CmoCh02G004860 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAATGCTAATTGTTGCTAAATATCTCAGACCCATCTCAGGAACACTCCAAATTAGATCTTCTTTGTCTTATTAACGCTCATGATCGAGATTCTTTCCGCGCGCTCCTCTCATTTCTTCCTCTCTCTCTCGCTCTACTAGCGAATCAATTGTCGTTGTGTCTGTCAGAAATCTGAGCTTACCGCGATGACAATGGCGGGTAAGCCCCCATTGGCTTCCAATAGGGCAACAGATCCTTTTCGACGAGACCCATTTGTGTTCTCCTCGGCTTCAATTCCTTCGAAGCCCATTTCCCTTTTTTTCCCTCTCAATAACCCAAATCCGCAGAATTTCTTTTGTTTGAAGCAGGCGCTGCCATTCAGTTCGCGATTAACCTTGCCGCACCGCCGTCTTTCTCCGGTCTCCGCCTCGGAATCCGACGTCCCTCAATCACATCACCAGGTAGCTCCTCTCACTGGCTGCTGTATACTATATTGGCCAGATTTTGATGATTTCTGTTCTTTTTATCCGACTTGATCAATGGGGATTTCAATGCGCCATCATATTTGCTATAATGATAGGATGTGGTTTTGGTCTGTGGCATGTGTTGTTAGGAATTACGACTCCCCATAATTGTATGATATTGTCCACTTTGATCATAAGCTCTCGTTACTTTGCTTTGGGCTTTCCCAAGAGGTCTCGTACTAATGGAGATGTATTCCTTGTTTGTAAACTCATGATCATTCCCTAAATATTCCTTAAATTAGCCAACGTGGGACTCCCTCCCCAACCATCTTCAACAATCCTCCCCTCGAACAAAGTACACTATAGAGCCTCCCCAGAGGCCTATAGAGCCCTCGAACAACCTCTCCTTAATCGAGGCTCGACTACTTCTCTAGAGTCCTCGAACAAAGTACTCCATTTGTTCGACATTTTGGGTCACTTTGGGCTACACCTTCAAGGCTCACTTGTGAGGTTCTGTTGACATGACTAAGTTAAGGGCATGACTCTAATACCATGTTAGGAATCACGACCTCCACAATGGTATGATATTGTCCACTTTTAGCATAAATTCTCACGGTTTTGCTTTTGATTTTCCCAAAAGACCTCATACTCAAGTAGAAACATCAATTTCTGAAAATTTTCTATGGAATGATCGATTGAGTATGAGAAGTGCTCAATTGCTGCTGTGTTATATTGTTTGTAATTCTTAAATGCTATCTTCATTTATTATCATGATCAGGAACTTCATTAGCAATAAAATACAATGGTTAGCGATCATGATCAAGTTTTGGAATGACCAAGCAGATCCTTATATATAATGATTTTTGTACTCACGTTTTCACTTTTAAAATTGTGAAAGGGATCTGAGACCTTAAGGGACAGCAAAAGGCTTGAGGAATGGAGTTCATTGACAGCAAAGTTCTCTGCAGCAGCAAATATCCCTTTTATGTTGCTACAATTGCCTCAGATTATCCTTAACGCCCGAAACCTTTTATCTGGAAACGAAACCGCGCTTTTGGCAGTTCCATGGCTGGTAAAAACTACTTCCATTCATAATTCAAGCTGTTTATAGAGAATGGACATTGACAATAATGTTTCGTGTCATGCGCGTTAATGTTTCGTGTTTCAAAGATAATTTGTGTGTTCTTCTTTCACTTTCTTATACATGTAGGGGATGTTAACTGGTTTGCTTGGGAACCTTGCATTGTTGTCATACTTTGCGAAGAAGAGGGAGAAGGAGGCCATGTTAATTCAAACATTAGGAGTAGTTACAACATATATAGTTTTTGCTCAGCTTGCAATAGCAGGGGCCATGCCCTTGCCTTACTTTGCAGCCACGTCGGCGGTCGTGGCTTCTGGTCTTGTTATAAACTTCATGAGTTTCTTTAATGTTCTTCCTGTTCTAATCTTGAAATTTTGGGAAGATTTCATCACTGTTGGTGGATTTTCTGTCCTCCCCCAGGTAATGTCTTTTCTAGCTTAGCTTCGTTCATAAAACGATAACGTTTAATATTAAGAATTGTCTCGAAGAGATGAAGTTTTGGGTTTGCTTAATTTTCGTGCAGGTTATGTGGTCTACTTTTGTTCCGTTCATACCGAATAGTATCTTGCCTGGAATCATTGCTTTGGTTGCTGCACTTCTTGCGGTTGCTTTGGTAGACTTTTTCTTGCCTATATTTTCCTTTGAGTTCATATGCTAATTCATTCAATGAAATATGTCTGCACAAAATCTTAGAGGGTTAGTTCATGGTCTCTATACTTCGTTAACAAGTTTGTGCACGTTTATCTTATGTGATTAGACAAGCGTTTATCTTAAGATCGCTTACCCTTCCTATTTATAACCAAGTCCCCTGACTAATTGCACACACTGGCTTCACCAATGTTGTAATAGCTCAAGCTCACCGCTAGCAGATATTGTCTTCTTTGGACTTTCCCTCAAGTTTTTTAAAATGCATCTGCTAGGGAGAGGTTTCTACACCCTTATAAAGAATGTTCGTTCCCCTCTCCAACCGATGTGGGATCTCACAATCCATCCCCCTTTGGGGCCCAACGTCCTCGTTGGACTCGTTTCCCTCCCCAATCGATGTGGGATCTCACAATCCACCCCCCCTTCGGGGCTCAGTGTCCTCGCTAGCACACTGCCCAGTGTCCACCCCCTTTCGGGGCCCAGAGTCCTCGTTGGCACATCGCCCAATGTCTGGCTCCGATACCATTTGTAACAGCCCAAACCCACCGCTAGCAAATATTGTCCTCTTTGGGCTATCTCTTTCGGGTTTTCTCCCAAGGTTTTTTAAAACGTGTTTGCCAGAGAGAGGTTTCCACATCCTTATAAAGAATGTTTCGTTCTCCTTTCCAACCGGTGTGGGATCTCACAATTTGATAACATTTATGTTTCTCATTGTGAGATCCCACATCGGTTGCAGAGGGGAACAAAATATTCTTTATAAGGGGTATGGAAACCTCTCCCTAGCAGAAAACCTTGAGAGAAAGTCCGAAAGGGATTGCCCAAAGAAGACAATATTTGCTAGCGGTGAGCTTGAGATGTTACAAATGTTCTACCAATATCCCTAATATATTCCCTTCTAGTACTCTCACATCACACTCCCTATTTTGGCTATATTCTTCTCTTTCTGATGACAACTTTTCTTATGTGTATATGATCATAAAAATGGTATAGTTCGAGTTTGAGATCTGAAACCAAGATTACAATATTTTCTTTTCATGTTGCTGAAATGTTAGACTTGTTCAACATTCCCTTAAAGGTGTTCTTTTAAGATTTACAGGCACGCACTGGAAAACTTCCTGAAAAAGGTGTCAAATTTGTTGGAGCATTATCTGGATGGACAGCAACACTCCTCTTCATGTGGATGCCGGTTTCACAATTGGTATTTTTCCTGTTTGAACTTTTGGTATGATATAAACATATACAAATGTATTAGAGTTAGATGGTTGGCTCGTGAGAATAGTCGAGATATATGATAGTTAGCTTGAACACTTACGGATATTACCTCTCACCACCATATGTTGTCTGTTCAGTGGACTAATTATCTGAATCCTGAGAACATCAAAGGCTTATCAGCTCTTACAATGCTTCTTGCCCTGATTGGAAATGGTCTTACGCTCCCACGTGCTCTATTCATTCGAGACTTCATGTGGTAACGTTATTTCCCCACAATCAAACCTTTCACGTCTGTTTTCTAGTCGTTATTTTGTTTTCAATCGACTTGTTTAGGGTCTGGCTTTATAATTGAACCACACAAATATTTGTTAAAACATAATCTTCATTTTTAGTACAGATGTGTTGTTCTCATTGTAAAACTGTGTCAATGTCACCTGTCAATAAGAGAAAGAAACCAAAGAACAACTACGTCTTGCATATTATGAAAACAGGTCTAACCAACACATAATCCGTGTGATGTTTTGGCCCTCGGGTTGTTAATGTGAGATCCTGTATTGGTTGGAGAGGGGAACGAAATATACTTTATTAGAGACCCTAACAGACGCGTTTTAAAATCTTGCGGGGAAGCCCGGAAGGGAAAGTCCAAAGAGAACAATATCTGCTGAGAGCCAGACACTAGGTAGTGTGCCAGCGAGCATGTTGGGCCCTAAGGGGGTGGATTGTGAGATCTCACATTGGTTATTGGTTGGAGAGGAGAATGAAATATACTTTATAAGCAAAACCTCTCCCTAATAGACGCATTTTAAAACCTTGAGGGGAAGCCCAGAAGGGAAAGTCAAAATAGGACAATATCTCGTGAGAGCCAGACACTGGGGAGTGGGCCAGCGAGGATGCTAGGCCCCAAGGGGTGGTTTGTGGGATCCCACGTTGGTTGGAGAGGGGAACGAAAGGGAAACCTCTCCCTAACATAAGCGTTTTAAAACCTTGAGTGGAAGTCTGGAAAGGAAAGTCCATAGAAGACAATATCTGCTAGCGGTGGGCTTGAGCTATTACAGTTACCCACGACGGCACCAGTCTTGATTAGCTTATCTATATTAGTTGGTTCAAACTGAAATTGCAGGTTCTTGGGTTCGAGTTGGGCTGTTTTGTTTTACGGATACGCCAACATTGTATGCTTGTACTGGTAAGCTGCTCATCATTTTGTTGTTACATCTGCATTTGTGTGGCCTTAGTATGAGTTAATTGTATGTCTTTATTGATCCCACAGCTGCAGCGGCGTGAGCAGGGAGTTCTTCATTGCTGCAACTGCTGGTCTTTTCTCTTGGATAGGTTCTTCTTCCATTCATTTCTGGCTGCCATATTCTTCTCCTTTTTCACAAACTGCCACTGAGATAGCTGTTTATATTATTTGTTTGTTTGATAATGTTCTCGTTTCTCGTTTCTGCATGATTTAGAAACAACACTTGTAGTGGTTTCTTTCTTATTGTTTTTTTTTTTTTTTTGGTAGGTTTTTTCATCTGGAGAGACTCTGAGGCATATGGATTCCAATCACCATTAATGTCTATTAAGGAGCTACTTTTTGGATCATGACTGCCTTGTTCGAGCTTGAAGAGAGCGAGCGAGATTTTAAGGTTCGAGACAAATGCAATTTAAAATCAAATCTGAACTCAAGGGCTTTGTTTGATGGCTGCAAACCGTGGTTTGAATATAGCTCAAGCAAGAACAGTGTTGTGAAGAGGGAAAAAAGTAAGCTCCGTAGGCTATGGAGAGAGCCAAGTTATTTTTTTTTTGTACATATTATGCTTTGAAAAAATATGCATAGCTTTCTTGTATATTATGACTGAAATATGTTGAGCTAATAAAATCATTCTTTATTGTCATGGTGTACGGGCGAGTGATTTTAGCGAAAATGATTTGTTTATAAGCGAT GAAATGCTAATTGTTGCTAAATATCTCAGACCCATCTCAGGAACACTCCAAATTAGATCTTCTTTGTCTTATTAACGCTCATGATCGAGATTCTTTCCGCGCGCTCCTCTCATTTCTTCCTCTCTCTCTCGCTCTACTAGCGAATCAATTGTCGTTGTGTCTGTCAGAAATCTGAGCTTACCGCGATGACAATGGCGGGTAAGCCCCCATTGGCTTCCAATAGGGCAACAGATCCTTTTCGACGAGACCCATTTGTGTTCTCCTCGGCTTCAATTCCTTCGAAGCCCATTTCCCTTTTTTTCCCTCTCAATAACCCAAATCCGCAGAATTTCTTTTGTTTGAAGCAGGCGCTGCCATTCAGTTCGCGATTAACCTTGCCGCACCGCCGTCTTTCTCCGGTCTCCGCCTCGGAATCCGACGTCCCTCAATCACATCACCAGGGATCTGAGACCTTAAGGGACAGCAAAAGGCTTGAGGAATGGAGTTCATTGACAGCAAAGTTCTCTGCAGCAGCAAATATCCCTTTTATGTTGCTACAATTGCCTCAGATTATCCTTAACGCCCGAAACCTTTTATCTGGAAACGAAACCGCGCTTTTGGCAGTTCCATGGCTGGGGATGTTAACTGGTTTGCTTGGGAACCTTGCATTGTTGTCATACTTTGCGAAGAAGAGGGAGAAGGAGGCCATGTTAATTCAAACATTAGGAGTAGTTACAACATATATAGTTTTTGCTCAGCTTGCAATAGCAGGGGCCATGCCCTTGCCTTACTTTGCAGCCACGTCGGCGGTCGTGGCTTCTGGTCTTGTTATAAACTTCATGAGTTTCTTTAATGTTCTTCCTGTTCTAATCTTGAAATTTTGGGAAGATTTCATCACTGTTGGTGGATTTTCTGTCCTCCCCCAGGTTATGTGGTCTACTTTTGTTCCGTTCATACCGAATAGTATCTTGCCTGGAATCATTGCTTTGGTTGCTGCACTTCTTGCGGTTGCTTTGGCACGCACTGGAAAACTTCCTGAAAAAGGTGTCAAATTTGTTGGAGCATTATCTGGATGGACAGCAACACTCCTCTTCATGTGGATGCCGGTTTCACAATTGTGGACTAATTATCTGAATCCTGAGAACATCAAAGGCTTATCAGCTCTTACAATGCTTCTTGCCCTGATTGGAAATGGTCTTACGCTCCCACGTGCTCTATTCATTCGAGACTTCATGTGGTTCTTGGGTTCGAGTTGGGCTGTTTTGTTTTACGGATACGCCAACATTGTATGCTTGTACTGCTGCAGCGGCGTGAGCAGGGAGTTCTTCATTGCTGCAACTGCTGGTCTTTTCTCTTGGATAGGTTTTTTCATCTGGAGAGACTCTGAGGCATATGGATTCCAATCACCATTAATGTCTATTAAGGAGCTACTTTTTGGATCATGACTGCCTTGTTCGAGCTTGAAGAGAGCGAGCGAGATTTTAAGGTTCGAGACAAATGCAATTTAAAATCAAATCTGAACTCAAGGGCTTTGTTTGATGGCTGCAAACCGTGGTTTGAATATAGCTCAAGCAAGAACAGTGTTGTGAAGAGGGAAAAAAGTAAGCTCCGTAGGCTATGGAGAGAGCCAAGTTATTTTTTTTTTGTACATATTATGCTTTGAAAAAATATGCATAGCTTTCTTGTATATTATGACTGAAATATGTTGAGCTAATAAAATCATTCTTTATTGTCATGGTGTACGGGCGAGTGATTTTAGCGAAAATGATTTGTTTATAAGCGAT ATGACAATGGCGGGTAAGCCCCCATTGGCTTCCAATAGGGCAACAGATCCTTTTCGACGAGACCCATTTGTGTTCTCCTCGGCTTCAATTCCTTCGAAGCCCATTTCCCTTTTTTTCCCTCTCAATAACCCAAATCCGCAGAATTTCTTTTGTTTGAAGCAGGCGCTGCCATTCAGTTCGCGATTAACCTTGCCGCACCGCCGTCTTTCTCCGGTCTCCGCCTCGGAATCCGACGTCCCTCAATCACATCACCAGGGATCTGAGACCTTAAGGGACAGCAAAAGGCTTGAGGAATGGAGTTCATTGACAGCAAAGTTCTCTGCAGCAGCAAATATCCCTTTTATGTTGCTACAATTGCCTCAGATTATCCTTAACGCCCGAAACCTTTTATCTGGAAACGAAACCGCGCTTTTGGCAGTTCCATGGCTGGGGATGTTAACTGGTTTGCTTGGGAACCTTGCATTGTTGTCATACTTTGCGAAGAAGAGGGAGAAGGAGGCCATGTTAATTCAAACATTAGGAGTAGTTACAACATATATAGTTTTTGCTCAGCTTGCAATAGCAGGGGCCATGCCCTTGCCTTACTTTGCAGCCACGTCGGCGGTCGTGGCTTCTGGTCTTGTTATAAACTTCATGAGTTTCTTTAATGTTCTTCCTGTTCTAATCTTGAAATTTTGGGAAGATTTCATCACTGTTGGTGGATTTTCTGTCCTCCCCCAGGTTATGTGGTCTACTTTTGTTCCGTTCATACCGAATAGTATCTTGCCTGGAATCATTGCTTTGGTTGCTGCACTTCTTGCGGTTGCTTTGGCACGCACTGGAAAACTTCCTGAAAAAGGTGTCAAATTTGTTGGAGCATTATCTGGATGGACAGCAACACTCCTCTTCATGTGGATGCCGGTTTCACAATTGTGGACTAATTATCTGAATCCTGAGAACATCAAAGGCTTATCAGCTCTTACAATGCTTCTTGCCCTGATTGGAAATGGTCTTACGCTCCCACGTGCTCTATTCATTCGAGACTTCATGTGGTTCTTGGGTTCGAGTTGGGCTGTTTTGTTTTACGGATACGCCAACATTGTATGCTTGTACTGCTGCAGCGGCGTGAGCAGGGAGTTCTTCATTGCTGCAACTGCTGGTCTTTTCTCTTGGATAGGTTTTTTCATCTGGAGAGACTCTGAGGCATATGGATTCCAATCACCATTAATGTCTATTAAGGAGCTACTTTTTGGATCATGA MTMAGKPPLASNRATDPFRRDPFVFSSASIPSKPISLFFPLNNPNPQNFFCLKQALPFSSRLTLPHRRLSPVSASESDVPQSHHQGSETLRDSKRLEEWSSLTAKFSAAANIPFMLLQLPQIILNARNLLSGNETALLAVPWLGMLTGLLGNLALLSYFAKKREKEAMLIQTLGVVTTYIVFAQLAIAGAMPLPYFAATSAVVASGLVINFMSFFNVLPVLILKFWEDFITVGGFSVLPQVMWSTFVPFIPNSILPGIIALVAALLAVALARTGKLPEKGVKFVGALSGWTATLLFMWMPVSQLWTNYLNPENIKGLSALTMLLALIGNGLTLPRALFIRDFMWFLGSSWAVLFYGYANIVCLYCCSGVSREFFIAATAGLFSWIGFFIWRDSEAYGFQSPLMSIKELLFGS Homology
BLAST of CmoCh02G004860 vs. ExPASy Swiss-Prot
Match: Q9LF50 (Maltose excess protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEX1 PE=2 SV=2) HSP 1 Score: 459.5 bits (1181), Expect = 3.9e-128 Identity = 237/394 (60.15%), Postives = 295/394 (74.87%), Query Frame = 0
BLAST of CmoCh02G004860 vs. ExPASy Swiss-Prot
Match: Q7XTQ5 (Maltose excess protein 1-like, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0602400 PE=2 SV=2) HSP 1 Score: 455.3 bits (1170), Expect = 7.4e-127 Identity = 229/357 (64.15%), Postives = 283/357 (79.27%), Query Frame = 0
BLAST of CmoCh02G004860 vs. ExPASy TrEMBL
Match: A0A6J1G7C8 (maltose excess protein 1-like, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451430 PE=4 SV=1) HSP 1 Score: 802.7 bits (2072), Expect = 7.0e-229 Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0
BLAST of CmoCh02G004860 vs. ExPASy TrEMBL
Match: A0A6J1L1D3 (maltose excess protein 1-like, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111499523 PE=4 SV=1) HSP 1 Score: 785.8 bits (2028), Expect = 8.8e-224 Identity = 403/412 (97.82%), Postives = 405/412 (98.30%), Query Frame = 0
BLAST of CmoCh02G004860 vs. ExPASy TrEMBL
Match: A0A0A0LQS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G431130 PE=4 SV=1) HSP 1 Score: 698.0 bits (1800), Expect = 2.4e-197 Identity = 356/413 (86.20%), Postives = 377/413 (91.28%), Query Frame = 0
BLAST of CmoCh02G004860 vs. ExPASy TrEMBL
Match: A0A6J1JGC5 (maltose excess protein 1-like, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484255 PE=4 SV=1) HSP 1 Score: 684.9 bits (1766), Expect = 2.1e-193 Identity = 353/411 (85.89%), Postives = 371/411 (90.27%), Query Frame = 0
