CmoCh02G005600 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G005600
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	HTH-type transcriptional regulator protein ptxE
Location	Cmo_Chr02: 3192805 .. 3193266 (-)
RNA-Seq Expression	CmoCh02G005600
Synteny	CmoCh02G005600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATTTGCATTTCCTCCGATTCCCCCAATGTTTCTACGGCCAAACTCATTCTTTCGGACGGAACATTGCTGGAATATTCGTACCCGGTAAAGGTTTCGTATGTACTACATAAAGATCCGGCGAGTTTCATTTGCAACTCCGACGATATGGATTTCAACGATGTTGTAACCGCCGTTGACGACGACGACGAGCTTCAACTCGGGCAGCTTTACTTTGCGCTGCCGTTGGAGAAGCTGAACAAGCCGCTTCACGCGGAGGATATGGCTGCATTGGCTGTGAAGGCTAGCTCGGCGCTGATGAAGGCGGGCGGTGGAGGGAGTGAGAAATGTGGGTCACGGCGGGCGGTGGTGTTTTCTGAGGAGGAGCTTAGGAAGGGTCCGAGAAAGGGTGTGAAGAAGGGGACAGGGAGTGGTGGAAGTAGGAAATTCACGGCGAAATTGTGTGCAATCCCTGAATGA

mRNA sequence

ATGGGTATTTGCATTTCCTCCGATTCCCCCAATGTTTCTACGGCCAAACTCATTCTTTCGGACGGAACATTGCTGGAATATTCGTACCCGGTAAAGGTTTCGTATGTACTACATAAAGATCCGGCGAGTTTCATTTGCAACTCCGACGATATGGATTTCAACGATGTTGTAACCGCCGTTGACGACGACGACGAGCTTCAACTCGGGCAGCTTTACTTTGCGCTGCCGTTGGAGAAGCTGAACAAGCCGCTTCACGCGGAGGATATGGCTGCATTGGCTGTGAAGGCTAGCTCGGCGCTGATGAAGGCGGGCGGTGGAGGGAGTGAGAAATGTGGGTCACGGCGGGCGGTGGTGTTTTCTGAGGAGGAGCTTAGGAAGGGTCCGAGAAAGGGTGTGAAGAAGGGGACAGGGAGTGGTGGAAGTAGGAAATTCACGGCGAAATTGTGTGCAATCCCTGAATGA

Coding sequence (CDS)

ATGGGTATTTGCATTTCCTCCGATTCCCCCAATGTTTCTACGGCCAAACTCATTCTTTCGGACGGAACATTGCTGGAATATTCGTACCCGGTAAAGGTTTCGTATGTACTACATAAAGATCCGGCGAGTTTCATTTGCAACTCCGACGATATGGATTTCAACGATGTTGTAACCGCCGTTGACGACGACGACGAGCTTCAACTCGGGCAGCTTTACTTTGCGCTGCCGTTGGAGAAGCTGAACAAGCCGCTTCACGCGGAGGATATGGCTGCATTGGCTGTGAAGGCTAGCTCGGCGCTGATGAAGGCGGGCGGTGGAGGGAGTGAGAAATGTGGGTCACGGCGGGCGGTGGTGTTTTCTGAGGAGGAGCTTAGGAAGGGTCCGAGAAAGGGTGTGAAGAAGGGGACAGGGAGTGGTGGAAGTAGGAAATTCACGGCGAAATTGTGTGCAATCCCTGAATGA

Protein sequence

MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRAVVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE

Homology

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BLAST of CmoCh02G005600 vs. ExPASy TrEMBL
Match: A0A6J1G7I2 (uncharacterized protein LOC111451454 OS=Cucurbita moschata OX=3662 GN=LOC111451454 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 7.1e-78
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV 60
           MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV
Sbjct: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV 60

Query: 61  DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRAVVFS 120
           DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRAVVFS
Sbjct: 61  DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRAVVFS 120

Query: 121 EEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE 154
           EEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
Sbjct: 121 EEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE 153

[Close]

BLAST of CmoCh02G005600 vs. ExPASy TrEMBL
Match: A0A6J1L0H7 (uncharacterized protein LOC111499928 OS=Cucurbita maxima OX=3661 GN=LOC111499928 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.1e-73
Identity = 146/153 (95.42%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV 60
           MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVL KDPASFICNSDDMDFNDVV AV
Sbjct: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLQKDPASFICNSDDMDFNDVVNAV 60

Query: 61  DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRAVVFS 120
           DD+DELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRR VVFS
Sbjct: 61  DDEDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRPVVFS 120

Query: 121 EEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE 154
           EEELRKGPR+GVKKGT +GGSRKFTAKLCAIPE
Sbjct: 121 EEELRKGPRRGVKKGTRNGGSRKFTAKLCAIPE 153

[Close]

BLAST of CmoCh02G005600 vs. ExPASy TrEMBL
Match: A0A6J1I7K7 (uncharacterized protein LOC111470350 OS=Cucurbita maxima OX=3661 GN=LOC111470350 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 5.5e-54
Identity = 116/157 (73.89%), Postives = 134/157 (85.35%), Query Frame = 0


Query: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV 60
           MGICISSDS NV+TAKLIL+DGTLLE+SYPVKVS++LHK PA+FICNSDDMDF+D V AV
Sbjct: 1   MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAV 60

Query: 61  DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRA---- 120
            DDD LQLG LYFALPL++LN+PLH E+MAALAVKASSAL+KAG GG+EK GSRR     
Sbjct: 61  HDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSALIKAGAGGTEKSGSRRTAVSP 120

Query: 121 VVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE 154
           V FS+EE RK PR+G++KG+G G  RKF AKL AIPE
Sbjct: 121 VAFSDEEFRKPPRRGLQKGSGRG--RKFRAKLSAIPE 155

[Close]

BLAST of CmoCh02G005600 vs. ExPASy TrEMBL
Match: A0A6J1D8L2 (uncharacterized protein LOC111017924 OS=Momordica charantia OX=3673 GN=LOC111017924 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 9.3e-54
Identity = 120/157 (76.43%), Postives = 133/157 (84.71%), Query Frame = 0


Query: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV 60
           MGICISSDS NV+TAKLIL+DGTLLEYSYPVKVSYVL KDPASFICNSD+MDF+DVV+A+
Sbjct: 1   MGICISSDSTNVATAKLILTDGTLLEYSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAI 60

Query: 61  DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRAVV-- 120
           DD DELQLGQLYFALPL++LN+PLHAE+MAALAVKAS+ALMKAGG   EKCGSRR  +  
Sbjct: 61  DDGDELQLGQLYFALPLDRLNQPLHAEEMAALAVKASAALMKAGG---EKCGSRRTAISP 120

Query: 121 --FSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE 154
             FS+EE  K  R   KK  GSG  RKFTAKL AIPE
Sbjct: 121 ALFSDEEFGKVQRSVAKK--GSGRRRKFTAKLSAIPE 152

[Close]

BLAST of CmoCh02G005600 vs. ExPASy TrEMBL
Match: A0A6J1EJ90 (uncharacterized protein LOC111434966 OS=Cucurbita moschata OX=3662 GN=LOC111434966 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 7.9e-53
Identity = 115/157 (73.25%), Postives = 132/157 (84.08%), Query Frame = 0


Query: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV 60
           MGICISSDS NV+TAKLIL+DGTLLE+SYPVKVS++LHK PA+FICNSDDMDF+D V AV
Sbjct: 1   MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAV 60

Query: 61  DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRAVV-- 120
            DDD LQLG LYFALPL++LN+PLH E+MAALAVKASSAL+KAG GG+EK GSRR  V  
Sbjct: 61  HDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSALIKAGAGGTEKSGSRRTAVSP 120

Query: 121 --FSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE 154
             FS+EE RK P + ++K  GSGG RKF AKL AIPE
Sbjct: 121 LAFSDEEFRKPPGRSLQK--GSGGGRKFRAKLSAIPE 155

[Close]

BLAST of CmoCh02G005600 vs. NCBI nr
Match: XP_022947655.1 (uncharacterized protein LOC111451454 [Cucurbita moschata])

HSP 1 Score: 299.7 bits (766), Expect = 1.5e-77
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV 60
           MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV
Sbjct: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV 60

Query: 61  DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRAVVFS 120
           DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRAVVFS
Sbjct: 61  DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRAVVFS 120

Query: 121 EEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE 154
           EEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
Sbjct: 121 EEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE 153

[Close]

BLAST of CmoCh02G005600 vs. NCBI nr
Match: KAG6605242.1 (hypothetical protein SDJN03_02559, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035206.1 hypothetical protein SDJN02_02001, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 292.7 bits (748), Expect = 1.8e-75
Identity = 149/153 (97.39%), Postives = 150/153 (98.04%), Query Frame = 0


Query: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV 60
           MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPA+FICNSDDMDFNDVVTAV
Sbjct: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPATFICNSDDMDFNDVVTAV 60

Query: 61  DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRAVVFS 120
           DDDDELQLG LYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRR VVF 
Sbjct: 61  DDDDELQLGHLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRPVVFC 120

Query: 121 EEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE 154
           EEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE
Sbjct: 121 EEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE 153

[Close]

BLAST of CmoCh02G005600 vs. NCBI nr
Match: XP_023533314.1 (uncharacterized protein LOC111795245 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023533315.1 uncharacterized protein LOC111795245 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023533317.1 uncharacterized protein LOC111795245 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023533318.1 uncharacterized protein LOC111795245 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.7 bits (748), Expect = 1.8e-75
Identity = 150/153 (98.04%), Postives = 150/153 (98.04%), Query Frame = 0


Query: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV 60
           MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV
Sbjct: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV 60

Query: 61  DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRAVVFS 120
           DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRR VVF 
Sbjct: 61  DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRPVVFC 120

Query: 121 EEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE 154
           EEELRKGPRKGVKKGT SGGSRKFTAKLCAIPE
Sbjct: 121 EEELRKGPRKGVKKGTRSGGSRKFTAKLCAIPE 153

[Close]

BLAST of CmoCh02G005600 vs. NCBI nr
Match: XP_023007426.1 (uncharacterized protein LOC111499928 [Cucurbita maxima])

HSP 1 Score: 285.8 bits (730), Expect = 2.2e-73
Identity = 146/153 (95.42%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV 60
           MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVL KDPASFICNSDDMDFNDVV AV
Sbjct: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLQKDPASFICNSDDMDFNDVVNAV 60

Query: 61  DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRAVVFS 120
           DD+DELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRR VVFS
Sbjct: 61  DDEDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRPVVFS 120

Query: 121 EEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE 154
           EEELRKGPR+GVKKGT +GGSRKFTAKLCAIPE
Sbjct: 121 EEELRKGPRRGVKKGTRNGGSRKFTAKLCAIPE 153

[Close]

BLAST of CmoCh02G005600 vs. NCBI nr
Match: XP_038902080.1 (uncharacterized protein LOC120088720 [Benincasa hispida])

HSP 1 Score: 238.4 bits (607), Expect = 4.0e-59
Identity = 125/157 (79.62%), Postives = 141/157 (89.81%), Query Frame = 0


Query: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV 60
           MGIC+SSD+ NV+TAKLIL+DGTL+E+SYPVKVSY+L K PASFICNSD+MDF+DVV AV
Sbjct: 1   MGICVSSDAINVATAKLILTDGTLVEFSYPVKVSYILQKHPASFICNSDEMDFDDVVYAV 60

Query: 61  DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRA---- 120
           DDDDELQLGQLYFALPL++LN+PL AE+MAALAVKASSALMKAGGGG+EKCGSRR     
Sbjct: 61  DDDDELQLGQLYFALPLDRLNQPLQAEEMAALAVKASSALMKAGGGGTEKCGSRRTAISP 120

Query: 121 VVFSEEELRKGPRKGVKKGTGSGGSRKFTAKLCAIPE 154
           V FS+EE RKGPRKG+KK  GSG SRKFTAKL AIPE
Sbjct: 121 VTFSDEEFRKGPRKGLKK--GSGRSRKFTAKLSAIPE 155

[Close]

BLAST of CmoCh02G005600 vs. TAIR 10
Match: AT2G23690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 157.5 bits (397), Expect = 8.4e-39
Identity = 90/163 (55.21%), Postives = 112/163 (68.71%), Query Frame = 0


Query: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV 60
           MGIC S +S  V+TAKLIL DG ++E++ PVKV YVL K+P  FICNSDDMDF++VV+A+
Sbjct: 1   MGICSSYESTQVATAKLILHDGRMMEFTSPVKVGYVLQKNPMCFICNSDDMDFDNVVSAI 60

Query: 61  DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGG-GSEKCGSRR---- 120
             D+E QLGQLYFALPL  L+  L AE+MAALAVKASSALM++GG  G +KC  RR    
Sbjct: 61  SADEEFQLGQLYFALPLSSLHHSLKAEEMAALAVKASSALMRSGGSCGRDKCRCRRKCVS 120

Query: 121 AVVFSEEEL-----RKGPRKGVKKGTGSGGSRKFTAKLCAIPE 154
            V+FS   +         R G ++G G  G RK+ AKL  I E
Sbjct: 121 PVIFSARRVAAVGANGETRNGKRRGGGGSGRRKYAAKLSKIEE 163

[Close]

BLAST of CmoCh02G005600 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 144.8 bits (364), Expect = 5.6e-35
Identity = 86/162 (53.09%), Postives = 105/162 (64.81%), Query Frame = 0


Query: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV 60
           MGIC SS+S  V+TAKLIL DG ++E++ PVKV YVL K P  FICNSDDMDF+D V A+
Sbjct: 1   MGICSSSESTQVATAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAI 60

Query: 61  DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGG-SEKCGS------ 120
             D+ELQLGQ+YFALPL  L +PL AE+MAALAVKASSALM+ GGGG   KC        
Sbjct: 61  SADEELQLGQIYFALPLCWLRQPLKAEEMAALAVKASSALMRGGGGGCRRKCVEPIVSDK 120

Query: 121 -RRAVVFSEEELRKGP-RKGVKKGTGSGGSRKFTAKLCAIPE 154
            R  V   ++ +  G  R+ V+ G G G       + C   E
Sbjct: 121 LRMRVGSGDDTVGSGSGRRKVRNGDGGGSVSSSRRRKCYAAE 162

[Close]

BLAST of CmoCh02G005600 vs. TAIR 10
Match: AT3G50800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66580.1); Has 249 Blast hits to 249 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 141.0 bits (354), Expect = 8.1e-34
Identity = 85/156 (54.49%), Postives = 103/156 (66.03%), Query Frame = 0


Query: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV 60
           MG C S +S    TAKLIL DGTL E+S PVKV  +L K+P SF+CNSDDMDF+D V AV
Sbjct: 1   MGACASRESRRTETAKLILPDGTLQEFSTPVKVWQILQKNPTSFVCNSDDMDFDDAVLAV 60

Query: 61  DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRAVVFS 120
              ++L+ G+LYF LPL  LN PL A++MAALAVKASSAL K+GGGG     S       
Sbjct: 61  PGSEDLRPGELYFVLPLTWLNHPLRADEMAALAVKASSALAKSGGGGL----SYNDEDVG 120

Query: 121 EEELRKGPRKGV-KKGTGSGGS--RKFTAKLCAIPE 154
           E  +R+  R G   +G G GG   RKFTA+L +I E
Sbjct: 121 ECRVRRVKRNGCGGRGCGGGGKGRRKFTAELSSIAE 152

[Close]

BLAST of CmoCh02G005600 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 138.7 bits (348), Expect = 4.0e-33
Identity = 85/158 (53.80%), Postives = 102/158 (64.56%), Query Frame = 0


Query: 1   MGICISSDSPNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPASFICNSDDMDFNDVVTAV 60
           MG C S +S    +AKLIL DGTL E+S PVKV  +L K+P SF+CNSD+MDF+D V+AV
Sbjct: 1   MGACASRESLRSDSAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAV 60

Query: 61  DDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGGGSEKCGSRRAVVFS 120
             ++EL+ GQLYF LPL  LN PL AE+MAALAVKASSAL K+GG G         V  S
Sbjct: 61  AGNEELRSGQLYFVLPLTWLNHPLRAEEMAALAVKASSALTKSGGVG--WVSGDDDVTTS 120

Query: 121 EEELRKGPRKGVKKGTGSG-----GSRKFTAKLCAIPE 154
           E+  +K    GVK   G G     G R+FTA L  I E
Sbjct: 121 EKTYQKKNIAGVKTNGGGGRGCGKGKRRFTANLSTIAE 156

[Close]

BLAST of CmoCh02G005600 vs. TAIR 10
Match: AT1G76600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 3.4e-16
Identity = 51/129 (39.53%), Postives = 73/129 (56.59%), Query Frame = 0


Query: 1   MGICISSDS----PNVSTAKLILSDGTLLEYSYPVKVSYVLHKDPAS----------FIC 60
           MG+C+S +      + +TAK++  +G L EY  PV  S VL  +  S          F+C
Sbjct: 1   MGLCVSVNRNEYVSSSTTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLC 60

Query: 61  NSDDMDFNDVVTAVDDDDELQLGQLYFALPLEKLNKPLHAEDMAALAVKASSALMKAGGG 116
           NSD + ++D + A++ D+ LQ  Q+YF LP+ K    L A DMAALAVKAS A+ KA G 
Sbjct: 61  NSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKAAGK 120

The following BLAST results are available for this feature:

BLAST of CmoCh02G005600 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh02G005600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7I2	7.1e-78	100.00	uncharacterized protein LOC111451454 OS=Cucurbita moschata OX=3662 GN=LOC1114514...	[more]
A0A6J1L0H7	1.1e-73	95.42	uncharacterized protein LOC111499928 OS=Cucurbita maxima OX=3661 GN=LOC111499928...	[more]
A0A6J1I7K7	5.5e-54	73.89	uncharacterized protein LOC111470350 OS=Cucurbita maxima OX=3661 GN=LOC111470350...	[more]
A0A6J1D8L2	9.3e-54	76.43	uncharacterized protein LOC111017924 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1EJ90	7.9e-53	73.25	uncharacterized protein LOC111434966 OS=Cucurbita moschata OX=3662 GN=LOC1114349...	[more]

BLAST of CmoCh02G005600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947655.1	1.5e-77	100.00	uncharacterized protein LOC111451454 [Cucurbita moschata]	[more]
KAG6605242.1	1.8e-75	97.39	hypothetical protein SDJN03_02559, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023533314.1	1.8e-75	98.04	uncharacterized protein LOC111795245 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_023007426.1	2.2e-73	95.42	uncharacterized protein LOC111499928 [Cucurbita maxima]	[more]
XP_038902080.1	4.0e-59	79.62	uncharacterized protein LOC120088720 [Benincasa hispida]	[more]

BLAST of CmoCh02G005600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23690.1	8.4e-39	55.21	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT4G37240.1	5.6e-35	53.09	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT3G50800.1	8.1e-34	54.49	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G66580.1	4.0e-33	53.80	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G76600.1	3.4e-16	39.53	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..142 e-value: 6.1E-25 score: 88.7
None	No IPR available	PANTHER	PTHR33052:SF128	HTH-TYPE TRANSCRIPTIONAL REGULATOR	coord: 1..153
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G005600.1	CmoCh02G005600.1	mRNA