELLDKGF 204
           ELREL+EQLQELLDKGF
Sbjct: 562 ELRELKEQLQELLDKGF 578

[Close]

BLAST of CmoCh02G009870 vs. ExPASy TrEMBL
Match: A0A6J1EMX1 (uncharacterized protein LOC111434030 OS=Cucurbita moschata OX=3662 GN=LOC111434030 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.5e-72
Identity = 145/195 (74.36%), Postives = 168/195 (86.15%), Query Frame = 0


Query: 1   MSEKFVDLAHLEKEPLETILSVSTPAHELLMATHRVKGGNVIVSGRVIKAVLIVLSMQDF 60
           +SE+FV+LA LEKE LE+ LSVSTPAH+LL+ATHRVKGG V ++GRVI+A LIVLSMQDF
Sbjct: 409 VSEEFVELAQLEKELLESTLSVSTPAHKLLLATHRVKGGGVTIAGRVIEATLIVLSMQDF 468

Query: 61  NVILGMDWLGENHALIDCETQIVTLRLSSGDSFTYEGATSKRTLSVVTALKARKMICGGA 120
           +VILGMDWLGEN  LIDCET+IVTLRL SGDSFTY+GATSK   SV+T+L+A+K+I  GA
Sbjct: 469 DVILGMDWLGENRVLIDCETRIVTLRLPSGDSFTYKGATSKGVPSVITSLRAKKLIRSGA 528

Query: 121 SAFLVSVTLDCSNEQTVSSVHIVREFTDVFPKDLPSLPPVREVDFGINLELGTAPISKAP 180
            AFL  VTLD SN+Q  SSVHIVREF DVFP+DL  LPP +EV+FGI+LE GT PISKAP
Sbjct: 529 IAFLAGVTLDNSNKQKPSSVHIVREFVDVFPEDLSGLPPAKEVNFGIDLEPGTVPISKAP 588

Query: 181 YRMARAELRELEEQL 196
           YRMA AELREL+EQL
Sbjct: 589 YRMAPAELRELKEQL 603

[Close]

BLAST of CmoCh02G009870 vs. ExPASy TrEMBL
Match: A0A6J1EZM7 (uncharacterized protein LOC111438026 OS=Cucurbita moschata OX=3662 GN=LOC111438026 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.8e-68
Identity = 142/195 (72.82%), Postives = 161/195 (82.56%), Query Frame = 0


Query: 1   MSEKFVDLAHLEKEPLETILSVSTPAHELLMATHRVKGGNVIVSGRVIKAVLIVLSMQDF 60
           +SE+FV+LA LEKE LE  LSVSTPAHELL+ATHRVKGG V ++GRVI+A LIVL MQDF
Sbjct: 471 VSEEFVELAQLEKELLEITLSVSTPAHELLLATHRVKGGGVTIAGRVIEATLIVLRMQDF 530

Query: 61  NVILGMDWLGENHALIDCETQIVTLRLSSGDSFTYEGATSKRTLSVVTALKARKMICGGA 120
           +VILGMDWLG N  LIDCET+IVTLRL SGD FTY+GATSK   SV+T+L+A+K+I  GA
Sbjct: 531 DVILGMDWLGGNRVLIDCETRIVTLRLPSGDIFTYKGATSKGVQSVITSLRAKKLIRSGA 590

Query: 121 SAFLVSVTLDCSNEQTVSSVHIVREFTDVFPKDLPSLPPVREVDFGINLELGTAPISKAP 180
            AFL SVTLD SN+Q  SSVHIVREF DVFP+DLP LPP REVDFGI+LE GT PISKAP
Sbjct: 591 IAFLASVTLDNSNKQKTSSVHIVREFVDVFPEDLPGLPPAREVDFGIDLEPGTVPISKAP 650

Query: 181 YRMARAELRELEEQL 196
                 ELREL+EQL
Sbjct: 651 -----VELRELKEQL 660

[Close]

