CmoCh02G009640 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGAGTTCATCTCTCCTAAGAAGGGAAAAAGTGGTTTTTGGATTAAGCATTAAGGAAGCGATTGTGTTCTAAACAGGATGCCTCTGACACATAGGAATATCTTCAAAGGCTGGGGACTGTTTTCAGTTTTTGTGCTTTGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCCTCCCTCTCTCTCTCTCTCTCTTTCTCTTATATAAACAAGTTTATGGCTACCGTACTCCATAGAGCTACGTTTGGTTCTGTCGTTTACTCGTATTTCCTACGTTGTTTCGGAAATCTCGATAATCATCATCATCGTCGTCATCAAAATCATCACAACAGCTTCAATCCTATCCTCTTCAACATGCCAAAGCCCAAACCCCTTTCCTTGCAGGTAATTCCTCTCTTTTTCAGGAGAAAGGTTGATAAAGTTTGTTTTTTTATGCTCAAAAGTGAAAAAAAATCGATCTTTTATGATGGGGATGTGAAAATTTCAAATTTTTACATGTTTCTTGGCTTTTTTGTGTTGAATTTTCATGTGGGTTTGCTTTGAAATTTTGAAAAAACCCAATTTTAAAGGTGTAATTCTTGTTTTTAGTTGTTTTGTTTAAAGAGGAGAGGGAGATGAAGAAAGGGTTATTGGATGTGAGAATCTTGTAGATGTGAAAACCCCTTATGGAAGGGTTCTTTCTCTTTTGTTCTTCTTTTTTCTCAGATCAGCAAAAGGAACAAAGGTATCATAATAATAATAATATCATCACAGAATCTATATCTATCTATTTGCTTATGGTTTGTGCTTTTACAGACTGTTGAGCTAAAAGTCAGGATGTGTTGCAGTGGCTGTGAACGGGTCGTTAAAGATGCGATCTACAAACTTAGAGGTACATAAAAGAACCGAAACAAAAGAAGGGTTGTTTTTAGTTACGAAAAAACATGATTAGGGTTGTCTTGCTTTGTGTAGGAGTTGATTCAGTTGAGGTGAACTTGGAGCTGGAGAAGGTGACGGTGATTGGATATGTCGATCGAAACAAGGTGTTGAAGGCGGTTCGAAGGGCTGGGAAGAGGGCAGAGTTTTGGCCGTACCCAGAGCCACCGTTATACTTCACGTCTGCTGCTGATTACTTTAAAGATACAACTCGTGAGTTCAAAGAGAGCTATAACTATTACAGGCATGGCTATAATATCGGAGAGAAGCACGGAACGATTCCGATATCTCATCGAGGCGACGACAAAGTGAGCAACATGTTCAATGATGACAATGTCAATGCTTGTAATGTCATGTAAATATATGATGATATATGAACGTGAGCCCTAGCTTTTAAGTGTATCTTGGAATTTTAAGGGTTGATGATTTCATATGTTGTTTCTAAGTCATCAGTAAAGTGTGTAAAATGCAGTTTAATTGTTCCTTTCTTTTTCCTTGTATTTGTATGCATGAGTTTATATTATTATAACCACGTTTATGTTACCAAA TAGAGTTCATCTCTCCTAAGAAGGGAAAAAGTGGTTTTTGGATTAAGCATTAAGGAAGCGATTGTGTTCTAAACAGGATGCCTCTGACACATAGGAATATCTTCAAAGGCTGGGGACTGTTTTCAGTTTTTGTGCTTTGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCCTCCCTCTCTCTCTCTCTCTCTTTCTCTTATATAAACAAGTTTATGGCTACCGTACTCCATAGAGCTACGTTTGGTTCTGTCGTTTACTCGTATTTCCTACGTTGTTTCGGAAATCTCGATAATCATCATCATCGTCGTCATCAAAATCATCACAACAGCTTCAATCCTATCCTCTTCAACATGCCAAAGCCCAAACCCCTTTCCTTGCAGACTGTTGAGCTAAAAGTCAGGATGTGTTGCAGTGGCTGTGAACGGGTCGTTAAAGATGCGATCTACAAACTTAGAGGAGTTGATTCAGTTGAGGTGAACTTGGAGCTGGAGAAGGTGACGGTGATTGGATATGTCGATCGAAACAAGGTGTTGAAGGCGGTTCGAAGGGCTGGGAAGAGGGCAGAGTTTTGGCCGTACCCAGAGCCACCGTTATACTTCACGTCTGCTGCTGATTACTTTAAAGATACAACTCGTGAGTTCAAAGAGAGCTATAACTATTACAGGCATGGCTATAATATCGGAGAGAAGCACGGAACGATTCCGATATCTCATCGAGGCGACGACAAAGTGAGCAACATGTTCAATGATGACAATGTCAATGCTTGTAATGTCATGTAAATATATGATGATATATGAACGTGAGCCCTAGCTTTTAAGTGTATCTTGGAATTTTAAGGGTTGATGATTTCATATGTTGTTTCTAAGTCATCAGTAAAGTGTGTAAAATGCAGTTTAATTGTTCCTTTCTTTTTCCTTGTATTTGTATGCATGAGTTTATATTATTATAACCACGTTTATGTTACCAAA ATGGCTACCGTACTCCATAGAGCTACGTTTGGTTCTGTCGTTTACTCGTATTTCCTACGTTGTTTCGGAAATCTCGATAATCATCATCATCGTCGTCATCAAAATCATCACAACAGCTTCAATCCTATCCTCTTCAACATGCCAAAGCCCAAACCCCTTTCCTTGCAGACTGTTGAGCTAAAAGTCAGGATGTGTTGCAGTGGCTGTGAACGGGTCGTTAAAGATGCGATCTACAAACTTAGAGGAGTTGATTCAGTTGAGGTGAACTTGGAGCTGGAGAAGGTGACGGTGATTGGATATGTCGATCGAAACAAGGTGTTGAAGGCGGTTCGAAGGGCTGGGAAGAGGGCAGAGTTTTGGCCGTACCCAGAGCCACCGTTATACTTCACGTCTGCTGCTGATTACTTTAAAGATACAACTCGTGAGTTCAAAGAGAGCTATAACTATTACAGGCATGGCTATAATATCGGAGAGAAGCACGGAACGATTCCGATATCTCATCGAGGCGACGACAAAGTGAGCAACATGTTCAATGATGACAATGTCAATGCTTGTAATGTCATGTAA MATVLHRATFGSVVYSYFLRCFGNLDNHHHRRHQNHHNSFNPILFNMPKPKPLSLQTVELKVRMCCSGCERVVKDAIYKLRGVDSVEVNLELEKVTVIGYVDRNKVLKAVRRAGKRAEFWPYPEPPLYFTSAADYFKDTTREFKESYNYYRHGYNIGEKHGTIPISHRGDDKVSNMFNDDNVNACNVM Homology
BLAST of CmoCh02G009640 vs. ExPASy Swiss-Prot
Match: F4IQG4 (Heavy metal-associated isoprenylated plant protein 30 OS=Arabidopsis thaliana OX=3702 GN=HIPP30 PE=1 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 1.0e-62 Identity = 116/177 (65.54%), Postives = 141/177 (79.66%), Query Frame = 0
BLAST of CmoCh02G009640 vs. ExPASy Swiss-Prot
Match: F4JMB8 (Heavy metal-associated isoprenylated plant protein 44 OS=Arabidopsis thaliana OX=3702 GN=HIPP44 PE=2 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 2.3e-59 Identity = 109/144 (75.69%), Postives = 125/144 (86.81%), Query Frame = 0
BLAST of CmoCh02G009640 vs. ExPASy Swiss-Prot
Match: F4IC29 (Heavy metal-associated isoprenylated plant protein 28 OS=Arabidopsis thaliana OX=3702 GN=HIPP28 PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 6.5e-22 Identity = 63/157 (40.13%), Postives = 89/157 (56.69%), Query Frame = 0
BLAST of CmoCh02G009640 vs. ExPASy Swiss-Prot
Match: B3H6D0 (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 3.6e-20 Identity = 58/155 (37.42%), Postives = 89/155 (57.42%), Query Frame = 0
BLAST of CmoCh02G009640 vs. ExPASy Swiss-Prot
Match: Q9LF57 (Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana OX=3702 GN=HIPP21 PE=1 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.0e-19 Identity = 57/153 (37.25%), Postives = 90/153 (58.82%), Query Frame = 0
BLAST of CmoCh02G009640 vs. ExPASy TrEMBL
Match: A0A6J1H392 (heavy metal-associated isoprenylated plant protein 30-like OS=Cucurbita moschata OX=3662 GN=LOC111459606 PE=4 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 5.8e-106 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
BLAST of CmoCh02G009640 vs. ExPASy TrEMBL
Match: A0A6J1K4F0 (heavy metal-associated isoprenylated plant protein 30-like OS=Cucurbita maxima OX=3661 GN=LOC111491091 PE=4 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 1.9e-101 Identity = 184/189 (97.35%), Postives = 185/189 (97.88%), Query Frame = 0
BLAST of CmoCh02G009640 vs. ExPASy TrEMBL
Match: A0A6J1E499 (heavy metal-associated isoprenylated plant protein 30-like OS=Momordica charantia OX=3673 GN=LOC111025935 PE=4 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 3.3e-93 Identity = 170/190 (89.47%), Postives = 173/190 (91.05%), Query Frame = 0
BLAST of CmoCh02G009640 vs. ExPASy TrEMBL
Match: A0A1S3AUP4 (heavy metal-associated isoprenylated plant protein 21-like OS=Cucumis melo OX=3656 GN=LOC103482882 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 6.9e-91 Identity = 166/193 (86.01%), Postives = 176/193 (91.19%), Query Frame = 0
BLAST of CmoCh02G009640 vs. ExPASy TrEMBL
