CmoCh02G005710 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCCCCATATCTTCACAGCCTTGCAACCCTCTGGACATCATGTGTTATCTCGTGGAGTGCAAGACGTGCAACAAGACCTCCTGGAAGGGCTGTGGCAATCACCTGCCTGATCTCTATAAGCGAATTGAGAAGGGAAAGCACTGCACTTGCCGCCCCTGGCCCGGCGTCGTCGTGCCCCTTGAGGATTCTGCTGACATGAAAACCGCACCGCCAACGATGGCTAACCCGAAATCATCTGTCACTGAAGGTACACCGCTACACATATCTCAACTCAACTCGTTCAATTTAGATTGTGGTAATTTATAATGACATCTTCTTCAAAGTCAAATTTGGTGACGTTGAACAAGAAAATAATAAAATATTTAATAATTTCTAAAATCAATAGAAATTTGGCGACCAAAATAAAATTATTACAAAGCATGTAATTTTAGTTTTCTTATTAAAAAAATTAGCCAATCACAAAGAAATTATTATAAACATGTTTTTGTAAATAAAAAATAACGAACAATAAAAGATAAATAAATATCGTTACGTGTTTTGTAGGTACTGAAAGTTGGGGTTCGTTTGTGCAGGTAAGACAGTTGATAAGGAAGCTTAGGGAAGCGTGGAGTGGCTAAGTTAGAGAGGTTTGAGTCATTTAAGCAATTTCATATGAATTATTGTTATATAAATAAGGACGGGTTTGTACGGGAT CTCCCCATATCTTCACAGCCTTGCAACCCTCTGGACATCATGTGTTATCTCGTGGAGTGCAAGACGTGCAACAAGACCTCCTGGAAGGGCTGTGGCAATCACCTGCCTGATCTCTATAAGCGAATTGAGAAGGGAAAGCACTGCACTTGCCGCCCCTGGCCCGGCGTCGTCGTGCCCCTTGAGGATTCTGCTGACATGAAAACCGCACCGCCAACGATGGCTAACCCGAAATCATCTGTCACTGAAGGTACACCGCTACACATATCTCAACTCAACTCGTTCAATTTAGATTGTGGTACTGAAAGTTGGGGTTCGTTTGTGCAGGTAAGACAGTTGATAAGGAAGCTTAGGGAAGCGTGGAGTGGCTAAGTTAGAGAGGTTTGAGTCATTTAAGCAATTTCATATGAATTATTGTTATATAAATAAGGACGGGTTTGTACGGGAT CTCCCCATATCTTCACAGCCTTGCAACCCTCTGGACATCATGTGTTATCTCGTGGAGTGCAAGACGTGCAACAAGACCTCCTGGAAGGGCTGTGGCAATCACCTGCCTGATCTCTATAAGCGAATTGAGAAGGGAAAGCACTGCACTTGCCGCCCCTGGCCCGGCGTCGTCGTGCCCCTTGAGGATTCTGCTGACATGAAAACCGCACCGCCAACGATGGCTAACCCGAAATCATCTGTCACTGAAGGTACACCGCTACACATATCTCAACTCAACTCGTTCAATTTAGATTGTGGTACTGAAAGTTGGGGTTCGTTTGTGCAGGTAAGACAGTTGATAAGGAAGCTTAGGGAAGCGTGGAGTGGCTAA LPISSQPCNPLDIMCYLVECKTCNKTSWKGCGNHLPDLYKRIEKGKHCTCRPWPGVVVPLEDSADMKTAPPTMANPKSSVTEGTPLHISQLNSFNLDCGTESWGSFVQVRQLIRKLREAWSG Homology
BLAST of CmoCh02G005710 vs. ExPASy TrEMBL
Match: A0A0A0LJK5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287170 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 7.3e-17 Identity = 43/70 (61.43%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of CmoCh02G005710 vs. ExPASy TrEMBL
Match: A0A0L9UR73 (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan06g038300 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 2.3e-15 Identity = 45/91 (49.45%), Postives = 55/91 (60.44%), Query Frame = 0
BLAST of CmoCh02G005710 vs. ExPASy TrEMBL
Match: A0A2C9USL7 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G132300 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 3.1e-15 Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = 0
BLAST of CmoCh02G005710 vs. ExPASy TrEMBL
Match: A0A5A7TSL2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G003810 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 5.2e-15 Identity = 36/51 (70.59%), Postives = 40/51 (78.43%), Query Frame = 0
BLAST of CmoCh02G005710 vs. ExPASy TrEMBL
Match: A0A3N7F5W7 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G034000 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 1.2e-14 Identity = 35/51 (68.63%), Postives = 40/51 (78.43%), Query Frame = 0
BLAST of CmoCh02G005710 vs. NCBI nr
Match: KAG6605256.1 (hypothetical protein SDJN03_02573, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 146.0 bits (367), Expect = 2.2e-31 Identity = 65/71 (91.55%), Postives = 67/71 (94.37%), Query Frame = 0
BLAST of CmoCh02G005710 vs. NCBI nr
Match: KAG7035219.1 (hypothetical protein SDJN02_02014 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 144.4 bits (363), Expect = 6.3e-31 Identity = 64/71 (90.14%), Postives = 67/71 (94.37%), Query Frame = 0
BLAST of CmoCh02G005710 vs. NCBI nr
Match: KGN62035.1 (hypothetical protein Csa_006238 [Cucumis sativus]) HSP 1 Score: 96.7 bits (239), Expect = 1.5e-16 Identity = 43/70 (61.43%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of CmoCh02G005710 vs. NCBI nr
Match: KAG8641286.1 (hypothetical protein MANES_13G132300v8 [Manihot esculenta]) HSP 1 Score: 91.7 bits (226), Expect = 4.8e-15 Identity = 36/71 (50.70%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of CmoCh02G005710 vs. NCBI nr
Match: KOM45077.1 (hypothetical protein LR48_Vigan06g038300 [Vigna angularis]) HSP 1 Score: 91.7 bits (226), Expect = 4.8e-15 Identity = 45/91 (49.45%), Postives = 55/91 (60.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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