CmoCh02G006580 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G006580
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	DEAD-box ATP-dependent RNA helicase 36
Location	Cmo_Chr02: 4150155 .. 4153407 (-)
RNA-Seq Expression	CmoCh02G006580
Synteny	CmoCh02G006580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGTTCAACAATTCCGTTTTACTGGTCGCCAACAAGCCTTCCACTGTCGAGAAAAGAGATAAATTGGCCGTGAATCCATCAAATTTTTGCTGCGATTGTTCAAACCTGGAAACCCTTTGAATTGTTGTTCATCATCTCTGATTTCATGGATCAAGAAGTAACAGTCGACGAGAATTTCCCTCTTTTTTCAAAATCCCATCGGAAAACCCATAAACCTTCACAAAAAAACCCCACCGCCGCCGCTGTTTCCGCCGCCGTCGATAATACCGCCGAGAAGGCGCCTATTCAGATTGAGAAATCCACAGAACTCACCACTAAATCCACGAACGTTACATTTGCCGACCTCGGCTTATCGGAATGGATCGTCCAGACCTGCAAGGAATTGGCTATGAAGAAGCCAACGGCGGTTCAAACCCACTGCATCCCGAAGATTCTGGCTGGCCTCGACGTACTAGGTCTTGCTCAAACTGGAAGCGGGAAGACTGCGGCGTTTGCCTTGCCGATTCTTCAACAGCTTTCGGAAACCCCTTTCGGCGTCTTTGCGTTGGTCGTCACTCCCACAAGGGAATTGGCTTATCAATTGGCCGAGCAGTTTAGGGCACTCGGTTCCTCCTTGAATTTGCGGTGCTCTGTGGTTGTCGGAGGCATGGATATGTTGAACCAGACGCAGAGTTTGCTGAAGAGACCTCACATTGTAATTGCAACGCCGGGGAGGGTTAAGGTATTGCTGGAGGAGAATCCTGATATCCCTGCCGTCTTCTCCAAGACTAAGGTTCGTTGCTTGTATTGTTCTTATTGTTCATGTTCTCATAGCTTTCAAGAACATGAAATTCTCAGGCAAATATATACCAATCTGGTTGTGTTCTTGATATCTTATTGATCTTTTTATACACCAGTTCCTAGTTTTGGATGAAGCTGATAGAGTATTGGATGTTGGATTTGAAGAGGAATTGAAAGTTATCTTCAAATGCTTGCCACGAAATCGTCAAACTCTATTGTTCTCTGCAACAATGACAAAGGATCTTGAAACACTCCTTGAGCTTTCTGCAAACAAAGCATACTTTTATGAGGCTTATGAAGGGTTCAAGACAGTTGATATGCTTAAGCAGCAATATGTATTCATACCAAAGAATGTGAAGGATGTTTATCTACTCCACATTATGTCTAAAATGAAAGACATGGGCGTTCGATCAGCAATCATATTTGTGCACACTTGCAAGTATGTTTTTTGGGCTTTCACCTCCCATTGTTCCTTGTTTCTCTCATTGCTTACTCTTTCTTAAACTATATGCAGAAGCTGTCACCATTTAGGTTTGTTACTCGGAGAACTTGATCAAGATGTGGTGGCGTTGCATTCATTCAAGTCACAGTCTGAGAGGCTTGCTGCGCTTTATCGATTCAAATCGGGACAAGCTCCTGTTTTGCTTGCAACCGATGTAGCTAGTCGGGGTTTGGACATTCCGACGGTTGATCTTGTTATAAATTACGATATTCCAAGGTGGTAATTGATTTCATGTGGTTAAGTAGAAATGTTTCTAGAATGCTGGTGATGTTAATATAACAACATTATGACTCAGGTTTCCAAGAGATTATGTTCACCGAGTGGGACGTACTGCAAGAGCAGGTCGACATGGATTGGCTGTGAGCTTTATTACCCAGGTGAGTGTTACTTAAGTGATTGATAACTTTTTAACTCGATTTGTTTCTTGGACGCGAACTCCGCATCGAATGTCAAGGAATTTCTCTATAAACTTGTTTTTTTTATATATATGGAGTGAATAGTAAGTCTGCTTAAGCTTGTATTATATTCATAACATAGTAGTTGTTCTTGCTATTGCTTCTATATTCAACCTTCTCCAATTCACAAGGGCTATTCTTAAAGAAAGTTGTGATGGTAAATGCTGATTCGTAACTACAATTTCATAATCTCGATGGTATATACATGTAGGAAAGTAGTATATTGCTAATGTTTTTGTTTTCGTCGCTCCAAGCAAGTGTTTTTTTCGTTGGATTTTCTTGTTTTTCTTACCTTCGATGAATGTCGATCTCGTATACAGAATGATGTGGAGCTTATTCATGAAATAGAGGCCAATCTAGGAAAGAAATTGGAGATTTTCGAATGCAAGGAGAATGAGGTGCTTGAGAATGTTACAAAGGTATGCTTTGGCCTTTTCCCCCCTAATATGATTGATTTTTTCAGTGTATTATATGCTGTTTGCCAATTGAACTTCACAACTCATCTCATCTGAGTGGTTAACTTCTGAATGCGGACGTTTTCCTTTAAAAAGTGGAAATAAAACATGTAGACTTCACAAGTCGAGTTCATGCTACTGAGGAAAAACGAGATTCCTGCACTCTAATTAGTACATCATGGAGCTTCCTAGTGAATTGCTTTGCTATAGTCACTCTGTGTATGAAGACATCTGTTCTTGGGGAAATCACTCTAGAGTTATTGTACGGCCCAAGCCCACCGTCAGTAGTTATTGTCCTCTTTGGGCTGTCCCTTTTGGGCTTCCCCTCAAGGTTTTTAAAATGCCTCTACTAGGGAGAGGTTTCCATACCCTTATAAAGAATGCTTCATTCTCCTCCCCAATCGATGTGGGATCTCACCGGCACAGTTTTTCTAGTGTTATGACTTATGGGAACAATTATTTGCTGTAATAAGATCAGCCTAGATACTTGTTTCAGTCTAGAGCTTATGAGTTTTCTTATCTCTTCAGTCGTATCAGTCATTTTTCAGCTCAACTACCAGTAAATTTAGACCAAACACTAGAGATACCGCCATGTCGATATGATGGGACACTGTTTCAGTAGCTCATAGGCTCCAGAGATACCGAACACTAGAGATACGAAACACTAAATGTATGCATGAAATGACTATATTACTTAAAAAATTACTAATCTTCTCAACATTGGGGATTTTAGCATTTCTTGTCTGCATACCAGAAGTGAATTTGAGCGAGATTAACTCGTGTTTGCAACGTTTGTACACAGGTATACAAGGCAAGACGTGTGGCAGCAATGAAGATGGTGGATGATGGATTTGAGGAGAAAGTGAAAGAACGAAAGAAACAGAAATTTAAAATATTGGCAGAGAAAGGATTGTTAAAGAAAAGGAGCAGAAAGAGAAGAAGAGAAAAAGCTTCCAAGGAGTTGGGAGCAGTATGAGAAAATCTGTACCACATCAAAATTTTGATATTTCACTAACTCAATACATCTGTGATTATTATTATTGCTTTTGGGTCTTTAGCAG

mRNA sequence

TAGTTCAACAATTCCGTTTTACTGGTCGCCAACAAGCCTTCCACTGTCGAGAAAAGAGATAAATTGGCCGTGAATCCATCAAATTTTTGCTGCGATTGTTCAAACCTGGAAACCCTTTGAATTGTTGTTCATCATCTCTGATTTCATGGATCAAGAAGTAACAGTCGACGAGAATTTCCCTCTTTTTTCAAAATCCCATCGGAAAACCCATAAACCTTCACAAAAAAACCCCACCGCCGCCGCTGTTTCCGCCGCCGTCGATAATACCGCCGAGAAGGCGCCTATTCAGATTGAGAAATCCACAGAACTCACCACTAAATCCACGAACGTTACATTTGCCGACCTCGGCTTATCGGAATGGATCGTCCAGACCTGCAAGGAATTGGCTATGAAGAAGCCAACGGCGGTTCAAACCCACTGCATCCCGAAGATTCTGGCTGGCCTCGACGTACTAGGTCTTGCTCAAACTGGAAGCGGGAAGACTGCGGCGTTTGCCTTGCCGATTCTTCAACAGCTTTCGGAAACCCCTTTCGGCGTCTTTGCGTTGGTCGTCACTCCCACAAGGGAATTGGCTTATCAATTGGCCGAGCAGTTTAGGGCACTCGGTTCCTCCTTGAATTTGCGGTGCTCTGTGGTTGTCGGAGGCATGGATATGTTGAACCAGACGCAGAGTTTGCTGAAGAGACCTCACATTGTAATTGCAACGCCGGGGAGGGTTAAGGTATTGCTGGAGGAGAATCCTGATATCCCTGCCGTCTTCTCCAAGACTAAGTTCCTAGTTTTGGATGAAGCTGATAGAGTATTGGATGTTGGATTTGAAGAGGAATTGAAAGTTATCTTCAAATGCTTGCCACGAAATCGTCAAACTCTATTGTTCTCTGCAACAATGACAAAGGATCTTGAAACACTCCTTGAGCTTTCTGCAAACAAAGCATACTTTTATGAGGCTTATGAAGGGTTCAAGACAGTTGATATGCTTAAGCAGCAATATGTATTCATACCAAAGAATGTGAAGGATGTTTATCTACTCCACATTATGTCTAAAATGAAAGACATGGGCGTTCGATCAGCAATCATATTTGTGCACACTTGCAAAAGCTGTCACCATTTAGGTTTGTTACTCGGAGAACTTGATCAAGATGTGGTGGCGTTGCATTCATTCAAGTCACAGTCTGAGAGGCTTGCTGCGCTTTATCGATTCAAATCGGGACAAGCTCCTGTTTTGCTTGCAACCGATGTAGCTAGTCGGGGTTTGGACATTCCGACGGTTGATCTTGTTATAAATTACGATATTCCAAGGTGGTTTCCAAGAGATTATGTTCACCGAGTGGGACGTACTGCAAGAGCAGGTCGACATGGATTGGCTGTGAGCTTTATTACCCAGAATGATGTGGAGCTTATTCATGAAATAGAGGCCAATCTAGGAAAGAAATTGGAGATTTTCGAATGCAAGGAGAATGAGGTGCTTGAGAATGTTACAAAGGTATACAAGGCAAGACGTGTGGCAGCAATGAAGATGGTGGATGATGGATTTGAGGAGAAAGTGAAAGAACGAAAGAAACAGAAATTTAAAATATTGGCAGAGAAAGGATTGTTAAAGAAAAGGAGCAGAAAGAGAAGAAGAGAAAAAGCTTCCAAGGAGTTGGGAGCAGTATGAGAAAATCTGTACCACATCAAAATTTTGATATTTCACTAACTCAATACATCTGTGATTATTATTATTGCTTTTGGGTCTTTAGCAG

Coding sequence (CDS)

ATGGATCAAGAAGTAACAGTCGACGAGAATTTCCCTCTTTTTTCAAAATCCCATCGGAAAACCCATAAACCTTCACAAAAAAACCCCACCGCCGCCGCTGTTTCCGCCGCCGTCGATAATACCGCCGAGAAGGCGCCTATTCAGATTGAGAAATCCACAGAACTCACCACTAAATCCACGAACGTTACATTTGCCGACCTCGGCTTATCGGAATGGATCGTCCAGACCTGCAAGGAATTGGCTATGAAGAAGCCAACGGCGGTTCAAACCCACTGCATCCCGAAGATTCTGGCTGGCCTCGACGTACTAGGTCTTGCTCAAACTGGAAGCGGGAAGACTGCGGCGTTTGCCTTGCCGATTCTTCAACAGCTTTCGGAAACCCCTTTCGGCGTCTTTGCGTTGGTCGTCACTCCCACAAGGGAATTGGCTTATCAATTGGCCGAGCAGTTTAGGGCACTCGGTTCCTCCTTGAATTTGCGGTGCTCTGTGGTTGTCGGAGGCATGGATATGTTGAACCAGACGCAGAGTTTGCTGAAGAGACCTCACATTGTAATTGCAACGCCGGGGAGGGTTAAGGTATTGCTGGAGGAGAATCCTGATATCCCTGCCGTCTTCTCCAAGACTAAGTTCCTAGTTTTGGATGAAGCTGATAGAGTATTGGATGTTGGATTTGAAGAGGAATTGAAAGTTATCTTCAAATGCTTGCCACGAAATCGTCAAACTCTATTGTTCTCTGCAACAATGACAAAGGATCTTGAAACACTCCTTGAGCTTTCTGCAAACAAAGCATACTTTTATGAGGCTTATGAAGGGTTCAAGACAGTTGATATGCTTAAGCAGCAATATGTATTCATACCAAAGAATGTGAAGGATGTTTATCTACTCCACATTATGTCTAAAATGAAAGACATGGGCGTTCGATCAGCAATCATATTTGTGCACACTTGCAAAAGCTGTCACCATTTAGGTTTGTTACTCGGAGAACTTGATCAAGATGTGGTGGCGTTGCATTCATTCAAGTCACAGTCTGAGAGGCTTGCTGCGCTTTATCGATTCAAATCGGGACAAGCTCCTGTTTTGCTTGCAACCGATGTAGCTAGTCGGGGTTTGGACATTCCGACGGTTGATCTTGTTATAAATTACGATATTCCAAGGTGGTTTCCAAGAGATTATGTTCACCGAGTGGGACGTACTGCAAGAGCAGGTCGACATGGATTGGCTGTGAGCTTTATTACCCAGAATGATGTGGAGCTTATTCATGAAATAGAGGCCAATCTAGGAAAGAAATTGGAGATTTTCGAATGCAAGGAGAATGAGGTGCTTGAGAATGTTACAAAGGTATACAAGGCAAGACGTGTGGCAGCAATGAAGATGGTGGATGATGGATTTGAGGAGAAAGTGAAAGAACGAAAGAAACAGAAATTTAAAATATTGGCAGAGAAAGGATTGTTAAAGAAAAGGAGCAGAAAGAGAAGAAGAGAAAAAGCTTCCAAGGAGTTGGGAGCAGTATGA

Protein sequence

MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKSTNVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSKMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVLLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAEKGLLKKRSRKRRREKASKELGAV