BLAST of CmoCh02G009870 vs. NCBI nr
Match: XP_022958237.1 (uncharacterized protein LOC111459523 isoform X1 [Cucurbita moschata] >XP_022958238.1 uncharacterized protein LOC111459523 isoform X1 [Cucurbita moschata])

HSP 1 Score: 395.6 bits (1015), Expect = 2.6e-106
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MSEKFVDLAHLEKEPLETILSVSTPAHELLMATHRVKGGNVIVSGRVIKAVLIVLSMQDF 60
           MSEKFVDLAHLEKEPLETILSVSTPAHELLMATHRVKGGNVIVSGRVIKAVLIVLSMQDF
Sbjct: 1   MSEKFVDLAHLEKEPLETILSVSTPAHELLMATHRVKGGNVIVSGRVIKAVLIVLSMQDF 60

Query: 61  NVILGMDWLGENHALIDCETQIVTLRLSSGDSFTYEGATSKRTLSVVTALKARKMICGGA 120
           NVILGMDWLGENHALIDCETQIVTLRLSSGDSFTYEGATSKRTLSVVTALKARKMICGGA
Sbjct: 61  NVILGMDWLGENHALIDCETQIVTLRLSSGDSFTYEGATSKRTLSVVTALKARKMICGGA 120

Query: 121 SAFLVSVTLDCSNEQTVSSVHIVREFTDVFPKDLPSLPPVREVDFGINLELGTAPISKAP 180
           SAFLVSVTLDCSNEQTVSSVHIVREFTDVFPKDLPSLPPVREVDFGINLELGTAPISKAP
Sbjct: 121 SAFLVSVTLDCSNEQTVSSVHIVREFTDVFPKDLPSLPPVREVDFGINLELGTAPISKAP 180

Query: 181 YRMARAELRELEEQLQELLDKGFI 205
           YRMARAELRELEEQLQELLDKGFI
Sbjct: 181 YRMARAELRELEEQLQELLDKGFI 204

[Close]

BLAST of CmoCh02G009870 vs. NCBI nr
Match: XP_022957288.1 (uncharacterized protein LOC111458730 [Cucurbita moschata])

HSP 1 Score: 313.9 bits (803), Expect = 1.0e-81
Identity = 166/198 (83.84%), Postives = 175/198 (88.38%), Query Frame = 0


Query: 7   DLAHLEKEPLETILSVSTPAHELLMATHRVKGGNVIVSGRVIKAVLIVLSMQDFNVILGM 66
           D    EKEPLETILSVSTPAHELLMATHRVKGG+V VSGRVI+A LIVLSM DF+VILGM
Sbjct: 454 DAVVTEKEPLETILSVSTPAHELLMATHRVKGGSVTVSGRVIEATLIVLSMLDFDVILGM 513

Query: 67  DWLGENHALIDCETQIVTLRLSSGDSFTYEGATSKRTLSVVTALKARKMICGGASAFLVS 126
           DWLGEN ALIDCET+IVTLRL SGDSFTY+G   KRT SVVTALKA+KMI  GASAFL S
Sbjct: 514 DWLGENRALIDCETRIVTLRLPSGDSFTYKGVIPKRTPSVVTALKAKKMIRNGASAFLAS 573

Query: 127 VTLDCSNEQTVSSVHIVREFTDVFPKDLPSLPPVREVDFGINLELGTAPISKAPYRMARA 186
           VTLD  N Q VSSVHIVREF DVFP+DLPSLPPVREVDFGI+LE GTAPISKAPYRMA A
Sbjct: 574 VTLDSRNGQAVSSVHIVREFIDVFPEDLPSLPPVREVDFGIDLEPGTAPISKAPYRMAPA 633

Query: 187 ELRELEEQLQELLDKGFI 205
           ELREL+EQLQELLDKGFI
Sbjct: 634 ELRELKEQLQELLDKGFI 651

[Close]

BLAST of CmoCh02G009870 vs. NCBI nr
Match: XP_022933065.1 (uncharacterized protein LOC111439772 [Cucurbita moschata])

HSP 1 Score: 284.6 bits (727), Expect = 6.5e-73
Identity = 147/197 (74.62%), Postives = 165/197 (83.76%), Query Frame = 0


Query: 7   DLAHLEKEPLETILSVSTPAHELLMATHRVKGGNVIVSGRVIKAVLIVLSMQDFNVILGM 66
           D    EKE LE  LSVSTP HELL+ATH++KGG V +SGRVI+A LIVLSMQDF+VILGM
Sbjct: 382 DTVVTEKELLEITLSVSTPTHELLLATHKIKGGGVTISGRVIEATLIVLSMQDFDVILGM 441

Query: 67  DWLGENHALIDCETQIVTLRLSSGDSFTYEGATSKRTLSVVTALKARKMICGGASAFLVS 126
           DWLGEN  LIDCET+IVTLRL S DSFTY+G TSK   SV+T L+A+K+I  GASAFL S
Sbjct: 442 DWLGENRVLIDCETRIVTLRLPSRDSFTYKGPTSKGFPSVITPLRAKKLIHSGASAFLAS 501

Query: 127 VTLDCSNEQTVSSVHIVREFTDVFPKDLPSLPPVREVDFGINLELGTAPISKAPYRMARA 186
           VTLD SN+Q  SSVHI+REF DVFP+DLP LP +REVDFGI+LE GT PISKAPYRMA A
Sbjct: 502 VTLDNSNKQITSSVHIIREFVDVFPEDLPGLPSIREVDFGIDLEPGTVPISKAPYRMALA 561

Query: 187 ELRELEEQLQELLDKGF 204
           ELREL+EQLQELLDKGF
Sbjct: 562 ELRELKEQLQELLDKGF 578

[Close]

BLAST of CmoCh02G009870 vs. NCBI nr
Match: XP_022927095.1 (uncharacterized protein LOC111434030 [Cucurbita moschata])

HSP 1 Score: 281.2 bits (718), Expect = 7.2e-72
Identity = 145/195 (74.36%), Postives = 168/195 (86.15%), Query Frame = 0


Query: 1   MSEKFVDLAHLEKEPLETILSVSTPAHELLMATHRVKGGNVIVSGRVIKAVLIVLSMQDF 60
           +SE+FV+LA LEKE LE+ LSVSTPAH+LL+ATHRVKGG V ++GRVI+A LIVLSMQDF
Sbjct: 409 VSEEFVELAQLEKELLESTLSVSTPAHKLLLATHRVKGGGVTIAGRVIEATLIVLSMQDF 468

Query: 61  NVILGMDWLGENHALIDCETQIVTLRLSSGDSFTYEGATSKRTLSVVTALKARKMICGGA 120
           +VILGMDWLGEN  LIDCET+IVTLRL SGDSFTY+GATSK   SV+T+L+A+K+I  GA
Sbjct: 469 DVILGMDWLGENRVLIDCETRIVTLRLPSGDSFTYKGATSKGVPSVITSLRAKKLIRSGA 528

Query: 121 SAFLVSVTLDCSNEQTVSSVHIVREFTDVFPKDLPSLPPVREVDFGINLELGTAPISKAP 180
            AFL  VTLD SN+Q  SSVHIVREF DVFP+DL  LPP +EV+FGI+LE GT PISKAP
Sbjct: 529 IAFLAGVTLDNSNKQKPSSVHIVREFVDVFPEDLSGLPPAKEVNFGIDLEPGTVPISKAP 588

Query: 181 YRMARAELRELEEQL 196
           YRMA AELREL+EQL
Sbjct: 589 YRMAPAELRELKEQL 603

[Close]

BLAST of CmoCh02G009870 vs. NCBI nr
Match: XP_022931758.1 (uncharacterized protein LOC111438026 [Cucurbita moschata])

HSP 1 Score: 268.9 bits (686), Expect = 3.7e-68
Identity = 142/195 (72.82%), Postives = 161/195 (82.56%), Query Frame = 0


Query: 1   MSEKFVDLAHLEKEPLETILSVSTPAHELLMATHRVKGGNVIVSGRVIKAVLIVLSMQDF 60
           +SE+FV+LA LEKE LE  LSVSTPAHELL+ATHRVKGG V ++GRVI+A LIVL MQDF
Sbjct: 471 VSEEFVELAQLEKELLEITLSVSTPAHELLLATHRVKGGGVTIAGRVIEATLIVLRMQDF 530

Query: 61  NVILGMDWLGENHALIDCETQIVTLRLSSGDSFTYEGATSKRTLSVVTALKARKMICGGA 120
           +VILGMDWLG N  LIDCET+IVTLRL SGD FTY+GATSK   SV+T+L+A+K+I  GA
Sbjct: 531 DVILGMDWLGGNRVLIDCETRIVTLRLPSGDIFTYKGATSKGVQSVITSLRAKKLIRSGA 590

Query: 121 SAFLVSVTLDCSNEQTVSSVHIVREFTDVFPKDLPSLPPVREVDFGINLELGTAPISKAP 180
            AFL SVTLD SN+Q  SSVHIVREF DVFP+DLP LPP REVDFGI+LE GT PISKAP
Sbjct: 591 IAFLASVTLDNSNKQKTSSVHIVREFVDVFPEDLPGLPPAREVDFGIDLEPGTVPISKAP 650

Query: 181 YRMARAELRELEEQL 196
                 ELREL+EQL
Sbjct: 651 -----VELRELKEQL 660

The following BLAST results are available for this feature:

BLAST of CmoCh02G009870 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh02G009870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2K9	1.3e-106	100.00	uncharacterized protein LOC111459523 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GZS7	4.9e-82	83.84	uncharacterized protein LOC111458730 OS=Cucurbita moschata OX=3662 GN=LOC1114587...	[more]
A0A6J1F3W3	3.2e-73	74.62	uncharacterized protein LOC111439772 OS=Cucurbita moschata OX=3662 GN=LOC1114397...	[more]
A0A6J1EMX1	3.5e-72	74.36	uncharacterized protein LOC111434030 OS=Cucurbita moschata OX=3662 GN=LOC1114340...	[more]
A0A6J1EZM7	1.8e-68	72.82	uncharacterized protein LOC111438026 OS=Cucurbita moschata OX=3662 GN=LOC1114380...	[more]

BLAST of CmoCh02G009870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958237.1	2.6e-106	100.00	uncharacterized protein LOC111459523 isoform X1 [Cucurbita moschata] >XP_0229582...	[more]
XP_022957288.1	1.0e-81	83.84	uncharacterized protein LOC111458730 [Cucurbita moschata]	[more]
XP_022933065.1	6.5e-73	74.62	uncharacterized protein LOC111439772 [Cucurbita moschata]	[more]
XP_022927095.1	7.2e-72	74.36	uncharacterized protein LOC111434030 [Cucurbita moschata]	[more]
XP_022931758.1	3.7e-68	72.82	uncharacterized protein LOC111438026 [Cucurbita moschata]	[more]

BLAST of CmoCh02G009870 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 181..201
None	No IPR available	PFAM	PF08284	RVP_2	coord: 2..86 e-value: 1.2E-15 score: 57.5
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 155..204 e-value: 3.4E-7 score: 32.3
None	No IPR available	PANTHER	PTHR24559:SF330	RNA-DIRECTED DNA POLYMERASE HOMOLOG	coord: 18..204
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 18..204
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..94 e-value: 3.2E-10 score: 41.9
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 142..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G009870.1	CmoCh02G009870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0008270	zinc ion binding