CmoCh02G005850 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G005850
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor HEC2-like
Location	Cmo_Chr02: 3473200 .. 3473835 (-)
RNA-Seq Expression	CmoCh02G005850
Synteny	CmoCh02G005850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGACATCGACATCCTCAAATCGACACTATCACCTTCCAACTCCATCGACATGTCGTCCACAATCCTCCTCAACAACAACAACAGCTCCCACTACCCTCCACTCCCCTTCTTCTCCGACTTCTCATCTCCCTCCTTCCACACCGCACAGCCAGTGCTGCCGAACCAACAGAACCGGCAGAAGCGCGGCGGCGGCGGGGGCGGGGGCGGGGGCGGGGGCGGGGGAATGGCAGCAATGAGAGAGATGATATTCCGAATAGCAGCAATGCAGCCAATACAAATAGACCCAGAGGAGATAAAGGCGCCAAAGCGGCGAAACGTGAGAATCTCGAAGGACCCACAGAGCGTGGCGGCGCGGCAGCGGAGGGAGAGAATCAGCCAGAAGATTAGGATTCTGCAGCGGCTGGTGCCTGGGGGAACTAAGATGGACACGGCGTCGATGCTGGATGAGGCGGTTCATTATGTGAAGTTCTTGAAGAGGCAAGTGCAAACGCTGGAGCAGGCAGGGTTTCACAATGCTAATACTACTAATAATAATAACAACTGTCCTAACCTTAGCTACTCTTCTGCGCTTTTCAAAGCTTGCCAAATGCCCCACGCTCCATCTATGCCTGGCTCTTTGCAAATGCATTGA

mRNA sequence

ATGGACGACATCGACATCCTCAAATCGACACTATCACCTTCCAACTCCATCGACATGTCGTCCACAATCCTCCTCAACAACAACAACAGCTCCCACTACCCTCCACTCCCCTTCTTCTCCGACTTCTCATCTCCCTCCTTCCACACCGCACAGCCAGTGCTGCCGAACCAACAGAACCGGCAGAAGCGCGGCGGCGGCGGGGGCGGGGGCGGGGGCGGGGGCGGGGGAATGGCAGCAATGAGAGAGATGATATTCCGAATAGCAGCAATGCAGCCAATACAAATAGACCCAGAGGAGATAAAGGCGCCAAAGCGGCGAAACGTGAGAATCTCGAAGGACCCACAGAGCGTGGCGGCGCGGCAGCGGAGGGAGAGAATCAGCCAGAAGATTAGGATTCTGCAGCGGCTGGTGCCTGGGGGAACTAAGATGGACACGGCGTCGATGCTGGATGAGGCGGTTCATTATGTGAAGTTCTTGAAGAGGCAAGTGCAAACGCTGGAGCAGGCAGGGTTTCACAATGCTAATACTACTAATAATAATAACAACTGTCCTAACCTTAGCTACTCTTCTGCGCTTTTCAAAGCTTGCCAAATGCCCCACGCTCCATCTATGCCTGGCTCTTTGCAAATGCATTGA

Coding sequence (CDS)

ATGGACGACATCGACATCCTCAAATCGACACTATCACCTTCCAACTCCATCGACATGTCGTCCACAATCCTCCTCAACAACAACAACAGCTCCCACTACCCTCCACTCCCCTTCTTCTCCGACTTCTCATCTCCCTCCTTCCACACCGCACAGCCAGTGCTGCCGAACCAACAGAACCGGCAGAAGCGCGGCGGCGGCGGGGGCGGGGGCGGGGGCGGGGGCGGGGGAATGGCAGCAATGAGAGAGATGATATTCCGAATAGCAGCAATGCAGCCAATACAAATAGACCCAGAGGAGATAAAGGCGCCAAAGCGGCGAAACGTGAGAATCTCGAAGGACCCACAGAGCGTGGCGGCGCGGCAGCGGAGGGAGAGAATCAGCCAGAAGATTAGGATTCTGCAGCGGCTGGTGCCTGGGGGAACTAAGATGGACACGGCGTCGATGCTGGATGAGGCGGTTCATTATGTGAAGTTCTTGAAGAGGCAAGTGCAAACGCTGGAGCAGGCAGGGTTTCACAATGCTAATACTACTAATAATAATAACAACTGTCCTAACCTTAGCTACTCTTCTGCGCTTTTCAAAGCTTGCCAAATGCCCCACGCTCCATCTATGCCTGGCTCTTTGCAAATGCATTGA