Homology

[Close]

BLAST of CmoCh02G006580 vs. ExPASy Swiss-Prot
Match: Q9SA27 (DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana OX=3702 GN=RH36 PE=2 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 3.2e-172
Identity = 318/473 (67.23%), Postives = 386/473 (81.61%), Query Frame = 0


Query: 25  SQKNPTAAAVSAAVDNTAEKAPIQIEKSTEL-----TTKSTNVTFADLGLSEWIVQTCKE 84
           S+KNP       +    +++   Q EK T       TT +TN  F  LGL+EW V+TCKE
Sbjct: 18  SRKNPKTVVNIQSQKLDSDQNTPQFEKFTNPNPSSDTTSATN--FEGLGLAEWAVETCKE 77

Query: 85  LAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLSETPFGVFALVVTPT 144
           L M+KPT VQTHC+PKILAG DVLGLAQTGSGKTAAFALPIL +L+E P+GVFALVVTPT
Sbjct: 78  LGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDPYGVFALVVTPT 137

Query: 145 RELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRVKVLLEENP 204
           RELA+QLAEQF+ALGS LNLRCSV+VGGMDML QT SL+ RPHIVI TPGR+KVLLE NP
Sbjct: 138 RELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNP 197

Query: 205 DIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFSATMTKDLETLLELS 264
           D+P VFS+TKFLVLDEADRVLDVGF++EL+ IF+CLP++RQTLLFSATMT +L+ LLE S
Sbjct: 198 DVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALLEHS 257

Query: 265 ANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSKMKDMGVRSAIIFVHTCKSC 324
           +NKAYFYEAYEG KTVD L QQ++F  K+ K++YL+HI+S+M+D G+RSA+IFV TC++C
Sbjct: 258 SNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTC 317

Query: 325 HHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVLLATDVASRGLDIPTVDLVI 384
             L L+L EL+ + +A+HS  SQS RL+AL +FKSG+ P+LLATDVASRGLDIPTVDLVI
Sbjct: 318 QRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVI 377

Query: 385 NYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEANLGKKLEIFECKENE 444
           NYDIPR  PRDYVHRVGRTARAGR GLAVS IT+ DV+LIH+IE  +GKK+E +  K   
Sbjct: 378 NYDIPR-DPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEPYNKKVIT 437

Query: 445 VLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAEKGLLKKRSRKRR 493
               VTKV KA+RVA MKM+D+GFE+KVK+R+K K K LA+KGLLKKR ++++
Sbjct: 438 DSLEVTKVSKAKRVAMMKMLDNGFEDKVKDRRKLKRKTLADKGLLKKRGKRQK 487

[Close]

BLAST of CmoCh02G006580 vs. ExPASy Swiss-Prot
Match: Q8L4E9 (DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0633500 PE=3 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 9.0e-143
Identity = 271/501 (54.09%), Postives = 355/501 (70.86%), Query Frame = 0


Query: 11  FPLFSKSHRKTHKPSQ----------KNPTAAAVSAAVD------NTAEKAPIQIEKSTE 70
           F LFSK      KP Q          + P   + S A++      + A  A +      +
Sbjct: 10  FLLFSKPKSSKKKPKQEAEPQVHTQPEEPPNPSPSPAIEPDLRDSDEAPAAAVTEHAGDD 69

Query: 71  LTTKSTNVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTA 130
               +   TFA+LGLS+W+V  C  L M+ PTAVQ  CIP+ L G DVLG+A+TGSGKTA
Sbjct: 70  AAAAAVPSTFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTA 129

Query: 131 AFALPILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQT 190
           AFALPIL +L E P+GV AL + PTRELA QLAEQFRALG+ L LRC   +GG D L Q 
Sbjct: 130 AFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQA 189

Query: 191 QSLLKRPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKC 250
           + L +RPH+V+ATPGR+  L+ ++PD+  VF++TKFLVLDEADRVLD+ FEE+L+VIF  
Sbjct: 190 KGLARRPHVVVATPGRIATLINDDPDLAKVFARTKFLVLDEADRVLDINFEEDLRVIFGS 249

Query: 251 LPRNRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYL 310
           LP+ RQT LFSAT++ +L +LLELS N +YF+EAYEGFKTVD LKQ Y+ +P + K++YL
Sbjct: 250 LPKKRQTFLFSATISDNLRSLLELSGNNSYFFEAYEGFKTVDTLKQLYIHVPPDAKELYL 309

Query: 311 LHIMSKMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKS 370
            +++SKM +  +RS I+FV TC++C +L  LL EL    V+LHS K QS RLAAL+ FKS
Sbjct: 310 FYLLSKMNEDNIRSVIVFVSTCRTCQYLDFLLEELGHPAVSLHSHKPQSRRLAALHNFKS 369

Query: 371 GQAPVLLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFI-TQ 430
            + PVLLATDVASRGLDI TVDLVINYD+PR +PRDY+HRVGRTARA R GL++SFI TQ
Sbjct: 370 SKVPVLLATDVASRGLDIQTVDLVINYDVPR-YPRDYIHRVGRTARATRGGLSISFITTQ 429

Query: 431 NDVELIHEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQ 490
            D+ L+HEIE  +GK+L  ++ +  +V ++ TKV+KARR+A MKM D+G E+KV+ RK+Q
Sbjct: 430 RDIRLLHEIEDVVGKQLGAYDGEMRDVNKDATKVFKARRLANMKMADEGHEDKVQARKEQ 489

Query: 491 KFKILAEKGLLKKRSRKRRRE 495
                      KKR+++R+R+
Sbjct: 490 -----------KKRAQERKRK 498

[Close]

BLAST of CmoCh02G006580 vs. ExPASy Swiss-Prot
Match: Q9Y6V7 (Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens OX=9606 GN=DDX49 PE=1 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.2e-107
Identity = 224/449 (49.89%), Postives = 296/449 (65.92%), Query Frame = 0


Query: 64  FADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQ 123
           FA+LGLS W+V+ C++L +K+PT VQ  CIP IL G D LG A+TGSGKTAAF LPILQ+
Sbjct: 4   FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63

Query: 124 LSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHI 183
           LSE P+G+F LV+TPTRELAYQ+AEQFR LG  L L+  ++VGGMDM+ Q   L ++PH+
Sbjct: 64  LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123

Query: 184 VIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVG---FEEELKVIFKCLPRNRQ 243
           VIATPGR+   L  +        K +FLV+DEADR+L+ G   F  +L+ I   +P  RQ
Sbjct: 124 VIATPGRLADHLRSSNTFS--IKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQ 183

Query: 244 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 303
           TLLFSAT+T  L  L  L+ N+ +F+EA     TV+ L Q+Y+ +P+ VKD YL+H++ +
Sbjct: 184 TLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVHLIQR 243

Query: 304 MKDMGVR-SAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPV 363
            +D     S IIF +TCK+C  L ++L +     VALHS   Q ER AAL +FKS    +
Sbjct: 244 FQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSSIYRI 303

Query: 364 LLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 423
           L+ATDVASRGLDIPTV +VIN++ P   P+ Y+HRVGRTARAGR G A++ +TQ D+ L+
Sbjct: 304 LIATDVASRGLDIPTVQVVINHNTP-GLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLV 363

Query: 424 HEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKIL- 483
           H IE  + KKLE F  +E EVL+ +T+V   RR   +K+    F+EK KE  K+K  IL 
Sbjct: 364 HAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEK-KEINKRKQLILE 423

Query: 484 --------AEKGLLKKRSRKRRREKASKE 500
                     K  L K  +K RR K   E
Sbjct: 424 GKDPDLEAKRKAELAKIKQKNRRFKEKVE 448

[Close]

BLAST of CmoCh02G006580 vs. ExPASy Swiss-Prot
Match: Q4FZF3 (Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus OX=10090 GN=Ddx49 PE=2 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 3.3e-105
Identity = 215/440 (48.86%), Postives = 295/440 (67.05%), Query Frame = 0


Query: 64  FADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQ 123
           FA++GLS W+V+ C++L +K+PT VQ  CIP IL G D LG A+TGSGKTAAF LPILQ+
Sbjct: 4   FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63

Query: 124 LSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHI 183
           LSE P+G+F LV+TPTRELAYQ+AEQFR LG  L L+  ++VGGMDM+ Q   L ++PH+
Sbjct: 64  LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123

Query: 184 VIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVG---FEEELKVIFKCLPRNRQ 243
           VIATPGR+   L  +        K +FLV+DEADR+L+ G   F  +L+ I   +P  RQ
Sbjct: 124 VIATPGRLADHLRSSNTFN--MKKIQFLVMDEADRLLEQGCTDFTTDLETILAAVPARRQ 183

Query: 244 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 303
           TLLFSAT+T  L+ L  L+ N+ +F+EA    +TV+ L Q+Y+ +P+ VKD YL+H++  
Sbjct: 184 TLLFSATLTDTLKELQGLATNEPFFWEAQATVRTVEQLDQRYLLVPEKVKDAYLVHLVQT 243

Query: 304 MKD-MGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPV 363
            +D +   S IIF +TCK+C  L ++L + +   VALHS   Q ER AAL +FKS    +
Sbjct: 244 FQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRI 303

Query: 364 LLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 423
           L+ATDVASRGLDIPTV +VIN++ P   P+ Y+HRVGRTARAGR G A++ +TQ D+ L+
Sbjct: 304 LIATDVASRGLDIPTVQVVINHNTP-GLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLL 363

Query: 424 HEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILA 483
           H IE  + ++L     +E EVL+ +T+V   RR   +K+    F+EK KE  K+K  IL 
Sbjct: 364 HAIEEQIKQQLAELVVEEAEVLQILTQVNVVRRECEIKLEASHFDEK-KEINKRKQMILE 423

Query: 484 EKGLLKKRSRKRRREKASKE 500
            K    +  RK    K  ++
Sbjct: 424 GKDPDLEAKRKAELAKIKQQ 439

[Close]

BLAST of CmoCh02G006580 vs. ExPASy Swiss-Prot
Match: Q55BR9 (Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium discoideum OX=44689 GN=ddx49 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 5.0e-101
Identity = 208/439 (47.38%), Postives = 294/439 (66.97%), Query Frame = 0


Query: 63  TFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQ 122
           TF +LGL+ W+V  CK+L  K P+ +Q + IP+IL G D++  A+TGSGKTA+FA+PIL 
Sbjct: 5   TFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILN 64

Query: 123 QLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPH 182
           QLSE P+GVFA+++TPTRELA Q+ EQF A+G+ +N+ CSVV+GG+D + Q   L KRPH
Sbjct: 65  QLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDKRPH 124

Query: 183 IVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCL--PRNRQ 242
           I++ATPGR+   L     I   F   KFLVLDEADR+L   FE E+  I + L  P  RQ
Sbjct: 125 IIVATPGRLASHLNNGLKIALKF--CKFLVLDEADRLLGEDFELEIASILEHLPPPEKRQ 184

Query: 243 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 302
           TLLFSATMTK+L  L  ++ NK + +E    + TVD LKQ+Y+++P   KD YL++I+ K
Sbjct: 185 TLLFSATMTKNLTKLDSIALNKPFIFEDNSKYDTVDTLKQEYIYMPAPTKDCYLVYILKK 244

Query: 303 MKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVL 362
            +     SAI+FV+ C +   +  +L +LD   V+LHSF  Q  RLAAL  FKSG+  VL
Sbjct: 245 HEG---SSAIVFVNNCYAVEAVKGMLNKLDIPSVSLHSFLDQKSRLAALKTFKSGKVKVL 304

Query: 363 LATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 422
           +ATDVASRGLDIP V +VINY +     +DY+HRVGRTAR GR G A+SFIT +DV LI 
Sbjct: 305 VATDVASRGLDIPDVQIVINYKLSN-SSKDYIHRVGRTARFGRSGRAISFITPHDVSLIK 364

Query: 423 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAE 482
            IE  + K+LE+++  ++EV  ++ +   AR++  + + +  F  K KER+ ++ ++  +
Sbjct: 365 GIEEIIKKQLELYKTDDDEVFRHLKEASTARKIVEIHLDEIEFGVKQKERRTERNELQKQ 424

Query: 483 KGLLKKRSRKRRREKASKE 500
              LK+ + K + E  + +
Sbjct: 425 ---LKEVNNKEKFENNNND 434

[Close]

BLAST of CmoCh02G006580 vs. ExPASy TrEMBL
Match: A0A6J1G6B4 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucurbita moschata OX=3662 GN=LOC111451228 PE=3 SV=1)

HSP 1 Score: 957.2 bits (2473), Expect = 2.7e-275
Identity = 502/503 (99.80%), Postives = 502/503 (99.80%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60
           MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60

Query: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120
           NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI
Sbjct: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120

Query: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR
Sbjct: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180

Query: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240
           PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300
           TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300

Query: 301 MKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVL 360
           MKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVL
Sbjct: 301 MKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420
           LATDVASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420

Query: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAE 480
           EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAE
Sbjct: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAE 480

Query: 481 KGLLKKRSRKRRREKASKELGAV 504
           KGLLKKRSRKRRREKASKELGAV
Sbjct: 481 KGLLKKRSRKRRREKASKELGAV 502

[Close]

BLAST of CmoCh02G006580 vs. ExPASy TrEMBL
Match: A0A6J1L281 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucurbita maxima OX=3661 GN=LOC111499736 PE=3 SV=1)

HSP 1 Score: 929.1 bits (2400), Expect = 7.9e-267
Identity = 488/503 (97.02%), Postives = 491/503 (97.61%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60
           MDQEVTVDENFPLFSKSHRKTHKPS KNPT      AVDNTA+KAPIQIEKSTELTTKST
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSLKNPT------AVDNTAQKAPIQIEKSTELTTKST 60

Query: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120
           NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI
Sbjct: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120

Query: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR
Sbjct: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180

Query: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240
           PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300
           TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQY+F+PKNVKDVYLLHIMSK
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYIFLPKNVKDVYLLHIMSK 300

Query: 301 MKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVL 360
           MKDMGVRSAIIFVHTCKSCHHLGLLL ELDQDV ALHSFKSQSERLAALYRFKSGQAPVL
Sbjct: 301 MKDMGVRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLAALYRFKSGQAPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420
           LATDVASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420

Query: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAE 480
           EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFK LAE
Sbjct: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAE 480

Query: 481 KGLLKKRSRKRRREKASKELGAV 504
           KGLLKKRSRKRRREK SKELGAV
Sbjct: 481 KGLLKKRSRKRRREKGSKELGAV 496

[Close]

BLAST of CmoCh02G006580 vs. ExPASy TrEMBL
Match: A0A6J1D9D5 (DEAD-box ATP-dependent RNA helicase 36 OS=Momordica charantia OX=3673 GN=LOC111018118 PE=3 SV=1)

HSP 1 Score: 843.6 bits (2178), Expect = 4.3e-241
Identity = 446/500 (89.20%), Postives = 470/500 (94.00%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60
           MD+EVTVDENFPLF+KSHRK HKPSQ NPT   VS  V+  A K P+Q+EKST+L T ST
Sbjct: 1   MDEEVTVDENFPLFAKSHRKKHKPSQ-NPTGGPVSTIVETIASKKPLQVEKSTDLATTST 60

Query: 61  -NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120
            NVTFADLGLSEWIV+TCKELAM+KPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP
Sbjct: 61  NNVTFADLGLSEWIVRTCKELAMRKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120

Query: 121 ILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLK 180
           ILQ+LSETPFGVFALVVTPTRELAYQLAEQFRALGSSL+LRCSVVVGGMDMLNQ QSLLK
Sbjct: 121 ILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLHLRCSVVVGGMDMLNQAQSLLK 180

Query: 181 RPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNR 240
           RPHIVIATPGRVKVLLEENPDIP VFSKTKFLVLDEADRVLDVGFEEELKVIF+CLPRNR
Sbjct: 181 RPHIVIATPGRVKVLLEENPDIPLVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNR 240

Query: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMS 300
           QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTV+MLKQQYVFIPKNVKDVYLLHI+S
Sbjct: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVEMLKQQYVFIPKNVKDVYLLHILS 300

Query: 301 KMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPV 360
           KM+DMG+RSAIIFV TC+SCH LGLLL ELDQ+V ALHSFKSQS+RLAALYRFKSGQ PV
Sbjct: 301 KMEDMGIRSAIIFVQTCRSCHLLGLLLEELDQEVAALHSFKSQSQRLAALYRFKSGQVPV 360

Query: 361 LLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 420
           LLATDVASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGR GLAVSFITQNDVELI
Sbjct: 361 LLATDVASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRGGLAVSFITQNDVELI 420

Query: 421 HEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILA 480
           HEIEA +GK+LE FECKENEVLEN+TKVYKARRVAAMKMVDDGFEEKVKERKKQK K LA
Sbjct: 421 HEIEAVVGKQLENFECKENEVLENITKVYKARRVAAMKMVDDGFEEKVKERKKQKQKTLA 480

Query: 481 EKGLLKKRSR-KRRREKASK 499
           EKGLLKK+ R K+RREK S+
Sbjct: 481 EKGLLKKKKRSKKRREKTSE 498

[Close]

BLAST of CmoCh02G006580 vs. ExPASy TrEMBL
Match: A0A5D3CBL8 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00060 PE=3 SV=1)

HSP 1 Score: 842.0 bits (2174), Expect = 1.3e-240
Identity = 445/496 (89.72%), Postives = 466/496 (93.95%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60
           MDQEV VD NFPLFSK HRK HKPS+ NPT     AAV+N A K+ +QIEKSTELTTKST
Sbjct: 1   MDQEVIVDANFPLFSKPHRKKHKPSE-NPT-----AAVENIAPKSSLQIEKSTELTTKST 60

Query: 61  -NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120
            NVTF+DLGLSEWIVQTCKEL MKKPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALP
Sbjct: 61  NNVTFSDLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALP 120

Query: 121 ILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLK 180
           ILQ+LSETPFGVFALVVTPTRELAYQLAEQFRALGS LNLRCSVVVGGMDML+QTQSLLK
Sbjct: 121 ILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLK 180

Query: 181 RPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNR 240
           RPHIVIATPGRVKVLLEENPDIP VFSKTKFLVLDEADRVLDVGFEEELKVIF+CLPRNR
Sbjct: 181 RPHIVIATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNR 240

Query: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMS 300
           QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPK+VKD+YLLHI+S
Sbjct: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILS 300

Query: 301 KMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPV 360
           KM+DMG+RSAIIFV TCKSCH LGLLL  LDQ+V ALHSFKSQSERLAALYRFKSGQ PV
Sbjct: 301 KMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPV 360

Query: 361 LLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 420
           LLATDVASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGR GLAVSFITQNDV LI
Sbjct: 361 LLATDVASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRGGLAVSFITQNDVHLI 420

Query: 421 HEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILA 480
           HEIEANLGK+LEIFECKENEVLEN+TKVYKAR VA MKMVDDGFEEKVKERKKQK K LA
Sbjct: 421 HEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDDGFEEKVKERKKQKLKTLA 480

Query: 481 EKGLLKKRSRKRRREK 496
           EKGLLKKR+++RR+EK
Sbjct: 481 EKGLLKKRNKRRRKEK 489

[Close]

BLAST of CmoCh02G006580 vs. ExPASy TrEMBL
Match: A0A1S3C309 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo OX=3656 GN=LOC103496288 PE=3 SV=1)

HSP 1 Score: 842.0 bits (2174), Expect = 1.3e-240
Identity = 445/496 (89.72%), Postives = 466/496 (93.95%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60
           MDQEV VD NFPLFSK HRK HKPS+ NPT     AAV+N A K+ +QIEKSTELTTKST
Sbjct: 1   MDQEVIVDANFPLFSKPHRKKHKPSE-NPT-----AAVENIAPKSSLQIEKSTELTTKST 60

Query: 61  -NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120
            NVTF+DLGLSEWIVQTCKEL MKKPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALP
Sbjct: 61  NNVTFSDLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALP 120

Query: 121 ILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLK 180
           ILQ+LSETPFGVFALVVTPTRELAYQLAEQFRALGS LNLRCSVVVGGMDML+QTQSLLK
Sbjct: 121 ILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLK 180

Query: 181 RPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNR 240
           RPHIVIATPGRVKVLLEENPDIP VFSKTKFLVLDEADRVLDVGFEEELKVIF+CLPRNR
Sbjct: 181 RPHIVIATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNR 240

Query: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMS 300
           QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPK+VKD+YLLHI+S
Sbjct: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILS 300

Query: 301 KMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPV 360
           KM+DMG+RSAIIFV TCKSCH LGLLL  LDQ+V ALHSFKSQSERLAALYRFKSGQ PV
Sbjct: 301 KMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPV 360

Query: 361 LLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 420
           LLATDVASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGR GLAVSFITQNDV LI
Sbjct: 361 LLATDVASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRGGLAVSFITQNDVHLI 420

Query: 421 HEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILA 480
           HEIEANLGK+LEIFECKENEVLEN+TKVYKAR VA MKMVDDGFEEKVKERKKQK K LA
Sbjct: 421 HEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDDGFEEKVKERKKQKLKTLA 480

Query: 481 EKGLLKKRSRKRRREK 496
           EKGLLKKR+++RR+EK
Sbjct: 481 EKGLLKKRNKRRRKEK 489

[Close]

