CmoCh02G006810 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G006810
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transmembrane protein 56-B-like isoform X1
Location	Cmo_Chr02: 4324554 .. 4332475 (+)
RNA-Seq Expression	CmoCh02G006810
Synteny	CmoCh02G006810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAATCTTGTTTGTGGAGTGATTCGAATCTCAATCAAGCGTTCTTCTTGCCTTGAGATATTCGATCAACAAGGTAATCCGAATCTTATTCCCCTTGTATTGATTCCTTATCTTATCAGTTTTTCCTTGTATAATAGTCAAACAAATGTATACGAGCTCATTCATCCATGGACTTCTTAGACAAAACCATCACTTTCGCCTTACTTCACATCAAATCTTTTCATTTGTGTGAGAGTTGTGACGTGTTTGCTGTAATATTACTCTAATAAAAATATTCAATTTGTTACCGAAGAATAAAATATTAATGTCAACTTGAATATTATAACCCAAATAGAACTCAAATTAGGTTATAATATAAAACACAAAAATGTTGGAATTTGTTATATTTTCTAATTTAAATCAATGTATTAGACTTGATGTAACGACCCTAAATTTCTATATACTCAGAGTCACTACTAACGTGTCGTGCTCATGTCTTATGCATAAATATAAGACATCATCTATAATATAAATGTCGAGAACATTTAAAACATCCTATCCTTTCAAAAAAATACTGGCATGGTCTTACAGTCATGGTCCTACCTATTTAAAGTTTGCGAATAGGTCGAGGGTGTTGTGCTCTGATGCCTCTAATCCGATGCCTTTTTTAAAAAATATTTACGTGTTTTATTTGAAAAATAAAAAATCACGTCTATTTTTATATTTCTTTTGAAAAATGAAAAAAAAAACCGAAATTCTTTTTGATCACTTGAAACCTAGATCCGAGCCAACGAGAGACAATAACTCCTTTCGAACATAAAGGTTGGCCTTATCTCATCCCAATATCTCGTACACGGAACGAGTAATTGACCCTCCTAGGAGTTTTATAGGACTATAAAATAAATATTAAATATTATAAAGTTAATATTTAATTTCGAAAAACGGAATTAATAATTTAATATTCACTTCTTTATTAGTTTAAAAGTTAAAATGGATTAAATGATATAGTTTAGCACTGAAAAATTATTAAAATTATATTAATATAGACAAATATAAAAACCATTTATAAATTAAATTTGTAAAATTTTAATTTTATATCAAATAAATATAATTTTATTCTGGAATAAGCATATTTTCAATTTTATTTTTATAGGTGTTACCATTAAAAAAATTAATAAATAATTTTTTTTATACATTATTTAAACGTTATTAAATACTCAATTAAGATCTATTCAATATTTTTTAAAATCAAAATATTTACGCGACATAAACTTTTGTGACATTCATACTAGAAAATTGTAAATTTTTTTTTGGTTAAATTATGAAAGATACTATTAAATTCTGTCTCGTTTTAAAATTACATTTATTCTTTAAAAAGTGGTAATATTATTTATATTTCTTTAATAAATATTTTAAAATTACTATTCCAATACTAATTAATTAGAATATTCATAAAAATTAAATTTAAAAGAATATATATATATATATATATATATATATATATATTATTTTTTATTTTTTTTTGGTGAGAAGAAAGTAATAATTTACTAAAACGTAAATGTAACCATTTAAGGCCTGTTAGGCGTCCAAACTCACACAAGAACGTCACTCTGTCGCAATGCCGCCGTGTATCTCCGATTTCTTGTCGGTCTTCCAAAATTCCGATTTCCACTCGAGAGATTCTCGATCAGTCCAGTCAAATCTCAAAGCTCTTCTTCGTTAACCGTCCATTTGTTGTTTTGTACGATCATAATTTATCGTTTTCTCGTCTTTACTTCACTTCGACTTCACGTTTTTCGCTTTTCACCGGCTGCCGCGAGCTTCCGGCAGCGTCTGTATATGAACTTGGACGACGCTTTTTCCTACTACTTCCGGCTGCTGTTGCTACTTTTTTCTCGCATAATATCATCCAGTGTATCCAGGCAATGTACTTTGATGGTGATGGCCCGCTAGTGCTGGTGGCTTTCTAAGCCTACGCTGTCTTTTCCGAATAAGTATGTCCATATCCATCATCTGCCGGAAAAAATAATTTTGATACCTACTTGATGGTGTTAACTCGTTCTGCACGTGAAGTTAGGGCTTTATACTTGTTCGCTTTTACTCCATTGAGCGGACTATTCAATACTGATTCGGTTATCTTTTGTGCAGTTTGCAGCAATTGTGCATCTGCCTCTCTCTCTTGCGTACATGACTTTCTCAGTCACCGACGCTTCCGATCCGAGTAAGGGACTTCAATGGATGGCTTCGGTCTTTTCTGGCATTGTTTTCTGCAAGATTGTAAGTGTGCATATTTGAACGAGTTGCGAATCATATTGTTATTGTTTGTTTAAAGTAGAGCAACCGACTAGGCTATCCATGATTTCCTCTTCTCTCTCCGAAAAAAAAAAATAGGCAATCCATTACATCTAGTTAGATTTCACTGTCGAGGCTTCTTGCTAGACTGAGGAACAGTTTCCTTGACCTAATTTCCACTGGTTCTTTTAGAAGCTGTTAGTTGATTCAATTACCAATCTCCATTGATTTGTTGTCGTCTCGTCACTACACACGTATATTGATAGAGGTTTATTAGTGGAAGCGTCTTGAGTGCATATGTGAATAAAGACGTGCTGCTCTCGTATGCACGTCTGTTTGTTAATTTTGAGAATTGGAAGAAAAATGTTTTCCTCTAGTTCAATTGTGGTGCATCCAGCTTTCTTTGATATGCGTGAAGTTGTATAAATGTTCTTAAACGTTTACTTCTCGTTTACCAGTGTCAAATTTCAAATATTAATGAAATTACTCTTTTTATTACCTATGTTCGTTAGGTGCTTATGCAGTATTAAAAATAATAAAGAACAGATGATTTTTTTTTTTTTTTGTCTTTTTCTCATTTAAATAGTTTTGAAGCAAAACTTCAATTCTTTTATTGGATCGAAAACTAGATAGGAAGAAACAAGAGTGATTGCAACAGAAAGGCTTAAACGAGAGTGGTTGTCAAACATATTTTTTTTGTATTATTTCTTTTCGTTCTTCAGATTAAACACGAACTAAATAAGAAATGATTATCAAGCGAGATGGTAGAACTAGGAAGTGAAAGCATTACAAAATAGACCCTTAATTGCAGTATTTTTGTTGTTGTGCGATTGCACATGATTGAAAAGAAGAACGCATGTTCTTGAACTTCTCTGTTACTGGACAATTTATGCTTTTTTCTAGTCAAGCTTAAATTGGTTTCTTTTTTGAAGGTTTACACGTTAACAGGCATCCTTAGCCTCCAAAGTTTCAAAGCATATGGCAAGTTAAGCGATTTTGGGAAGGTTGAATGGAACAATAGGTAAAATTCTCGTGATTTTTTATTTCATTTAGTAATTAGCTTATTTCTTAGTTGTACATTTGCTATGCGAATGTAAAATGATGAATTGTTATTCTATTATAGGGGCTTTTCAACTTTCCACGCCCTAGTTGCAGCATCTTCTTCTCTTTATCTTGTACTGTTGTCAAGTACTTTCAATCCAGGTTCCAGTAATGAACTTCTTATAAGAAGAACGTCCTCTTTATCTGATATGACATTGGGGGTAAGTTGATGAGCAGAAAGGTCAAGTCTTCTCCTTGTGTAATATTTGGTTCTAATTTTTTCTCAACTTGCTTTCTTTTGTTTGCTGTCATTACAATAATCTTGCCCGTAACCTATTTTCTGAGTTGGCTCTGCTACATAATGTTATGATTATTTTGTGTAAAGTTCATGTCTTATATGTATATGTCTATTTGTATATATTAGTATAATTTTGTTGTTACAAACTATTTGCCTATTATATTATTCAGTTTGCTCGTGACCACTAAATGCATGATGCAAGGGTTATGTGTATGAGTTGAACTTATTTGATATAGAAGTTTATGGTTGGACACTGTTTCAATGTGAGTATTGTTCACAACTAGTGCCTCTTGCATTAATTTTTATTGTCATTTTGTTCTTTGATTGAAGAGTATATTGTGTATACAACACATATTGTACTCAAGACATGTACACAAGGGAGTTGCAATTTAGAGTTTTAGAAAGCTGGACAAGAAATAGCATGAGCTTCTACATGATCAAGCACTTTACCCTGCCTTAATGTAATATAATATAAGCATCGTTGCATTTTATTAATGTCCTATATTGATTTAGTATAATTAAAAAACTGGAAAATTCAGAAAACATTAATTTTCTTGTAGACATGAAATTTCAAATGCTCTTGCACTCAACTGAGTGATGGGCTGTAATGACATAAATGTCATTTGGGCCCTTTACCTTCTGACTGTTTGTCATTTCTGGTCGTGTATTCAATTTTTCTTCTCTTTTTGTTTGTTTTTTTTATGTGTTCTTAGATCTCTTCCACGAGGTGCTTAGTGGCTGCAAGTGATTAGTTACATGTGAAGTAATTTTTTAACTTGTGTAACGTTTTACACTTTCTCCATTAAAAAAGAGCAGTTAGATTCTTTCTCATTTTTTTTTTTTTCCTTTTGCTTTCTACAGTTCTCTATTGGCTATTTTCTATCAGATTTAGCAATGGTCCTTTGGTTCTTCCCGGCTTTAGGTGGTCTAGAGTATGTGAGTATGGAGAAAGGTTATTTTTTTTTACCACATAATTGCAATACATTACATTCATTTGATATCATATTTAGTTGTGCTTTATGTTTCACTTTTTAATAAATCATTTTATAGTGGAAATACAGAATGAAGCTGAATAACTGCTTTTGTTTTTCATTTTTGTATGGTAGAAATAAAACTCATACATCTCCCCATATAAGAACTATAATAAGATTTGTAGAAGAGACAAAAAATTGTTTTCTCAGTATCAGTTTTAATTCTCATTTTTTAAAAATTTATAATGTTACTGATGAAATGCAACATATAAGTAGAGAGTCGAGACTAAATTAGTGCATATATTGTCGAGGGAGATTGATTTGAAAAAAAAGTAGTAGAAAAGTTGATTGTATGCAATATTTGTTTATATATCTAGATACCCAATTACCCAGATGGCGGGTAGAAAAGTTTGTTGGGCGGTGACTTGAGGGAGCAACGTGAAATACACTACATATTGTGGGTATGTAGAGTGATTAATTTATGAGTGTGTTTAAGTGTAGCAAGATGCAAGAGTGGATTGGTCAGAAATTGATGTATCGTAAGAAAGGAAGTATTGTTTGTCCATATGGTGAATTAGTGCAACTAGAGGGGAGCATGAGAGCATACCCATGGATTGTGAAAAACTACTATGAAAGAGAATGTGATAATTTATGGATTATTTTTTACTTGGTAAGAAAGTACTGGAAAATAGAACTATCATGGGTTGACCTAGTGGTCATATGAGCTTCGGGGAAATAAGAAGGAATGAGTTCATGGTGGCCACTTAGGATTTAATATATAGGCTGGCCAGTACAGTAGACTTGAATAAAGAAAACTGAACTTTGAAGACAGTAGACTTGTGTGCTTAAATACTGAGTGAAAGCTGGTAACTGACTTTCCTAATTTTAATGACTTCAATAGGTTCTGCATCATGGACTGTCACTGTTCTCAATCATTCAATCCCTCCTAAGTGGTCAAGGACAGGTTTACATACTAATGGTTCTTTTTACAGAGATCACCACTCCGTTCGTAAATCTTAGATGGTAAAGTTCATCAATTATGATTTTATGTTTCGTGTTTCTTAGGGCTGGTTTGGGAGTGATGTCAAGATTACCAAAATCACTTTTTTCATGCTCTTTTAAAATATTTTTGACATGGCAAAAATGGTTTTGTCCATTTTAAAGTCACTTTCAAACATGCCCAAAATATAGAATTCATTACTCTGTTTTCTAGATCAGAAAAAGAACGTATTTAGTTTTGAACTATTGGCTCGTTGCTTTCATTGACTTCATCAGGTACTTGGACAATGCTGGCCAGAAGAACTCAAATTTCTACGTCATTAATGGAATTGCGCTGTTTTTTGGGTGGTTGGTAACGTCCATAACTTGAGATCTGGTTTCATTTTAGTGTATAACAAGATTCCCTGTTCAATAGAAATTAATGTATTTGAGTGCGTTCATGCACAATTGAATTAAATAACATCTTTAAAAGTTCATAAATGATTCATTAAAAGTGATTTTCATATAATCATTTTAGTTTTAGGTTTTTACTTTTAAATGCAAAATTGTTGAATTATTTTTGCATGTTTGAGATTGATTTTTAGCTTGTAAAAATGATTTCATCCATTTCAAAACCACTTCCAAACATACCTGTGAGTTCGTTGGCATCTTAAATTTCAGTCTATTTTTTGTTCAAGACTGATAAGTTTTGTTTCTTCAGGTTGCCAGGATTGTCTTATTTATATATTTTTTCGGCCACATGTTTAAACATTTTGATGAGGTGAGTAATTAACATCTCTCGTTGCAAACTGAGCCTTGAATAATTTGCTTATGGAGAATTATATTCTTAGTGAACTGTTCAAGTTCATTTTCCTTGAAGTAAGATGCTAGAAATGATAGATTTGCAAGTCTAGTTCCATGCTTGAATTATTCGATCCATGATAGAGCTGTATGTTCATACTGACACGAGGCACTTCATTCTTACAATGAAATATTTCTTAGCTGTTTGTTATCGAAAGGAAAAAAAGTAAAATCTGTTGCAAGTTGATGCTGACTTGGGGGTGTCTATAATCTGTGTGAGACTATGATATGGAGAGAAAAATAGAAACCAAAAAAAAAAAAAAAAAAAAGTAAAGAAATGATTTATTGCTGAAATGCAATGCCACTAGCCTTTCTGCTAGAGCCTCCTAGTTTGAAAACTTTTTAGGTCCAATAACCTTTAAACTACTTTCAAATGGTTCCTTTTAAACATGGTGGATGAAATTTCCCTAAACTTTTCTTTCATTGCTTTGATTGCTGACACTTTCGCATCAGATAATTGGTGGTTTGAGTTGGATTCCTGATCATAATTTCTTATTATACTTGGTTGAAGTGGGTAGCTTGGAAAGGTGGTTCGTATTGGATTTCTAAGAAGAAAAAGTTGATACTTTTATAAGGGGTCGGTAGGTGGCACATATTGGCTAGCCCAGATAACCCCTCCGTCATCCGAGTGTGGGGTGGATTGGATGAATTTGGAGTGATTTTATTTCATTTTTTAAAAAACCAGTGTTTGATTAGATAATTAAACAAATATCTAAAAGTTGTAAAAAGACTAAATAGCACTTGGGAGAGTTTTAAATTACTTTTGGTCTGAAAATAGTGTTTCATGTGGGTGGATGATGAAAGTACCACATCGACTAATTTAGGGAATGATCATGGGTTTGTAATCAAATAATACTCTCTCCATTCCATAGGTACGAGGCATTTTGGGAAAGCCCAAAGCAAAGCCATAAGAGCTTATACTCAAAGTGGACAATATCATATCATTGTGGAGAGTCTTGTTCATCTAACATTTCATACTCAATAGCTTAGAAGCCGGTCAGTGGTTGAAGAAGTTTCTGTTCCACATGTTTCAGGTAAAGAGTGTGTATTCTTTGGGCTTCTACACCTTGCTGGCGGTGCCTCCTATGCTGGCTATTATGAACATATTCTGGTTTTGGAAGATCGCCAGAGGAATGATTAAAACTCTCAAAAAAGCAAGGCACAGCAAATGACAGGTCCATTTTGCTTGATTCCTTCCTTATTTGTCTTTTAATACGCTATTTAGTTGCCCACAATGTAAAATGTAAAAAATGTAGTTAATTTGGTCGTAGAACTCTGCTTCTGCACTGTAAAACATAAGTAATGGACATAGATACCTAAAATTATGTTTATTAATACAGACTAAGCATCATACTTGTTATTAATACGAACTTCGAAATGTTCTATTTGGATCTTCGGATCTGCAGCTAGTGTATTACTTCAGATTTAAGTGAGCGGTATATGAAGATCTATGTCTAGGACTCTCGGTTAAAAGGTTAAATGTCAAATCTCGGGTTCTG

mRNA sequence

ATGATCAATCTTGTTTGTGGAGTGATTCGAATCTCAATCAAGCGTTCTTCTTGCCTTGAGATATTCGATCAACAAGGTAATCCGAATCTTATTCCCCTTGTATTGATTCCTTATCTTATCAGTTTTTCCTTGCGTCCAAACTCACACAAGAACGTCACTCTGTCGCAATGCCGCCGTGTATCTCCGATTTCTTGTCGGTCTTCCAAAATTCCGATTTCCACTCGAGAGATTCTCGATCAGTCCAGTCAAATCTCAAAGCTCTTCTTCGTTAACCGTCCATTTGTTGTTTTGTACGATCATAATTTATCGTTTTCTCGTCTTTACTTCACTTCGACTTCACGTTTTTCGCTTTTCACCGGCTGCCGCGAGCTTCCGGCAGCGTCTGTATATGAACTTGGACGACGCTTTTTCCTACTACTTCCGGCTGCTGTTGCTACTTTTTTCTCGCATAATATCATCCAGTGTATCCAGGCAATGTACTTTGATGGTGATGGCCCGCTAGTGCTGTTTGCAGCAATTGTGCATCTGCCTCTCTCTCTTGCGTACATGACTTTCTCAGTCACCGACGCTTCCGATCCGAGTAAGGGACTTCAATGGATGGCTTCGGTCTTTTCTGGCATTGTTTTCTGCAAGATTGTTTACACGTTAACAGGCATCCTTAGCCTCCAAAGTTTCAAAGCATATGGCAAGTTAAGCGATTTTGGGAAGGTTGAATGGAACAATAGGGGCTTTTCAACTTTCCACGCCCTAGTTGCAGCATCTTCTTCTCTTTATCTTGTACTGTTGTCAAGTACTTTCAATCCAGGTTCCAGTAATGAACTTCTTATAAGAAGAACGTCCTCTTTATCTGATATGACATTGGGGTTCTCTATTGGCTATTTTCTATCAGATTTAGCAATGGTCCTTTGGTTCTTCCCGGCTTTAGGTGGTCTAGAGTATGTTCTGCATCATGGACTGTCACTGTTCTCAATCATTCAATCCCTCCTAAGTGGTCAAGGACAGGTTTACATACTAATGGTTCTTTTTACAGAGATCACCACTCCGTTCGTAAATCTTAGATGGTACTTGGACAATGCTGGCCAGAAGAACTCAAATTTCTACGTCATTAATGGAATTGCGCTGTTTTTTGGGTGGTTGGTTGCCAGGATTGTCTTATTTATATATTTTTTCGGCCACATGTTTAAACATTTTGATGAGGTAAAGAGTGTGTATTCTTTGGGCTTCTACACCTTGCTGGCGGTGCCTCCTATGCTGGCTATTATGAACATATTCTGGTTTTGGAAGATCGCCAGAGGAATGATTAAAACTCTCAAAAAAGCAAGGCACAGCAAATGACAGGTCCATTTTGCTTGATTCCTTCCTTATTTGTCTTTTAATACGCTATTTAGTTGCCCACAATGTAAAATGTAAAAAATGTAGTTAATTTGGTCGTAGAACTCTGCTTCTGCACTGTAAAACATAAGTAATGGACATAGATACCTAAAATTATGTTTATTAATACAGACTAAGCATCATACTTGTTATTAATACGAACTTCGAAATGTTCTATTTGGATCTTCGGATCTGCAGCTAGTGTATTACTTCAGATTTAAGTGAGCGGTATATGAAGATCTATGTCTAGGACTCTCGGTTAAAAGGTTAAATGTCAAATCTCGGGTTCTG

Coding sequence (CDS)

ATGATCAATCTTGTTTGTGGAGTGATTCGAATCTCAATCAAGCGTTCTTCTTGCCTTGAGATATTCGATCAACAAGGTAATCCGAATCTTATTCCCCTTGTATTGATTCCTTATCTTATCAGTTTTTCCTTGCGTCCAAACTCACACAAGAACGTCACTCTGTCGCAATGCCGCCGTGTATCTCCGATTTCTTGTCGGTCTTCCAAAATTCCGATTTCCACTCGAGAGATTCTCGATCAGTCCAGTCAAATCTCAAAGCTCTTCTTCGTTAACCGTCCATTTGTTGTTTTGTACGATCATAATTTATCGTTTTCTCGTCTTTACTTCACTTCGACTTCACGTTTTTCGCTTTTCACCGGCTGCCGCGAGCTTCCGGCAGCGTCTGTATATGAACTTGGACGACGCTTTTTCCTACTACTTCCGGCTGCTGTTGCTACTTTTTTCTCGCATAATATCATCCAGTGTATCCAGGCAATGTACTTTGATGGTGATGGCCCGCTAGTGCTGTTTGCAGCAATTGTGCATCTGCCTCTCTCTCTTGCGTACATGACTTTCTCAGTCACCGACGCTTCCGATCCGAGTAAGGGACTTCAATGGATGGCTTCGGTCTTTTCTGGCATTGTTTTCTGCAAGATTGTTTACACGTTAACAGGCATCCTTAGCCTCCAAAGTTTCAAAGCATATGGCAAGTTAAGCGATTTTGGGAAGGTTGAATGGAACAATAGGGGCTTTTCAACTTTCCACGCCCTAGTTGCAGCATCTTCTTCTCTTTATCTTGTACTGTTGTCAAGTACTTTCAATCCAGGTTCCAGTAATGAACTTCTTATAAGAAGAACGTCCTCTTTATCTGATATGACATTGGGGTTCTCTATTGGCTATTTTCTATCAGATTTAGCAATGGTCCTTTGGTTCTTCCCGGCTTTAGGTGGTCTAGAGTATGTTCTGCATCATGGACTGTCACTGTTCTCAATCATTCAATCCCTCCTAAGTGGTCAAGGACAGGTTTACATACTAATGGTTCTTTTTACAGAGATCACCACTCCGTTCGTAAATCTTAGATGGTACTTGGACAATGCTGGCCAGAAGAACTCAAATTTCTACGTCATTAATGGAATTGCGCTGTTTTTTGGGTGGTTGGTTGCCAGGATTGTCTTATTTATATATTTTTTCGGCCACATGTTTAAACATTTTGATGAGGTAAAGAGTGTGTATTCTTTGGGCTTCTACACCTTGCTGGCGGTGCCTCCTATGCTGGCTATTATGAACATATTCTGGTTTTGGAAGATCGCCAGAGGAATGATTAAAACTCTCAAAAAAGCAAGGCACAGCAAATGA

Protein sequence

MINLVCGVIRISIKRSSCLEIFDQQGNPNLIPLVLIPYLISFSLRPNSHKNVTLSQCRRVSPISCRSSKIPISTREILDQSSQISKLFFVNRPFVVLYDHNLSFSRLYFTSTSRFSLFTGCRELPAASVYELGRRFFLLLPAAVATFFSHNIIQCIQAMYFDGDGPLVLFAAIVHLPLSLAYMTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNRGFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAGQKNSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFYTLLAVPPMLAIMNIFWFWKIARGMIKTLKKARHSK

Homology

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BLAST of CmoCh02G006810 vs. ExPASy Swiss-Prot
Match: Q6PGS5 (TLC domain-containing protein 4-B OS=Xenopus laevis OX=8355 GN=tlcd4-b PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.3e-17
Identity = 70/242 (28.93%), Postives = 119/242 (49.17%), Query Frame = 0


Query: 202 SVFSGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNRGFSTFHALVAASSSLYLVL 261
           SV S  VF  + +  +  LS +    + KLS   K+EWN+R  S+FHALV     LY+++
Sbjct: 12  SVTSLAVFQFLFHVGSSWLSTRLTGGFHKLSARQKIEWNSRTVSSFHALVVGCFCLYILV 71

Query: 262 LSSTFN--PGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVLWFFPALGGLEYVLHHGL 321
                N  P   +  +++       + +  + GY +SDL ++++++  +G   +V HH  
Sbjct: 72  YDDAVNADPVWGDPFMVK-------LNVAVTSGYLISDLLLIIYYWKEIGDKYFVTHHLA 131

Query: 322 SLFSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAG-QKNSNFYVINGIALFFGW 381
           +L++    L  G    +    L  E +TPFVN RW+ +  G  K S   ++NG+ +   +
Sbjct: 132 ALYACYYVLGEGMLPYFGNFRLIAEFSTPFVNQRWFFEVLGYSKYSLPNMVNGVLMTISF 191

Query: 382 LVARIVLFIYFFGHMFKHFDEVKSVYSLGFYTLLA---VPPMLAIMNIFWFWKIARGMIK 438
            + RI +   ++G +F  F   ++ + LG     A       L IMN+ W  KIA+G  K
Sbjct: 192 FIVRIAVIPIYYGRVFSTFG-TEAFHRLGLGAQCAWIISSVSLDIMNVMWMIKIAKGCYK 245

[Close]

BLAST of CmoCh02G006810 vs. ExPASy Swiss-Prot
Match: Q96MV1 (TLC domain-containing protein 4 OS=Homo sapiens OX=9606 GN=TLCD4 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.3e-16
Identity = 70/250 (28.00%), Postives = 114/250 (45.60%), Query Frame = 0


Query: 205 SGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNRGFSTFHALVAASSSLYLVLLSS 264
           S   F  + Y ++   S +    +  LS   K+EWN+R  ST H+LV     LY+ L   
Sbjct: 15  SFFTFQLLFYFVSYWFSAKVSPGFNSLSFKKKIEWNSRVVSTCHSLVVGIFGLYIFLFDE 74

Query: 265 TFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSI 324
                      +    SL+++ +  + GY +SDL++++ ++  +G   +++HH  SL++ 
Sbjct: 75  ATKADP-----LWGGPSLANVNIAIASGYLISDLSIIILYWKVIGDKFFIMHHCASLYAY 134

Query: 325 IQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAG-QKNSNFYVINGIALFFGWLVARI 384
              L +G         L  E+++PFVN RW+ +     K S   VINGI +        +
Sbjct: 135 YLVLKNGVLAYIGNFRLLAELSSPFVNQRWFFEALKYPKFSKAIVINGILM-------TV 194

Query: 385 VLFIYFFGHMFKHFDEVKSVYSLGFYTLLAVPPMLA---------IMNIFWFWKIARGMI 444
           V FI     M  H+  + SVY    Y  L V   L+         +MN+ W  KI++G I
Sbjct: 195 VFFIVRIASMLPHYGFMYSVYGTEPYIRLGVLIQLSWVISCVVLDVMNVMWMIKISKGCI 252

[Close]

BLAST of CmoCh02G006810 vs. ExPASy Swiss-Prot
Match: Q6P4N1 (TLC domain-containing protein 4 OS=Xenopus tropicalis OX=8364 GN=tlcd4 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 5.3e-14
Identity = 68/239 (28.45%), Postives = 112/239 (46.86%), Query Frame = 0


Query: 216 LTGILSLQSFKAYG---KLSDFGK-VEWNNRGFSTFHALVAASSSLYLVLLSSTFN--PG 275
           L  I+S ++F  Y    +   FGK  EW++R  ST HALV  S  LY++      N  P 
Sbjct: 22  LFSIISPRTFTKYSSTYRQLSFGKQCEWDSRCVSTTHALVVGSGCLYILAYDEAVNADPI 81

Query: 276 SSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSIIQSLL 335
             +   ++       M +  + GY + DL ++  F+  +     V HH    +S    L 
Sbjct: 82  WGDPFWVK-------MNVAITCGYLVHDLLLLARFWKVMRDPYMVCHHLAVFYSYGYVLN 141

Query: 336 SGQGQVYILMVLFTEITTPFVNLRWYLDNAGQKNSNFYV-INGIALFFGWLVARIVLFIY 395
            G    +    L +E++TPFVN RW+ D  G+  S++ V +NG+A+   + + RI +   
Sbjct: 142 RGVLPYFANFRLISELSTPFVNQRWFFDVIGKPRSSWPVLLNGLAMALVFFIVRIAVIPS 201

Query: 396 FFGHMFKHFDEVKSVYSLGFYTLLAVPPMLA---------IMNIFWFWKIARGMIKTLK 439
           ++  +F       + +    Y  L + P +A         I+N+FW +KIARG  K +K
Sbjct: 202 YYSQVF-------ATFGTEGYIRLGIGPQVAWIVSCVVLDILNVFWMYKIARGFYKVVK 246

[Close]

BLAST of CmoCh02G006810 vs. ExPASy Swiss-Prot
Match: Q6GLX2 (TLC domain-containing protein 4-A OS=Xenopus laevis OX=8355 GN=tlcd4-a PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.5e-13
Identity = 62/223 (27.80%), Postives = 106/223 (47.53%), Query Frame = 0


Query: 228 YGKLSDFGKVEWNNRGFSTFHALVAASSSLYLVLLSSTFN--PGSSNELLIRRTSSLSDM 287
           Y +LS   + EW++R  ST HAL+  S+ LY++      N  P   +   ++       M
Sbjct: 37  YRQLSFGKQCEWDSRFVSTNHALIVGSACLYILAYDDAVNADPIWGDPFWVK-------M 96

Query: 288 TLGFSIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEI 347
            +  + GY + DL ++  F+  +     V HH    +S    L  G    +    L +E+
Sbjct: 97  NVAITCGYLVQDLLLLARFWKVMRDPYMVCHHLAVFYSYGYVLNRGVLPYFANFRLISEL 156

Query: 348 TTPFVNLRWYLDNAGQKNSNFYV-INGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVY 407
           +TPFVN RW+ D  G+  S++ V +NG+A+   + + RI +   ++  +F       + +
Sbjct: 157 STPFVNQRWFFDVIGKPRSSWPVLLNGLAMALVFFIVRIAVIPSYYSQVF-------ATF 216

Query: 408 SLGFYTLLAVPPMLA---------IMNIFWFWKIARGMIKTLK 439
               Y  L + P +A         I+N+FW +KIARG  K +K
Sbjct: 217 GTEGYIRLGIGPQVAWIVSCVVLDILNVFWMYKIARGFYKVVK 245

[Close]

BLAST of CmoCh02G006810 vs. ExPASy Swiss-Prot
Match: Q8CGF5 (TLC domain-containing protein 4 OS=Mus musculus OX=10090 GN=Tlcd4 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 6.5e-12
Identity = 70/252 (27.78%), Postives = 116/252 (46.03%), Query Frame = 0


Query: 205 SGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNRGFSTFHALVAASSSLYLVLLSS 264
           S +VF  + + ++   S +    Y  LS   K+EWN+R  ST H+L+     LYL     
Sbjct: 28  SFVVFQILFHFVSYWFSARVSSGYNSLSIDKKIEWNSRVVSTCHSLLVGIFGLYLFF--- 87

Query: 265 TFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSI 324
            F+  +  + L    + + ++ +  + GY +SDL ++L+ +  +G   +++HH   L + 
Sbjct: 88  -FDEATITDPLWGDPTYV-NINIATASGYLISDLLIILFNWKVIGDKFFIIHHCAGLTAY 147

Query: 325 IQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAG-QKNSNFYVINGIALFFGWLVARI 384
              L +G         L  E+++PFVN RW+ +     K S   VINGI +   + + RI
Sbjct: 148 YFVLTTGALAYIANFRLLAELSSPFVNQRWFFEALKYPKFSKANVINGILMTVVFFIVRI 207

Query: 385 VLF--IYFFGHMFKHFDEVKSVYS------LGFY---TLLAVPPMLAIMNIFWFWKIARG 444
           +    +YFF         + SVY        GF      +    +L +MNI W  KI +G
Sbjct: 208 ISIPPMYFF---------LYSVYGTEPYIRFGFVIQSVWIVTCVILDVMNIMWMIKITKG 265

[Close]

BLAST of CmoCh02G006810 vs. ExPASy TrEMBL
Match: A0A6J1G8D2 (transmembrane protein 56-B-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451771 PE=4 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 1.2e-149
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 170 FAAIVHLPLSLAYMTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYG 229
           FAAIVHLPLSLAYMTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYG
Sbjct: 10  FAAIVHLPLSLAYMTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYG 69

Query: 230 KLSDFGKVEWNNRGFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGF 289
           KLSDFGKVEWNNRGFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGF
Sbjct: 70  KLSDFGKVEWNNRGFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGF 129

Query: 290 SIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPF 349
           SIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPF
Sbjct: 130 SIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPF 189

Query: 350 VNLRWYLDNAGQKNSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFY 409
           VNLRWYLDNAGQKNSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFY
Sbjct: 190 VNLRWYLDNAGQKNSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFY 249

Query: 410 TLLAVPPMLAIMNIFWFWKIARGMIKTLKKARHSK 445
           TLLAVPPMLAIMNIFWFWKIARGMIKTLKKARHSK
Sbjct: 250 TLLAVPPMLAIMNIFWFWKIARGMIKTLKKARHSK 284

[Close]

BLAST of CmoCh02G006810 vs. ExPASy TrEMBL
Match: A0A6J1L744 (transmembrane protein 56-B-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499774 PE=4 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 2.5e-147
Identity = 269/275 (97.82%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 170 FAAIVHLPLSLAYMTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYG 229
           FAAIVHLPLSLAYMTFSVTDASDPSKGLQW+ASVFSGIVFCKIVYTLTGILSLQSFKAYG
Sbjct: 10  FAAIVHLPLSLAYMTFSVTDASDPSKGLQWLASVFSGIVFCKIVYTLTGILSLQSFKAYG 69

Query: 230 KLSDFGKVEWNNRGFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGF 289
           +LSDFGKVEWNNRGFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGF
Sbjct: 70  QLSDFGKVEWNNRGFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGF 129

Query: 290 SIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPF 349
           SIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPF
Sbjct: 130 SIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPF 189

Query: 350 VNLRWYLDNAGQKNSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFY 409
           VNLRWYLDNAGQKNSN YVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVY LGFY
Sbjct: 190 VNLRWYLDNAGQKNSNLYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYPLGFY 249

Query: 410 TLLAVPPMLAIMNIFWFWKIARGMIKTLKKARHSK 445
           TLLAVPPMLA+MN+FWFWKIARGMIKTLKKARHSK
Sbjct: 250 TLLAVPPMLAVMNVFWFWKIARGMIKTLKKARHSK 284

[Close]

BLAST of CmoCh02G006810 vs. ExPASy TrEMBL
Match: A0A6J1G8T1 (transmembrane protein 56-B-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451771 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.8e-142
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0


Query: 183 MTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNR 242
           MTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNR
Sbjct: 1   MTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNR 60

Query: 243 GFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVL 302
           GFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVL
Sbjct: 61  GFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVL 120

Query: 303 WFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAGQK 362
           WFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAGQK
Sbjct: 121 WFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAGQK 180

Query: 363 NSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFYTLLAVPPMLAIMN 422
           NSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFYTLLAVPPMLAIMN
Sbjct: 181 NSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFYTLLAVPPMLAIMN 240

Query: 423 IFWFWKIARGMIKTLKKARHSK 445
           IFWFWKIARGMIKTLKKARHSK
Sbjct: 241 IFWFWKIARGMIKTLKKARHSK 262

[Close]

BLAST of CmoCh02G006810 vs. ExPASy TrEMBL
Match: A0A6J1L4D0 (transmembrane protein 56-B-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499774 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 3.8e-140
Identity = 256/262 (97.71%), Postives = 260/262 (99.24%), Query Frame = 0


Query: 183 MTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNR 242
           MTFSVTDASDPSKGLQW+ASVFSGIVFCKIVYTLTGILSLQSFKAYG+LSDFGKVEWNNR
Sbjct: 1   MTFSVTDASDPSKGLQWLASVFSGIVFCKIVYTLTGILSLQSFKAYGQLSDFGKVEWNNR 60

Query: 243 GFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVL 302
           GFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVL
Sbjct: 61  GFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVL 120

Query: 303 WFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAGQK 362
           WFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAGQK
Sbjct: 121 WFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAGQK 180

Query: 363 NSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFYTLLAVPPMLAIMN 422
           NSN YVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVY LGFYTLLAVPPMLA+MN
Sbjct: 181 NSNLYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYPLGFYTLLAVPPMLAVMN 240

Query: 423 IFWFWKIARGMIKTLKKARHSK 445
           +FWFWKIARGMIKTLKKARHSK
Sbjct: 241 VFWFWKIARGMIKTLKKARHSK 262

[Close]

BLAST of CmoCh02G006810 vs. ExPASy TrEMBL
Match: A0A6J1JHF4 (transmembrane protein 56-B-like OS=Cucurbita maxima OX=3661 GN=LOC111484516 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 1.6e-130
Identity = 238/262 (90.84%), Postives = 251/262 (95.80%), Query Frame = 0


Query: 183 MTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNR 242
           MT SVTDAS PSK LQW+ASVFSGIVFCKIVYTLTGI+SLQSFK YGKLSDFGKVEW NR
Sbjct: 1   MTISVTDASGPSKELQWLASVFSGIVFCKIVYTLTGIVSLQSFKTYGKLSDFGKVEWKNR 60

Query: 243 GFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVL 302
           GFSTFHALVAASSSLYLVLLSSTF+PGSSNELLIRRTSSLSD TLGFS+GYFLSDLAMVL
Sbjct: 61  GFSTFHALVAASSSLYLVLLSSTFDPGSSNELLIRRTSSLSDTTLGFSVGYFLSDLAMVL 120

Query: 303 WFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAGQK 362
           W+FPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTE TTPFVNLRWYLDNAGQK
Sbjct: 121 WYFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTECTTPFVNLRWYLDNAGQK 180

Query: 363 NSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFYTLLAVPPMLAIMN 422
           NSN YVINGIALF GWLVARI+LFIYFFGHMFKHFD+VK+VY LGFY+LL VPPMLA+MN
Sbjct: 181 NSNSYVINGIALFLGWLVARILLFIYFFGHMFKHFDQVKTVYPLGFYSLLTVPPMLAMMN 240

Query: 423 IFWFWKIARGMIKTLKKARHSK 445
           +FWFWKIARGMIKTL+KARH+K
Sbjct: 241 VFWFWKIARGMIKTLRKARHNK 262

[Close]

BLAST of CmoCh02G006810 vs. NCBI nr
Match: XP_022948078.1 (transmembrane protein 56-B-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 539.7 bits (1389), Expect = 2.4e-149
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 170 FAAIVHLPLSLAYMTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYG 229
           FAAIVHLPLSLAYMTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYG
Sbjct: 10  FAAIVHLPLSLAYMTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYG 69

Query: 230 KLSDFGKVEWNNRGFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGF 289
           KLSDFGKVEWNNRGFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGF
Sbjct: 70  KLSDFGKVEWNNRGFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGF 129

Query: 290 SIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPF 349
           SIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPF
Sbjct: 130 SIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPF 189

Query: 350 VNLRWYLDNAGQKNSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFY 409
           VNLRWYLDNAGQKNSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFY
Sbjct: 190 VNLRWYLDNAGQKNSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFY 249

Query: 410 TLLAVPPMLAIMNIFWFWKIARGMIKTLKKARHSK 445
           TLLAVPPMLAIMNIFWFWKIARGMIKTLKKARHSK
Sbjct: 250 TLLAVPPMLAIMNIFWFWKIARGMIKTLKKARHSK 284

[Close]

BLAST of CmoCh02G006810 vs. NCBI nr
Match: XP_023533878.1 (transmembrane protein 56-B-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 534.3 bits (1375), Expect = 1.0e-147
Identity = 272/275 (98.91%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 170 FAAIVHLPLSLAYMTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYG 229
           FAAIVHLPLSLAYMTFSVTDASDPSKGLQW+ASVFSGIVFCKIVYTLTGILSLQSFKAYG
Sbjct: 10  FAAIVHLPLSLAYMTFSVTDASDPSKGLQWLASVFSGIVFCKIVYTLTGILSLQSFKAYG 69

Query: 230 KLSDFGKVEWNNRGFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGF 289
           KLSDFGKVEWNNRGFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGF
Sbjct: 70  KLSDFGKVEWNNRGFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGF 129

Query: 290 SIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPF 349
           SIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPF
Sbjct: 130 SIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPF 189

Query: 350 VNLRWYLDNAGQKNSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFY 409
           VNLRWYLDNAGQKNSN YVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVY LGFY
Sbjct: 190 VNLRWYLDNAGQKNSNLYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYPLGFY 249

Query: 410 TLLAVPPMLAIMNIFWFWKIARGMIKTLKKARHSK 445
           TLLAVPPMLAIMNIFWFWKIARGMIKTLKKARHSK
Sbjct: 250 TLLAVPPMLAIMNIFWFWKIARGMIKTLKKARHSK 284

[Close]

BLAST of CmoCh02G006810 vs. NCBI nr
Match: XP_023007223.1 (transmembrane protein 56-B-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 531.9 bits (1369), Expect = 5.1e-147
Identity = 269/275 (97.82%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 170 FAAIVHLPLSLAYMTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYG 229
           FAAIVHLPLSLAYMTFSVTDASDPSKGLQW+ASVFSGIVFCKIVYTLTGILSLQSFKAYG
Sbjct: 10  FAAIVHLPLSLAYMTFSVTDASDPSKGLQWLASVFSGIVFCKIVYTLTGILSLQSFKAYG 69

Query: 230 KLSDFGKVEWNNRGFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGF 289
           +LSDFGKVEWNNRGFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGF
Sbjct: 70  QLSDFGKVEWNNRGFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGF 129

Query: 290 SIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPF 349
           SIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPF
Sbjct: 130 SIGYFLSDLAMVLWFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPF 189

Query: 350 VNLRWYLDNAGQKNSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFY 409
           VNLRWYLDNAGQKNSN YVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVY LGFY
Sbjct: 190 VNLRWYLDNAGQKNSNLYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYPLGFY 249

Query: 410 TLLAVPPMLAIMNIFWFWKIARGMIKTLKKARHSK 445
           TLLAVPPMLA+MN+FWFWKIARGMIKTLKKARHSK
Sbjct: 250 TLLAVPPMLAVMNVFWFWKIARGMIKTLKKARHSK 284

[Close]

BLAST of CmoCh02G006810 vs. NCBI nr
Match: XP_022948079.1 (transmembrane protein 56-B-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 515.8 bits (1327), Expect = 3.8e-142
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0


Query: 183 MTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNR 242
           MTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNR
Sbjct: 1   MTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNR 60

Query: 243 GFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVL 302
           GFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVL
Sbjct: 61  GFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVL 120

Query: 303 WFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAGQK 362
           WFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAGQK
Sbjct: 121 WFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAGQK 180

Query: 363 NSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFYTLLAVPPMLAIMN 422
           NSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFYTLLAVPPMLAIMN
Sbjct: 181 NSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFYTLLAVPPMLAIMN 240

Query: 423 IFWFWKIARGMIKTLKKARHSK 445
           IFWFWKIARGMIKTLKKARHSK
Sbjct: 241 IFWFWKIARGMIKTLKKARHSK 262

[Close]

BLAST of CmoCh02G006810 vs. NCBI nr
Match: XP_023533880.1 (transmembrane protein 56-B-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 510.4 bits (1313), Expect = 1.6e-140
Identity = 259/262 (98.85%), Postives = 260/262 (99.24%), Query Frame = 0


Query: 183 MTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNR 242
           MTFSVTDASDPSKGLQW+ASVFSGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNR
Sbjct: 1   MTFSVTDASDPSKGLQWLASVFSGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNR 60

Query: 243 GFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVL 302
           GFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVL
Sbjct: 61  GFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVL 120

Query: 303 WFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAGQK 362
           WFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAGQK
Sbjct: 121 WFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAGQK 180

Query: 363 NSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFYTLLAVPPMLAIMN 422
           NSN YVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVY LGFYTLLAVPPMLAIMN
Sbjct: 181 NSNLYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYPLGFYTLLAVPPMLAIMN 240

Query: 423 IFWFWKIARGMIKTLKKARHSK 445
           IFWFWKIARGMIKTLKKARHSK
Sbjct: 241 IFWFWKIARGMIKTLKKARHSK 262

[Close]

BLAST of CmoCh02G006810 vs. TAIR 10
Match: AT4G10360.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 301.6 bits (771), Expect = 1.0e-81
Identity = 145/261 (55.56%), Postives = 190/261 (72.80%), Query Frame = 0


Query: 183 MTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNR 242
           MT    D    S+ L  +AS+ SG + CKIVY LT  +S   F  YGKL    ++EWNNR
Sbjct: 1   MTTDSDDGFVSSRQLLLLASICSGALMCKIVYDLTRFISPLLFSVYGKLDSKVRMEWNNR 60

Query: 243 GFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVL 302
           GFSTFHA+  + +S+Y +++S  F+     + +I  T+ LS+  +G S+GYFL+DLAM+ 
Sbjct: 61  GFSTFHAVFTSVASIYFLVISDQFDENVHGDSVINSTTRLSESVMGISLGYFLADLAMIF 120

Query: 303 WFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAGQK 362
           W+FP LGG+EYV HH LS+F+II S+ SGQ Q YI +VL +E TTPFVNLRWYLDN+GQK
Sbjct: 121 WYFPTLGGIEYVFHHFLSMFAIILSVTSGQSQFYIFLVLLSEATTPFVNLRWYLDNSGQK 180

Query: 363 NSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFYTLLAVPPMLAIMN 422
            S  Y +NGIALF GWLVAR++LFI+FF HM+ HF +VK V+ LGFY+LL +PP LA+MN
Sbjct: 181 GSKAYTLNGIALFLGWLVARVLLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMN 240

Query: 423 IFWFWKIARGMIKTLKKARHS 444
           + WFWKI +G+IKTL KA+ S
Sbjct: 241 LLWFWKITKGLIKTLSKAKTS 261

[Close]

BLAST of CmoCh02G006810 vs. TAIR 10
Match: AT4G10360.2 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 301.6 bits (771), Expect = 1.0e-81
Identity = 145/261 (55.56%), Postives = 190/261 (72.80%), Query Frame = 0


Query: 183 MTFSVTDASDPSKGLQWMASVFSGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNR 242
           MT    D    S+ L  +AS+ SG + CKIVY LT  +S   F  YGKL    ++EWNNR
Sbjct: 1   MTTDSDDGFVSSRQLLLLASICSGALMCKIVYDLTRFISPLLFSVYGKLDSKVRMEWNNR 60

Query: 243 GFSTFHALVAASSSLYLVLLSSTFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVL 302
           GFSTFHA+  + +S+Y +++S  F+     + +I  T+ LS+  +G S+GYFL+DLAM+ 
Sbjct: 61  GFSTFHAVFTSVASIYFLVISDQFDENVHGDSVINSTTRLSESVMGISLGYFLADLAMIF 120

Query: 303 WFFPALGGLEYVLHHGLSLFSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAGQK 362
           W+FP LGG+EYV HH LS+F+II S+ SGQ Q YI +VL +E TTPFVNLRWYLDN+GQK
Sbjct: 121 WYFPTLGGIEYVFHHFLSMFAIILSVTSGQSQFYIFLVLLSEATTPFVNLRWYLDNSGQK 180

Query: 363 NSNFYVINGIALFFGWLVARIVLFIYFFGHMFKHFDEVKSVYSLGFYTLLAVPPMLAIMN 422
            S  Y +NGIALF GWLVAR++LFI+FF HM+ HF +VK V+ LGFY+LL +PP LA+MN
Sbjct: 181 GSKAYTLNGIALFLGWLVARVLLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMN 240

Query: 423 IFWFWKIARGMIKTLKKARHS 444
           + WFWKI +G+IKTL KA+ S
Sbjct: 241 LLWFWKITKGLIKTLSKAKTS 261

[Close]

BLAST of CmoCh02G006810 vs. TAIR 10
Match: AT1G31300.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 240.4 bits (612), Expect = 2.9e-63
Identity = 118/238 (49.58%), Postives = 162/238 (68.07%), Query Frame = 0


Query: 202 SVFSGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNRGFSTFHALVAASSSLYLVL 261
           SV +GI  CK+VY L   +S    K Y  L+   ++EWNNRG ST HA+  ++ SLY V 
Sbjct: 37  SVLTGIFLCKVVYDLCHFISNSHSKTYIILTKIQRIEWNNRGISTVHAIFISAMSLYFVF 96

Query: 262 LSSTFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVLWFFPALGGLEYVLHHGLSL 321
            S  F+    N+L++ R+S LS + LG SIGYFL+DL M+ W +P+LGG+EY++HH LS 
Sbjct: 97  WSDLFSDRWHNDLVVFRSSRLSSLGLGISIGYFLADLGMIFWKYPSLGGIEYIVHHSLSG 156

Query: 322 FSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAGQKNSNFYVINGIALFFGWLVA 381
            ++  SL SG+GQ+Y  MVL +EITTP +NLRWYLD AG K S  YV+NG+ +F  WLVA
Sbjct: 157 VAVAYSLFSGEGQLYTYMVLISEITTPEINLRWYLDTAGMKKSLAYVVNGVFIFLAWLVA 216

Query: 382 RIVLFIYFFGHMFKHFDEVKSVYSLGFYTLLAVPPMLAIMNIFWFWKIARGMIKTLKK 440
           RI+LFIY F H++ H+++V  ++  G+  +  VP  L +MN+ WF KI RG+ KTL K
Sbjct: 217 RILLFIYMFYHVYLHYNQVMRMHIFGYVLVFGVPAALGVMNLIWFGKIVRGVKKTLAK 274

[Close]

BLAST of CmoCh02G006810 vs. TAIR 10
Match: AT1G31300.2 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 240.4 bits (612), Expect = 2.9e-63
Identity = 118/238 (49.58%), Postives = 162/238 (68.07%), Query Frame = 0


Query: 202 SVFSGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNRGFSTFHALVAASSSLYLVL 261
           SV +GI  CK+VY L   +S    K Y  L+   ++EWNNRG ST HA+  ++ SLY V 
Sbjct: 37  SVLTGIFLCKVVYDLCHFISNSHSKTYIILTKIQRIEWNNRGISTVHAIFISAMSLYFVF 96

Query: 262 LSSTFNPGSSNELLIRRTSSLSDMTLGFSIGYFLSDLAMVLWFFPALGGLEYVLHHGLSL 321
            S  F+    N+L++ R+S LS + LG SIGYFL+DL M+ W +P+LGG+EY++HH LS 
Sbjct: 97  WSDLFSDRWHNDLVVFRSSRLSSLGLGISIGYFLADLGMIFWKYPSLGGIEYIVHHSLSG 156

Query: 322 FSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAGQKNSNFYVINGIALFFGWLVA 381
            ++  SL SG+GQ+Y  MVL +EITTP +NLRWYLD AG K S  YV+NG+ +F  WLVA
Sbjct: 157 VAVAYSLFSGEGQLYTYMVLISEITTPEINLRWYLDTAGMKKSLAYVVNGVFIFLAWLVA 216

Query: 382 RIVLFIYFFGHMFKHFDEVKSVYSLGFYTLLAVPPMLAIMNIFWFWKIARGMIKTLKK 440
           RI+LFIY F H++ H+++V  ++  G+  +  VP  L +MN+ WF KI RG+ KTL K
Sbjct: 217 RILLFIYMFYHVYLHYNQVMRMHIFGYVLVFGVPAALGVMNLIWFGKIVRGVKKTLAK 274

[Close]

BLAST of CmoCh02G006810 vs. TAIR 10
Match: AT4G19645.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 233.4 bits (594), Expect = 3.5e-61
Identity = 116/239 (48.54%), Postives = 160/239 (66.95%), Query Frame = 0


Query: 202 SVFSGIVFCKIVYTLTGILSLQSFKAYGKLSDFGKVEWNNRGFSTFHALVAASSSLYLVL 261
           SV  GI  CK+VY LT + S    K+Y  L+   ++EWNNRG ST HA+  +  +LY   
Sbjct: 28  SVLVGICLCKLVYDLTELFSSIHVKSYSALTKIKRIEWNNRGISTVHAIFISFMALYFAF 87

Query: 262 LSSTFNPGSSNE-LLIRRTSSLSDMTLGFSIGYFLSDLAMVLWFFPALGGLEYVLHHGLS 321
            S  F+   S E L + R S LS   LG S+GYFL+DL M+ W +P+LGG EY+LHH LS
Sbjct: 88  FSDLFSDQRSLETLTVFRNSPLSTFGLGVSVGYFLADLGMIFWLYPSLGGSEYILHHCLS 147

Query: 322 LFSIIQSLLSGQGQVYILMVLFTEITTPFVNLRWYLDNAGQKNSNFYVINGIALFFGWLV 381
             ++  SL SG+ Q+Y  MVL +E+TTP +NLRWYLD AG K S  Y++NG+A+FF WL 
Sbjct: 148 GTAVAYSLFSGEAQLYTYMVLISEVTTPEINLRWYLDIAGLKRSKAYLVNGVAIFFAWLT 207

Query: 382 ARIVLFIYFFGHMFKHFDEVKSVYSLGFYTLLAVPPMLAIMNIFWFWKIARGMIKTLKK 440
           ARI+LFIY F H++ H+D+V  +++ G+  +  VP  L++MN+ WF KI +G+ KTL+K
Sbjct: 208 ARILLFIYMFYHVYTHYDQVIEMHTFGYLLVFVVPISLSVMNLIWFGKIVKGLKKTLEK 266

The following BLAST results are available for this feature:

BLAST of CmoCh02G006810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6PGS5	2.3e-17	28.93	TLC domain-containing protein 4-B OS=Xenopus laevis OX=8355 GN=tlcd4-b PE=2 SV=1	[more]
Q96MV1	3.3e-16	28.00	TLC domain-containing protein 4 OS=Homo sapiens OX=9606 GN=TLCD4 PE=1 SV=1	[more]
Q6P4N1	5.3e-14	28.45	TLC domain-containing protein 4 OS=Xenopus tropicalis OX=8364 GN=tlcd4 PE=2 SV=1	[more]
Q6GLX2	1.5e-13	27.80	TLC domain-containing protein 4-A OS=Xenopus laevis OX=8355 GN=tlcd4-a PE=2 SV=1	[more]
Q8CGF5	6.5e-12	27.78	TLC domain-containing protein 4 OS=Mus musculus OX=10090 GN=Tlcd4 PE=2 SV=1	[more]

BLAST of CmoCh02G006810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G8D2	1.2e-149	100.00	transmembrane protein 56-B-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1L744	2.5e-147	97.82	transmembrane protein 56-B-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1G8T1	1.8e-142	100.00	transmembrane protein 56-B-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1L4D0	3.8e-140	97.71	transmembrane protein 56-B-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1JHF4	1.6e-130	90.84	transmembrane protein 56-B-like OS=Cucurbita maxima OX=3661 GN=LOC111484516 PE=4...	[more]

BLAST of CmoCh02G006810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948078.1	2.4e-149	100.00	transmembrane protein 56-B-like isoform X1 [Cucurbita moschata]	[more]
XP_023533878.1	1.0e-147	98.91	transmembrane protein 56-B-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023007223.1	5.1e-147	97.82	transmembrane protein 56-B-like isoform X1 [Cucurbita maxima]	[more]
XP_022948079.1	3.8e-142	100.00	transmembrane protein 56-B-like isoform X2 [Cucurbita moschata]	[more]
XP_023533880.1	1.6e-140	98.85	transmembrane protein 56-B-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh02G006810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10360.1	1.0e-81	55.56	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT4G10360.2	1.0e-81	55.56	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT1G31300.1	2.9e-63	49.58	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT1G31300.2	2.9e-63	49.58	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT4G19645.1	3.5e-61	48.54	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006634	TRAM/LAG1/CLN8 homology domain	SMART	SM00724	lag1_27	coord: 234..438 e-value: 8.1E-45 score: 164.9
IPR006634	TRAM/LAG1/CLN8 homology domain	PFAM	PF03798	TRAM_LAG1_CLN8	coord: 238..431 e-value: 8.8E-30 score: 103.9
IPR006634	TRAM/LAG1/CLN8 homology domain	PROSITE	PS50922	TLC	coord: 234..438 score: 39.737751
None	No IPR available	PANTHER	PTHR13439:SF54	OS05G0485300 PROTEIN	coord: 193..443
None	No IPR available	PANTHER	PTHR13439	CT120 PROTEIN	coord: 193..443

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G006810.1	CmoCh02G006810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055088	lipid homeostasis
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane