CmoCh02G009800 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTATGTCGGTATCGTCGGATAAAGCGGTTTGGGATGCGATTATGAACAATGAAGCTGTGCAACAGCTGAGGAAGTCATTCTACGAAGGTTGGTGTTTTAAAACCATTCCCAACAAAAGAATCCATTGTCATGGTCATCAATCAAACTGTTGTTTTCTCTTTGCTTGCAGCAAAAGACGACACTGTCGGGACTTTGTTGGAAAGCTCTCCCGATGATAAGGGTTCCGATGAACCGACAAACGTGGTGGTGTGGATTTTGAAGAACATGAAGGCGAGAGTGATGGAAGTAATTGAGAGAATGAGAGAGGTGATGAAGCAGTTGTTTGAGAGTGGGAAGGATGATGATGGTGATGGGGAGAAAAGGAGAGAAGGAAGGGATGTGTTTGAGGAGAAGCTTAGAACATCGTTCTTGATATCCATTGTTGTGCTGCTTGTGGTGATGGTGAGTCGAGCTCATACATAAAGTAAGGCTTTCCTCCATGAATTTGACGACATCAAATCTTCTTCTTTTTTTCTTTTTCTTCCAAGTTCTCAGATTGGATATTGGTAATTTGGCAGTCTGAACTTTCTTTTAACTCAAGTTATATGCATATTTTTGTTCATATGTTGCTTTTGTAGGACGTTGTTAGTGCTCTGTTTTTTCAGAAATAGGATTTTCGAGGTACTTATGTGTGATCGCAGATTTCATATAGCTCTCGAAGTACATCATTTGTTGTTATTTTCGAGCTACTATGTATAATGTTTTATTTCACAAATTCCAGGTTTATTCTAAATAAATATTACAAAATACTGAGGATCTTGTTATTTTCGAG ATGGTTATGTCGGTATCGTCGGATAAAGCGGTTTGGGATGCGATTATGAACAATGAAGCTGTGCAACAGCTGAGGAAGTCATTCTACGAAGCAAAAGACGACACTGTCGGGACTTTGTTGGAAAGCTCTCCCGATGATAAGGGTTCCGATGAACCGACAAACGTGGTGGTGTGGATTTTGAAGAACATGAAGGCGAGAGTGATGGAAGTAATTGAGAGAATGAGAGAGGTGATGAAGCAGTTGTTTGAGAGTGGGAAGGATGATGATGGTGATGGGGAGAAAAGGAGAGAAGGAAGGGATGTGTTTGAGGAGAAGCTTAGAACATCGTTCTTGATATCCATTGTTGTGCTGCTTGTGGTGATGGTGAGTCGAGCTCATACATAAAGTAAGGCTTTCCTCCATGAATTTGACGACATCAAATCTTCTTCTTTTTTTCTTTTTCTTCCAAGTTCTCAGATTGGATATTGGTAATTTGGCAGTCTGAACTTTCTTTTAACTCAAGTTATATGCATATTTTTGTTCATATGTTGCTTTTGTAGGACGTTGTTAGTGCTCTGTTTTTTCAGAAATAGGATTTTCGAGGTACTTATGTGTGATCGCAGATTTCATATAGCTCTCGAAGTACATCATTTGTTGTTATTTTCGAGCTACTATGTATAATGTTTTATTTCACAAATTCCAGGTTTATTCTAAATAAATATTACAAAATACTGAGGATCTTGTTATTTTCGAG ATGGTTATGTCGGTATCGTCGGATAAAGCGGTTTGGGATGCGATTATGAACAATGAAGCTGTGCAACAGCTGAGGAAGTCATTCTACGAAGCAAAAGACGACACTGTCGGGACTTTGTTGGAAAGCTCTCCCGATGATAAGGGTTCCGATGAACCGACAAACGTGGTGGTGTGGATTTTGAAGAACATGAAGGCGAGAGTGATGGAAGTAATTGAGAGAATGAGAGAGGTGATGAAGCAGTTGTTTGAGAGTGGGAAGGATGATGATGGTGATGGGGAGAAAAGGAGAGAAGGAAGGGATGTGTTTGAGGAGAAGCTTAGAACATCGTTCTTGATATCCATTGTTGTGCTGCTTGTGGTGATGGTGAGTCGAGCTCATACATAA MVMSVSSDKAVWDAIMNNEAVQQLRKSFYEAKDDTVGTLLESSPDDKGSDEPTNVVVWILKNMKARVMEVIERMREVMKQLFESGKDDDGDGEKRREGRDVFEEKLRTSFLISIVVLLVVMVSRAHT Homology
BLAST of CmoCh02G009800 vs. ExPASy TrEMBL
Match: A0A6J1H1K5 (uncharacterized protein LOC111459296 OS=Cucurbita moschata OX=3662 GN=LOC111459296 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 1.9e-60 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of CmoCh02G009800 vs. ExPASy TrEMBL
Match: A0A6J1K0R8 (uncharacterized protein LOC111490679 OS=Cucurbita maxima OX=3661 GN=LOC111490679 PE=4 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 7.8e-54 Identity = 123/130 (94.62%), Postives = 124/130 (95.38%), Query Frame = 0
BLAST of CmoCh02G009800 vs. ExPASy TrEMBL
Match: A0A5D3C3R4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001130 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 1.2e-33 Identity = 84/126 (66.67%), Postives = 99/126 (78.57%), Query Frame = 0
BLAST of CmoCh02G009800 vs. ExPASy TrEMBL
