CmoCh02G005730 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh02G005730
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase
LocationCmo_Chr02: 3351001 .. 3354759 (+)
RNA-Seq ExpressionCmoCh02G005730
SyntenyCmoCh02G005730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCAAAAGCGCACAACTCTTCCTCCTTCAAGAGTTTCTTGAAATCCCGGACCCAAAAACCTCACAGAAACCCTAAAAGGAGAGTTTGTAATCAGATGTCGGACCCAAACGATACGGATTCCGACGCCCCCGAAGAGTTCACCGCCGAGCAGGTTCGTTGTTTCCAACTTTCTATATTTCTATTTGCCGCTTGTTTGAACTCGATCGTAGTTCCTCCAGCTATGTTCTAAGGAAGCAGGGATTTATATTAGGAACTCATCTGTTGCAGGGAATACAGCAGGATGAAGAGATTAGAAAAGTTCAAAAAGAAAGTAGCGCTAGGTGTGTTTTCAATCCGTATTTCCCATTACCGAATTGTATTTGGTGTCCAACCTTGTGCTTTCATCATTATTTCACCAATGACTTTTCTATTTAGTTTTTGTAAAGTTTGATTCTCTATTTATTTCCATGGATTTTTCGTCATCCTTCATGGGATTTAATGGCTTCACGTGTAATCTACTTCTGCATTGTGTTTAGTCTTCTCACTGCGTTTGGAGCTGTTTTTGTGGTTTTGTGTTTTCACTTCTCTTATTTGAAGTTGAGCTGACATTGTAGATTCTTAAGACATGGCTTCAATTATTTATTTCGATTGCATATGATATTGTCGATGGATTTCTGCTATATATATTTATTGTATATGTATATGTATGTACATATAGATATATGAGTGAGGATTTGAACCTTCAAGAAGTAGGCGATAACCCCAAAATTTCTATCTTAAACTCCAGACGACGATGCAACAAGATTAGGAATATCAACATGTTTATGTTTCTCTCTAACCAAATTTACTGAAGAGTTGCTTCACCATGTTATAGAAGAGTTCCTTAGCCTTCAGTTTGAAGGAGTTCCCTCCTGCAATTGAAAGTTCAGATCCTTGACCTGCAAAGGGAAAACATAAAATAGTCCTGCATCCTGTACCACACTGCAATAAAATGGGCAGAGAAAGGAAACAAGATTCGATCTCTCATCTTATAGTCTACTCATATTGCAACACCCTGCCCTAAGGATAACACAAGCAATTATTTTTCTGAGTTCCATCAGCACTAGTAGTGTTTGTTGCTACCATGGATCCCAAACCAGTAGAACACGCTTGTCTTCTTCTGACACCTATGATTCCATACCAGACTACTGAGGGAAGGAGGATAGCAATCTCAGTTGTTGACCTCTTGAAGAACAGGCTCAAGAAAATTTTCCTGAACTTTTTGAATACCAAATCCTGACATGTTGTCCATCGGTAGTAAAGAGATGATTTACCTACCTGATCAAAGTTAACCCTCCCTGAAACTTCCAATCTTGAGATTCCTGCTAAATACCAAGTTCCATAGTCTCAGAATTTCTAGAGTCATAAATGTTGAACTTCTTTTATTTGTGAGGGCATAGACTTAAGATCCGAGATAGTTGAAAGAGTTTTGGGACCGTTGATCCTTCTTGACGTGAACAGACGTATCTACGTTTGCCCACCTTGATAACTGAATTCTCTTAGGAATTATGTGACATTGTACTTTTGGAGATTAGAAACCACAAGCTTACGTGCTGCTATACGAGCATCTACCAGAAGTCCAAATCCCAATCTAACAAAAAGGGCCAATCCATCAGGTTAGGGTTTCTCATAATCAAGCATGCAGGATAACCCTTCCTCTTTATTTTTTTTCCGCATTAATCAGGATATTCTTAACGAGTATGTGATTCAGGGTTTGTCCATCTTCCTTGAAGGGCAATGGAAATGGTAAAGAGAAGGACCATCTAAGGTTTTGTAGTGCAAATATTAACAGCACACTCATGTCAAAGCTTAAACCATGTTTTGAAGGACTATTGAACCTTAAACCTTGAGGCTTGCCTAGCTTCAGGTTGAGGCTCAAATTTTTAAGCCTCTATACTTGGCCTTCTTTGATTCATAAGGGGGTTATGCCTTAACCGTAAAAATGTATTACATCTACTGTAGGATATAACATCTTGAAACCCAATCAATAATTTTTCAGTCCAACAGAAGAGACCAAACAATGATACCCACTAAAAGTCTCCAAAGGTCTTTTTGTCAGAGAAGCCTATGCAGTGAAACTTTGCTCAGAAATCCATAATAGAAGGAATGCACCAATTTTTTTGGCTTGCCAGCAATATGTTCATAAAATCGAAGTGAAGTGGAAAGTAATGGAAAGACAATCCAACGATTTTCCTTGATTCTGCAGGGTTTTTTATTTACAAATACAATTCTAAATTCCTTTTCATATGGCTTTATATGTTATTGTCTGTCTTTTTTTCATTGTTCAATAATCTAGTTCAAAAAGAACAAAGGTGGTTTAATTTTGTGCATAAATTGCTGAGGCTCAATGTTCACAACAATGGTAACTATGATTTCTTTTCACGGTTTAATTTCTTGTTGGCAATTATTTCATGAGTTTCTTACCTCAAATGCAGTAGGATTCTATGGTTGTTTCATGCTGTTAATTAAGGTGCATGTAAATTGGCTTGGATTGCTAATTATGTTTATTGCTGTTGTAATTAGATCAGGTTTTTGTGTTATTATTGAGCCCTTGATTTGAGCCTGGGCAATTCTGTCTTTTACTTAATGGGTTGCCCTCTGATCTGTTTTCCATCTTCTGCACTAACAAGAATAAGATTTTTAGGCACACCAGATGCTCTGAACCATGTTTTTTAATCAATGAAACAAATGATAGTTGGCTAGGATGGCTTGCTTTGTCATGCCCATTGCTATAGGGTATTTTCCACTAAGAGCATTACTGAATCGAGGATAGTCGTTCATTCTCAGAATTCAGTGTAGTGTTGGGAATTCCTGCCCGCGATGCAATTAGATGATATCTGAAAGGATAGTGTCCTTTGATGCACGTCTGGTTATTACTTGGTTTTTTGGACAGAACATGATAAATGGCATTATTTATGTAGGGTTGTCCGTGAAGGTAAAGAACGTCGTAGACAGTGGGCCGAAAAGAAAACACCACGCGCATCTAAAAAAAGCGAAACTGTCGAAGATGTAGCAGAAACCCCTAGACACAATGATCAAGTTAGCAAGTTGGGAATGCTTCCCAGTAATCTTGTCCAACTGCTTGCCGAGCGTGAGAAGTACGTCTCTTTCCCACTCTCCATTCATTTTGCTCAGATTATAGTTTCGCTAAACATCTAATTTGGTATATACTCTCCATCTATAGACAAGTTTTCTCATCAGACCCAGGCGACGAAAAGCCTGCAGCTAAATCAAAAACAAAGAGGAAGAAAAGCAAAAGCTCTGGGTGAGGGACCTGACTCTGTAGTTACTGAAGATGTTCTTCTTGATTTTATTATACCTTCTGAAATAGAACGACTCATTTTTGTAAATGCAGGATTGAAACGGTTCTTTTAAACGAGAGAGCACCATCTCAATGCTTACAGAACTCATTGGAATTTTTGAAGAAAAGGAAGATGAATATTCCAAGGTCATCATCGGTTCTCGACAATTCTAACCAAGCGTTACGCCTTCTTTCTTCATCGGGCCTTTTAACTAAGAAATAGCATTTTTTCTTGTTTGTTTCTAAAGCGATTATTGGGTTTCTGTCAGCTTCAACAGGATAATGTACAATGTATTTGAGATTTTAAGTTCAAGACTGATGCAACATGGAGAGTAAAAAAGTTCATTGATTTCTTATAGTGGGCATAGTCTCATAGCCACATAATTGAAAATGATGGGAGCAGTAAATGTTAGTGAATGAATGATTTTATTATGCAGTAA

mRNA sequence

CTCAAAAGCGCACAACTCTTCCTCCTTCAAGAGTTTCTTGAAATCCCGGACCCAAAAACCTCACAGAAACCCTAAAAGGAGAGTTTGTAATCAGATGTCGGACCCAAACGATACGGATTCCGACGCCCCCGAAGAGTTCACCGCCGAGCAGGGAATACAGCAGGATGAAGAGATTAGAAAAGTTCAAAAAGAAAGTAGCGCTAGGGTTGTCCGTGAAGGTAAAGAACGTCGTAGACAGTGGGCCGAAAAGAAAACACCACGCGCATCTAAAAAAAGCGAAACTGTCGAAGATGTAGCAGAAACCCCTAGACACAATGATCAAGTTAGCAAGTTGGGAATGCTTCCCAGTAATCTTGTCCAACTGCTTGCCGAGCGTGAGAAACAAGTTTTCTCATCAGACCCAGGCGACGAAAAGCCTGCAGCTAAATCAAAAACAAAGAGGAAGAAAAGCAAAAGCTCTGGGATTGAAACGGTTCTTTTAAACGAGAGAGCACCATCTCAATGCTTACAGAACTCATTGGAATTTTTGAAGAAAAGGAAGATGAATATTCCAAGGTCATCATCGGTTCTCGACAATTCTAACCAAGCGTTACGCCTTCTTTCTTCATCGGGCCTTTTAACTAAGAAATAGCATTTTTTCTTGTTTGTTTCTAAAGCGATTATTGGGTTTCTGTCAGCTTCAACAGGATAATGTACAATGTATTTGAGATTTTAAGTTCAAGACTGATGCAACATGGAGAGTAAAAAAGTTCATTGATTTCTTATAGTGGGCATAGTCTCATAGCCACATAATTGAAAATGATGGGAGCAGTAAATGTTAGTGAATGAATGATTTTATTATGCAGTAA

Coding sequence (CDS)

ATGTCGGACCCAAACGATACGGATTCCGACGCCCCCGAAGAGTTCACCGCCGAGCAGGGAATACAGCAGGATGAAGAGATTAGAAAAGTTCAAAAAGAAAGTAGCGCTAGGGTTGTCCGTGAAGGTAAAGAACGTCGTAGACAGTGGGCCGAAAAGAAAACACCACGCGCATCTAAAAAAAGCGAAACTGTCGAAGATGTAGCAGAAACCCCTAGACACAATGATCAAGTTAGCAAGTTGGGAATGCTTCCCAGTAATCTTGTCCAACTGCTTGCCGAGCGTGAGAAACAAGTTTTCTCATCAGACCCAGGCGACGAAAAGCCTGCAGCTAAATCAAAAACAAAGAGGAAGAAAAGCAAAAGCTCTGGGATTGAAACGGTTCTTTTAAACGAGAGAGCACCATCTCAATGCTTACAGAACTCATTGGAATTTTTGAAGAAAAGGAAGATGAATATTCCAAGGTCATCATCGGTTCTCGACAATTCTAACCAAGCGTTACGCCTTCTTTCTTCATCGGGCCTTTTAACTAAGAAATAG

Protein sequence

MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKKSETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSKSSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK
Homology
[Close]
BLAST of CmoCh02G005730 vs. ExPASy TrEMBL
Match: A0A6J1G7P4 (uncharacterized protein LOC111451498 OS=Cucurbita moschata OX=3662 GN=LOC111451498 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 9.1e-85
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60
           MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK
Sbjct: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60

Query: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120
           SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK
Sbjct: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120

Query: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 179
           SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK
Sbjct: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 178

[Close]
BLAST of CmoCh02G005730 vs. ExPASy TrEMBL
Match: A0A6J1KZ49 (uncharacterized protein LOC111499570 OS=Cucurbita maxima OX=3661 GN=LOC111499570 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.7e-81
Identity = 171/178 (96.07%), Postives = 174/178 (97.75%), Query Frame = 0 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60
           MSDPNDTDSDAPEEFTAEQGIQQDEEIRK+QKESSARVVREGKERRRQWAEKKTPR SKK
Sbjct: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKLQKESSARVVREGKERRRQWAEKKTPRPSKK 60

Query: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120
            ETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKT+R+KSK
Sbjct: 61  GETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTRRRKSK 120

Query: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 179
           SSGIETVLLN RAPSQC QNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK
Sbjct: 121 SSGIETVLLNARAPSQCSQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 178

[Close]
BLAST of CmoCh02G005730 vs. ExPASy TrEMBL
Match: A0A6J1DXW1 (uncharacterized protein LOC111025162 OS=Momordica charantia OX=3673 GN=LOC111025162 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 7.5e-71
Identity = 154/177 (87.01%), Postives = 161/177 (90.96%), Query Frame = 0 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60
           MSD  DTDSDAPEEFTAEQGIQQD+EI KVQ ES ARVVREGKERRR WAEKKTPR SKK
Sbjct: 1   MSDGEDTDSDAPEEFTAEQGIQQDQEITKVQNESKARVVREGKERRRLWAEKKTPRPSKK 60

Query: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120
            ETVEDVAE P H DQ SKLGMLPSNLVQLLA+REKQVFSSDPGDEKPAAK KTKRKK+K
Sbjct: 61  GETVEDVAEIPSHIDQSSKLGMLPSNLVQLLADREKQVFSSDPGDEKPAAKPKTKRKKTK 120

Query: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTK 178
           SSGIETV+LN+R P+QCLQNS+EFLKKRKMNIPRSSSVLDN NQALR LSSSGLLTK
Sbjct: 121 SSGIETVVLNKRQPAQCLQNSMEFLKKRKMNIPRSSSVLDNPNQALRRLSSSGLLTK 177

[Close]
BLAST of CmoCh02G005730 vs. ExPASy TrEMBL
Match: A0A0A0LM07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292200 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.9e-67
Identity = 145/178 (81.46%), Postives = 158/178 (88.76%), Query Frame = 0 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60
           MSD  +TDSDAPEEFTAEQG+QQDEEIRKVQKES ARV+REGKERRR WAEKKTPR SKK
Sbjct: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60

Query: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120
            E VED+AE PR++D++SKLG LPSN+VQLL +REKQVFSSD GDEKPA K K KRKK+K
Sbjct: 61  GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK 120

Query: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 179
           SSGIETVLLNER PS CLQNSLEFLKKRKMN+ RSS+VL N NQA RLLSSSGLLTKK
Sbjct: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK 178

[Close]
BLAST of CmoCh02G005730 vs. ExPASy TrEMBL
Match: A0A5A7TWK6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002660 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.4e-64
Identity = 144/179 (80.45%), Postives = 158/179 (88.27%), Query Frame = 0 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60
           MSD  +TDSDAPEEFTAEQG+QQDEEIRKVQ ES ARV+REGKERRR WAEKKTPR SKK
Sbjct: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQNESKARVIREGKERRRLWAEKKTPRPSKK 60

Query: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120
            E VED+AE PR++D+VSKLG LPSN+VQLL +REKQVFSSD GDEKPA K K KRKK+K
Sbjct: 61  GEIVEDLAEPPRNDDKVSKLGTLPSNVVQLLVDREKQVFSSDLGDEKPAIKPKQKRKKTK 120

Query: 121 -SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 179
            SSGIETVLL+ER PS CLQNSLEFLKKRKMN+ RSS+VL+N NQA RLLSSSGLLTKK
Sbjct: 121 SSSGIETVLLSERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK 179

[Close]
BLAST of CmoCh02G005730 vs. NCBI nr
Match: XP_022947715.1 (uncharacterized protein LOC111451498 [Cucurbita moschata])

HSP 1 Score: 322.8 bits (826), Expect = 1.9e-84
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60
           MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK
Sbjct: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60

Query: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120
           SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK
Sbjct: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120

Query: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 179
           SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK
Sbjct: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 178

[Close]
BLAST of CmoCh02G005730 vs. NCBI nr
Match: KAG7035221.1 (hypothetical protein SDJN02_02016, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 318.2 bits (814), Expect = 4.6e-83
Identity = 176/178 (98.88%), Postives = 176/178 (98.88%), Query Frame = 0 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60
           MSD NDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK
Sbjct: 1   MSDSNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60

Query: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120
            ETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK
Sbjct: 61  GETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120

Query: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 179
           SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK
Sbjct: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 178

[Close]
BLAST of CmoCh02G005730 vs. NCBI nr
Match: KAG6605258.1 (hypothetical protein SDJN03_02575, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 316.6 bits (810), Expect = 1.3e-82
Identity = 175/178 (98.31%), Postives = 176/178 (98.88%), Query Frame = 0 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60
           MSD NDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK
Sbjct: 1   MSDSNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60

Query: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120
            ETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK
Sbjct: 61  GETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120

Query: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 179
           SSGI+TVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK
Sbjct: 121 SSGIKTVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 178

[Close]
BLAST of CmoCh02G005730 vs. NCBI nr
Match: XP_023006926.1 (uncharacterized protein LOC111499570 [Cucurbita maxima])

HSP 1 Score: 311.2 bits (796), Expect = 5.7e-81
Identity = 171/178 (96.07%), Postives = 174/178 (97.75%), Query Frame = 0 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60
           MSDPNDTDSDAPEEFTAEQGIQQDEEIRK+QKESSARVVREGKERRRQWAEKKTPR SKK
Sbjct: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKLQKESSARVVREGKERRRQWAEKKTPRPSKK 60

Query: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120
            ETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKT+R+KSK
Sbjct: 61  GETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTRRRKSK 120

Query: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 179
           SSGIETVLLN RAPSQC QNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK
Sbjct: 121 SSGIETVLLNARAPSQCSQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 178

[Close]
BLAST of CmoCh02G005730 vs. NCBI nr
Match: XP_023533260.1 (uncharacterized protein LOC111795202 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.8 bits (795), Expect = 7.4e-81
Identity = 172/178 (96.63%), Postives = 174/178 (97.75%), Query Frame = 0 

Query: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60
           MSDPNDTDSDAPEEFTAEQGIQQDEEI KVQKESSARVVREGKERRRQWAEKKTPR SKK
Sbjct: 119 MSDPNDTDSDAPEEFTAEQGIQQDEEITKVQKESSARVVREGKERRRQWAEKKTPRPSKK 178

Query: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120
            ETVEDVAETPRH+DQVSKLGML SNLVQLLAEREKQVFSSDPGDEKPAAKSKTKR+KSK
Sbjct: 179 GETVEDVAETPRHDDQVSKLGMLSSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRRKSK 238

Query: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 179
           SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK
Sbjct: 239 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 296

[Close]
BLAST of CmoCh02G005730 vs. TAIR 10
Match: AT4G37090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 124.8 bits (312), Expect = 7.0e-29
Identity = 85/183 (46.45%), Postives = 116/183 (63.39%), Query Frame = 0 

Query: 1   MSD--PNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRAS 60
           MSD    D+DSDAPEE T EQ   ++E + K+Q+E+  RV RE KERR+  AE+ T R S
Sbjct: 1   MSDNKDRDSDSDAPEELTQEQAKLEEEALWKIQRENKNRVSREKKERRKLMAEQVTLRKS 60

Query: 61  KKSETVEDVA--ETPRHNDQ-VSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTK 120
           +K E +EDV   E P  N + ++  G L  +++  LAEREKQ   SD  +E+       +
Sbjct: 61  RKIEIIEDVVEEEEPEENSEALANKGFLSKDIIDFLAEREKQKAESD-SEEEEIIDELPR 120

Query: 121 RKKSKSSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLL 179
           +KK KSSGIETV+  E  P +CL+  L+FLK R+  +PRSSSV+ NS QALRL + + L 
Sbjct: 121 KKKQKSSGIETVIYKEIPPPECLKTGLDFLKMRRAQVPRSSSVIKNSGQALRLATGAALA 180

[Close]
BLAST of CmoCh02G005730 vs. TAIR 10
Match: AT4G37090.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-27
Identity = 85/183 (46.45%), Postives = 116/183 (63.39%), Query Frame = 0 

Query: 1   MSD--PNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRAS 60
           MSD    D+DSDAPEE T EQ   ++E + K+Q+E+  RV RE KERR+  AE+ T R S
Sbjct: 1   MSDNKDRDSDSDAPEELTQEQ--LEEEALWKIQRENKNRVSREKKERRKLMAEQVTLRKS 60

Query: 61  KKSETVEDVA--ETPRHNDQ-VSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTK 120
           +K E +EDV   E P  N + ++  G L  +++  LAEREKQ   SD  +E+       +
Sbjct: 61  RKIEIIEDVVEEEEPEENSEALANKGFLSKDIIDFLAEREKQKAESD-SEEEEIIDELPR 120

Query: 121 RKKSKSSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLL 179
           +KK KSSGIETV+  E  P +CL+  L+FLK R+  +PRSSSV+ NS QALRL + + L 
Sbjct: 121 KKKQKSSGIETVIYKEIPPPECLKTGLDFLKMRRAQVPRSSSVIKNSGQALRLATGAALA 180

The following BLAST results are available for this feature:
BLAST of CmoCh02G005730 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh02G005730 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G7P49.1e-85100.00uncharacterized protein LOC111451498 OS=Cucurbita moschata OX=3662 GN=LOC1114514... [more]
A0A6J1KZ492.7e-8196.07uncharacterized protein LOC111499570 OS=Cucurbita maxima OX=3661 GN=LOC111499570... [more]
A0A6J1DXW17.5e-7187.01uncharacterized protein LOC111025162 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A0A0LM072.9e-6781.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292200 PE=4 SV=1[more]
A0A5A7TWK61.4e-6480.45Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of CmoCh02G005730 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022947715.11.9e-84100.00uncharacterized protein LOC111451498 [Cucurbita moschata][more]
KAG7035221.14.6e-8398.88hypothetical protein SDJN02_02016, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6605258.11.3e-8298.31hypothetical protein SDJN03_02575, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023006926.15.7e-8196.07uncharacterized protein LOC111499570 [Cucurbita maxima][more]
XP_023533260.17.4e-8196.63uncharacterized protein LOC111795202 [Cucurbita pepo subsp. pepo][more]
BLAST of CmoCh02G005730 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G37090.17.0e-2946.45unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G37090.21.3e-2746.45unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..112
NoneNo IPR availablePANTHERPTHR36387UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE-2, 6-DIAMINOPIMELATE LIGASEcoord: 5..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G005730.1CmoCh02G005730.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016874 ligase activity