CmoCh02G005550 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATAAACCAAAACAGAGAGAAAAAAAAAGAAAAGAAGAAGAAGCCATTGAGCCCTCCGACGAGGCCACTCCTCCGTTCATCCCCGGCCACGGGGCTCTGTCGGGGATTCCACCCAAACCCACATCCACCATGTCCGAATCCTACGCGCCTCCGCCACCGCCCCGCAAGCCAAGGTTCGTCCCGACGGCTCTGTACAAGCAGCGATCCTGGTCGCCGGACGCATCAAGAGAGGAGGCGTGGCAGAGGCAGAAGGGGAGAAGCAAGAAAGGAAGAAGCCGGAGCGTGACGGCGGAGGATCTGGACGAGTTAAAGGCCTGTCTCGAGTTGGGTTTCGAGTTCGACTCGTCCGAGTTAGACACCCGACTCTCCAATACCTTACCGGCTTTGGAACTGTATCACGCCGTCAATAAAAGCTACTCCGATTCCATCTCCAAGTCCACCGCTACGACGGCGGTTTCATCCCCCGACCGTGATTCCGTCAATTCTCCTTCCCCTCTCGGCAGCCCCCTTGCCATCCTCGGCTCCTCCGGTAGCCTTCAATTTCATGCTTTATTTTTTATTTATATTTAATTGTAGAAGTGAATCTAACCGAATTTGTTTGATGGAAATGAAAAGGAAAAAATCCACAGGCGGTGAAGACAAAGCTCCGACAGTGGGCTCAAGTGGTCGCCTGTTCGGTCAGAAACTCCTCAACCTAAGTCCGGTTAATTCTAAACTAAACCATAGTTAGTCAAAAGAAGAATGGACGTCACCGTTCACCCACCACCGCCAGTATGATTACTGTTTGAATTATGAATACAATTTTGGTGATTGTTTTTGTTTTAGAGGAGTTTTATATAATATATAATTATTATATGCAAAAATGGAGAGACAAAAAGAAAAGGAAAAAGAAAAAAGAAGAAGAAAACAGTGGTGGGTGTTATTTTGTGTTTGAACTTTTTTGTTTTTTTACTAGGTTTCTGTTTGAATTCTGTTGTTAAAAGGTCAAAACTTTGGTGGGTGTCCTTTTTTCTTGGATATGATTTCATCTTCTTCCAGGTTCTTCAAACACTTTTGGGTAAGTGATTGTTGATTTAGGTTTGATGCGCCAATTATCTCAAACTTTGTTCTACCATGTTTGCTTTCGGCTCAACAAATATGGAAAAAATCAATATATGTATCTTTGTTCGGCCCATGCTCTCTTTTTCTAGCTATGTCACTTGAGTTGTCAAGAATAAATTGCCCTAGGATTGCTCCAACGTTTAGCTTTGGAATTTCTGGGATTGAGTCATCGAAAAAGAAACTGCATCTTGATTACAAATTTGGGTAGTGAGGTGTTACAAATGGTATTAGATCGGGACCTCTCCTAATACGATGTGGTTTCGAGGATGAACCAATGCGAAATGATGCGTTCTTTCTAGAGTCTACAATTGTGAAGTCGGGACATCCAACTACTGATGTTCCATCTATAGTGTAGATATATCCGAATAAGATATTGCTACCGTCTACATTTTCACTATGATCAATATCCATAAAACATA AAATAAACCAAAACAGAGAGAAAAAAAAAGAAAAGAAGAAGAAGCCATTGAGCCCTCCGACGAGGCCACTCCTCCGTTCATCCCCGGCCACGGGGCTCTGTCGGGGATTCCACCCAAACCCACATCCACCATGTCCGAATCCTACGCGCCTCCGCCACCGCCCCGCAAGCCAAGGTTCGTCCCGACGGCTCTGTACAAGCAGCGATCCTGGTCGCCGGACGCATCAAGAGAGGAGGCGTGGCAGAGGCAGAAGGGGAGAAGCAAGAAAGGAAGAAGCCGGAGCGTGACGGCGGAGGATCTGGACGAGTTAAAGGCCTGTCTCGAGTTGGGTTTCGAGTTCGACTCGTCCGAGTTAGACACCCGACTCTCCAATACCTTACCGGCTTTGGAACTGTATCACGCCGTCAATAAAAGCTACTCCGATTCCATCTCCAAGTCCACCGCTACGACGGCGGTTTCATCCCCCGACCGTGATTCCGTCAATTCTCCTTCCCCTCTCGGCAGCCCCCTTGCCATCCTCGGCTCCTCCGGAAAAAATCCACAGGCGGTGAAGACAAAGCTCCGACAGTGGGCTCAAGTGGTCGCCTGTTCGGTCAGAAACTCCTCAACCTAAGTCCGGTTAATTCTAAACTAAACCATAGTTAGTCAAAAGAAGAATGGACGTCACCGTTCACCCACCACCGCCAGTATGATTACTGTTTGAATTATGAATACAATTTTGGTGATTGTTTTTGTTTTAGAGGAGTTTTATATAATATATAATTATTATATGCAAAAATGGAGAGACAAAAAGAAAAGGAAAAAGAAAAAAGAAGAAGAAAACAGTGGTGGGTGTTATTTTGTGTTTGAACTTTTTTGTTTTTTTACTAGGTTTCTGTTTGAATTCTGTTGTTAAAAGGTCAAAACTTTGGTGGGTGTCCTTTTTTCTTGGATATGATTTCATCTTCTTCCAGGTTCTTCAAACACTTTTGGGTAAGTGATTGTTGATTTAGGTTTGATGCGCCAATTATCTCAAACTTTGTTCTACCATGTTTGCTTTCGGCTCAACAAATATGGAAAAAATCAATATATGTATCTTTGTTCGGCCCATGCTCTCTTTTTCTAGCTATGTCACTTGAGTTGTCAAGAATAAATTGCCCTAGGATTGCTCCAACGTTTAGCTTTGGAATTTCTGGGATTGAGTCATCGAAAAAGAAACTGCATCTTGATTACAAATTTGGGTAGTGAGGTGTTACAAATGGTATTAGATCGGGACCTCTCCTAATACGATGTGGTTTCGAGGATGAACCAATGCGAAATGATGCGTTCTTTCTAGAGTCTACAATTGTGAAGTCGGGACATCCAACTACTGATGTTCCATCTATAGTGTAGATATATCCGAATAAGATATTGCTACCGTCTACATTTTCACTATGATCAATATCCATAAAACATA ATGTCCGAATCCTACGCGCCTCCGCCACCGCCCCGCAAGCCAAGGTTCGTCCCGACGGCTCTGTACAAGCAGCGATCCTGGTCGCCGGACGCATCAAGAGAGGAGGCGTGGCAGAGGCAGAAGGGGAGAAGCAAGAAAGGAAGAAGCCGGAGCGTGACGGCGGAGGATCTGGACGAGTTAAAGGCCTGTCTCGAGTTGGGTTTCGAGTTCGACTCGTCCGAGTTAGACACCCGACTCTCCAATACCTTACCGGCTTTGGAACTGTATCACGCCGTCAATAAAAGCTACTCCGATTCCATCTCCAAGTCCACCGCTACGACGGCGGTTTCATCCCCCGACCGTGATTCCGTCAATTCTCCTTCCCCTCTCGGCAGCCCCCTTGCCATCCTCGGCTCCTCCGGAAAAAATCCACAGGCGGTGAAGACAAAGCTCCGACAGTGGGCTCAAGTGGTCGCCTGTTCGGTCAGAAACTCCTCAACCTAA MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDELKACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVNSPSPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST Homology
BLAST of CmoCh02G005550 vs. ExPASy TrEMBL
Match: A0A6J1G638 (uncharacterized protein LOC111451175 OS=Cucurbita moschata OX=3662 GN=LOC111451175 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 2.1e-80 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of CmoCh02G005550 vs. ExPASy TrEMBL
Match: A0A6J1L6N5 (uncharacterized protein LOC111499661 OS=Cucurbita maxima OX=3661 GN=LOC111499661 PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 1.8e-79 Identity = 158/160 (98.75%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of CmoCh02G005550 vs. ExPASy TrEMBL
Match: A0A0A0LJJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277000 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 2.0e-62 Identity = 130/161 (80.75%), Postives = 143/161 (88.82%), Query Frame = 0
BLAST of CmoCh02G005550 vs. ExPASy TrEMBL
Match: A0A5A7TQF7 (Membrane insertase YidC OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G003150 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 4.5e-59 Identity = 127/163 (77.91%), Postives = 142/163 (87.12%), Query Frame = 0
BLAST of CmoCh02G005550 vs. ExPASy TrEMBL
Match: A0A1S3C5W7 (uncharacterized protein LOC103497396 OS=Cucumis melo OX=3656 GN=LOC103497396 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 4.5e-59 Identity = 127/163 (77.91%), Postives = 142/163 (87.12%), Query Frame = 0
BLAST of CmoCh02G005550 vs. NCBI nr
Match: XP_022947253.1 (uncharacterized protein LOC111451175 [Cucurbita moschata]) HSP 1 Score: 308.1 bits (788), Expect = 4.3e-80 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of CmoCh02G005550 vs. NCBI nr
Match: XP_023521262.1 (uncharacterized protein LOC111785010 [Cucurbita pepo subsp. pepo] >XP_023521263.1 uncharacterized protein LOC111785011 [Cucurbita pepo subsp. pepo] >XP_023532572.1 uncharacterized protein LOC111794695 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 307.0 bits (785), Expect = 9.6e-80 Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of CmoCh02G005550 vs. NCBI nr
Match: XP_023007058.1 (uncharacterized protein LOC111499661 [Cucurbita maxima]) HSP 1 Score: 305.1 bits (780), Expect = 3.7e-79 Identity = 158/160 (98.75%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of CmoCh02G005550 vs. NCBI nr
Match: KAG6605237.1 (hypothetical protein SDJN03_02554, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035201.1 hypothetical protein SDJN02_01996 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 303.5 bits (776), Expect = 1.1e-78 Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0
BLAST of CmoCh02G005550 vs. NCBI nr
Match: XP_004149707.1 (uncharacterized protein LOC101213862 [Cucumis sativus] >KGN61958.1 hypothetical protein Csa_006277 [Cucumis sativus]) HSP 1 Score: 248.4 bits (633), Expect = 4.1e-62 Identity = 130/161 (80.75%), Postives = 143/161 (88.82%), Query Frame = 0
BLAST of CmoCh02G005550 vs. TAIR 10
Match: AT4G33985.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 129.4 bits (324), Expect = 2.6e-30 Identity = 80/164 (48.78%), Postives = 108/164 (65.85%), Query Frame = 0
BLAST of CmoCh02G005550 vs. TAIR 10
Match: AT3G50350.2 (Protein of unknown function (DUF1685) ) HSP 1 Score: 119.4 bits (298), Expect = 2.6e-27 Identity = 73/142 (51.41%), Postives = 92/142 (64.79%), Query Frame = 0
BLAST of CmoCh02G005550 vs. TAIR 10
Match: AT2G15590.2 (Protein of unknown function (DUF1685) ) HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22 Identity = 69/161 (42.86%), Postives = 100/161 (62.11%), Query Frame = 0
BLAST of CmoCh02G005550 vs. TAIR 10
Match: AT3G50350.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 95.9 bits (237), Expect = 3.1e-20 Identity = 61/116 (52.59%), Postives = 76/116 (65.52%), Query Frame = 0
BLAST of CmoCh02G005550 vs. TAIR 10
Match: AT2G15590.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 85.9 bits (211), Expect = 3.2e-17 Identity = 51/107 (47.66%), Postives = 73/107 (68.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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