BLAST of CmoCh02G004860 vs. ExPASy TrEMBL
Match: A0A6J1FTY9 (maltose excess protein 1-like, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448421 PE=4 SV=1) HSP 1 Score: 674.5 bits (1739), Expect = 2.9e-190 Identity = 348/411 (84.67%), Postives = 368/411 (89.54%), Query Frame = 0
BLAST of CmoCh02G004860 vs. NCBI nr
Match: XP_022947624.1 (maltose excess protein 1-like, chloroplastic [Cucurbita moschata] >KAG6605168.1 Maltose excess protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 802.7 bits (2072), Expect = 1.4e-228 Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0
BLAST of CmoCh02G004860 vs. NCBI nr
Match: KAG7035159.1 (Maltose excess protein 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 800.4 bits (2066), Expect = 7.1e-228 Identity = 411/412 (99.76%), Postives = 411/412 (99.76%), Query Frame = 0
BLAST of CmoCh02G004860 vs. NCBI nr
Match: XP_023534037.1 (maltose excess protein 1-like, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 791.6 bits (2043), Expect = 3.3e-225 Identity = 405/412 (98.30%), Postives = 407/412 (98.79%), Query Frame = 0
BLAST of CmoCh02G004860 vs. NCBI nr
Match: XP_023006855.1 (maltose excess protein 1-like, chloroplastic [Cucurbita maxima]) HSP 1 Score: 785.8 bits (2028), Expect = 1.8e-223 Identity = 403/412 (97.82%), Postives = 405/412 (98.30%), Query Frame = 0
BLAST of CmoCh02G004860 vs. NCBI nr
Match: XP_004151852.1 (maltose excess protein 1-like, chloroplastic [Cucumis sativus] >KGN63344.1 hypothetical protein Csa_021984 [Cucumis sativus]) HSP 1 Score: 698.0 bits (1800), Expect = 5.0e-197 Identity = 356/413 (86.20%), Postives = 377/413 (91.28%), Query Frame = 0
BLAST of CmoCh02G004860 vs. TAIR 10
Match: AT5G17520.1 (root cap 1 (RCP1) ) HSP 1 Score: 459.5 bits (1181), Expect = 2.8e-129 Identity = 237/394 (60.15%), Postives = 295/394 (74.87%), Query Frame = 0
BLAST of CmoCh02G004860 vs. TAIR 10
Match: AT5G17523.1 (Similar to Maltose excess protein 1 ) HSP 1 Score: 187.6 bits (475), Expect = 2.0e-47 Identity = 109/201 (54.23%), Postives = 139/201 (69.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|