Protein sequence

MDDIDILKSTLSPSNSIDMSSTILLNNNNSSHYPPLPFFSDFSSPSFHTAQPVLPNQQNRQKRGGGGGGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNNNNCPNLSYSSALFKACQMPHAPSMPGSLQMH

Homology

[Close]

BLAST of CmoCh02G005850 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.8e-36
Identity = 95/177 (53.67%), Postives = 115/177 (64.97%), Query Frame = 0


Query: 1   MDDIDILKSTLSPSNSIDMSSTILLNNNNSSH-------YPPLPFFSDF--SSPSFHTAQ 60
           M  ++ L    S SN       I++ + +++H       +  LPF        P  +   
Sbjct: 12  MQQMEKLPEHFSNSNPNPNPHNIMMLSESNTHPFFFNPTHSHLPFDQTMPHHQPGLNFRY 71

Query: 61  PVLPNQQNRQKRGGGGGGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRIS 120
              P+    +KR     GG      MAAMREMIFRIA MQPI IDPE +K PKR+NVRIS
Sbjct: 72  APSPSSSLPEKR-----GGCSDNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRIS 131

Query: 121 KDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQ 169
           KDPQSVAAR RRERIS++IRILQRLVPGGTKMDTASMLDEA+HYVKFLK+QVQ+LE+
Sbjct: 132 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEE 183

[Close]

BLAST of CmoCh02G005850 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.0e-35
Identity = 92/152 (60.53%), Postives = 102/152 (67.11%), Query Frame = 0


Query: 29  NSSHYPPLPFFSDFS---SPSFHTAQPVLPNQQNRQKRGG---------GGGGGGGGGGG 88
           NS+HY      SD S    P F     +L N  +                       G  
Sbjct: 40  NSTHYQ-----SDHSMTNEPGFRYGSGLLTNPSSISPNTAYSSVFLDKRNNSNNNNNGTN 99

Query: 89  MAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAARQRRERISQKIRILQRL 148
           MAAMREMIFRIA MQPI IDPE +K PKRRNVRISKDPQSVAAR RRERIS++IRILQRL
Sbjct: 100 MAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRL 159

Query: 149 VPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQ 169
           VPGGTKMDTASMLDEA+HYVKFLK+QVQ+LE+
Sbjct: 160 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLEE 186

[Close]

BLAST of CmoCh02G005850 vs. ExPASy Swiss-Prot
Match: Q9LXD8 (Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.3e-30
Identity = 79/143 (55.24%), Postives = 99/143 (69.23%), Query Frame = 0


Query: 24  LLNNNNSSHYPPLPFFSDFSSPSFHTAQPVLPNQQNRQKRGGGGGGGGGGGGGMAAMREM 83
           + N  +SSH+PPL       S S  T   +  +Q++ +               + AM+EM
Sbjct: 53  IFNPFSSSHFPPL-------SSSLTTTTLLSGDQEDDEDE-------EEPLEELGAMKEM 112

Query: 84  IFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKM 143
           +++IAAMQ + IDP  +K PKRRNVRIS DPQSVAAR RRERIS++IRILQRLVPGGTKM
Sbjct: 113 MYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKM 172

Query: 144 DTASMLDEAVHYVKFLKRQVQTL 167
           DTASMLDEA+ YVKFLKRQ++ L
Sbjct: 173 DTASMLDEAIRYVKFLKRQIRLL 181

[Close]

BLAST of CmoCh02G005850 vs. ExPASy Swiss-Prot
Match: O81313 (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3)

HSP 1 Score: 125.2 bits (313), Expect = 9.0e-28
Identity = 66/107 (61.68%), Postives = 79/107 (73.83%), Query Frame = 0


Query: 77  MAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAARQRRERISQKIRILQRL 136
           M AM+EM + IA MQP+ IDP  +  P RRNVRIS DPQ+V AR+RRERIS+KIRIL+R+
Sbjct: 85  MDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRI 144