Match: A0A1S3AUQ1 (uncharacterized protein LOC103483080 OS=Cucumis melo OX=3656 GN=LOC103483080 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 1.2e-33 Identity = 84/126 (66.67%), Postives = 99/126 (78.57%), Query Frame = 0
BLAST of CmoCh02G009800 vs. ExPASy TrEMBL
Match: A0A0A0KK38 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G141170 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 3.4e-33 Identity = 84/126 (66.67%), Postives = 98/126 (77.78%), Query Frame = 0
BLAST of CmoCh02G009800 vs. NCBI nr
Match: XP_022957898.1 (uncharacterized protein LOC111459296 [Cucurbita moschata] >KAG6605633.1 hypothetical protein SDJN03_02950, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035543.1 hypothetical protein SDJN02_02340 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 241.5 bits (615), Expect = 3.9e-60 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of CmoCh02G009800 vs. NCBI nr
Match: XP_023534466.1 (uncharacterized protein LOC111796017 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 232.6 bits (592), Expect = 1.8e-57 Identity = 124/128 (96.88%), Postives = 125/128 (97.66%), Query Frame = 0
BLAST of CmoCh02G009800 vs. NCBI nr
Match: XP_022994991.1 (uncharacterized protein LOC111490679 [Cucurbita maxima]) HSP 1 Score: 219.5 bits (558), Expect = 1.6e-53 Identity = 123/130 (94.62%), Postives = 124/130 (95.38%), Query Frame = 0
BLAST of CmoCh02G009800 vs. NCBI nr
Match: XP_008437734.1 (PREDICTED: uncharacterized protein LOC103483080 [Cucumis melo]) HSP 1 Score: 152.5 bits (384), Expect = 2.4e-33 Identity = 84/126 (66.67%), Postives = 99/126 (78.57%), Query Frame = 0
BLAST of CmoCh02G009800 vs. NCBI nr
Match: KAA0042613.1 (hypothetical protein E6C27_scaffold44G001090 [Cucumis melo var. makuwa] >TYK06015.1 hypothetical protein E5676_scaffold376G001130 [Cucumis melo var. makuwa]) HSP 1 Score: 152.5 bits (384), Expect = 2.4e-33 Identity = 84/126 (66.67%), Postives = 99/126 (78.57%), Query Frame = 0
BLAST of CmoCh02G009800 vs. TAIR 10
Match: AT4G25170.1 (Uncharacterised conserved protein (UCP012943) ) HSP 1 Score: 73.6 bits (179), Expect = 1.3e-13 Identity = 48/128 (37.50%), Postives = 81/128 (63.28%), Query Frame = 0
BLAST of CmoCh02G009800 vs. TAIR 10
Match: AT4G25170.2 (Uncharacterised conserved protein (UCP012943) ) HSP 1 Score: 73.6 bits (179), Expect = 1.3e-13 Identity = 48/128 (37.50%), Postives = 81/128 (63.28%), Query Frame = 0
BLAST of CmoCh02G009800 vs. TAIR 10
Match: AT5G61490.1 (Uncharacterised conserved protein (UCP012943) ) HSP 1 Score: 57.0 bits (136), Expect = 1.3e-08 Identity = 43/124 (34.68%), Postives = 68/124 (54.84%), Query Frame = 0
BLAST of CmoCh02G009800 vs. TAIR 10
Match: AT5G54540.1 (Uncharacterised conserved protein (UCP012943) ) HSP 1 Score: 41.6 bits (96), Expect = 5.6e-04 Identity = 36/136 (26.47%), Postives = 67/136 (49.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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