CmoCh02G005890 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGAGGGCAGAACGAGGAAAGGCGTCTGCTCCGCAGAGCCAAATCCGCTGCCAATCGTTTCTCAAACCTTCAATTCCACTCTATATTTAACATTATACAACTTCAACTTCCCTTGATCGCCAATACACTTCCCTTTTGCTTCACCTTTTCAATTACCAATGCTAATTCCCAGATTTCGAACTTCCCTAATTCTTAAAAATTCGTTCATTAGGTCAACTTTGGCCGCTACTCATGTCGCCTCTTTCCACTCCACGCCAGCCTATTGCGATAAGTGGAAGAGTAAATGGAAATTCGTGAGTTAATTTTTCTTTTTGTTCTGGTTTTTGTTTTATTTTCTGTTTGAATTGCCCTATTTTCATCATTTTCCTGTTTGTTCATATCATTTTGTTTATGAATATTCAATGTTGGTCATTGTTGTCTTCTCTGAATGCTTCTTGACTTGCAAAGACTTTAAGGTTATTTGCTGTTGATTAGTTGATTGAGTTGCAGAAAAGCTATTCTGGCTTTATCCGGCAGCATTCTACATGGCAAGCAACAGTTGTTGAGAGAGAGCTAATGATATTAGGACCTAAATTTACAAAACTATATATAGAAGCAAAGCTATTAGTTTACATTATCCCGGATGAATTTGATTGCCTAGTTATAGTTGGGCTTGAAACTCTGTGGATGAACCTGTTAGCTATGTGTGTTGCTTTTTGCAAGCTAAAGAGTTCATGTGTGAGCATATCAATAGAATTTTGATAGTTTAATCTTGTCGCTGAAATGCTGATGTTGGAATTTTTAGGTGGTGAGTTGATTCGCAATTGATCTTGTTAGCATCTTTGTATCAGGAATTCATTTGATAAGTGTAGGACATAGATATTATCACAGGATAGTTTATTTTTATTGTTTTAATGCAAGATATAATGATCTACCATTAGAGCTGGAGACAGATTATAAAAATGATTGTTTTTAATCTATGATCTCCTTTACTCTCCTTGGCATGAAGTATATAAGTACCCTATAAATACCATTTTCAACTATGGTTTTCCTTGCTTTGCTATCTAAATTTTACATATGTTTCAAAGAACCAGACCCATGTTTTGAAAACTAAAAAAAAATTGTTTTTGGAGTTTGGCTAAGAATTCAAATGTTTTCTTTTGAAAGATGAAACTCATATACACAATTTTCAAAAACCAAAAATTAAAACTCAATTGGTTGTCAAACGAGTTGTGATATTGAGTTAATTGGTACAGTTGTTCGTTAAGAAGTGTAAACATTTCTATTTGGGATGTATTTTTAGGCCCAAGACATAAAAAGCATGAAGTATCACTCGATGAATCCTATATGCGAGTTAGCTCAGACATTCAGGGATATTAAAAGAAAAAAACGTCACTCTATGTGTGTTGGGTATTTCTCTGGCTGTGTCGTGTCATGTGAATTGCTTTTTTTTTTTTTCTTTTACTTTTTGCTTAATAAGATGCTAGTGCATTGTTCAGTCGTAATTTAAAATGGAATGTTTTAGTCGAGTTATGTTCTGGTAAAATTAAACATAATCATTCAAGAGAACCAAGAAGAGGATCATCAGTCTACAATCTAGCAAGGCTTTCATTTACATTTGATCATAAGAAATGAAATAAATCTACTTTATCTATGATCATTTGCACCACTGAATGCATAATACTTTCTGAAGTTATAACTTCTTTAAAAAGAAATTCCTTTTCTATACTTTGGCAGGATGATGGTGTGAGTGGAAAGGAGCCGTCAAAGGTATGTTGATCTATTAGGTGACTATTTTTTCTTTGTTCTTAGATTATAAATGCAAGATTGATGTCATTGAGCCAGATGGAGTTTATCTTTTTGATTGGTTCAGCATTTTGAATATCTTGCATGTCTATCCCATTGCATAATTGCATTAGATGTTATTGCTTACATTTATTGAATGATACCCGAATTAGTCATTTATTATTTATTTTAATGATTCTAATGTTGAAAATGATGATACCAGAATTATGTAAGATATGTGACTCGCCAAAGGCGTGCCGATGCAAAAAAGGCTCTAAAGGACCTCCTCTACAACAGTGGATCTACCTTTCAGGTATTCATTCTTATGTACACTTGCAAAAATTAGAATTTAAGTTGGATAATTATTATCATGATGTTTCGTGAGGGGCTCACCAGCTTTGTATTCAGAGTTAACGTATACTACAGCATCTTGGGAAGATAGTACATTAGAGGAATCGAATTGATCACTTCTTTCTTTCAATGCATAATAATCAAATGAATAGAGCTGATGCCATAGAATGTGTTGGATGCCATCTATTTGACGCAGGGGTTGAATGAGTTCTTCCCTGGGTAGGAGGTCGGGAGTTGGATGTTTGAAAATACCTTCCAAGATCCCACATTTAAGTCCTTTGGTTGAAACCATAATAACTGAACATTCTTGTCCTCTCTGAGAGTTAGCCTTGGGTTAGACAAAGCCTTCCTAAAGATTAGTACGGGTGGATATGAGCATGATGCAATGAGTGGAGCTCTTATATTCTTGTTATGTACATAACTTTTAAATCTAAGGAACAACAAAACACATAGGCCCATGACTATATATTTTTATTTGGTTCATGCCTTATTCAATAGAACAAGGAATCAAAATGGAGTCTTGGTGATCGCTGGTCTTCTGATGAGTCATTCGATCAACCGGGCAGCTGTGATAAGAAAGGACGAGCAAAGTCATCTACGCGAAATTTTGGGAAATCCCAGCACAAGAGATCAAAACGTCAGTTCGCATTGCCTACTGTTATTTCATTTTCATTATATATGTTATTTCCTTTTGATAAATTTCACGGGGATGCGAATGTGTGATTTTGAACACACTGTATTTTTCTTCAGGTAAGTTTAGAAGAGAGAGTTTCGTTAATGACTTCGACAATGATCCGGAGACAATCTTTCACGCCACATTTGGCAATAGATCATATACATGGTCCTTTGACACACGTAAGGATTCCTTTCAAAATTCAGCATCTGGTTTTGAGTGGACAGAGTCTCCTCCTAACTGGAAGAACCAAAGAGGTACTGAATGGGAGAATTCAAGTGATTGTGAGTCTGATGAGGAGACCGCTGATGTAGGATCATGTTCAGATAGAACTATTCTGGGGTTACCAAAGACAGGTCCTTTAAAGATTGAAGAAGTTAAAGCAGCGTAAGTTGATTAGTCTTTCCACTCGATTCAACTCGAACCCACTTATTATTTGTTCATCTTACAGTCATCCCCATCCTCTTGCAGGTTCCGCTCGTCTGCTTTAAAATGGCATCCTGATAAGCATCAGAGATCTTCCAAGGTGAGTTTGGAATAATATTTTCAGTCTGAACAAAGCTAATGAGTTACCCATTTGATTGACCGTAGTTTGGGTTGCGTGGTTTCAGGCAATGGCTGAAGAGAAATTCAAACTCTGTGTTAATGCATACAAATCCCTGTGCTGCGCACTCTCTCCAGGTTAAGCTGCTGCAGGTGTGTTCTAACTTGTAACAATTCGAAATGATTTAAGGTTTTTGAAATATAATTTATGTAGAGAGGGTTATAAATATAGTCTCTATAATTCGATTCAAAATCCGCTCCCTCTTAGTTTGATGGAAAGAGGAGTGGAAGGAATAATGGATGCATTTTTGTAGTAAGAAGGTAATTCCTTCCTTCTTCCTTTGTCACCTATAGAGCACTGATCCATTGCATTCGTTGAGGATACTCCAACTCTTG CCGAGGGCAGAACGAGGAAAGGCGTCTGCTCCGCAGAGCCAAATCCGCTGCCAATCGTTTCTCAAACCTTCAATTCCACTCTATATTTAACATTATACAACTTCAACTTCCCTTGATCGCCAATACACTTCCCTTTTGCTTCACCTTTTCAATTACCAATGCTAATTCCCAGATTTCGAACTTCCCTAATTCTTAAAAATTCGTTCATTAGGTCAACTTTGGCCGCTACTCATGTCGCCTCTTTCCACTCCACGCCAGCCTATTGCGATAAGTGGAAGAGTAAATGGAAATTCGATGATGGTGTGAGTGGAAAGGAGCCGTCAAAGAATTATGTAAGATATGTGACTCGCCAAAGGCGTGCCGATGCAAAAAAGGCTCTAAAGGACCTCCTCTACAACAGTGGATCTACCTTTCAGAACAAGGAATCAAAATGGAGTCTTGGTGATCGCTGGTCTTCTGATGAGTCATTCGATCAACCGGGCAGCTGTGATAAGAAAGGACGAGCAAAGTCATCTACGCGAAATTTTGGGAAATCCCAGCACAAGAGATCAAAACGTAAGTTTAGAAGAGAGAGTTTCGTTAATGACTTCGACAATGATCCGGAGACAATCTTTCACGCCACATTTGGCAATAGATCATATACATGGTCCTTTGACACACGTAAGGATTCCTTTCAAAATTCAGCATCTGGTTTTGAGTGGACAGAGTCTCCTCCTAACTGGAAGAACCAAAGAGGTACTGAATGGGAGAATTCAAGTGATTGTGAGTCTGATGAGGAGACCGCTGATGTAGGATCATGTTCAGATAGAACTATTCTGGGGTTACCAAAGACAGGTCCTTTAAAGATTGAAGAAGTTAAAGCAGCGTTCCGCTCGTCTGCTTTAAAATGGCATCCTGATAAGCATCAGAGATCTTCCAAGGCAATGGCTGAAGAGAAATTCAAACTCTGTGTTAATGCATACAAATCCCTGTGCTGCGCACTCTCTCCAGGTTAAGCTGCTGCAGGTGTGTTCTAACTTGTAACAATTCGAAATGATTTAAGGTTTTTGAAATATAATTTATGTAGAGAGGGTTATAAATATAGTCTCTATAATTCGATTCAAAATCCGCTCCCTCTTAGTTTGATGGAAAGAGGAGTGGAAGGAATAATGGATGCATTTTTGTAGTAAGAAGGTAATTCCTTCCTTCTTCCTTTGTCACCTATAGAGCACTGATCCATTGCATTCGTTGAGGATACTCCAACTCTTG ATGCTAATTCCCAGATTTCGAACTTCCCTAATTCTTAAAAATTCGTTCATTAGGTCAACTTTGGCCGCTACTCATGTCGCCTCTTTCCACTCCACGCCAGCCTATTGCGATAAGTGGAAGAGTAAATGGAAATTCGATGATGGTGTGAGTGGAAAGGAGCCGTCAAAGAATTATGTAAGATATGTGACTCGCCAAAGGCGTGCCGATGCAAAAAAGGCTCTAAAGGACCTCCTCTACAACAGTGGATCTACCTTTCAGAACAAGGAATCAAAATGGAGTCTTGGTGATCGCTGGTCTTCTGATGAGTCATTCGATCAACCGGGCAGCTGTGATAAGAAAGGACGAGCAAAGTCATCTACGCGAAATTTTGGGAAATCCCAGCACAAGAGATCAAAACGTAAGTTTAGAAGAGAGAGTTTCGTTAATGACTTCGACAATGATCCGGAGACAATCTTTCACGCCACATTTGGCAATAGATCATATACATGGTCCTTTGACACACGTAAGGATTCCTTTCAAAATTCAGCATCTGGTTTTGAGTGGACAGAGTCTCCTCCTAACTGGAAGAACCAAAGAGGTACTGAATGGGAGAATTCAAGTGATTGTGAGTCTGATGAGGAGACCGCTGATGTAGGATCATGTTCAGATAGAACTATTCTGGGGTTACCAAAGACAGGTCCTTTAAAGATTGAAGAAGTTAAAGCAGCGTTCCGCTCGTCTGCTTTAAAATGGCATCCTGATAAGCATCAGAGATCTTCCAAGGCAATGGCTGAAGAGAAATTCAAACTCTGTGTTAATGCATACAAATCCCTGTGCTGCGCACTCTCTCCAGGTTAA MLIPRFRTSLILKNSFIRSTLAATHVASFHSTPAYCDKWKSKWKFDDGVSGKEPSKNYVRYVTRQRRADAKKALKDLLYNSGSTFQNKESKWSLGDRWSSDESFDQPGSCDKKGRAKSSTRNFGKSQHKRSKRKFRRESFVNDFDNDPETIFHATFGNRSYTWSFDTRKDSFQNSASGFEWTESPPNWKNQRGTEWENSSDCESDEETADVGSCSDRTILGLPKTGPLKIEEVKAAFRSSALKWHPDKHQRSSKAMAEEKFKLCVNAYKSLCCALSPG Homology
BLAST of CmoCh02G005890 vs. ExPASy Swiss-Prot
Match: A1TLH8 (Chaperone protein DnaJ OS=Acidovorax citrulli (strain AAC00-1) OX=397945 GN=dnaJ PE=3 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 5.3e-04 Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0
BLAST of CmoCh02G005890 vs. ExPASy Swiss-Prot
Match: A1WAR7 (Chaperone protein DnaJ OS=Acidovorax sp. (strain JS42) OX=232721 GN=dnaJ PE=3 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 5.3e-04 Identity = 23/53 (43.40%), Postives = 34/53 (64.15%), Query Frame = 0
BLAST of CmoCh02G005890 vs. ExPASy Swiss-Prot
Match: B9MDJ8 (Chaperone protein DnaJ OS=Acidovorax ebreus (strain TPSY) OX=535289 GN=dnaJ PE=3 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 9.1e-04 Identity = 23/53 (43.40%), Postives = 34/53 (64.15%), Query Frame = 0
BLAST of CmoCh02G005890 vs. ExPASy TrEMBL
Match: A0A6J1G8G0 (uncharacterized protein LOC111451811 OS=Cucurbita moschata OX=3662 GN=LOC111451811 PE=4 SV=1) HSP 1 Score: 563.5 bits (1451), Expect = 4.8e-157 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of CmoCh02G005890 vs. ExPASy TrEMBL
Match: A0A6J1KY84 (uncharacterized protein LOC111499819 OS=Cucurbita maxima OX=3661 GN=LOC111499819 PE=4 SV=1) HSP 1 Score: 524.6 bits (1350), Expect = 2.5e-145 Identity = 263/278 (94.60%), Postives = 264/278 (94.96%), Query Frame = 0
BLAST of CmoCh02G005890 vs. ExPASy TrEMBL
Match: A0A6J1E0U6 (uncharacterized protein LOC111024907 OS=Momordica charantia OX=3673 GN=LOC111024907 PE=4 SV=1) HSP 1 Score: 445.7 bits (1145), Expect = 1.5e-121 Identity = 223/278 (80.22%), Postives = 243/278 (87.41%), Query Frame = 0
BLAST of CmoCh02G005890 vs. ExPASy TrEMBL
Match: A0A0A0LMX8 (J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G301500 PE=4 SV=1) HSP 1 Score: 416.0 bits (1068), Expect = 1.2e-112 Identity = 215/279 (77.06%), Postives = 236/279 (84.59%), Query Frame = 0
BLAST of CmoCh02G005890 vs. ExPASy TrEMBL
Match: A0A1S3CDI7 (uncharacterized protein LOC103499655 OS=Cucumis melo OX=3656 GN=LOC103499655 PE=4 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 1.7e-106 Identity = 209/280 (74.64%), Postives = 226/280 (80.71%), Query Frame = 0
BLAST of CmoCh02G005890 vs. NCBI nr
Match: XP_022948146.1 (uncharacterized protein LOC111451811 [Cucurbita moschata]) HSP 1 Score: 563.5 bits (1451), Expect = 9.9e-157 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of CmoCh02G005890 vs. NCBI nr
Match: KAG7035233.1 (hypothetical protein SDJN02_02028 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 555.4 bits (1430), Expect = 2.7e-154 Identity = 275/278 (98.92%), Postives = 276/278 (99.28%), Query Frame = 0
BLAST of CmoCh02G005890 vs. NCBI nr
Match: XP_023534701.1 (uncharacterized protein LOC111796190 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 554.3 bits (1427), Expect = 6.0e-154 Identity = 275/278 (98.92%), Postives = 275/278 (98.92%), Query Frame = 0
BLAST of CmoCh02G005890 vs. NCBI nr
Match: XP_023007277.1 (uncharacterized protein LOC111499819 [Cucurbita maxima]) HSP 1 Score: 524.6 bits (1350), Expect = 5.1e-145 Identity = 263/278 (94.60%), Postives = 264/278 (94.96%), Query Frame = 0
BLAST of CmoCh02G005890 vs. NCBI nr
Match: KAG6605274.1 (hypothetical protein SDJN03_02591, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 493.8 bits (1270), Expect = 9.6e-136 Identity = 251/277 (90.61%), Postives = 251/277 (90.61%), Query Frame = 0
BLAST of CmoCh02G005890 vs. TAIR 10
Match: AT2G18465.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 131.0 bits (328), Expect = 1.5e-30 Identity = 103/284 (36.27%), Postives = 150/284 (52.82%), Query Frame = 0
BLAST of CmoCh02G005890 vs. TAIR 10
Match: AT2G42080.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 86.7 bits (213), Expect = 3.3e-17 Identity = 82/269 (30.48%), Postives = 117/269 (43.49%), Query Frame = 0
BLAST of CmoCh02G005890 vs. TAIR 10
Match: AT3G58020.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 76.3 bits (186), Expect = 4.5e-14 Identity = 81/259 (31.27%), Postives = 115/259 (44.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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