BLAST of CmoCh02G006580 vs. NCBI nr
Match: XP_022947338.1 (DEAD-box ATP-dependent RNA helicase 36 [Cucurbita moschata] >XP_022947339.1 DEAD-box ATP-dependent RNA helicase 36 [Cucurbita moschata])

HSP 1 Score: 957.2 bits (2473), Expect = 5.6e-275
Identity = 502/503 (99.80%), Postives = 502/503 (99.80%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60
           MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60

Query: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120
           NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI
Sbjct: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120

Query: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR
Sbjct: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180

Query: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240
           PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300
           TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300

Query: 301 MKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVL 360
           MKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVL
Sbjct: 301 MKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420
           LATDVASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420

Query: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAE 480
           EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAE
Sbjct: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAE 480

Query: 481 KGLLKKRSRKRRREKASKELGAV 504
           KGLLKKRSRKRRREKASKELGAV
Sbjct: 481 KGLLKKRSRKRRREKASKELGAV 502

[Close]

BLAST of CmoCh02G006580 vs. NCBI nr
Match: KAG6605347.1 (DEAD-box ATP-dependent RNA helicase 36, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035305.1 DEAD-box ATP-dependent RNA helicase 36 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 948.0 bits (2449), Expect = 3.4e-272
Identity = 497/503 (98.81%), Postives = 498/503 (99.01%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60
           MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVS +VDNTAEKAPIQIEKSTELTTKST
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSTSVDNTAEKAPIQIEKSTELTTKST 60

Query: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120
           NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI
Sbjct: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120

Query: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR
Sbjct: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180

Query: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240
           PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300
           TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300

Query: 301 MKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVL 360
           MKDMGVRSAIIFVHTCKSCHHLGLLL ELDQDV ALHSFKSQSERLAALYRFKSGQAPVL
Sbjct: 301 MKDMGVRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLAALYRFKSGQAPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420
           LATDVASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420

Query: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAE 480
           EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFK LAE
Sbjct: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAE 480

Query: 481 KGLLKKRSRKRRREKASKELGAV 504
           KGLLKKRSRKRRREKASKELGAV
Sbjct: 481 KGLLKKRSRKRRREKASKELGAV 502

[Close]

BLAST of CmoCh02G006580 vs. NCBI nr
Match: XP_023534745.1 (DEAD-box ATP-dependent RNA helicase 36 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 935.3 bits (2416), Expect = 2.3e-268
Identity = 491/503 (97.61%), Postives = 494/503 (98.21%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60
           MDQEVTVDENFPLFSKSHRKTHKPSQKNPT     AAVDNTAEKAPIQ+EKSTELTTKST
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPT-----AAVDNTAEKAPIQVEKSTELTTKST 60

Query: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120
           NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI
Sbjct: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120

Query: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR
Sbjct: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180

Query: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240
           PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300
           TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300

Query: 301 MKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVL 360
           MKDMG+RSAIIFVHTCKSCHHLGLLL ELDQDV ALHSFKSQSERL+ALYRFKSGQAPVL
Sbjct: 301 MKDMGIRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLSALYRFKSGQAPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420
           LATDVASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420

Query: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAE 480
           EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFK LAE
Sbjct: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAE 480

Query: 481 KGLLKKRSRKRRREKASKELGAV 504
           KGLLKKRSRKRRREKASKELGAV
Sbjct: 481 KGLLKKRSRKRRREKASKELGAV 497

[Close]

BLAST of CmoCh02G006580 vs. NCBI nr
Match: XP_023007160.1 (DEAD-box ATP-dependent RNA helicase 36 [Cucurbita maxima])

HSP 1 Score: 929.1 bits (2400), Expect = 1.6e-266
Identity = 488/503 (97.02%), Postives = 491/503 (97.61%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60
           MDQEVTVDENFPLFSKSHRKTHKPS KNPT      AVDNTA+KAPIQIEKSTELTTKST
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSLKNPT------AVDNTAQKAPIQIEKSTELTTKST 60

Query: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120
           NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI
Sbjct: 61  NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120

Query: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR
Sbjct: 121 LQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKR 180

Query: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240
           PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQ 240

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSK 300
           TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQY+F+PKNVKDVYLLHIMSK
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYIFLPKNVKDVYLLHIMSK 300

Query: 301 MKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVL 360
           MKDMGVRSAIIFVHTCKSCHHLGLLL ELDQDV ALHSFKSQSERLAALYRFKSGQAPVL
Sbjct: 301 MKDMGVRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLAALYRFKSGQAPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420
           LATDVASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRHGLAVSFITQNDVELIH 420

Query: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAE 480
           EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFK LAE
Sbjct: 421 EIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKTLAE 480

Query: 481 KGLLKKRSRKRRREKASKELGAV 504
           KGLLKKRSRKRRREK SKELGAV
Sbjct: 481 KGLLKKRSRKRRREKGSKELGAV 496

[Close]

BLAST of CmoCh02G006580 vs. NCBI nr
Match: XP_038900331.1 (DEAD-box ATP-dependent RNA helicase 36 [Benincasa hispida])

HSP 1 Score: 847.4 bits (2188), Expect = 6.2e-242
Identity = 444/499 (88.98%), Postives = 470/499 (94.19%), Query Frame = 0


Query: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60
           MD+EV +DENFPLFSKSHRK HKPS+ NPT A +S AV+N A K  +QIEKSTEL+TKST
Sbjct: 1   MDREVIIDENFPLFSKSHRKKHKPSE-NPTGAPISPAVENNAPKKSLQIEKSTELSTKST 60

Query: 61  -NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120
            NVTFADLGLSEWIVQTCKEL MKKPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALP
Sbjct: 61  NNVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALP 120

Query: 121 ILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLK 180
           ILQ+LSETPFGVFALVVTPTRELAYQLAEQFRALGS LNLRCSVVVGGMDML+QTQSLLK
Sbjct: 121 ILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLK 180

Query: 181 RPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNR 240
           RPHIVIATPGRVKVLLEENPDIP VFSKTKFLVLDEADRVLDVGFEEELKVIF+CLP +R
Sbjct: 181 RPHIVIATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPHSR 240

Query: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMS 300
           QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPK+VKD+YLLHI+S
Sbjct: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILS 300

Query: 301 KMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPV 360
           KM+DMG+RSAIIFV TCKSCH LGLLL  LDQ+V ALHSFKSQSERLAALYRFKSGQ PV
Sbjct: 301 KMEDMGIRSAIIFVQTCKSCHMLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPV 360

Query: 361 LLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 420
           LLATDVASRGLDIPTVDLVINYDIPR FPRDYVHRVGRTARAGR GLAVSFITQNDV+LI
Sbjct: 361 LLATDVASRGLDIPTVDLVINYDIPR-FPRDYVHRVGRTARAGRGGLAVSFITQNDVQLI 420

Query: 421 HEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILA 480
           HEIEANLGK+LE FECKENEVLEN+TKVYKAR VA MKMVDDGFEEKVKERKKQK K LA
Sbjct: 421 HEIEANLGKQLENFECKENEVLENITKVYKARHVAKMKMVDDGFEEKVKERKKQKLKTLA 480

Query: 481 EKGLLKKRSRKRRREKASK 499
           EKGLLKKR++++R+EK SK
Sbjct: 481 EKGLLKKRNKRKRKEKTSK 497

[Close]

BLAST of CmoCh02G006580 vs. TAIR 10
Match: AT1G16280.1 (RNA helicase 36 )

HSP 1 Score: 606.3 bits (1562), Expect = 2.2e-173
Identity = 318/473 (67.23%), Postives = 386/473 (81.61%), Query Frame = 0


Query: 25  SQKNPTAAAVSAAVDNTAEKAPIQIEKSTEL-----TTKSTNVTFADLGLSEWIVQTCKE 84
           S+KNP       +    +++   Q EK T       TT +TN  F  LGL+EW V+TCKE
Sbjct: 18  SRKNPKTVVNIQSQKLDSDQNTPQFEKFTNPNPSSDTTSATN--FEGLGLAEWAVETCKE 77

Query: 85  LAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLSETPFGVFALVVTPT 144
           L M+KPT VQTHC+PKILAG DVLGLAQTGSGKTAAFALPIL +L+E P+GVFALVVTPT
Sbjct: 78  LGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDPYGVFALVVTPT 137

Query: 145 RELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRVKVLLEENP 204
           RELA+QLAEQF+ALGS LNLRCSV+VGGMDML QT SL+ RPHIVI TPGR+KVLLE NP
Sbjct: 138 RELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNP 197

Query: 205 DIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTLLFSATMTKDLETLLELS 264
           D+P VFS+TKFLVLDEADRVLDVGF++EL+ IF+CLP++RQTLLFSATMT +L+ LLE S
Sbjct: 198 DVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALLEHS 257

Query: 265 ANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMSKMKDMGVRSAIIFVHTCKSC 324
           +NKAYFYEAYEG KTVD L QQ++F  K+ K++YL+HI+S+M+D G+RSA+IFV TC++C
Sbjct: 258 SNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTC 317

Query: 325 HHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVLLATDVASRGLDIPTVDLVI 384
             L L+L EL+ + +A+HS  SQS RL+AL +FKSG+ P+LLATDVASRGLDIPTVDLVI
Sbjct: 318 QRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVI 377

Query: 385 NYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHEIEANLGKKLEIFECKENE 444
           NYDIPR  PRDYVHRVGRTARAGR GLAVS IT+ DV+LIH+IE  +GKK+E +  K   
Sbjct: 378 NYDIPR-DPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEPYNKKVIT 437

Query: 445 VLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQKFKILAEKGLLKKRSRKRR 493
               VTKV KA+RVA MKM+D+GFE+KVK+R+K K K LA+KGLLKKR ++++
Sbjct: 438 DSLEVTKVSKAKRVAMMKMLDNGFEDKVKDRRKLKRKTLADKGLLKKRGKRQK 487

[Close]

BLAST of CmoCh02G006580 vs. TAIR 10
Match: AT5G60990.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 337.0 bits (863), Expect = 2.5e-92
Identity = 199/450 (44.22%), Postives = 282/450 (62.67%), Query Frame = 0


Query: 63  TFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQ 122
           TFA+LG+ E +V+ C+ L  K P+ +Q   +P  L G DV+GLAQTGSGKT AFA+PILQ
Sbjct: 10  TFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQ 69

Query: 123 QLSETPF------------GVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDM 182
            L E  +              FA V++PTRELA Q+AEQF ALG+ ++LRC+V+VGG+D 
Sbjct: 70  ALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDR 129

Query: 183 LNQTQSLLKRPHIVIATPGRVKVLLEENPDIPAVFSKT-KFLVLDEADRVLDVGFEEELK 242
           + QT +L KRPH+++ATPGR   L +   D      K+ K+LVLDEADR+L+  FE+ L 
Sbjct: 130 MQQTIALGKRPHVIVATPGR---LWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLN 189

Query: 243 VIFKCLPRNRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNV 302
            I + +P  R+T LFSATMTK +  L           EA   + TVD LKQQY F+    
Sbjct: 190 QILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAKY 249

Query: 303 KDVYLLHIMSKMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAAL 362
           KD YL++I+S+M +    +++IF  TC     L L+L  L    + +    +QS+RL AL
Sbjct: 250 KDCYLVYILSEMPE---STSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGAL 309

Query: 363 YRFKSGQAPVLLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVS 422
            +FK+G+  +L+ TDVASRGLDIP+VD+VINYDIP    +DY+HRVGRTARAGR G+ +S
Sbjct: 310 NKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPT-NSKDYIHRVGRTARAGRSGVGIS 369

Query: 423 FITQNDVELIHEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKE 482
            + Q ++E   +IE  +GKKL  +  +E+EVL  + +V +A++++AM M + G  ++  E
Sbjct: 370 LVNQYELEWYIQIEKLIGKKLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESGGRKRRGE 429

Query: 483 RKKQKFKILAEKGLLKKRSRKRRREKASKE 500
             ++  + L   G  K R  K R     K+
Sbjct: 430 DDEESERFL---GGNKDRGNKERGGNKDKK 449

[Close]

BLAST of CmoCh02G006580 vs. TAIR 10
Match: AT4G16630.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 248.4 bits (633), Expect = 1.2e-65
Identity = 152/383 (39.69%), Postives = 216/383 (56.40%), Query Frame = 0


Query: 63  TFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQ 122
           TF +L LS  +++ C+ L  KKPT +Q  CIP  L G D+   A TGSGKTAAFALP L+
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227

Query: 123 QLSETPFGVFA---LVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLK 182
           +L   P  VFA   L++TPTRELA Q+    + L    +++C ++VGG+ +  Q   L  
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRS 287

Query: 183 RPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNR 242
            P IV+ATPGR+   L  +  +         L+LDEADR+L  GF  E+  + +  P+ R
Sbjct: 288 MPDIVVATPGRMIDHLRNSMSVD--LDDLAVLILDEADRLLQTGFATEITELVRLCPKRR 347

Query: 243 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMS 302
           QT+LFSATMT++++ L++LS NK     A    +    L ++ V I +  +      ++S
Sbjct: 348 QTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLS 407

Query: 303 KMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPV 362
                     IIF  T ++ H L +L G        LH   +Q++RL +L  F+  +   
Sbjct: 408 LCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDF 467

Query: 363 LLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELI 422
           L+ATDVA+RGLDI  V  VINY  PR     YVHRVGRTARAGR G AV+F+T +D  L+
Sbjct: 468 LIATDVAARGLDIIGVQTVINYACPREID-SYVHRVGRTARAGREGYAVTFVTDSDRSLL 527

Query: 423 HEIEANLGKKLEIFECKENEVLE 443
             I   +G KL+     E  +++
Sbjct: 528 KVIAKKVGSKLKSRVIPEQSIVK 547

[Close]

BLAST of CmoCh02G006580 vs. TAIR 10
Match: AT5G65900.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 223.0 bits (567), Expect = 5.3e-58
Identity = 150/430 (34.88%), Postives = 226/430 (52.56%), Query Frame = 0


Query: 2   DQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKSTN 61
           + EV  +E  P      +K  K  +K+  A +    V++  E      EK  E T+  TN
Sbjct: 106 EDEVIAEEEEP------KKKKKKQRKDTEAKSEEEEVEDKEE------EKKLEETSIMTN 165

Query: 62  VTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPIL 121
            TF  L LS+   ++ KE+   + T +Q   IP ++ G DVLG A+TGSGKT AF +P +
Sbjct: 166 KTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAV 225

Query: 122 QQLSETPF----GVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSL 181
           + L    F    G   LV+ PTRELA Q     + L    +     V+GG     + + L
Sbjct: 226 ELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEIL 285

Query: 182 LKRPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPR 241
            K  ++++ATPGR+   LE       +F   KFLV+DEADR+L+  FEE+LK I   LP+
Sbjct: 286 AKGVNLLVATPGRLLDHLENTNGF--IFKNLKFLVMDEADRILEQNFEEDLKKILNLLPK 345

Query: 242 NRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTV--DMLKQQYVFIPKNVKDVYLL 301
            RQT LFSAT +  +E L  +S     + +  EG K V  + L+Q Y  +P  ++ ++LL
Sbjct: 346 TRQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLL 405

Query: 302 HIMSKMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSG 361
             + + +  G +  ++F  TCKS      L   +  D + +     Q++R     +F   
Sbjct: 406 TFLKRFQ--GKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKA 465

Query: 362 QAPVLLATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARA-GRHGLAVSFITQN 421
           +  +LL T+VA+RGLD P VD ++ YD P   P DY+HRVGRTAR  G  G A+  +T  
Sbjct: 466 ETGILLCTNVAARGLDFPHVDWIVQYDPPD-NPTDYIHRVGRTARGEGAKGKALLVLTPQ 518

Query: 422 DVELIHEIEA 425
           +++ I  ++A
Sbjct: 526 ELKFIQYLKA 518

[Close]

BLAST of CmoCh02G006580 vs. TAIR 10
Match: AT1G20920.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 211.8 bits (538), Expect = 1.2e-54
Identity = 146/443 (32.96%), Postives = 237/443 (53.50%), Query Frame = 0


Query: 68  GLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPILQQLSET 127
           GL+  I+ T K+L  +KP  +QT  +P I++G D +G+A+TGSGKT  F LP+L+ + + 
Sbjct: 535 GLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQ 594

Query: 128 P-----FGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLKRPH 187
           P      G   LV+ PTREL  Q+    R     L +RC  V GG  +  Q   L +   
Sbjct: 595 PPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTE 654

Query: 188 IVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNRQTL 247
           IV+ TPGR+  +L  +        +  FLV+DEADR+ D+GFE ++  I + +   RQT+
Sbjct: 655 IVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTV 714

Query: 248 LFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFI-PKNVKDVYLLHIMSKM 307
           LFSAT  + +ETL     NK    +   G   V+    Q V + P++ + + LL ++ + 
Sbjct: 715 LFSATFPRQVETLARKVLNKPVEIQV-GGRSVVNKDITQLVEVRPESDRFLRLLELLGEW 774

Query: 308 KDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPVLL 367
            + G    ++FV + + C  L   + +     ++LH  K Q++R + +  FK+    +L+
Sbjct: 775 SEKG--KILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLI 834

Query: 368 ATDVASRGLDIPTVDLVINYDIPRWFPRDYVHRVGRTARAGRHGLAVSFITQNDVELIHE 427
           AT VA+RGLD+  ++LV+N+D P  +  DYVHRVGRT RAGR G AV+FI+++D +   +
Sbjct: 835 ATSVAARGLDVKELELVVNFDAPNHY-EDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPD 894

Query: 428 IEANLGKKLEIFECKENEVLENVTKVYKARRVAAMKMVDDGFEEKVKERKKQK------- 487
           +       ++  E  E  V ++            +K + DGF  KVK+  +Q        
Sbjct: 895 L-------VKALELSEQPVPDD------------LKALADGFMVKVKQGIEQAHGTGYGG 954

Query: 488 --FKILAEKGLLKKRSRKRRREK 496
             FK   E+  ++K ++K + ++
Sbjct: 955 SGFKFNEEEEEVRKAAKKAQAKE 954

The following BLAST results are available for this feature:

BLAST of CmoCh02G006580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA27	3.2e-172	67.23	DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana OX=3702 GN=RH36 P...	[more]
Q8L4E9	9.0e-143	54.09	DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9Y6V7	1.2e-107	49.89	Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens OX=9606 GN=DDX49 PE=1 ...	[more]
Q4FZF3	3.3e-105	48.86	Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus OX=10090 GN=Ddx49 PE=2...	[more]
Q55BR9	5.0e-101	47.38	Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium discoideum OX=44689 G...	[more]

BLAST of CmoCh02G006580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6B4	2.7e-275	99.80	DEAD-box ATP-dependent RNA helicase 36 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1L281	7.9e-267	97.02	DEAD-box ATP-dependent RNA helicase 36 OS=Cucurbita maxima OX=3661 GN=LOC1114997...	[more]
A0A6J1D9D5	4.3e-241	89.20	DEAD-box ATP-dependent RNA helicase 36 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A5D3CBL8	1.3e-240	89.72	DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3C309	1.3e-240	89.72	DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo OX=3656 GN=LOC103496288 P...	[more]

BLAST of CmoCh02G006580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947338.1	5.6e-275	99.80	DEAD-box ATP-dependent RNA helicase 36 [Cucurbita moschata] >XP_022947339.1 DEAD...	[more]
KAG6605347.1	3.4e-272	98.81	DEAD-box ATP-dependent RNA helicase 36, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_023534745.1	2.3e-268	97.61	DEAD-box ATP-dependent RNA helicase 36 [Cucurbita pepo subsp. pepo]	[more]
XP_023007160.1	1.6e-266	97.02	DEAD-box ATP-dependent RNA helicase 36 [Cucurbita maxima]	[more]
XP_038900331.1	6.2e-242	88.98	DEAD-box ATP-dependent RNA helicase 36 [Benincasa hispida]	[more]

BLAST of CmoCh02G006580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16280.1	2.2e-173	67.23	RNA helicase 36	[more]
AT5G60990.1	2.5e-92	44.22	DEA(D/H)-box RNA helicase family protein	[more]
AT4G16630.1	1.2e-65	39.69	DEA(D/H)-box RNA helicase family protein	[more]
AT5G65900.1	5.3e-58	34.88	DEA(D/H)-box RNA helicase family protein	[more]
AT1G20920.1	1.2e-54	32.96	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 81..281 e-value: 6.0E-51 score: 185.3
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 93..266 score: 31.106606
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 320..402 e-value: 6.0E-28 score: 108.8
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 306..402 e-value: 4.5E-25 score: 88.1
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 300..441 score: 22.145786
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 21..267 e-value: 2.6E-70 score: 238.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 274..501 e-value: 5.4E-47 score: 162.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 130..422
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 86..255 e-value: 2.1E-43 score: 148.1
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 60..492
None	No IPR available	PANTHER	PTHR24031:SF240	ATP-DEPENDENT RNA HELICASE DDX49-RELATED	coord: 60..492
None	No IPR available	CDD	cd17955	DEADc_DDX49	coord: 64..267 e-value: 1.97138E-120 score: 349.601
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 278..411 e-value: 4.52098E-50 score: 165.758
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 212..220
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 62..90 score: 10.560987

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G006580.1	CmoCh02G006580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009561	megagametogenesis
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005634	nucleus
cellular_component	GO:0090406	pollen tube
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003724	RNA helicase activity