Query: 137 VPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNNNNC 184
           VPGG KMDTASMLDEA+ Y KFLKRQV+ L+      A   N +  C
Sbjct: 145 VPGGAKMDTASMLDEAIRYTKFLKRQVRILQPHSQIGAPMANPSYLC 191

[Close]

BLAST of CmoCh02G005850 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.4e-27
Identity = 68/115 (59.13%), Postives = 85/115 (73.91%), Query Frame = 0


Query: 77  MAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAARQRRERISQKIRILQRL 136
           +A M+EMI+R AA +P+    E ++ PKR+NV+IS DPQ+VAARQRRERIS+KIR+LQ L
Sbjct: 242 IAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTL 301

Query: 137 VPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNNNNCPNLSYSSA 192
           VPGGTKMDTASMLDEA +Y+KFL+ QV+ LE        T        NLS+SSA
Sbjct: 302 VPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQT--------NLSFSSA 348

[Close]

BLAST of CmoCh02G005850 vs. ExPASy TrEMBL
Match: A0A6J1G7Q1 (transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111451594 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.3e-110
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MDDIDILKSTLSPSNSIDMSSTILLNNNNSSHYPPLPFFSDFSSPSFHTAQPVLPNQQNR 60
           MDDIDILKSTLSPSNSIDMSSTILLNNNNSSHYPPLPFFSDFSSPSFHTAQPVLPNQQNR
Sbjct: 1   MDDIDILKSTLSPSNSIDMSSTILLNNNNSSHYPPLPFFSDFSSPSFHTAQPVLPNQQNR 60

Query: 61  QKRGGGGGGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAAR 120
           QKRGGGGGGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAAR
Sbjct: 61  QKRGGGGGGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAAR 120

Query: 121 QRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNN 180
           QRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNN
Sbjct: 121 QRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNN 180

Query: 181 NNCPNLSYSSALFKACQMPHAPSMPGSLQMH 212
           NNCPNLSYSSALFKACQMPHAPSMPGSLQMH
Sbjct: 181 NNCPNLSYSSALFKACQMPHAPSMPGSLQMH 211

[Close]

BLAST of CmoCh02G005850 vs. ExPASy TrEMBL
Match: A0A6J1L0E1 (transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111499900 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.8e-93
Identity = 190/211 (90.05%), Postives = 191/211 (90.52%), Query Frame = 0


Query: 1   MDDIDILKSTLSPSNSIDMSSTILLNNNNSSHYPPLPFFSDFSSPSFHTAQPVLPNQQNR 60
           MDDIDILKSTLSPSNSIDMSSTILLNNNN  HY PLPFFSDFSS SFHT QP LPN  +R
Sbjct: 1   MDDIDILKSTLSPSNSIDMSSTILLNNNN-PHYSPLPFFSDFSSLSFHTEQPALPNHHHR 60

Query: 61  QKRGGGGGGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAAR 120
           QKR       GGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAAR
Sbjct: 61  QKR-------GGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAAR 120

Query: 121 QRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNN 180
            RRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHN   T NN
Sbjct: 121 HRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHN---TTNN 180

Query: 181 NNCPNLSYSSALFKACQMPHAPSMPGSLQMH 212
           NNCPNLSYSSALFKACQMPHAPSMPGSLQMH
Sbjct: 181 NNCPNLSYSSALFKACQMPHAPSMPGSLQMH 200

[Close]

BLAST of CmoCh02G005850 vs. ExPASy TrEMBL
Match: A0A5A7TRN4 (Transcription factor HEC2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G003330 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.3e-61
Identity = 152/224 (67.86%), Postives = 163/224 (72.77%), Query Frame = 0


Query: 1   MDDIDILKSTLSPSNSIDMSSTILLNN-NNSSHYPPLPFFSDFSSPS----FHTAQPVLP 60
           MDDIDILKSTLSPS   DMSST   NN        P P+FSD+S P     F T   ++P
Sbjct: 1   MDDIDILKSTLSPS---DMSSTFFPNNCPQLLPVIPPPYFSDYSPPPGTSLFQTTPTIIP 60

Query: 61  NQQNRQKRGGGGGGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQ 120
               RQ+R       G  GGGMAAMREMIFRIAAMQP++IDPE IKAPKRRNVRISKDPQ
Sbjct: 61  EAPARQRR------SGVSGGGMAAMREMIFRIAAMQPVEIDPEAIKAPKRRNVRISKDPQ 120

Query: 121 SVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNAN 180
           SVAAR RRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGF+  N
Sbjct: 121 SVAARHRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFNYNN 180

Query: 181 TTNNNN---------NCPNLSYSSALFKACQMPHAPSMPGSLQM 211
             NNNN         N  NL+Y+SALFKACQ+     MP SLQM
Sbjct: 181 NNNNNNNNNNFNNFVNSANLNYASALFKACQI-----MPASLQM 210

[Close]

BLAST of CmoCh02G005850 vs. ExPASy TrEMBL
Match: A0A0A0LJI7 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G285890 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.7e-61
Identity = 153/227 (67.40%), Postives = 165/227 (72.69%), Query Frame = 0


Query: 1   MDDIDILKSTLSPSNSIDMSSTILLNN---NNSSH----YPPLPFFSDFSSPS----FHT 60
           MDDIDILKSTLS S   DMSST   NN   N + H     PP  +FSD+S P     F T
Sbjct: 1   MDDIDILKSTLSQS---DMSSTFFPNNTAPNCTPHVLPIIPPPAYFSDYSPPPGTSLFQT 60

Query: 61  AQPVLPNQQNRQKRGGGGGGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVR 120
              ++P    RQ+R       G  GGGMAAMREMIFRIAAMQP++IDPE IKAPKRRNVR
Sbjct: 61  TPTIIPETPARQRR------SGVSGGGMAAMREMIFRIAAMQPVEIDPEAIKAPKRRNVR 120

Query: 121 ISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQA 180
           ISKDPQSVAAR RRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQA
Sbjct: 121 ISKDPQSVAARHRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQA 180

Query: 181 GFHNANTTNNNN------NCPNLSYSSALFKACQMPHAPSMPGSLQM 211
           GF+  N  NNNN      N  NL+Y+SALFKACQ+     MP SLQM
Sbjct: 181 GFNYNNNNNNNNNFNNFVNSANLNYASALFKACQI-----MPASLQM 213

[Close]

BLAST of CmoCh02G005850 vs. ExPASy TrEMBL
Match: A0A1S4E2F9 (transcription factor HEC2-like OS=Cucumis melo OX=3656 GN=LOC103497414 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 7.8e-51
Identity = 126/174 (72.41%), Postives = 134/174 (77.01%), Query Frame = 0


Query: 1   MDDIDILKSTLSPSNSIDMSSTILLNN-NNSSHYPPLPFFSDFSSPS----FHTAQPVLP 60
           MDDIDILKSTLSPS   DMSST   NN        P P+FSD+S P     F T   ++P
Sbjct: 1   MDDIDILKSTLSPS---DMSSTFFPNNCPQLLPVIPPPYFSDYSPPPGTSLFQTTPTIIP 60

Query: 61  NQQNRQKRGGGGGGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQ 120
               RQ+R       G  GGGMAAMREMIFRIAAMQP++IDPE IKAPKRRNVRISKDPQ
Sbjct: 61  EAPARQRR------SGVSGGGMAAMREMIFRIAAMQPVEIDPEAIKAPKRRNVRISKDPQ 120

Query: 121 SVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQA 170
           SVAAR RRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQ+
Sbjct: 121 SVAARHRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQS 165

[Close]

BLAST of CmoCh02G005850 vs. NCBI nr
Match: XP_022947833.1 (transcription factor HEC2-like [Cucurbita moschata])

HSP 1 Score: 407.5 bits (1046), Expect = 6.9e-110
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MDDIDILKSTLSPSNSIDMSSTILLNNNNSSHYPPLPFFSDFSSPSFHTAQPVLPNQQNR 60
           MDDIDILKSTLSPSNSIDMSSTILLNNNNSSHYPPLPFFSDFSSPSFHTAQPVLPNQQNR
Sbjct: 1   MDDIDILKSTLSPSNSIDMSSTILLNNNNSSHYPPLPFFSDFSSPSFHTAQPVLPNQQNR 60

Query: 61  QKRGGGGGGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAAR 120
           QKRGGGGGGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAAR
Sbjct: 61  QKRGGGGGGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAAR 120

Query: 121 QRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNN 180
           QRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNN
Sbjct: 121 QRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNN 180

Query: 181 NNCPNLSYSSALFKACQMPHAPSMPGSLQMH 212
           NNCPNLSYSSALFKACQMPHAPSMPGSLQMH
Sbjct: 181 NNCPNLSYSSALFKACQMPHAPSMPGSLQMH 211

[Close]

BLAST of CmoCh02G005850 vs. NCBI nr
Match: KAG7035229.1 (Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 395.6 bits (1015), Expect = 2.7e-106
Identity = 207/211 (98.10%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 1   MDDIDILKSTLSPSNSIDMSSTILLNNNNSSHYPPLPFFSDFSSPSFHTAQPVLPNQQNR 60
           MDDIDILKSTLSPSNSIDMSSTILLNNNNSSHYPPLPFFSDFSSPSFHTAQPVLPNQQNR
Sbjct: 1   MDDIDILKSTLSPSNSIDMSSTILLNNNNSSHYPPLPFFSDFSSPSFHTAQPVLPNQQNR 60

Query: 61  QKRGGGGGGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAAR 120
           QKR    GGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAAR
Sbjct: 61  QKR----GGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAAR 120

Query: 121 QRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNN 180
           QRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNN
Sbjct: 121 QRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNN 180

Query: 181 NNCPNLSYSSALFKACQMPHAPSMPGSLQMH 212
           NNCPNLSYSSALFKACQMPHAPSMPGSLQMH
Sbjct: 181 NNCPNLSYSSALFKACQMPHAPSMPGSLQMH 207

[Close]

BLAST of CmoCh02G005850 vs. NCBI nr
Match: KAG6605270.1 (Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 382.9 bits (982), Expect = 1.8e-102
Identity = 204/211 (96.68%), Postives = 204/211 (96.68%), Query Frame = 0


Query: 1   MDDIDILKSTLSPSNSIDMSSTILLNNNNSSHYPPLPFFSDFSSPSFHTAQPVLPNQQNR 60
           MDDIDILKSTLSP   IDMSSTILLNNNNSSHY PLPFFSDFSSPSFHTAQPVLPNQQNR
Sbjct: 1   MDDIDILKSTLSP---IDMSSTILLNNNNSSHYSPLPFFSDFSSPSFHTAQPVLPNQQNR 60

Query: 61  QKRGGGGGGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAAR 120
           QKR  G GGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAAR
Sbjct: 61  QKR--GCGGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAAR 120

Query: 121 QRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNN 180
           QRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNN
Sbjct: 121 QRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNN 180

Query: 181 NNCPNLSYSSALFKACQMPHAPSMPGSLQMH 212
           NNCPNLSYSSALFKACQMPHAPSMPGSLQMH
Sbjct: 181 NNCPNLSYSSALFKACQMPHAPSMPGSLQMH 206

[Close]

BLAST of CmoCh02G005850 vs. NCBI nr
Match: XP_023007391.1 (transcription factor HEC2-like [Cucurbita maxima])

HSP 1 Score: 350.5 bits (898), Expect = 1.0e-92
Identity = 190/211 (90.05%), Postives = 191/211 (90.52%), Query Frame = 0


Query: 1   MDDIDILKSTLSPSNSIDMSSTILLNNNNSSHYPPLPFFSDFSSPSFHTAQPVLPNQQNR 60
           MDDIDILKSTLSPSNSIDMSSTILLNNNN  HY PLPFFSDFSS SFHT QP LPN  +R
Sbjct: 1   MDDIDILKSTLSPSNSIDMSSTILLNNNN-PHYSPLPFFSDFSSLSFHTEQPALPNHHHR 60

Query: 61  QKRGGGGGGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAAR 120
           QKR       GGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAAR
Sbjct: 61  QKR-------GGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAAR 120

Query: 121 QRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNN 180
            RRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHN   T NN
Sbjct: 121 HRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHN---TTNN 180

Query: 181 NNCPNLSYSSALFKACQMPHAPSMPGSLQMH 212
           NNCPNLSYSSALFKACQMPHAPSMPGSLQMH
Sbjct: 181 NNCPNLSYSSALFKACQMPHAPSMPGSLQMH 200

[Close]

BLAST of CmoCh02G005850 vs. NCBI nr
Match: XP_023534771.1 (transcription factor HEC1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 326.2 bits (835), Expect = 2.0e-85
Identity = 177/196 (90.31%), Postives = 181/196 (92.35%), Query Frame = 0


Query: 19  MSSTILLNNNNSS-HYPPLPFFSDFSSPSFHTAQPVLPN--QQNRQKRGGGGGGGGGGGG 78
           MSSTILLNNNN++ HYPPLPFFSDFSSPSFHTAQ  LPN   QNRQKR    GGGGGGGG
Sbjct: 1   MSSTILLNNNNNNLHYPPLPFFSDFSSPSFHTAQAALPNHHHQNRQKR----GGGGGGGG 60

Query: 79  GMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAARQRRERISQKIRILQR 138
           GMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAARQRRERISQKIRILQR
Sbjct: 61  GMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAARQRRERISQKIRILQR 120

Query: 139 LVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNNNNCPNLSYSSALFKA 198
           LVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHN   T N+NNCPNL+YSSALFKA
Sbjct: 121 LVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHN---TTNSNNCPNLTYSSALFKA 180

Query: 199 CQMPHAPSMPGSLQMH 212
           CQMPHAPSM GSLQMH
Sbjct: 181 CQMPHAPSMSGSLQMH 189

[Close]

BLAST of CmoCh02G005850 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 4.9e-37
Identity = 95/177 (53.67%), Postives = 115/177 (64.97%), Query Frame = 0


Query: 1   MDDIDILKSTLSPSNSIDMSSTILLNNNNSSH-------YPPLPFFSDF--SSPSFHTAQ 60
           M  ++ L    S SN       I++ + +++H       +  LPF        P  +   
Sbjct: 12  MQQMEKLPEHFSNSNPNPNPHNIMMLSESNTHPFFFNPTHSHLPFDQTMPHHQPGLNFRY 71

Query: 61  PVLPNQQNRQKRGGGGGGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRIS 120
              P+    +KR     GG      MAAMREMIFRIA MQPI IDPE +K PKR+NVRIS
Sbjct: 72  APSPSSSLPEKR-----GGCSDNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRIS 131

Query: 121 KDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQ 169
           KDPQSVAAR RRERIS++IRILQRLVPGGTKMDTASMLDEA+HYVKFLK+QVQ+LE+
Sbjct: 132 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEE 183

[Close]

BLAST of CmoCh02G005850 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-36
Identity = 92/152 (60.53%), Postives = 102/152 (67.11%), Query Frame = 0


Query: 29  NSSHYPPLPFFSDFS---SPSFHTAQPVLPNQQNRQKRGG---------GGGGGGGGGGG 88
           NS+HY      SD S    P F     +L N  +                       G  
Sbjct: 40  NSTHYQ-----SDHSMTNEPGFRYGSGLLTNPSSISPNTAYSSVFLDKRNNSNNNNNGTN 99

Query: 89  MAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAARQRRERISQKIRILQRL 148
           MAAMREMIFRIA MQPI IDPE +K PKRRNVRISKDPQSVAAR RRERIS++IRILQRL
Sbjct: 100 MAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRL 159

Query: 149 VPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQ 169
           VPGGTKMDTASMLDEA+HYVKFLK+QVQ+LE+
Sbjct: 160 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLEE 186

[Close]

BLAST of CmoCh02G005850 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 3.1e-31
Identity = 79/143 (55.24%), Postives = 99/143 (69.23%), Query Frame = 0


Query: 24  LLNNNNSSHYPPLPFFSDFSSPSFHTAQPVLPNQQNRQKRGGGGGGGGGGGGGMAAMREM 83
           + N  +SSH+PPL       S S  T   +  +Q++ +               + AM+EM
Sbjct: 53  IFNPFSSSHFPPL-------SSSLTTTTLLSGDQEDDEDE-------EEPLEELGAMKEM 112

Query: 84  IFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKM 143
           +++IAAMQ + IDP  +K PKRRNVRIS DPQSVAAR RRERIS++IRILQRLVPGGTKM
Sbjct: 113 MYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKM 172

Query: 144 DTASMLDEAVHYVKFLKRQVQTL 167
           DTASMLDEA+ YVKFLKRQ++ L
Sbjct: 173 DTASMLDEAIRYVKFLKRQIRLL 181

[Close]

BLAST of CmoCh02G005850 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 125.2 bits (313), Expect = 6.4e-29
Identity = 66/107 (61.68%), Postives = 79/107 (73.83%), Query Frame = 0


Query: 77  MAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAARQRRERISQKIRILQRL 136
           M AM+EM + IA MQP+ IDP  +  P RRNVRIS DPQ+V AR+RRERIS+KIRIL+R+
Sbjct: 85  MDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRI 144

Query: 137 VPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNNNNC 184
           VPGG KMDTASMLDEA+ Y KFLKRQV+ L+      A   N +  C
Sbjct: 145 VPGGAKMDTASMLDEAIRYTKFLKRQVRILQPHSQIGAPMANPSYLC 191

[Close]

BLAST of CmoCh02G005850 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 123.2 bits (308), Expect = 2.4e-28
Identity = 68/115 (59.13%), Postives = 85/115 (73.91%), Query Frame = 0


Query: 77  MAAMREMIFRIAAMQPIQIDPEEIKAPKRRNVRISKDPQSVAARQRRERISQKIRILQRL 136
           +A M+EMI+R AA +P+    E ++ PKR+NV+IS DPQ+VAARQRRERIS+KIR+LQ L
Sbjct: 242 IAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTL 301

Query: 137 VPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQAGFHNANTTNNNNNCPNLSYSSA 192
           VPGGTKMDTASMLDEA +Y+KFL+ QV+ LE        T        NLS+SSA
Sbjct: 302 VPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQT--------NLSFSSA 348

The following BLAST results are available for this feature:

BLAST of CmoCh02G005850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SND4	6.8e-36	53.67	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
Q9FHA7	2.0e-35	60.53	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]
Q9LXD8	4.3e-30	55.24	Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1	[more]
O81313	9.0e-28	61.68	Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3	[more]
Q8S3D2	3.4e-27	59.13	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]

BLAST of CmoCh02G005850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7Q1	3.3e-110	100.00	transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111451594 PE=...	[more]
A0A6J1L0E1	4.8e-93	90.05	transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111499900 PE=4 ...	[more]
A0A5A7TRN4	1.3e-61	67.86	Transcription factor HEC2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A0A0LJI7	1.7e-61	67.40	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G285890 PE=4 S...	[more]
A0A1S4E2F9	7.8e-51	72.41	transcription factor HEC2-like OS=Cucumis melo OX=3656 GN=LOC103497414 PE=4 SV=1	[more]

BLAST of CmoCh02G005850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947833.1	6.9e-110	100.00	transcription factor HEC2-like [Cucurbita moschata]	[more]
KAG7035229.1	2.7e-106	98.10	Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6605270.1	1.8e-102	96.68	Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023007391.1	1.0e-92	90.05	transcription factor HEC2-like [Cucurbita maxima]	[more]
XP_023534771.1	2.0e-85	90.31	transcription factor HEC1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh02G005850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50330.1	4.9e-37	53.67	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G67060.1	1.4e-36	60.53	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G09750.1	3.1e-31	55.24	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	6.4e-29	61.68	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G21330.1	2.4e-28	59.13	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 149..169
None	No IPR available	GENE3D	1.10.8.1170		coord: 53..100 e-value: 2.4E-5 score: 25.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..63
None	No IPR available	PANTHER	PTHR45914:SF29	BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN	coord: 76..200
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 76..200
None	No IPR available	CDD	cd11454	bHLH_AtIND_like	coord: 111..167 e-value: 5.3714E-35 score: 116.723
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 116..165 e-value: 9.8E-14 score: 61.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 119..159 e-value: 2.5E-7 score: 30.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 110..159 score: 15.281461
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 109..182 e-value: 5.9E-13 score: 50.7
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 114..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G005850.1	CmoCh02G005850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity