CmoCh02G006520 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G006520
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	psbP domain-containing protein 2, chloroplastic isoform X1
Location	Cmo_Chr02: 4068920 .. 4073018 (-)
RNA-Seq Expression	CmoCh02G006520
Synteny	CmoCh02G006520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTCTATCCAGACCATACGCACAGAGGTAGAGTTCGAAGAGAAAGCAGCGCGGAAGTGGAACCAATCGTCTTGGGCTATGGCGACACTCCTCCAGTTTCCATCCAACATACTCTTCTTCCATGTATGCTCCATTTTCAATCTCTTAGCTTCATATTTATCGACAATGTTCATGATTCTTCGTGTTTTCTAATCTCTACTAGTGGCGATGTCCTTTGAATTGTCTTGATTAGCGCTTATGATGTAATTGATGTATTCTCGGCTGGATTTCAATGCACACGATTATCGAATTGGACATTGAATCATTAGTAGAAATCAAGAAAATGGTCTTTGTATGGACAACATTCTCCGTTCAGAGATTTGTTCTGTAAATACAGACTTTTGGATGCAAGAATTGCAAAATCGACTTGAACATGTATCCTATAAAATCCATTGCAGCATCTTTTCACTGATGTAGTGTAATATAAAAATCGTGGTGGAAGGCAAAGAAATCCCCTCTAATTTTCACTACATTGTTAAAACTTGTTGGCCCAATGTATGATATAACATGTTTAACATTTTTATGTGAAGTTCATGGCTGAAGTTGGTGAATTGAGTTAAATTCTTTTATTATGCTATAGTCAACCGAAAGTCCTAAGTCATGTTTTGTGAGATCCCACATCGGTTGGAGAGGAAAACGAAACATTTTTTATAAGGGTGTGGAAACCTCTGCTTAGCAAATGCGTTTCAAACCTTAAGGGGAAGCCCGAATGGGAAAGCCCAAAAAGGATAATATCTGCTAGCGGTGGGCTTAGATTGTTACATGTTTGTTGTGTAGTATACCTCTTCGTTCGAATTCATTATTGAGTTTTCTAGCAATTTTCTTTGTCTTTTTATCCCCTATGTTCATAACCTCTTCATCCCCAACCCATTCCCTTCCTCCCCAACTAACTTTTGTTATTTATAATGTGTAGACTCTCCAAACCCAAAGGGAAGGTACTTGGAAACATCTTGTGAGGCAAGCATGCTTTTATTTAATTGGGGGTTTTTCTTGTATTTTTCCCGAATGTTTTAAATTTAACTATATGAAGTATCAAATGAGTGATTAATAATGTTTTATTGTGTACTGTGATGAATAGATATTGTTCAATCCAGACAAAGTTGGCCTGTAGATGCGAAAGGAGGACGGCTGATTTCTTTTTATTGCTCCTCAATGAATTTTCAGGCACCATATAAATTTTCAAACGGTTCCTCGTCAAAACAAAAGCTTCCTACAAGGTTTTTGAGGGATAAGAAGTTGATTTTTGATGCAGATCCCCCTGCCCAAAAGGACATTGATCATTCATACCATATTTTGGAACAAAGGTTCAATTACATACTTCCTATGGACATTTCATTAAATTTTCCATTTTTAAGAGATCATTTTTGCTTCAATATGAAGTTATCTGTTTTATTAATTTTTCGGTCCATGCTGGATAGGTAGAACATGATATGAACTGCATATAGACTTCAAATTATGATTCTTTTTCTTTTTTATTTATTTAGGATTTGATGTCGTCTTTAATGTTTTTCAATTATCCTTTTAGGACATATTAAGCAAGAGTATTTTTGTCATTTTTCCATGATCAATAATATGTCATTTTGGTTCGTTGGAAGGTCATCTAGAGCCTGACCGTTTGATTTTTCGAACAGTTGACCATGAATAAATTTTAGCTGATATTTTTTTTGTCAAGTTTAGCTAAGAGTTTCTTGATCCTTTTGCAATTCATGACTTGAGTTACTTGCAAAAAAAATATTCAAATAAGATTGATCATCCTATCGTGGACCAAAGAACTTGAGGCAATCCGTGTTTAACCTAAAGTTTAGAGTTTAAATTGATAGATTTGAGGGTTTTGTGTTTGTGAACTCGGGGTTCACATACACAAGGGGTTAACTTGAAACTTCCATATATGGCTATGGTGAAGAAAAGAAAAATCTTTGTACATGGTATGTTACAGTTCAAAGATTCCATTGGGTATGCTGCAGCTATAGTTTTCTAGTGGATTGTTGGTCTCGGCAACAGTTTTGTTGTCTTTCCATTATGTTTTTATTTATTTATAATGAGTGAATTCTCCTTTATTCTTCCCACTGTGTGAAACTAGCTGTTCTTTTATCTTTTTGTTTTCGCATATCGATGTTTTCATCATTCAAACTCTTTTTGTTCAATAAAAATCTAGCCCACGTTTTCTGTTTAAGAAAAAATCACATTCTCTTCACCATGAATCTAATTCTCAATTTTGCAGCACAGTGCTCATGTGACCCAAAAACACATACTAGGAAGCAGCCACTCGTGCACAAGTCCTCTCCTTTACCCAAGCAGGAGAGCTCTGAATGTTTCTGTTATCTCATTGTTCTTGTATGGATTTTCACCAAGCATTTGTGAGGCCGTTTTTGCTGAAGAGTTGGAGCTTGAGAGATACACAGATTCAAAGGAGGGTTTTACTCTTCTTCGACCATCTTCTTGGGTTAAGGTATTTGGCCATCTCTCTCTGAACTAACGGTGATGCATTCTTAGGCTCTTCCTTTGAGTAGACTTTGTCTGAAACTGTGTGCTTGGTAAAGGTTGATAAAGCAGGGGCAACAGTTTTATTTGAAGAGGAGAATAAAGGAAGCAACAATGTTGGTGTTGTAGTAAATCCGGTTCGTCTTACAAGTCTTGGGGAGTTTGGAACTCCTCAGTTCGTGGCTGACAAACTTATACAGGCTGAAAAGCGAAAGGTAATTTATTTTTTGAGATTTTGGCATTTCCTACTGATTGGAACATAGACTTGCTTGGCTGTGATTTTTGTTGGATGCTTTTAAGTGCTAGGAAAAATAATATATTTGAGTGTTTTCTTTTTTCTTTGGGATAATATAACATTCGAGTTTAACTAGTATGACAGTCTTTTTGATTCGTGATCTTTTTTCTGTTGGATTGTATGTTTTGCCCCGTAAGAATGTACTCTGTCGCACTGCTGCTTCAGATACTAAATTTGTAATCTATGTGTAACGGCCCAAACCCACCGCTAGCAGATATTATCCTTTTTGGGTTTTCCCTTTCAGCCTTTCCCTCAAAGTCTTTAAAATATGTCTGCTAGGAAGAGATTTCTACACCCTTATAAAAAATGTTTCATTCTCCTCTCCAACCGATGTGGGATCTCACAATACACCCCCCTTCGGAGCCCAGCTTCCTCGCTGACACTCGTTCCCTTCTCCAATCGATGTGGGACTCCCAATCCACCCTCCTTCGAGGCCCAACGTCCTTTCTAGCACACGGCCTCGTGTTTGCCCTTCTTTGGGGCTCAGTCTCCTCGTTGGCACATCGCTCAGTGTCTGACTCTGATACCATTTGTAATAGCCCAAGCCCACCGCTAGTAGATATTGTCCTACTTGGGCTTTCCCTCAAGGTTTTTAAAACGTGTCTGCTAGGAAGAGGTTTCCACACCCTTATGAAAAATGTTTCGTTCTCCTCCTCAACCGAGATGGGATATCACATACCGTTGGACTAGCCTTGTTGCATCCAAGTTATTAACTCTTCTATTTCTTGATTCATGTTCTTTTACCCCTAAAATGGAAGGAACACTATTGTTATCCAAATCCAACATTCTAAAATGGGATTAACCGACTCCATGTCTTAGTTACTTATTCTATGAATACAGGAAAGTACAAAGGATGCAGCAGTGGTTGGTGCTGCAGAGAGATCTGGTAAGGGAGGTCTACAAGTATACGAGTTCGAGTACATGGTCGACAGCACTAGAGGGGGGATGAAGCGGGTTTTCTCCGCTGCTTTTGTGGCTTCTAAGAAGCTTTACATCCTTAACGTATCCCACTCGGACAAACCAGAGAGCCCTCTTGATTCACAGAGAAGAAAGATGTTGGAGCAGGTTCTTCATTCCTTTGATGCAGCTCCTTCCTCCTGAAAGATCATCATCAGTTCATGCTCTCCCTCCAAACTAACTCATTTCCATTCTGTCTCTGCTTTGCTTTCCATGCCACCATGGGGCTTCCATTTTTCTCTCTAATTAATATATATAAAGTTTGTTTCTTCCTATTCTTTTCCCACCTTCTATAAGTTTCAGTTCTTCCTCATCGTTTACTTGTTGG