Match: A0A0A0KJS4 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G146830 PE=4 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 9.0e-91 Identity = 166/193 (86.01%), Postives = 175/193 (90.67%), Query Frame = 0
BLAST of CmoCh02G009640 vs. NCBI nr
Match: XP_022958360.1 (heavy metal-associated isoprenylated plant protein 30-like [Cucurbita moschata] >XP_022958361.1 heavy metal-associated isoprenylated plant protein 30-like [Cucurbita moschata]) HSP 1 Score: 393.3 bits (1009), Expect = 1.2e-105 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
BLAST of CmoCh02G009640 vs. NCBI nr
Match: KAG6605620.1 (Heavy metal-associated isoprenylated plant protein 30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035531.1 Heavy metal-associated isoprenylated plant protein 30, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 382.1 bits (980), Expect = 2.8e-102 Identity = 185/189 (97.88%), Postives = 186/189 (98.41%), Query Frame = 0
BLAST of CmoCh02G009640 vs. NCBI nr
Match: XP_022995604.1 (heavy metal-associated isoprenylated plant protein 30-like [Cucurbita maxima] >XP_022995605.1 heavy metal-associated isoprenylated plant protein 30-like [Cucurbita maxima]) HSP 1 Score: 378.3 bits (970), Expect = 4.0e-101 Identity = 184/189 (97.35%), Postives = 185/189 (97.88%), Query Frame = 0
BLAST of CmoCh02G009640 vs. NCBI nr
Match: XP_023534495.1 (heavy metal-associated isoprenylated plant protein 30-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 374.0 bits (959), Expect = 7.5e-100 Identity = 182/189 (96.30%), Postives = 182/189 (96.30%), Query Frame = 0
BLAST of CmoCh02G009640 vs. NCBI nr
Match: XP_022159551.1 (heavy metal-associated isoprenylated plant protein 30-like [Momordica charantia]) HSP 1 Score: 350.9 bits (899), Expect = 6.8e-93 Identity = 170/190 (89.47%), Postives = 173/190 (91.05%), Query Frame = 0
BLAST of CmoCh02G009640 vs. TAIR 10
Match: AT2G18196.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 241.1 bits (614), Expect = 7.1e-64 Identity = 116/177 (65.54%), Postives = 141/177 (79.66%), Query Frame = 0
BLAST of CmoCh02G009640 vs. TAIR 10
Match: AT4G10465.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 229.9 bits (585), Expect = 1.6e-60 Identity = 109/144 (75.69%), Postives = 125/144 (86.81%), Query Frame = 0
BLAST of CmoCh02G009640 vs. TAIR 10
Match: AT1G06330.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 105.5 bits (262), Expect = 4.6e-23 Identity = 63/157 (40.13%), Postives = 89/157 (56.69%), Query Frame = 0
BLAST of CmoCh02G009640 vs. TAIR 10
Match: AT3G56891.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 99.8 bits (247), Expect = 2.5e-21 Identity = 58/155 (37.42%), Postives = 89/155 (57.42%), Query Frame = 0
BLAST of CmoCh02G009640 vs. TAIR 10
Match: AT5G17450.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 98.2 bits (243), Expect = 7.4e-21 Identity = 57/153 (37.25%), Postives = 90/153 (58.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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