mRNA sequence

AGTCTATCCAGACCATACGCACAGAGGTAGAGTTCGAAGAGAAAGCAGCGCGGAAGTGGAACCAATCGTCTTGGGCTATGGCGACACTCCTCCAGTTTCCATCCAACATACTCTTCTTCCATACTCTCCAAACCCAAAGGGAAGATATTGTTCAATCCAGACAAAGTTGGCCTGTAGATGCGAAAGGAGGACGGCTGATTTCTTTTTATTGCTCCTCAATGAATTTTCAGGCACCATATAAATTTTCAAACGGTTCCTCGTCAAAACAAAAGCTTCCTACAAGGTTTTTGAGGGATAAGAAGTTGATTTTTGATGCAGATCCCCCTGCCCAAAAGGACATTGATCATTCATACCATATTTTGGAACAAAGTGCTCATGTGACCCAAAAACACATACTAGGAAGCAGCCACTCGTGCACAAGTCCTCTCCTTTACCCAAGCAGGAGAGCTCTGAATGTTTCTGTTATCTCATTGTTCTTGTATGGATTTTCACCAAGCATTTGTGAGGCCGTTTTTGCTGAAGAGTTGGAGCTTGAGAGATACACAGATTCAAAGGAGGGTTTTACTCTTCTTCGACCATCTTCTTGGGTTAAGGTTGATAAAGCAGGGGCAACAGTTTTATTTGAAGAGGAGAATAAAGGAAGCAACAATGTTGGTGTTGTAGTAAATCCGGTTCGTCTTACAAGTCTTGGGGAGTTTGGAACTCCTCAGTTCGTGGCTGACAAACTTATACAGGCTGAAAAGCGAAAGGAAAGTACAAAGGATGCAGCAGTGGTTGGTGCTGCAGAGAGATCTGGTAAGGGAGGTCTACAAGTATACGAGTTCGAGTACATGGTCGACAGCACTAGAGGGGGGATGAAGCGGGTTTTCTCCGCTGCTTTTGTGGCTTCTAAGAAGCTTTACATCCTTAACGTATCCCACTCGGACAAACCAGAGAGCCCTCTTGATTCACAGAGAAGAAAGATGTTGGAGCAGGTTCTTCATTCCTTTGATGCAGCTCCTTCCTCCTGAAAGATCATCATCAGTTCATGCTCTCCCTCCAAACTAACTCATTTCCATTCTGTCTCTGCTTTGCTTTCCATGCCACCATGGGGCTTCCATTTTTCTCTCTAATTAATATATATAAAGTTTGTTTCTTCCTATTCTTTTCCCACCTTCTATAAGTTTCAGTTCTTCCTCATCGTTTACTTGTTGG

Coding sequence (CDS)

ATGGCGACACTCCTCCAGTTTCCATCCAACATACTCTTCTTCCATACTCTCCAAACCCAAAGGGAAGATATTGTTCAATCCAGACAAAGTTGGCCTGTAGATGCGAAAGGAGGACGGCTGATTTCTTTTTATTGCTCCTCAATGAATTTTCAGGCACCATATAAATTTTCAAACGGTTCCTCGTCAAAACAAAAGCTTCCTACAAGGTTTTTGAGGGATAAGAAGTTGATTTTTGATGCAGATCCCCCTGCCCAAAAGGACATTGATCATTCATACCATATTTTGGAACAAAGTGCTCATGTGACCCAAAAACACATACTAGGAAGCAGCCACTCGTGCACAAGTCCTCTCCTTTACCCAAGCAGGAGAGCTCTGAATGTTTCTGTTATCTCATTGTTCTTGTATGGATTTTCACCAAGCATTTGTGAGGCCGTTTTTGCTGAAGAGTTGGAGCTTGAGAGATACACAGATTCAAAGGAGGGTTTTACTCTTCTTCGACCATCTTCTTGGGTTAAGGTTGATAAAGCAGGGGCAACAGTTTTATTTGAAGAGGAGAATAAAGGAAGCAACAATGTTGGTGTTGTAGTAAATCCGGTTCGTCTTACAAGTCTTGGGGAGTTTGGAACTCCTCAGTTCGTGGCTGACAAACTTATACAGGCTGAAAAGCGAAAGGAAAGTACAAAGGATGCAGCAGTGGTTGGTGCTGCAGAGAGATCTGGTAAGGGAGGTCTACAAGTATACGAGTTCGAGTACATGGTCGACAGCACTAGAGGGGGGATGAAGCGGGTTTTCTCCGCTGCTTTTGTGGCTTCTAAGAAGCTTTACATCCTTAACGTATCCCACTCGGACAAACCAGAGAGCCCTCTTGATTCACAGAGAAGAAAGATGTTGGAGCAGGTTCTTCATTCCTTTGATGCAGCTCCTTCCTCCTGA

Protein sequence

MATLLQFPSNILFFHTLQTQREDIVQSRQSWPVDAKGGRLISFYCSSMNFQAPYKFSNGSSSKQKLPTRFLRDKKLIFDADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSPLLYPSRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATVLFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGAAERSGKGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYILNVSHSDKPESPLDSQRRKMLEQVLHSFDAAPSS

Homology

[Close]

BLAST of CmoCh02G006520 vs. ExPASy Swiss-Prot
Match: Q8VY52 (PsbP domain-containing protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD2 PE=1 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.1e-62
Identity = 129/211 (61.14%), Postives = 156/211 (73.93%), Query Frame = 0


Query: 98  SAHVTQKHILGSSHSCTSPLLYPSRRALNVSVISLFLYGFSPSICEAVFAEELELERYTD 157
           S H   K    + +  ++  +  S+R LN+S+++LF  GF   + +       EL+RYTD
Sbjct: 24  SHHKIHKFFCFAQNPSSTVSINLSKRHLNLSILTLFFNGF---LLDNKAKSMEELQRYTD 83

Query: 158 SKEGFTLLRPSSWVKVDKAGATVLFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKL 217
           S  GFTLL PSS+ KV+KAGA  LFEE N GSNN+GVVV+PVR+ SL +FG+PQFVADKL
Sbjct: 84  SNNGFTLLIPSSYTKVEKAGANALFEELNNGSNNIGVVVSPVRIKSLDQFGSPQFVADKL 143

Query: 218 IQAEKRKESTKDAAVVGAAERSGKGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYIL 277
           I AEKRKESTK+A VV   ER+G  G QVYEFEY +DSTRGG+KRVFSAAFV+S KLY+L
Sbjct: 144 INAEKRKESTKEAEVVSVGERAGL-GQQVYEFEYKIDSTRGGIKRVFSAAFVSSNKLYLL 203

Query: 278 NVSHSDKPESPLDSQRRKMLEQVLHSFDAAP 309
           NV HSDKPE+PLDS  R  LEQVLHSFDA P
Sbjct: 204 NVVHSDKPENPLDSSTRMSLEQVLHSFDALP 230

[Close]

BLAST of CmoCh02G006520 vs. ExPASy Swiss-Prot
Match: Q94AQ6 (NAD-dependent protein deacylase SRT2 OS=Arabidopsis thaliana OX=3702 GN=SRT2 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.3e-06
Identity = 33/98 (33.67%), Postives = 46/98 (46.94%), Query Frame = 0


Query: 23  DIVQSRQSWPVDAKGGRLISFYCSSMNF---QAPYKFSNGS-SSKQKLPTRFLRDKKLIF 82
           D+  SR  +     GG L+  +     F           GS  ++ K P RFLRD+K++ 
Sbjct: 13  DLFPSRSMYRPLQSGGNLVMLFKGCRRFVRTTCRVSIPGGSLGNESKAPPRFLRDRKIVP 72

Query: 83  DADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSP 117
           DADPP  +DI   Y + EQS+ +T     G S  C  P
Sbjct: 73  DADPPNMEDIHKLYRLFEQSSRLTILTGAGVSTECGIP 110

[Close]

BLAST of CmoCh02G006520 vs. ExPASy Swiss-Prot
Match: Q40407 (Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus OX=39639 GN=PSBP PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.5e-04
Identity = 53/213 (24.88%), Postives = 84/213 (39.44%), Query Frame = 0


Query: 121 SRRALNVSVISLFLYGFSPSICEAVFAEELEL--------ERYTDSKEGFTLLRPSSW-- 180
           SRR     +I     G   S  +A + E   +        +  T + +GF +L PS W  
Sbjct: 56  SRRLALTILIGGAALGSRVSAADAAYGESANVFGKPKTNTDFQTVTGDGFKILIPSKWNP 115

Query: 181 -VKVDKAGATVLFEEENKGSNNVGVVVNPVRLTSLGEFGTP-QFVAD------------K 240
             +V+  G  + +E+    ++NVGV+VNP    S+ ++G+P QF++             K
Sbjct: 116 SKEVEFPGQVLRYEDNFDTTSNVGVMVNPTDKKSIKDYGSPEQFLSQVDYLLGKQAYFGK 175

Query: 241 LIQAEKRKESTKDAAVVGAAERSGKGGLQVYEFEYMVDSTRG--GMKRVFSAAFVASKKL 300
            I     + +    A +        GG   Y    +  +  G  G K +   A V+  KL
Sbjct: 176 TISEGGFEPNAVRTANILETSTPVVGGKDYYSIHVLTRTADGDEGGKHLLITATVSDGKL 235

Query: 301 YILNVSHSDKPESPLDSQRRKMLEQVLHSFDAA 308
           YI      DK         +K +E    SF AA
Sbjct: 236 YICKAQAGDK---RWFKGAKKFVESAASSFSAA 265

[Close]

BLAST of CmoCh02G006520 vs. ExPASy TrEMBL
Match: A0A6J1G5H4 (psbP domain-containing protein 2, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451028 PE=4 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 1.0e-171
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0


Query: 1   MATLLQFPSNILFFHTLQTQREDIVQSRQSWPVDAKGGRLISFYCSSMNFQAPYKFSNGS 60
           MATLLQFPSNILFFHTLQTQREDIVQSRQSWPVDAKGGRLISFYCSSMNFQAPYKFSNGS
Sbjct: 1   MATLLQFPSNILFFHTLQTQREDIVQSRQSWPVDAKGGRLISFYCSSMNFQAPYKFSNGS 60

Query: 61  SSKQKLPTRFLRDKKLIFDADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSPLLYP 120
           SSKQKLPTRFLRDKKLIFDADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSPLLYP
Sbjct: 61  SSKQKLPTRFLRDKKLIFDADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSPLLYP 120

Query: 121 SRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV 180
           SRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV
Sbjct: 121 SRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV 180

Query: 181 LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGAAERSG 240
           LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGAAERSG
Sbjct: 181 LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGAAERSG 240

Query: 241 KGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYILNVSHSDKPESPLDSQRRKMLEQV 300
           KGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYILNVSHSDKPESPLDSQRRKMLEQV
Sbjct: 241 KGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYILNVSHSDKPESPLDSQRRKMLEQV 300

Query: 301 LHSFDAAPSS 311
           LHSFDAAPSS
Sbjct: 301 LHSFDAAPSS 310

[Close]

BLAST of CmoCh02G006520 vs. ExPASy TrEMBL
Match: A0A6J1L4C6 (psbP domain-containing protein 2, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499772 PE=4 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 1.1e-165
Identity = 299/310 (96.45%), Postives = 304/310 (98.06%), Query Frame = 0


Query: 1   MATLLQFPSNILFFHTLQTQREDIVQSRQSWPVDAKGGRLISFYCSSMNFQAPYKFSNGS 60
           MATLLQFPSNILFFHTLQT+REDIVQSRQSWPVDAKGGRLISFYCS MNFQAPYKFSNGS
Sbjct: 1   MATLLQFPSNILFFHTLQTRREDIVQSRQSWPVDAKGGRLISFYCSKMNFQAPYKFSNGS 60

Query: 61  SSKQKLPTRFLRDKKLIFDADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSPLLYP 120
           SSKQKLPTRFLRDKKL FDADPPA KDIDHSYHILEQSAHVTQK ILGSSH CTSPLLYP
Sbjct: 61  SSKQKLPTRFLRDKKLAFDADPPALKDIDHSYHILEQSAHVTQKPILGSSHLCTSPLLYP 120

Query: 121 SRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV 180
           SRRALNVS+ISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV
Sbjct: 121 SRRALNVSIISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV 180

Query: 181 LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGAAERSG 240
           LFEEENKGSNNVGVVVNPVRLTSLGEFG+PQFVADKLIQAEKRKESTKDAAVVGAAERSG
Sbjct: 181 LFEEENKGSNNVGVVVNPVRLTSLGEFGSPQFVADKLIQAEKRKESTKDAAVVGAAERSG 240

Query: 241 KGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYILNVSHSDKPESPLDSQRRKMLEQV 300
           +GGLQVYEFEY VDSTRGGMKRVFSAAFVASKKLYILN+SHSDKPESPLDSQRRKMLEQV
Sbjct: 241 EGGLQVYEFEYTVDSTRGGMKRVFSAAFVASKKLYILNISHSDKPESPLDSQRRKMLEQV 300

Query: 301 LHSFDAAPSS 311
           LHSFDAAPSS
Sbjct: 301 LHSFDAAPSS 310

[Close]

BLAST of CmoCh02G006520 vs. ExPASy TrEMBL
Match: A0A6J1G5L4 (psbP domain-containing protein 2, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451028 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 4.0e-144
Identity = 274/310 (88.39%), Postives = 274/310 (88.39%), Query Frame = 0


Query: 1   MATLLQFPSNILFFHTLQTQREDIVQSRQSWPVDAKGGRLISFYCSSMNFQAPYKFSNGS 60
           MATLLQFPSNILFFH                                    APYKFSNGS
Sbjct: 1   MATLLQFPSNILFFH------------------------------------APYKFSNGS 60

Query: 61  SSKQKLPTRFLRDKKLIFDADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSPLLYP 120
           SSKQKLPTRFLRDKKLIFDADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSPLLYP
Sbjct: 61  SSKQKLPTRFLRDKKLIFDADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSPLLYP 120

Query: 121 SRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV 180
           SRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV
Sbjct: 121 SRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV 180

Query: 181 LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGAAERSG 240
           LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGAAERSG
Sbjct: 181 LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGAAERSG 240

Query: 241 KGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYILNVSHSDKPESPLDSQRRKMLEQV 300
           KGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYILNVSHSDKPESPLDSQRRKMLEQV
Sbjct: 241 KGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYILNVSHSDKPESPLDSQRRKMLEQV 274

Query: 301 LHSFDAAPSS 311
           LHSFDAAPSS
Sbjct: 301 LHSFDAAPSS 274

[Close]

BLAST of CmoCh02G006520 vs. ExPASy TrEMBL
Match: A0A6J1G5P1 (psbP domain-containing protein 2, chloroplastic isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111451028 PE=4 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 3.4e-143
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 48  MNFQAPYKFSNGSSSKQKLPTRFLRDKKLIFDADPPAQKDIDHSYHILEQSAHVTQKHIL 107
           MNFQAPYKFSNGSSSKQKLPTRFLRDKKLIFDADPPAQKDIDHSYHILEQSAHVTQKHIL
Sbjct: 1   MNFQAPYKFSNGSSSKQKLPTRFLRDKKLIFDADPPAQKDIDHSYHILEQSAHVTQKHIL 60

Query: 108 GSSHSCTSPLLYPSRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRP 167
           GSSHSCTSPLLYPSRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRP
Sbjct: 61  GSSHSCTSPLLYPSRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRP 120

Query: 168 SSWVKVDKAGATVLFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKEST 227
           SSWVKVDKAGATVLFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKEST
Sbjct: 121 SSWVKVDKAGATVLFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKEST 180

Query: 228 KDAAVVGAAERSGKGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYILNVSHSDKPES 287
           KDAAVVGAAERSGKGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYILNVSHSDKPES
Sbjct: 181 KDAAVVGAAERSGKGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYILNVSHSDKPES 240

Query: 288 PLDSQRRKMLEQVLHSFDAAPSS 311
           PLDSQRRKMLEQVLHSFDAAPSS
Sbjct: 241 PLDSQRRKMLEQVLHSFDAAPSS 263

[Close]

BLAST of CmoCh02G006520 vs. ExPASy TrEMBL
Match: A0A6J1L2D6 (psbP domain-containing protein 2, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499772 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 5.0e-139
Identity = 265/310 (85.48%), Postives = 269/310 (86.77%), Query Frame = 0


Query: 1   MATLLQFPSNILFFHTLQTQREDIVQSRQSWPVDAKGGRLISFYCSSMNFQAPYKFSNGS 60
           MATLLQFPSNILFFH                                    APYKFSNGS
Sbjct: 1   MATLLQFPSNILFFH------------------------------------APYKFSNGS 60

Query: 61  SSKQKLPTRFLRDKKLIFDADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSPLLYP 120
           SSKQKLPTRFLRDKKL FDADPPA KDIDHSYHILEQSAHVTQK ILGSSH CTSPLLYP
Sbjct: 61  SSKQKLPTRFLRDKKLAFDADPPALKDIDHSYHILEQSAHVTQKPILGSSHLCTSPLLYP 120

Query: 121 SRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV 180
           SRRALNVS+ISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV
Sbjct: 121 SRRALNVSIISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV 180

Query: 181 LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGAAERSG 240
           LFEEENKGSNNVGVVVNPVRLTSLGEFG+PQFVADKLIQAEKRKESTKDAAVVGAAERSG
Sbjct: 181 LFEEENKGSNNVGVVVNPVRLTSLGEFGSPQFVADKLIQAEKRKESTKDAAVVGAAERSG 240

Query: 241 KGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYILNVSHSDKPESPLDSQRRKMLEQV 300
           +GGLQVYEFEY VDSTRGGMKRVFSAAFVASKKLYILN+SHSDKPESPLDSQRRKMLEQV
Sbjct: 241 EGGLQVYEFEYTVDSTRGGMKRVFSAAFVASKKLYILNISHSDKPESPLDSQRRKMLEQV 274

Query: 301 LHSFDAAPSS 311
           LHSFDAAPSS
Sbjct: 301 LHSFDAAPSS 274

[Close]

BLAST of CmoCh02G006520 vs. NCBI nr
Match: XP_022947028.1 (psbP domain-containing protein 2, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 612.5 bits (1578), Expect = 2.1e-171
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0


Query: 1   MATLLQFPSNILFFHTLQTQREDIVQSRQSWPVDAKGGRLISFYCSSMNFQAPYKFSNGS 60
           MATLLQFPSNILFFHTLQTQREDIVQSRQSWPVDAKGGRLISFYCSSMNFQAPYKFSNGS
Sbjct: 1   MATLLQFPSNILFFHTLQTQREDIVQSRQSWPVDAKGGRLISFYCSSMNFQAPYKFSNGS 60

Query: 61  SSKQKLPTRFLRDKKLIFDADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSPLLYP 120
           SSKQKLPTRFLRDKKLIFDADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSPLLYP
Sbjct: 61  SSKQKLPTRFLRDKKLIFDADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSPLLYP 120

Query: 121 SRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV 180
           SRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV
Sbjct: 121 SRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV 180

Query: 181 LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGAAERSG 240
           LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGAAERSG
Sbjct: 181 LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGAAERSG 240

Query: 241 KGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYILNVSHSDKPESPLDSQRRKMLEQV 300
           KGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYILNVSHSDKPESPLDSQRRKMLEQV
Sbjct: 241 KGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYILNVSHSDKPESPLDSQRRKMLEQV 300

Query: 301 LHSFDAAPSS 311
           LHSFDAAPSS
Sbjct: 301 LHSFDAAPSS 310

[Close]

BLAST of CmoCh02G006520 vs. NCBI nr
Match: XP_023532578.1 (psbP domain-containing protein 2, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 602.8 bits (1553), Expect = 1.6e-168
Identity = 304/310 (98.06%), Postives = 307/310 (99.03%), Query Frame = 0


Query: 1   MATLLQFPSNILFFHTLQTQREDIVQSRQSWPVDAKGGRLISFYCSSMNFQAPYKFSNGS 60
           MATLLQFPSNILFFHTLQTQREDIVQSRQSWPVDAKGGRLISFYCSSMNFQAPYKFSNGS
Sbjct: 1   MATLLQFPSNILFFHTLQTQREDIVQSRQSWPVDAKGGRLISFYCSSMNFQAPYKFSNGS 60

Query: 61  SSKQKLPTRFLRDKKLIFDADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSPLLYP 120
           SSKQKLPTRFLRDKKL FDADPPAQKDIDHSYHILEQSAHVTQKHILGSSH CTSP+LYP
Sbjct: 61  SSKQKLPTRFLRDKKLAFDADPPAQKDIDHSYHILEQSAHVTQKHILGSSHLCTSPVLYP 120

Query: 121 SRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV 180
           SRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV
Sbjct: 121 SRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV 180

Query: 181 LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGAAERSG 240
           LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGAAERSG
Sbjct: 181 LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGAAERSG 240

Query: 241 KGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYILNVSHSDKPESPLDSQRRKMLEQV 300
           KGGLQVYEFEY VDSTRGGMKRVFSAAFVASKKLYILN+SHSDKPESPLDSQRRKMLE+V
Sbjct: 241 KGGLQVYEFEYTVDSTRGGMKRVFSAAFVASKKLYILNISHSDKPESPLDSQRRKMLEKV 300

Query: 301 LHSFDAAPSS 311
           LHSFDAAPSS
Sbjct: 301 LHSFDAAPSS 310

[Close]

BLAST of CmoCh02G006520 vs. NCBI nr
Match: XP_023532577.1 (psbP domain-containing protein 2, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 595.1 bits (1533), Expect = 3.4e-166
Identity = 304/319 (95.30%), Postives = 307/319 (96.24%), Query Frame = 0


Query: 1   MATLLQFPSNILFFH---------TLQTQREDIVQSRQSWPVDAKGGRLISFYCSSMNFQ 60
           MATLLQFPSNILFFH         TLQTQREDIVQSRQSWPVDAKGGRLISFYCSSMNFQ
Sbjct: 1   MATLLQFPSNILFFHVCSIFSTSQTLQTQREDIVQSRQSWPVDAKGGRLISFYCSSMNFQ 60

Query: 61  APYKFSNGSSSKQKLPTRFLRDKKLIFDADPPAQKDIDHSYHILEQSAHVTQKHILGSSH 120
           APYKFSNGSSSKQKLPTRFLRDKKL FDADPPAQKDIDHSYHILEQSAHVTQKHILGSSH
Sbjct: 61  APYKFSNGSSSKQKLPTRFLRDKKLAFDADPPAQKDIDHSYHILEQSAHVTQKHILGSSH 120

Query: 121 SCTSPLLYPSRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWV 180
            CTSP+LYPSRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWV
Sbjct: 121 LCTSPVLYPSRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWV 180

Query: 181 KVDKAGATVLFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAA 240
           KVDKAGATVLFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAA
Sbjct: 181 KVDKAGATVLFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAA 240

Query: 241 VVGAAERSGKGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYILNVSHSDKPESPLDS 300
           VVGAAERSGKGGLQVYEFEY VDSTRGGMKRVFSAAFVASKKLYILN+SHSDKPESPLDS
Sbjct: 241 VVGAAERSGKGGLQVYEFEYTVDSTRGGMKRVFSAAFVASKKLYILNISHSDKPESPLDS 300

Query: 301 QRRKMLEQVLHSFDAAPSS 311
           QRRKMLE+VLHSFDAAPSS
Sbjct: 301 QRRKMLEKVLHSFDAAPSS 319

[Close]

BLAST of CmoCh02G006520 vs. NCBI nr
Match: KAG6605340.1 (PsbP domain-containing protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 593.6 bits (1529), Expect = 1.0e-165
Identity = 299/310 (96.45%), Postives = 305/310 (98.39%), Query Frame = 0


Query: 1   MATLLQFPSNILFFHTLQTQREDIVQSRQSWPVDAKGGRLISFYCSSMNFQAPYKFSNGS 60
           MAT +QFPSNILFFHTLQTQREDIVQSRQSWPVDAKGGRLISFYC SMNFQAP+KFSNGS
Sbjct: 1   MATPIQFPSNILFFHTLQTQREDIVQSRQSWPVDAKGGRLISFYCYSMNFQAPHKFSNGS 60

Query: 61  SSKQKLPTRFLRDKKLIFDADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSPLLYP 120
           SSKQKLPTRFLRDKKL+FDADPPAQKDIDHSYHILEQSA+VTQKHI GSSH CTSPLLYP
Sbjct: 61  SSKQKLPTRFLRDKKLVFDADPPAQKDIDHSYHILEQSANVTQKHIRGSSHWCTSPLLYP 120

Query: 121 SRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV 180
           SRRALNVS+ISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV
Sbjct: 121 SRRALNVSIISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV 180

Query: 181 LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGAAERSG 240
           LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGAAERSG
Sbjct: 181 LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGAAERSG 240

Query: 241 KGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYILNVSHSDKPESPLDSQRRKMLEQV 300
           KGGLQVYEFEY VDSTRGGMKRVFSAAFVASKKLYILN+SHSDKPESPLDSQRRKMLEQV
Sbjct: 241 KGGLQVYEFEYTVDSTRGGMKRVFSAAFVASKKLYILNISHSDKPESPLDSQRRKMLEQV 300

Query: 301 LHSFDAAPSS 311
           LHSFDAAPSS
Sbjct: 301 LHSFDAAPSS 310

[Close]

BLAST of CmoCh02G006520 vs. NCBI nr
Match: XP_023007219.1 (psbP domain-containing protein 2, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 592.4 bits (1526), Expect = 2.2e-165
Identity = 299/310 (96.45%), Postives = 304/310 (98.06%), Query Frame = 0


Query: 1   MATLLQFPSNILFFHTLQTQREDIVQSRQSWPVDAKGGRLISFYCSSMNFQAPYKFSNGS 60
           MATLLQFPSNILFFHTLQT+REDIVQSRQSWPVDAKGGRLISFYCS MNFQAPYKFSNGS
Sbjct: 1   MATLLQFPSNILFFHTLQTRREDIVQSRQSWPVDAKGGRLISFYCSKMNFQAPYKFSNGS 60

Query: 61  SSKQKLPTRFLRDKKLIFDADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSPLLYP 120
           SSKQKLPTRFLRDKKL FDADPPA KDIDHSYHILEQSAHVTQK ILGSSH CTSPLLYP
Sbjct: 61  SSKQKLPTRFLRDKKLAFDADPPALKDIDHSYHILEQSAHVTQKPILGSSHLCTSPLLYP 120

Query: 121 SRRALNVSVISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV 180
           SRRALNVS+ISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV
Sbjct: 121 SRRALNVSIISLFLYGFSPSICEAVFAEELELERYTDSKEGFTLLRPSSWVKVDKAGATV 180

Query: 181 LFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEKRKESTKDAAVVGAAERSG 240
           LFEEENKGSNNVGVVVNPVRLTSLGEFG+PQFVADKLIQAEKRKESTKDAAVVGAAERSG
Sbjct: 181 LFEEENKGSNNVGVVVNPVRLTSLGEFGSPQFVADKLIQAEKRKESTKDAAVVGAAERSG 240

Query: 241 KGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYILNVSHSDKPESPLDSQRRKMLEQV 300
           +GGLQVYEFEY VDSTRGGMKRVFSAAFVASKKLYILN+SHSDKPESPLDSQRRKMLEQV
Sbjct: 241 EGGLQVYEFEYTVDSTRGGMKRVFSAAFVASKKLYILNISHSDKPESPLDSQRRKMLEQV 300

Query: 301 LHSFDAAPSS 311
           LHSFDAAPSS
Sbjct: 301 LHSFDAAPSS 310

[Close]

BLAST of CmoCh02G006520 vs. TAIR 10
Match: AT2G28605.1 (Photosystem II reaction center PsbP family protein )

HSP 1 Score: 240.7 bits (613), Expect = 1.5e-63
Identity = 129/211 (61.14%), Postives = 156/211 (73.93%), Query Frame = 0


Query: 98  SAHVTQKHILGSSHSCTSPLLYPSRRALNVSVISLFLYGFSPSICEAVFAEELELERYTD 157
           S H   K    + +  ++  +  S+R LN+S+++LF  GF   + +       EL+RYTD
Sbjct: 24  SHHKIHKFFCFAQNPSSTVSINLSKRHLNLSILTLFFNGF---LLDNKAKSMEELQRYTD 83

Query: 158 SKEGFTLLRPSSWVKVDKAGATVLFEEENKGSNNVGVVVNPVRLTSLGEFGTPQFVADKL 217
           S  GFTLL PSS+ KV+KAGA  LFEE N GSNN+GVVV+PVR+ SL +FG+PQFVADKL
Sbjct: 84  SNNGFTLLIPSSYTKVEKAGANALFEELNNGSNNIGVVVSPVRIKSLDQFGSPQFVADKL 143

Query: 218 IQAEKRKESTKDAAVVGAAERSGKGGLQVYEFEYMVDSTRGGMKRVFSAAFVASKKLYIL 277
           I AEKRKESTK+A VV   ER+G  G QVYEFEY +DSTRGG+KRVFSAAFV+S KLY+L
Sbjct: 144 INAEKRKESTKEAEVVSVGERAGL-GQQVYEFEYKIDSTRGGIKRVFSAAFVSSNKLYLL 203

Query: 278 NVSHSDKPESPLDSQRRKMLEQVLHSFDAAP 309
           NV HSDKPE+PLDS  R  LEQVLHSFDA P
Sbjct: 204 NVVHSDKPENPLDSSTRMSLEQVLHSFDALP 230

[Close]

BLAST of CmoCh02G006520 vs. TAIR 10
Match: AT5G09230.2 (sirtuin 2 )

HSP 1 Score: 52.8 bits (125), Expect = 5.9e-07
Identity = 33/98 (33.67%), Postives = 46/98 (46.94%), Query Frame = 0


Query: 23  DIVQSRQSWPVDAKGGRLISFYCSSMNF---QAPYKFSNGS-SSKQKLPTRFLRDKKLIF 82
           D+  SR  +     GG L+  +     F           GS  ++ K P RFLRD+K++ 
Sbjct: 13  DLFPSRSMYRPLQSGGNLVMLFKGCRRFVRTTCRVSIPGGSLGNESKAPPRFLRDRKIVP 72

Query: 83  DADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSP 117
           DADPP  +DI   Y + EQS+ +T     G S  C  P
Sbjct: 73  DADPPNMEDIHKLYRLFEQSSRLTILTGAGVSTECGIP 110

[Close]

BLAST of CmoCh02G006520 vs. TAIR 10
Match: AT5G09230.1 (sirtuin 2 )

HSP 1 Score: 52.8 bits (125), Expect = 5.9e-07
Identity = 33/98 (33.67%), Postives = 46/98 (46.94%), Query Frame = 0


Query: 23  DIVQSRQSWPVDAKGGRLISFYCSSMNF---QAPYKFSNGS-SSKQKLPTRFLRDKKLIF 82
           D+  SR  +     GG L+  +     F           GS  ++ K P RFLRD+K++ 
Sbjct: 13  DLFPSRSMYRPLQSGGNLVMLFKGCRRFVRTTCRVSIPGGSLGNESKAPPRFLRDRKIVP 72

Query: 83  DADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSP 117
           DADPP  +DI   Y + EQS+ +T     G S  C  P
Sbjct: 73  DADPPNMEDIHKLYRLFEQSSRLTILTGAGVSTECGIP 110

[Close]

BLAST of CmoCh02G006520 vs. TAIR 10
Match: AT5G09230.3 (sirtuin 2 )

HSP 1 Score: 52.8 bits (125), Expect = 5.9e-07
Identity = 33/98 (33.67%), Postives = 46/98 (46.94%), Query Frame = 0


Query: 23  DIVQSRQSWPVDAKGGRLISFYCSSMNF---QAPYKFSNGS-SSKQKLPTRFLRDKKLIF 82
           D+  SR  +     GG L+  +     F           GS  ++ K P RFLRD+K++ 
Sbjct: 13  DLFPSRSMYRPLQSGGNLVMLFKGCRRFVRTTCRVSIPGGSLGNESKAPPRFLRDRKIVP 72

Query: 83  DADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSP 117
           DADPP  +DI   Y + EQS+ +T     G S  C  P
Sbjct: 73  DADPPNMEDIHKLYRLFEQSSRLTILTGAGVSTECGIP 110

[Close]

BLAST of CmoCh02G006520 vs. TAIR 10
Match: AT5G09230.7 (sirtuin 2 )

HSP 1 Score: 52.8 bits (125), Expect = 5.9e-07
Identity = 33/98 (33.67%), Postives = 46/98 (46.94%), Query Frame = 0


Query: 23  DIVQSRQSWPVDAKGGRLISFYCSSMNF---QAPYKFSNGS-SSKQKLPTRFLRDKKLIF 82
           D+  SR  +     GG L+  +     F           GS  ++ K P RFLRD+K++ 
Sbjct: 16  DLFPSRSMYRPLQSGGNLVMLFKGCRRFVRTTCRVSIPGGSLGNESKAPPRFLRDRKIVP 75

Query: 83  DADPPAQKDIDHSYHILEQSAHVTQKHILGSSHSCTSP 117
           DADPP  +DI   Y + EQS+ +T     G S  C  P
Sbjct: 76  DADPPNMEDIHKLYRLFEQSSRLTILTGAGVSTECGIP 113

The following BLAST results are available for this feature:

BLAST of CmoCh02G006520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VY52	2.1e-62	61.14	PsbP domain-containing protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q94AQ6	8.3e-06	33.67	NAD-dependent protein deacylase SRT2 OS=Arabidopsis thaliana OX=3702 GN=SRT2 PE=...	[more]
Q40407	3.5e-04	24.88	Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus O...	[more]

BLAST of CmoCh02G006520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G5H4	1.0e-171	100.00	psbP domain-containing protein 2, chloroplastic isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1L4C6	1.1e-165	96.45	psbP domain-containing protein 2, chloroplastic isoform X1 OS=Cucurbita maxima O...	[more]
A0A6J1G5L4	4.0e-144	88.39	psbP domain-containing protein 2, chloroplastic isoform X2 OS=Cucurbita moschata...	[more]
A0A6J1G5P1	3.4e-143	100.00	psbP domain-containing protein 2, chloroplastic isoform X3 OS=Cucurbita moschata...	[more]
A0A6J1L2D6	5.0e-139	85.48	psbP domain-containing protein 2, chloroplastic isoform X2 OS=Cucurbita maxima O...	[more]

BLAST of CmoCh02G006520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947028.1	2.1e-171	100.00	psbP domain-containing protein 2, chloroplastic isoform X1 [Cucurbita moschata]	[more]
XP_023532578.1	1.6e-168	98.06	psbP domain-containing protein 2, chloroplastic isoform X2 [Cucurbita pepo subsp...	[more]
XP_023532577.1	3.4e-166	95.30	psbP domain-containing protein 2, chloroplastic isoform X1 [Cucurbita pepo subsp...	[more]
KAG6605340.1	1.0e-165	96.45	PsbP domain-containing protein 2, chloroplastic, partial [Cucurbita argyrosperma...	[more]
XP_023007219.1	2.2e-165	96.45	psbP domain-containing protein 2, chloroplastic isoform X1 [Cucurbita maxima]	[more]

BLAST of CmoCh02G006520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28605.1	1.5e-63	61.14	Photosystem II reaction center PsbP family protein	[more]
AT5G09230.2	5.9e-07	33.67	sirtuin 2	[more]
AT5G09230.1	5.9e-07	33.67	sirtuin 2	[more]
AT5G09230.3	5.9e-07	33.67	sirtuin 2	[more]
AT5G09230.7	5.9e-07	33.67	sirtuin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 152..305 e-value: 1.5E-34 score: 119.4
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 142..305 e-value: 2.5E-43 score: 149.9
None	No IPR available	PANTHER	PTHR31407:SF3	PSBP DOMAIN-CONTAINING PROTEIN 2, CHLOROPLASTIC	coord: 99..307
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 99..307
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 153..306

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G006520.1	CmoCh02G006520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding