Homology
BLAST of CmoCh02G004840 vs. ExPASy Swiss-Prot
Match:
Q9LER0 (Pentatricopeptide repeat-containing protein At5g14770, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g14770 PE=3 SV=2)
HSP 1 Score: 670.6 bits (1729), Expect = 2.1e-191
Identity = 330/719 (45.90%), Postives = 494/719 (68.71%), Query Frame = 0
Query: 66 KQFMESVSDEQSI--DVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGLCKH 125
K ++ +S+ I + ++S + +EEA Y +MV SG PDVVT+SSI+ LCK
Sbjct: 218 KALVDEISELNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKG 277
Query: 126 GKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDLIAC 185
GK+ EG LLLREME+M ++PN ++Y+ L+D+LFKA + AL M+VRG DL+
Sbjct: 278 GKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVY 337
Query: 186 TVLIDGFCKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHEMEE 245
TVL+DG K G ++EAE F L + N VPN +TY+ L+DG CK GD++ AE + +M E
Sbjct: 338 TVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLE 397
Query: 246 KDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGWQDI 305
K +PNV+TYSSMINGYVKKGML A ++LRKM +NV+PN FTY ++DG FKAG +++
Sbjct: 398 KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM 457
Query: 306 ALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTNLMD 365
A++L +M+ G+++N ILDA VN+LKR GR++E + L+ M S G+ D +NYT+L+D
Sbjct: 458 AIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 517
Query: 366 GFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGLSPD 425
F K G E +AL A+E+ + + +DVV++NVLI+G+ K GK + YK M + G+ PD
Sbjct: 518 VFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPD 577
Query: 426 SATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAINIVK 485
AT+N M+N K+G+ E ++LW++MKS + PS ++CN+++ LCE G++E AI+I+
Sbjct: 578 IATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILN 637
Query: 486 EMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLCKLG 545
+M++M ++P L TYRI L+ SSK +RAD I + H+ L+ +++++ +YN LI+ LCKLG
Sbjct: 638 QMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLG 697
Query: 546 MTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIETFN 605
MT+KA V+ DME RG + DT+T+N+L+ GY + SH+++A T+S M+ G+SPN+ T+N
Sbjct: 698 MTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYN 757
Query: 606 LLLGGLSKAGLIREADDLLNKIKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEMVIK 665
++ GLS AGLI+E D L+++K RG+ P+ TY L+ G K+GN K ++ YCEM+
Sbjct: 758 TIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIAD 817
Query: 666 GFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKMPEL 725
G +P+ YN LI F+ +GKM QA+EL+KEM ++GVSP +STY +I G CKL P++
Sbjct: 818 GLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDV 877
Query: 726 DRTSKVSYRAEAKRLLNEM-NDRGFVPCESTLFCIGSTFAAPGKKADARMLLKSTFRRR 782
+ K Y AEAK LL EM ++G++PC T++ I + F+ PG K DA LK ++++
Sbjct: 878 EWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFLKECYKKK 933
BLAST of CmoCh02G004840 vs. ExPASy Swiss-Prot
Match:
Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)
HSP 1 Score: 297.7 bits (761), Expect = 3.7e-79
Identity = 170/562 (30.25%), Postives = 297/562 (52.85%), Query Frame = 0
Query: 81 NITSNVRENG-LEEALSLYEEMVGSGIFPDVVTYSSILYGLCKHGKLSEGKLLLREMEKM 140
++ +R+ G +EEAL+L + +V G+ P++ Y++++ LCK K E +LL M K+
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 141 GMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDLIACTVLIDGFCKNGGIKEA 200
G+ PND++YSIL+D + K+ AL LG M+ G + LI+G CK G I A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 201 EYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHEMEEKDCVPNVITYSSMING 260
E + L P +TY+ L+ G C G IN A HEM K P++ T++++++G
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 261 YVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGWQDIALDLYNKMKQRGLKDN 320
+ G++ +A + +M NV PN TY ++++G + G A + +M ++G+ +
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 321 VLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTNLMDGFLKSGKESSALNLAQ 380
++ L +G+ EA+ + + G + + YT L+ GF + GK AL++ Q
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636
Query: 381 ELISKNVMFDVVAFNVLINGLFK-LGKCDTESIYKVMGDLGLSPDSATYNTMINGNFKKG 440
E++ + V D+V + VLI+G K + + K M D GL PD Y +MI+ K G
Sbjct: 637 EMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Query: 441 NWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAINIVKEMVVMGLYPTLITYR 500
+++ A +W+ M + VP+ +T +INGLC+AG + A + +M + P +TY
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 756
Query: 501 ILLNASSKSR-RADTILQVHKLLVDLHLEVNKDIYNILISNLCKLGMTRKATAVLKDMEK 560
L+ +K +++H ++ L N YN+LI C+ G +A+ ++ M
Sbjct: 757 CFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIG 816
Query: 561 RGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIETFNLLLGGLSKAGLIRE 620
G+ D ITY +I C + +K+A +++M +G+ P+ +N L+ G AG + +
Sbjct: 817 DGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGK 876
Query: 621 ADDLLNKIKKRGLVPNACTYET 640
A +L N++ ++GL+PN T T
Sbjct: 877 ATELRNEMLRQGLIPNNKTSRT 897
BLAST of CmoCh02G004840 vs. ExPASy Swiss-Prot
Match:
Q9FIT7 (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61990 PE=2 SV=1)
HSP 1 Score: 290.0 bits (741), Expect = 7.8e-77
Identity = 184/692 (26.59%), Postives = 332/692 (47.98%), Query Frame = 0
Query: 91 LEEALSLYEEMVGSGIFPDVVTYSSILYGLCKHGKLSEGKLLLREMEKMGMHPNDISYSI 150
++ AL L E M+ G+ P TY ++ GLCK +L + K LL EM+ +G+ ++ +YS+
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 151 LLDALFKARKIKEALMTLGCMIVRGNS-----FDLIACTV-------------------- 210
L+D L K R A + M+ G + +D C +
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 211 ----------LIDGFCKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAE 270
LI+G+C+ +++ + + + N+V + TY ++ G C GD++GA
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 271 SSLHEMEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGS 330
+ + EM C PNV+ Y+++I +++ +A VL++M + + P+IF Y L+ G
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL 497
Query: 331 FKAGWQDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDL 390
KA D A +M + GLK N AF++ + A+ + +M G++P+
Sbjct: 498 SKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Query: 391 VNYTNLMDGFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGLFKLGKC-DTESIYKV 450
V T L++ + K GK A + + ++ + ++ D + VL+NGLFK K D E I++
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 451 MGDLGLSPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGR 510
M G++PD +Y +ING K GN + A +++EM L P+ I N+++ G C +G
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 511 IENAINIVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLE---VNKDI 570
IE A ++ EM V GL+P +TY +++ KS + + +L ++ L+ + +
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS---GDLAEAFRLFDEMKLKGLVPDSFV 737
Query: 571 YNILISNLCKLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTML 630
Y L+ C+L +A + K+G + T +NALI + + ++
Sbjct: 738 YTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLM 797
Query: 631 SEGV----SPNIETFNLLLGGLSKAGLIREADDLLNKIKKRGLVPNACTYETLMCGHCKV 690
PN T+N+++ L K G + A +L ++++ L+P TY +L+ G+ K+
Sbjct: 798 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 857
Query: 691 GNTKEALRFYCEMVIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRK-----GVSP 735
G E + E + G P Y+ +I F K G ++A L+ +M K G
Sbjct: 858 GRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKL 917
BLAST of CmoCh02G004840 vs. ExPASy Swiss-Prot
Match:
Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)
HSP 1 Score: 281.2 bits (718), Expect = 3.6e-74
Identity = 168/627 (26.79%), Postives = 301/627 (48.01%), Query Frame = 0
Query: 84 SNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGLCKHGKLSEGKLLLREMEKMGMHP 143
+ + E L++A++L+ EMV S FP ++ +S +L + K K L +M+ +G+
Sbjct: 55 NGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPH 114
Query: 144 NDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDLIACTVLIDGFCKNGGIKEAEYIF 203
N +YSIL++ + ++ AL LG M+ G +++ + L++G+C + I EA +
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 204 NNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHEMEEKDCVPNVITYSSMINGYVKK 263
+ ++ PN++T++ LI G + A + + M K C P+++TY ++NG K+
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 264 GMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGWQDIALDLYNKMKQRGLKDNVLIL 323
G AFN+L KM + P + Y ++DG K D AL+L+ +M+ +G++ NV+
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 324 DAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTNLMDGFLKSGKESSALNLAQELIS 383
+ ++ L GR +A L++ M + PD+ ++ L+D F+K GK A L E++
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 384 KNVMFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGLSPDSATYNTMINGNFKKGNWETA 443
+++ P TY+++ING + A
Sbjct: 355 RSI----------------------------------DPSIVTYSSLINGFCMHDRLDEA 414
Query: 444 VQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAINIVKEMVVMGLYPTLITYRILLNA 503
Q++ M S+ P +T N +I G C+ R+E + + +EM GL +T
Sbjct: 415 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT------- 474
Query: 504 SSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLCKLGMTRKATAVLKDMEKRGILAD 563
YNILI L + G A + K+M G+ +
Sbjct: 475 ----------------------------YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 534
Query: 564 TITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIETFNLLLGGLSKAGLIREADDLLN 623
+TYN L+ G C + L++A + F + + P I T+N+++ G+ KAG + + DL
Sbjct: 535 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 594
Query: 624 KIKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEMVIKGFIPRAGAYNTLIGYFSKMG 683
+ +G+ P+ Y T++ G C+ G+ +EA + EM G +P +G YNTLI + G
Sbjct: 595 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 612
Query: 684 KMSQAKELMKEMQRKGVSPTSSTYDIL 711
+ EL+KEM+ G + +ST ++
Sbjct: 655 DREASAELIKEMRSCGFAGDASTIGLV 612
BLAST of CmoCh02G004840 vs. ExPASy Swiss-Prot
Match:
Q9LN69 (Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis thaliana OX=3702 GN=At1g19290 PE=3 SV=2)
HSP 1 Score: 275.0 bits (702), Expect = 2.6e-72
Identity = 189/702 (26.92%), Postives = 330/702 (47.01%), Query Frame = 0
Query: 113 YSSILYGLCKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMI 172
+ IL + G + + M G P+ +S + LL L + + AL MI
Sbjct: 158 FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMI 217
Query: 173 VRGNSFDLIACTVLIDGFCKNGGIKEA-EYIFNNLYQLNLVPNSITYSVLIDGRCKLGDI 232
S D+ C+++++ +C++G + +A + L L N +TY+ LI+G +GD+
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDV 277
Query: 233 NGAESSLHEMEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAIL 292
G L M E+ NV+TY+S+I GY KKG++ A +V + K ++ + Y +L
Sbjct: 278 EGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVL 337
Query: 293 LDGSFKAGWQDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGL 352
+DG + G A+ +++ M + G++ N I ++ +N +SG++ EAE + ++M L
Sbjct: 338 MDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSL 397
Query: 353 IPDLVNYTNLMDGFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGLFKLGKC-DTES 412
PD Y L+DG+ ++G AL L ++ K V+ V+ +N+L+ G ++G D S
Sbjct: 398 KPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLS 457
Query: 413 IYKVMGDLGLSPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLC 472
++K+M G++ D + +T++ FK G++ A++LW + +R L+ IT N+MI+GLC
Sbjct: 458 LWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLC 517
Query: 473 EAGRIENAINIVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKD 532
+ ++ A I+ + + P + TY+ L + K V + + + +
Sbjct: 518 KMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIE 577
Query: 533 IYNILISNLCKLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTM 592
+YN LIS K K ++ ++ RG+ TY ALI G+C + +A+ T M
Sbjct: 578 MYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM 637
Query: 593 LSEGVSPNIETFNLLLGGLSKAGLIREADDLLNKI------------------------- 652
+ +G++ N+ + + L + I EA LL KI
Sbjct: 638 IEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCL 697
Query: 653 -------------KKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEMVIKG-FIPRAGA 712
K+ LVPN Y + G CK G ++A + + +++ FIP
Sbjct: 698 KTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYT 757
Query: 713 YNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKMPELDRTSKVSY 772
Y LI + G +++A L EM KG+ P TY+ LI G CKL +DR
Sbjct: 758 YTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLG---NVDR------ 817
Query: 773 RAEAKRLLNEMNDRGFVPCESTLFCIGSTFAAPGKKADARML 774
A+RLL+++ +G P T + G A+A L
Sbjct: 818 ---AQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRL 847
BLAST of CmoCh02G004840 vs. ExPASy TrEMBL
Match:
A0A6J1G7D9 (pentatricopeptide repeat-containing protein At5g14770, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111451425 PE=4 SV=1)
HSP 1 Score: 1552.7 bits (4019), Expect = 0.0e+00
Identity = 783/783 (100.00%), Postives = 783/783 (100.00%), Query Frame = 0
Query: 1 MARRSVAFPFSRLLLSHVFKNPMDAIFHGFPPSSRNPNLSLLGALFCSTSSSRDVRNLLA 60
MARRSVAFPFSRLLLSHVFKNPMDAIFHGFPPSSRNPNLSLLGALFCSTSSSRDVRNLLA
Sbjct: 1 MARRSVAFPFSRLLLSHVFKNPMDAIFHGFPPSSRNPNLSLLGALFCSTSSSRDVRNLLA 60
Query: 61 ELKIEKQFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL 120
ELKIEKQFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL
Sbjct: 61 ELKIEKQFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL 120
Query: 121 CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDL 180
CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDL
Sbjct: 121 CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDL 180
Query: 181 IACTVLIDGFCKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE 240
IACTVLIDGFCKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE
Sbjct: 181 IACTVLIDGFCKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE 240
Query: 241 MEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW 300
MEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW
Sbjct: 241 MEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW 300
Query: 301 QDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN 360
QDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN
Sbjct: 301 QDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN 360
Query: 361 LMDGFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL 420
LMDGFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL
Sbjct: 361 LMDGFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL 420
Query: 421 SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN 480
SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN
Sbjct: 421 SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN 480
Query: 481 IVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLC 540
IVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLC
Sbjct: 481 IVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLC 540
Query: 541 KLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIE 600
KLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIE
Sbjct: 541 KLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIE 600
Query: 601 TFNLLLGGLSKAGLIREADDLLNKIKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEM 660
TFNLLLGGLSKAGLIREADDLLNKIKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEM
Sbjct: 601 TFNLLLGGLSKAGLIREADDLLNKIKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEM 660
Query: 661 VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKM 720
VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKM
Sbjct: 661 VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKM 720
Query: 721 PELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGSTFAAPGKKADARMLLKSTFRR 780
PELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGSTFAAPGKKADARMLLKSTFRR
Sbjct: 721 PELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGSTFAAPGKKADARMLLKSTFRR 780
Query: 781 RRE 784
RRE
Sbjct: 781 RRE 783
BLAST of CmoCh02G004840 vs. ExPASy TrEMBL
Match:
A0A6J1L1T8 (pentatricopeptide repeat-containing protein At5g14770, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499638 PE=4 SV=1)
HSP 1 Score: 1510.7 bits (3910), Expect = 0.0e+00
Identity = 764/783 (97.57%), Postives = 772/783 (98.60%), Query Frame = 0
Query: 1 MARRSVAFPFSRLLLSHVFKNPMDAIFHGFPPSSRNPNLSLLGALFCSTSSSRDVRNLLA 60
MA+RSVA P SRLLLSHVFKNPMDAIFHGFP SSRNPNLSLLGALFCSTSSSRDVRNLLA
Sbjct: 1 MAKRSVALPLSRLLLSHVFKNPMDAIFHGFPHSSRNPNLSLLGALFCSTSSSRDVRNLLA 60
Query: 61 ELKIEKQFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL 120
ELKIEKQFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL
Sbjct: 61 ELKIEKQFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL 120
Query: 121 CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDL 180
CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLG MIVRGNSFDL
Sbjct: 121 CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGRMIVRGNSFDL 180
Query: 181 IACTVLIDGFCKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE 240
IACTVLIDGF KNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE
Sbjct: 181 IACTVLIDGFFKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE 240
Query: 241 MEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW 300
MEEK CVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW
Sbjct: 241 MEEKHCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW 300
Query: 301 QDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN 360
QDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN
Sbjct: 301 QDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN 360
Query: 361 LMDGFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL 420
LMDGFLKSGKESSALNLAQELISKNV+FDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL
Sbjct: 361 LMDGFLKSGKESSALNLAQELISKNVVFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL 420
Query: 421 SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN 480
SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN
Sbjct: 421 SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN 480
Query: 481 IVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLC 540
IVKEMV MGLYPTLITYRILLNASSKSRRADTILQ+HKLLVDLHLEVNKDIYNILISNLC
Sbjct: 481 IVKEMVTMGLYPTLITYRILLNASSKSRRADTILQIHKLLVDLHLEVNKDIYNILISNLC 540
Query: 541 KLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIE 600
KLGMTRKATAVL DMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGV PNI
Sbjct: 541 KLGMTRKATAVLNDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVPPNIV 600
Query: 601 TFNLLLGGLSKAGLIREADDLLNKIKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEM 660
T+NLLLGGLSKAGLIREADDLL++IKKRGLVPNACTYET+MCGHCKVGNTKEALRFYCEM
Sbjct: 601 TYNLLLGGLSKAGLIREADDLLSEIKKRGLVPNACTYETVMCGHCKVGNTKEALRFYCEM 660
Query: 661 VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKM 720
VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILI GWCKLSKM
Sbjct: 661 VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILIFGWCKLSKM 720
Query: 721 PELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGSTFAAPGKKADARMLLKSTFRR 780
PELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGSTFAAPGKKADARMLLKSTFRR
Sbjct: 721 PELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGSTFAAPGKKADARMLLKSTFRR 780
Query: 781 RRE 784
+RE
Sbjct: 781 KRE 783
BLAST of CmoCh02G004840 vs. ExPASy TrEMBL
Match:
A0A6J1KZE2 (pentatricopeptide repeat-containing protein At5g14770, mitochondrial isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499638 PE=4 SV=1)
HSP 1 Score: 1329.7 bits (3440), Expect = 0.0e+00
Identity = 668/683 (97.80%), Postives = 675/683 (98.83%), Query Frame = 0
Query: 101 MVGSGIFPDVVTYSSILYGLCKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARK 160
MVGSGIFPDVVTYSSILYGLCKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARK
Sbjct: 1 MVGSGIFPDVVTYSSILYGLCKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARK 60
Query: 161 IKEALMTLGCMIVRGNSFDLIACTVLIDGFCKNGGIKEAEYIFNNLYQLNLVPNSITYSV 220
IKEALMTLG MIVRGNSFDLIACTVLIDGF KNGGIKEAEYIFNNLYQLNLVPNSITYSV
Sbjct: 61 IKEALMTLGRMIVRGNSFDLIACTVLIDGFFKNGGIKEAEYIFNNLYQLNLVPNSITYSV 120
Query: 221 LIDGRCKLGDINGAESSLHEMEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKN 280
LIDGRCKLGDINGAESSLHEMEEK CVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKN
Sbjct: 121 LIDGRCKLGDINGAESSLHEMEEKHCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKN 180
Query: 281 VMPNIFTYAILLDGSFKAGWQDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAE 340
VMPNIFTYAILLDGSFKAGWQDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAE
Sbjct: 181 VMPNIFTYAILLDGSFKAGWQDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAE 240
Query: 341 DLIAKMESGGLIPDLVNYTNLMDGFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGL 400
DLIAKMESGGLIPDLVNYTNLMDGFLKSGKESSALNLAQELISKNV+FDVVAFNVLINGL
Sbjct: 241 DLIAKMESGGLIPDLVNYTNLMDGFLKSGKESSALNLAQELISKNVVFDVVAFNVLINGL 300
Query: 401 FKLGKCDTESIYKVMGDLGLSPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAI 460
FKLGKCDTESIYKVMGDLGLSPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAI
Sbjct: 301 FKLGKCDTESIYKVMGDLGLSPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAI 360
Query: 461 TCNLMINGLCEAGRIENAINIVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLL 520
TCNLMINGLCEAGRIENAINIVKEMV MGLYPTLITYRILLNASSKSRRADTILQ+HKLL
Sbjct: 361 TCNLMINGLCEAGRIENAINIVKEMVTMGLYPTLITYRILLNASSKSRRADTILQIHKLL 420
Query: 521 VDLHLEVNKDIYNILISNLCKLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHL 580
VDLHLEVNKDIYNILISNLCKLGMTRKATAVL DMEKRGILADTITYNALIQGYCISSHL
Sbjct: 421 VDLHLEVNKDIYNILISNLCKLGMTRKATAVLNDMEKRGILADTITYNALIQGYCISSHL 480
Query: 581 KRAFITFSTMLSEGVSPNIETFNLLLGGLSKAGLIREADDLLNKIKKRGLVPNACTYETL 640
KRAFITFSTMLSEGV PNI T+NLLLGGLSKAGLIREADDLL++IKKRGLVPNACTYET+
Sbjct: 481 KRAFITFSTMLSEGVPPNIVTYNLLLGGLSKAGLIREADDLLSEIKKRGLVPNACTYETV 540
Query: 641 MCGHCKVGNTKEALRFYCEMVIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGV 700
MCGHCKVGNTKEALRFYCEMVIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGV
Sbjct: 541 MCGHCKVGNTKEALRFYCEMVIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGV 600
Query: 701 SPTSSTYDILICGWCKLSKMPELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGST 760
SPTSSTYDILI GWCKLSKMPELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGST
Sbjct: 601 SPTSSTYDILIFGWCKLSKMPELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGST 660
Query: 761 FAAPGKKADARMLLKSTFRRRRE 784
FAAPGKKADARMLLKSTFRR+RE
Sbjct: 661 FAAPGKKADARMLLKSTFRRKRE 683
BLAST of CmoCh02G004840 vs. ExPASy TrEMBL
Match:
A0A1S3CI98 (pentatricopeptide repeat-containing protein At5g14770, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103501086 PE=4 SV=1)
HSP 1 Score: 1282.3 bits (3317), Expect = 0.0e+00
Identity = 642/785 (81.78%), Postives = 707/785 (90.06%), Query Frame = 0
Query: 1 MARRSVAFPFSRLLLSHVFKNPMDAIFHGFPPSSRNPNLSLLGALFCSTSSSRDVRNLLA 60
MA+RSV PFSRLLL+ KNPM A +HGF PS+R PN SLLG FCSTS+ VR+LLA
Sbjct: 1 MAKRSVGLPFSRLLLNRALKNPMGAAYHGFYPSARTPNPSLLGRPFCSTSTPTAVRHLLA 60
Query: 61 ELKIEK--QFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILY 120
+L++EK + MES SDE+ IDVN T N R+NGLEEAL+LYEEMVGSGIFPDVVTY SILY
Sbjct: 61 KLEMEKHLKLMESDSDEKLIDVNRTRNARQNGLEEALTLYEEMVGSGIFPDVVTYGSILY 120
Query: 121 GLCKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSF 180
GLCKHGKLSEGKLLLREM KMGM+ N++SY+ILLDALFKA K+ EALMTLGCMIVRGN+F
Sbjct: 121 GLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTLGCMIVRGNNF 180
Query: 181 DLIACTVLIDGFCKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSL 240
D+IACTVLIDGF KNG IKEAEY+F NLYQLNLVPN ITYS LIDGRCKL DINGAES+L
Sbjct: 181 DVIACTVLIDGFFKNGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKLEDINGAESAL 240
Query: 241 HEMEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKA 300
HEMEEKDCVPNVITYSSMINGYVKKG+L +AF VLRKMV+KN MPNI+TYAILLDGSFKA
Sbjct: 241 HEMEEKDCVPNVITYSSMINGYVKKGLLHDAFKVLRKMVNKNAMPNIYTYAILLDGSFKA 300
Query: 301 GWQDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNY 360
GWQDIALDLY+KMKQ GLKDNV ILDAFVNN+KRSGRMEEAE+L+AKM SGGL PDLVNY
Sbjct: 301 GWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNY 360
Query: 361 TNLMDGFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGLFKLGKCDTESIYKVMGDL 420
TNLMDGFLKSGK SSALNLAQE+ SKNV+FD+V FNVLINGLFKLGKCDT SIY M ++
Sbjct: 361 TNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINGLFKLGKCDTGSIYSAMREM 420
Query: 421 GLSPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENA 480
GLSPD ATYNTMING FKKGNW++A++LWNEMKSRKLVPSAITCN+MINGLCEAGR+ENA
Sbjct: 421 GLSPDLATYNTMINGYFKKGNWKSALELWNEMKSRKLVPSAITCNIMINGLCEAGRMENA 480
Query: 481 INIVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISN 540
I+I+KEM +MGLYPT TYRILLN SSKSRRADTILQ H+LLV++HL+V+KD+YNILIS+
Sbjct: 481 IDILKEMGLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMHLKVDKDVYNILISH 540
Query: 541 LCKLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPN 600
LCKLGMTRKATAVLKDME+RG +ADT TYNALI GYCISSHLKRAF+T+STMLSE VSPN
Sbjct: 541 LCKLGMTRKATAVLKDMEERGFIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPN 600
Query: 601 IETFNLLLGGLSKAGLIREADDLLNKIKKRGLVPNACTYETLMCGHCKVGNTKEALRFYC 660
IET+NLLLGGLSKAGLI EADDLL++IKKRGLVPNACTYETLMCGHCKVGNTKE LR YC
Sbjct: 601 IETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVGNTKECLRIYC 660
Query: 661 EMVIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLS 720
EMVIKGFIP+ AYN LIGYFSKMGKM QA ELM EMQ KGVSPTS+TYDILICGWC L
Sbjct: 661 EMVIKGFIPKPRAYNMLIGYFSKMGKMKQANELMNEMQTKGVSPTSTTYDILICGWCNLL 720
Query: 721 KMPELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGSTFAAPGKKADARMLLKSTF 780
KMP+L RT K+SYRAEAKRL EMNDRGFVP ESTL CI STFAAPGKKADARMLLKST+
Sbjct: 721 KMPDLGRTLKISYRAEAKRLFIEMNDRGFVPSESTLACISSTFAAPGKKADARMLLKSTY 780
Query: 781 RRRRE 784
+R+RE
Sbjct: 781 KRKRE 785
BLAST of CmoCh02G004840 vs. ExPASy TrEMBL
Match:
A0A5A7VGU7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001400 PE=4 SV=1)
HSP 1 Score: 1275.4 bits (3299), Expect = 0.0e+00
Identity = 643/799 (80.48%), Postives = 708/799 (88.61%), Query Frame = 0
Query: 1 MARRSVAFPFSRLLLSHVFKNPMDAIFHGFPPSSRNPNLSLLGALFCSTSSSRDVRNLLA 60
MA+RSV PFSRLLL+ KNPM A +HGF PS+R PN SLLG FCSTS+ VR+LLA
Sbjct: 1 MAKRSVGLPFSRLLLNRALKNPMGAAYHGFYPSARTPNPSLLGRPFCSTSTPTAVRHLLA 60
Query: 61 ELKIEK--QFMESV--------------SDEQSIDVNITSNVRENGLEEALSLYEEMVGS 120
+L++EK + MESV SDE+ IDVN T N R+NGLEEAL+LYEEMVGS
Sbjct: 61 KLEMEKHLKLMESVANFLPKYFCFILTDSDEKLIDVNRTRNARQNGLEEALTLYEEMVGS 120
Query: 121 GIFPDVVTYSSILYGLCKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEA 180
GIFPDVVTY SILYGLCKHGKLSEGKLLLREM KMGM+ N++SY+ILLDALFKA K+ EA
Sbjct: 121 GIFPDVVTYGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEA 180
Query: 181 LMTLGCMIVRGNSFDLIACTVLIDGFCKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDG 240
LMTLGCMIVRGN+FD+IACTVLIDGF KNG IKEAEY+F NLYQLNLVPN ITYS LIDG
Sbjct: 181 LMTLGCMIVRGNNFDVIACTVLIDGFFKNGQIKEAEYLFCNLYQLNLVPNYITYSALIDG 240
Query: 241 RCKLGDINGAESSLHEMEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPN 300
RCKL DINGAES+LHEMEEKDCVPNVITYSSMINGYVKKG+L +AF VLRKMV+KN MPN
Sbjct: 241 RCKLEDINGAESALHEMEEKDCVPNVITYSSMINGYVKKGLLHDAFKVLRKMVNKNAMPN 300
Query: 301 IFTYAILLDGSFKAGWQDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIA 360
I+TYAILLDGSFKAGWQDIALDLY+KMKQ GLKDNV ILDAFVNN+KRSGRMEEAE+L+A
Sbjct: 301 IYTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVA 360
Query: 361 KMESGGLIPDLVNYTNLMDGFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGLFKLG 420
KM SGGL PDLVNYTNLMDGFLKSGK SSALNLAQE+ SKNV+FD+V FNVLINGLFKLG
Sbjct: 361 KMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINGLFKLG 420
Query: 421 KCDTESIYKVMGDLGLSPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNL 480
KCDT SIY M ++GLSPD ATYNTMING FKKGNW++A++LWNEMKSRKLVPSAITCN+
Sbjct: 421 KCDTGSIYSAMREMGLSPDLATYNTMINGYFKKGNWKSALELWNEMKSRKLVPSAITCNI 480
Query: 481 MINGLCEAGRIENAINIVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLH 540
MINGLCEAGR+ENAI+I+KEM +MGLYPT TYRILLN SSKSRRADTILQ H+LLV++H
Sbjct: 481 MINGLCEAGRMENAIDILKEMGLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMH 540
Query: 541 LEVNKDIYNILISNLCKLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAF 600
L+V+KD+YNILIS+LCKLGMTRKATAVLKDME+RG +ADT TYNALI GYCISSHLKRAF
Sbjct: 541 LKVDKDVYNILISHLCKLGMTRKATAVLKDMEERGFIADTTTYNALIHGYCISSHLKRAF 600
Query: 601 ITFSTMLSEGVSPNIETFNLLLGGLSKAGLIREADDLLNKIKKRGLVPNACTYETLMCGH 660
+T+STMLSE VSPNIET+NLLLGGLSKAGLI EADDLL++IKKRGLVPNACTYETLMCGH
Sbjct: 601 MTYSTMLSERVSPNIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGH 660
Query: 661 CKVGNTKEALRFYCEMVIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTS 720
CKVGNTKE LR YCEMVIKGFIP+ AYN LIGYFSKMGKM QA ELM EMQ KGVSPTS
Sbjct: 661 CKVGNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQANELMNEMQTKGVSPTS 720
Query: 721 STYDILICGWCKLSKMPELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGSTFAAP 780
+TYDILICGWC L KMP+L RT K+SYRAEAKRL EMNDRGFVP ESTL CI STFAAP
Sbjct: 721 TTYDILICGWCNLLKMPDLGRTLKISYRAEAKRLFIEMNDRGFVPSESTLACISSTFAAP 780
Query: 781 GKKADARMLLKSTFRRRRE 784
GKKADARMLLKST++R+RE
Sbjct: 781 GKKADARMLLKSTYKRKRE 799
BLAST of CmoCh02G004840 vs. NCBI nr
Match:
XP_022947610.1 (pentatricopeptide repeat-containing protein At5g14770, mitochondrial [Cucurbita moschata] >XP_022947611.1 pentatricopeptide repeat-containing protein At5g14770, mitochondrial [Cucurbita moschata])
HSP 1 Score: 1552.7 bits (4019), Expect = 0.0e+00
Identity = 783/783 (100.00%), Postives = 783/783 (100.00%), Query Frame = 0
Query: 1 MARRSVAFPFSRLLLSHVFKNPMDAIFHGFPPSSRNPNLSLLGALFCSTSSSRDVRNLLA 60
MARRSVAFPFSRLLLSHVFKNPMDAIFHGFPPSSRNPNLSLLGALFCSTSSSRDVRNLLA
Sbjct: 1 MARRSVAFPFSRLLLSHVFKNPMDAIFHGFPPSSRNPNLSLLGALFCSTSSSRDVRNLLA 60
Query: 61 ELKIEKQFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL 120
ELKIEKQFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL
Sbjct: 61 ELKIEKQFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL 120
Query: 121 CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDL 180
CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDL
Sbjct: 121 CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDL 180
Query: 181 IACTVLIDGFCKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE 240
IACTVLIDGFCKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE
Sbjct: 181 IACTVLIDGFCKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE 240
Query: 241 MEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW 300
MEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW
Sbjct: 241 MEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW 300
Query: 301 QDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN 360
QDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN
Sbjct: 301 QDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN 360
Query: 361 LMDGFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL 420
LMDGFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL
Sbjct: 361 LMDGFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL 420
Query: 421 SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN 480
SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN
Sbjct: 421 SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN 480
Query: 481 IVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLC 540
IVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLC
Sbjct: 481 IVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLC 540
Query: 541 KLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIE 600
KLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIE
Sbjct: 541 KLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIE 600
Query: 601 TFNLLLGGLSKAGLIREADDLLNKIKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEM 660
TFNLLLGGLSKAGLIREADDLLNKIKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEM
Sbjct: 601 TFNLLLGGLSKAGLIREADDLLNKIKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEM 660
Query: 661 VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKM 720
VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKM
Sbjct: 661 VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKM 720
Query: 721 PELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGSTFAAPGKKADARMLLKSTFRR 780
PELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGSTFAAPGKKADARMLLKSTFRR
Sbjct: 721 PELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGSTFAAPGKKADARMLLKSTFRR 780
Query: 781 RRE 784
RRE
Sbjct: 781 RRE 783
BLAST of CmoCh02G004840 vs. NCBI nr
Match:
XP_023534270.1 (pentatricopeptide repeat-containing protein At5g14770, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023534271.1 pentatricopeptide repeat-containing protein At5g14770, mitochondrial-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1523.1 bits (3942), Expect = 0.0e+00
Identity = 767/783 (97.96%), Postives = 777/783 (99.23%), Query Frame = 0
Query: 1 MARRSVAFPFSRLLLSHVFKNPMDAIFHGFPPSSRNPNLSLLGALFCSTSSSRDVRNLLA 60
MA+RSVAFPFSRLLLSHVFKNPMDAIFHGFPPSSRNPNLSLLGALFCSTSSSRDVRNLLA
Sbjct: 1 MAKRSVAFPFSRLLLSHVFKNPMDAIFHGFPPSSRNPNLSLLGALFCSTSSSRDVRNLLA 60
Query: 61 ELKIEKQFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL 120
ELKIEKQFMESVSDEQSID++ITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL
Sbjct: 61 ELKIEKQFMESVSDEQSIDLSITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL 120
Query: 121 CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDL 180
CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDL
Sbjct: 121 CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDL 180
Query: 181 IACTVLIDGFCKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE 240
IACTVLIDGF KNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE
Sbjct: 181 IACTVLIDGFFKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE 240
Query: 241 MEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW 300
MEEK CVPNVITYSSMINGYVK GMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW
Sbjct: 241 MEEKHCVPNVITYSSMINGYVKNGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW 300
Query: 301 QDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN 360
QDIALDLYNKMKQ+GLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN
Sbjct: 301 QDIALDLYNKMKQKGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN 360
Query: 361 LMDGFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL 420
LMDGFLKSGKESSALNLAQELISKNV+FDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL
Sbjct: 361 LMDGFLKSGKESSALNLAQELISKNVVFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL 420
Query: 421 SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN 480
SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN
Sbjct: 421 SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN 480
Query: 481 IVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLC 540
IVKEMVVMGLYPT ITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLC
Sbjct: 481 IVKEMVVMGLYPTSITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLC 540
Query: 541 KLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIE 600
KLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAF TFSTMLSEGVSPNI
Sbjct: 541 KLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFTTFSTMLSEGVSPNIV 600
Query: 601 TFNLLLGGLSKAGLIREADDLLNKIKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEM 660
T+NLLLGGLSKAGLIREADDLL++IKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEM
Sbjct: 601 TYNLLLGGLSKAGLIREADDLLSEIKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEM 660
Query: 661 VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKM 720
VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKM
Sbjct: 661 VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKM 720
Query: 721 PELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGSTFAAPGKKADARMLLKSTFRR 780
PELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGSTFAAPGKKADARMLLKSTFR+
Sbjct: 721 PELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGSTFAAPGKKADARMLLKSTFRK 780
Query: 781 RRE 784
+RE
Sbjct: 781 KRE 783
BLAST of CmoCh02G004840 vs. NCBI nr
Match:
XP_023007018.1 (pentatricopeptide repeat-containing protein At5g14770, mitochondrial isoform X1 [Cucurbita maxima] >XP_023007019.1 pentatricopeptide repeat-containing protein At5g14770, mitochondrial isoform X1 [Cucurbita maxima] >XP_023007020.1 pentatricopeptide repeat-containing protein At5g14770, mitochondrial isoform X1 [Cucurbita maxima])
HSP 1 Score: 1510.7 bits (3910), Expect = 0.0e+00
Identity = 764/783 (97.57%), Postives = 772/783 (98.60%), Query Frame = 0
Query: 1 MARRSVAFPFSRLLLSHVFKNPMDAIFHGFPPSSRNPNLSLLGALFCSTSSSRDVRNLLA 60
MA+RSVA P SRLLLSHVFKNPMDAIFHGFP SSRNPNLSLLGALFCSTSSSRDVRNLLA
Sbjct: 1 MAKRSVALPLSRLLLSHVFKNPMDAIFHGFPHSSRNPNLSLLGALFCSTSSSRDVRNLLA 60
Query: 61 ELKIEKQFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL 120
ELKIEKQFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL
Sbjct: 61 ELKIEKQFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL 120
Query: 121 CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDL 180
CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLG MIVRGNSFDL
Sbjct: 121 CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGRMIVRGNSFDL 180
Query: 181 IACTVLIDGFCKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE 240
IACTVLIDGF KNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE
Sbjct: 181 IACTVLIDGFFKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE 240
Query: 241 MEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW 300
MEEK CVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW
Sbjct: 241 MEEKHCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW 300
Query: 301 QDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN 360
QDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN
Sbjct: 301 QDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN 360
Query: 361 LMDGFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL 420
LMDGFLKSGKESSALNLAQELISKNV+FDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL
Sbjct: 361 LMDGFLKSGKESSALNLAQELISKNVVFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL 420
Query: 421 SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN 480
SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN
Sbjct: 421 SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN 480
Query: 481 IVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLC 540
IVKEMV MGLYPTLITYRILLNASSKSRRADTILQ+HKLLVDLHLEVNKDIYNILISNLC
Sbjct: 481 IVKEMVTMGLYPTLITYRILLNASSKSRRADTILQIHKLLVDLHLEVNKDIYNILISNLC 540
Query: 541 KLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIE 600
KLGMTRKATAVL DMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGV PNI
Sbjct: 541 KLGMTRKATAVLNDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVPPNIV 600
Query: 601 TFNLLLGGLSKAGLIREADDLLNKIKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEM 660
T+NLLLGGLSKAGLIREADDLL++IKKRGLVPNACTYET+MCGHCKVGNTKEALRFYCEM
Sbjct: 601 TYNLLLGGLSKAGLIREADDLLSEIKKRGLVPNACTYETVMCGHCKVGNTKEALRFYCEM 660
Query: 661 VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKM 720
VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILI GWCKLSKM
Sbjct: 661 VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILIFGWCKLSKM 720
Query: 721 PELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGSTFAAPGKKADARMLLKSTFRR 780
PELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGSTFAAPGKKADARMLLKSTFRR
Sbjct: 721 PELDRTSKVSYRAEAKRLLNEMNDRGFVPCESTLFCIGSTFAAPGKKADARMLLKSTFRR 780
Query: 781 RRE 784
+RE
Sbjct: 781 KRE 783
BLAST of CmoCh02G004840 vs. NCBI nr
Match:
KAG6605167.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1481.8 bits (3835), Expect = 0.0e+00
Identity = 746/751 (99.33%), Postives = 750/751 (99.87%), Query Frame = 0
Query: 1 MARRSVAFPFSRLLLSHVFKNPMDAIFHGFPPSSRNPNLSLLGALFCSTSSSRDVRNLLA 60
MA+RSVAFPFSRLLLSHVFKNPMDAIFHGFPPSSRNPNLSLLGALFCSTSSSRDVRNLLA
Sbjct: 1 MAKRSVAFPFSRLLLSHVFKNPMDAIFHGFPPSSRNPNLSLLGALFCSTSSSRDVRNLLA 60
Query: 61 ELKIEKQFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL 120
ELKIEKQFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL
Sbjct: 61 ELKIEKQFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL 120
Query: 121 CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDL 180
CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDL
Sbjct: 121 CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDL 180
Query: 181 IACTVLIDGFCKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE 240
IACTVLIDGF KNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE
Sbjct: 181 IACTVLIDGFFKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE 240
Query: 241 MEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW 300
MEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW
Sbjct: 241 MEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW 300
Query: 301 QDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN 360
QDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN
Sbjct: 301 QDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN 360
Query: 361 LMDGFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL 420
LMDGFLKSGKESSALNLAQELISKNV+FDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL
Sbjct: 361 LMDGFLKSGKESSALNLAQELISKNVVFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL 420
Query: 421 SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN 480
SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN
Sbjct: 421 SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN 480
Query: 481 IVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLC 540
IVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLC
Sbjct: 481 IVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLC 540
Query: 541 KLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIE 600
KLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIE
Sbjct: 541 KLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIE 600
Query: 601 TFNLLLGGLSKAGLIREADDLLNKIKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEM 660
T+NLLLGGLSKAGLIREADDLLN+IKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEM
Sbjct: 601 TYNLLLGGLSKAGLIREADDLLNEIKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEM 660
Query: 661 VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKM 720
VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKM
Sbjct: 661 VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKM 720
Query: 721 PELDRTSKVSYRAEAKRLLNEMNDRGFVPCE 752
PELDRTSKVSYRAEAKRLLNEMNDRGFVPCE
Sbjct: 721 PELDRTSKVSYRAEAKRLLNEMNDRGFVPCE 751
BLAST of CmoCh02G004840 vs. NCBI nr
Match:
KAG7035158.1 (Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1481.8 bits (3835), Expect = 0.0e+00
Identity = 746/751 (99.33%), Postives = 750/751 (99.87%), Query Frame = 0
Query: 1 MARRSVAFPFSRLLLSHVFKNPMDAIFHGFPPSSRNPNLSLLGALFCSTSSSRDVRNLLA 60
MA+RSVAFPFSRLLLSHVFKNPMDAIFHGFPPSSRNPNLSLLGALFCSTSSSRDVRNLLA
Sbjct: 1 MAKRSVAFPFSRLLLSHVFKNPMDAIFHGFPPSSRNPNLSLLGALFCSTSSSRDVRNLLA 60
Query: 61 ELKIEKQFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL 120
ELKIEKQFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL
Sbjct: 61 ELKIEKQFMESVSDEQSIDVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGL 120
Query: 121 CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDL 180
CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDL
Sbjct: 121 CKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDL 180
Query: 181 IACTVLIDGFCKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE 240
IACTVLIDGF KNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE
Sbjct: 181 IACTVLIDGFFKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHE 240
Query: 241 MEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW 300
MEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW
Sbjct: 241 MEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGW 300
Query: 301 QDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN 360
QDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN
Sbjct: 301 QDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTN 360
Query: 361 LMDGFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL 420
LMDGFLKSGKESSALNLAQELISKNV+FDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL
Sbjct: 361 LMDGFLKSGKESSALNLAQELISKNVVFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGL 420
Query: 421 SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN 480
SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN
Sbjct: 421 SPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAIN 480
Query: 481 IVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLC 540
IVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLC
Sbjct: 481 IVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLC 540
Query: 541 KLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIE 600
KLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIE
Sbjct: 541 KLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIE 600
Query: 601 TFNLLLGGLSKAGLIREADDLLNKIKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEM 660
T+NLLLGGLSKAGLIREADDLLN+IKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEM
Sbjct: 601 TYNLLLGGLSKAGLIREADDLLNEIKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEM 660
Query: 661 VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKM 720
VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKM
Sbjct: 661 VIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKM 720
Query: 721 PELDRTSKVSYRAEAKRLLNEMNDRGFVPCE 752
PELDRTSKVSYRAEAKRLLNEMNDRGFVPCE
Sbjct: 721 PELDRTSKVSYRAEAKRLLNEMNDRGFVPCE 751
BLAST of CmoCh02G004840 vs. TAIR 10
Match:
AT5G14770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 670.6 bits (1729), Expect = 1.5e-192
Identity = 330/719 (45.90%), Postives = 494/719 (68.71%), Query Frame = 0
Query: 66 KQFMESVSDEQSI--DVNITSNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGLCKH 125
K ++ +S+ I + ++S + +EEA Y +MV SG PDVVT+SSI+ LCK
Sbjct: 216 KALVDEISELNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKG 275
Query: 126 GKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDLIAC 185
GK+ EG LLLREME+M ++PN ++Y+ L+D+LFKA + AL M+VRG DL+
Sbjct: 276 GKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVY 335
Query: 186 TVLIDGFCKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHEMEE 245
TVL+DG K G ++EAE F L + N VPN +TY+ L+DG CK GD++ AE + +M E
Sbjct: 336 TVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLE 395
Query: 246 KDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGWQDI 305
K +PNV+TYSSMINGYVKKGML A ++LRKM +NV+PN FTY ++DG FKAG +++
Sbjct: 396 KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM 455
Query: 306 ALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTNLMD 365
A++L +M+ G+++N ILDA VN+LKR GR++E + L+ M S G+ D +NYT+L+D
Sbjct: 456 AIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 515
Query: 366 GFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGLSPD 425
F K G E +AL A+E+ + + +DVV++NVLI+G+ K GK + YK M + G+ PD
Sbjct: 516 VFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPD 575
Query: 426 SATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAINIVK 485
AT+N M+N K+G+ E ++LW++MKS + PS ++CN+++ LCE G++E AI+I+
Sbjct: 576 IATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILN 635
Query: 486 EMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLCKLG 545
+M++M ++P L TYRI L+ SSK +RAD I + H+ L+ +++++ +YN LI+ LCKLG
Sbjct: 636 QMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLG 695
Query: 546 MTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIETFN 605
MT+KA V+ DME RG + DT+T+N+L+ GY + SH+++A T+S M+ G+SPN+ T+N
Sbjct: 696 MTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYN 755
Query: 606 LLLGGLSKAGLIREADDLLNKIKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEMVIK 665
++ GLS AGLI+E D L+++K RG+ P+ TY L+ G K+GN K ++ YCEM+
Sbjct: 756 TIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIAD 815
Query: 666 GFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKMPEL 725
G +P+ YN LI F+ +GKM QA+EL+KEM ++GVSP +STY +I G CKL P++
Sbjct: 816 GLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDV 875
Query: 726 DRTSKVSYRAEAKRLLNEM-NDRGFVPCESTLFCIGSTFAAPGKKADARMLLKSTFRRR 782
+ K Y AEAK LL EM ++G++PC T++ I + F+ PG K DA LK ++++
Sbjct: 876 EWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFLKECYKKK 931
BLAST of CmoCh02G004840 vs. TAIR 10
Match:
AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 297.7 bits (761), Expect = 2.7e-80
Identity = 170/562 (30.25%), Postives = 297/562 (52.85%), Query Frame = 0
Query: 81 NITSNVRENG-LEEALSLYEEMVGSGIFPDVVTYSSILYGLCKHGKLSEGKLLLREMEKM 140
++ +R+ G +EEAL+L + +V G+ P++ Y++++ LCK K E +LL M K+
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 141 GMHPNDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDLIACTVLIDGFCKNGGIKEA 200
G+ PND++YSIL+D + K+ AL LG M+ G + LI+G CK G I A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 201 EYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHEMEEKDCVPNVITYSSMING 260
E + L P +TY+ L+ G C G IN A HEM K P++ T++++++G
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 261 YVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGWQDIALDLYNKMKQRGLKDN 320
+ G++ +A + +M NV PN TY ++++G + G A + +M ++G+ +
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 321 VLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTNLMDGFLKSGKESSALNLAQ 380
++ L +G+ EA+ + + G + + YT L+ GF + GK AL++ Q
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636
Query: 381 ELISKNVMFDVVAFNVLINGLFK-LGKCDTESIYKVMGDLGLSPDSATYNTMINGNFKKG 440
E++ + V D+V + VLI+G K + + K M D GL PD Y +MI+ K G
Sbjct: 637 EMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Query: 441 NWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAINIVKEMVVMGLYPTLITYR 500
+++ A +W+ M + VP+ +T +INGLC+AG + A + +M + P +TY
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 756
Query: 501 ILLNASSKSR-RADTILQVHKLLVDLHLEVNKDIYNILISNLCKLGMTRKATAVLKDMEK 560
L+ +K +++H ++ L N YN+LI C+ G +A+ ++ M
Sbjct: 757 CFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIG 816
Query: 561 RGILADTITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIETFNLLLGGLSKAGLIRE 620
G+ D ITY +I C + +K+A +++M +G+ P+ +N L+ G AG + +
Sbjct: 817 DGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGK 876
Query: 621 ADDLLNKIKKRGLVPNACTYET 640
A +L N++ ++GL+PN T T
Sbjct: 877 ATELRNEMLRQGLIPNNKTSRT 897
BLAST of CmoCh02G004840 vs. TAIR 10
Match:
AT5G61990.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 290.0 bits (741), Expect = 5.5e-78
Identity = 184/692 (26.59%), Postives = 332/692 (47.98%), Query Frame = 0
Query: 91 LEEALSLYEEMVGSGIFPDVVTYSSILYGLCKHGKLSEGKLLLREMEKMGMHPNDISYSI 150
++ AL L E M+ G+ P TY ++ GLCK +L + K LL EM+ +G+ ++ +YS+
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 151 LLDALFKARKIKEALMTLGCMIVRGNS-----FDLIACTV-------------------- 210
L+D L K R A + M+ G + +D C +
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 211 ----------LIDGFCKNGGIKEAEYIFNNLYQLNLVPNSITYSVLIDGRCKLGDINGAE 270
LI+G+C+ +++ + + + N+V + TY ++ G C GD++GA
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 271 SSLHEMEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAILLDGS 330
+ + EM C PNV+ Y+++I +++ +A VL++M + + P+IF Y L+ G
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL 497
Query: 331 FKAGWQDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGLIPDL 390
KA D A +M + GLK N AF++ + A+ + +M G++P+
Sbjct: 498 SKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Query: 391 VNYTNLMDGFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGLFKLGKC-DTESIYKV 450
V T L++ + K GK A + + ++ + ++ D + VL+NGLFK K D E I++
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 451 MGDLGLSPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLCEAGR 510
M G++PD +Y +ING K GN + A +++EM L P+ I N+++ G C +G
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 511 IENAINIVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLE---VNKDI 570
IE A ++ EM V GL+P +TY +++ KS + + +L ++ L+ + +
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS---GDLAEAFRLFDEMKLKGLVPDSFV 737
Query: 571 YNILISNLCKLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTML 630
Y L+ C+L +A + K+G + T +NALI + + ++
Sbjct: 738 YTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLM 797
Query: 631 SEGV----SPNIETFNLLLGGLSKAGLIREADDLLNKIKKRGLVPNACTYETLMCGHCKV 690
PN T+N+++ L K G + A +L ++++ L+P TY +L+ G+ K+
Sbjct: 798 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 857
Query: 691 GNTKEALRFYCEMVIKGFIPRAGAYNTLIGYFSKMGKMSQAKELMKEMQRK-----GVSP 735
G E + E + G P Y+ +I F K G ++A L+ +M K G
Sbjct: 858 GRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKL 917
BLAST of CmoCh02G004840 vs. TAIR 10
Match:
AT1G62670.1 (rna processing factor 2 )
HSP 1 Score: 281.2 bits (718), Expect = 2.6e-75
Identity = 168/627 (26.79%), Postives = 301/627 (48.01%), Query Frame = 0
Query: 84 SNVRENGLEEALSLYEEMVGSGIFPDVVTYSSILYGLCKHGKLSEGKLLLREMEKMGMHP 143
+ + E L++A++L+ EMV S FP ++ +S +L + K K L +M+ +G+
Sbjct: 55 NGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPH 114
Query: 144 NDISYSILLDALFKARKIKEALMTLGCMIVRGNSFDLIACTVLIDGFCKNGGIKEAEYIF 203
N +YSIL++ + ++ AL LG M+ G +++ + L++G+C + I EA +
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 204 NNLYQLNLVPNSITYSVLIDGRCKLGDINGAESSLHEMEEKDCVPNVITYSSMINGYVKK 263
+ ++ PN++T++ LI G + A + + M K C P+++TY ++NG K+
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 264 GMLWNAFNVLRKMVHKNVMPNIFTYAILLDGSFKAGWQDIALDLYNKMKQRGLKDNVLIL 323
G AFN+L KM + P + Y ++DG K D AL+L+ +M+ +G++ NV+
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 324 DAFVNNLKRSGRMEEAEDLIAKMESGGLIPDLVNYTNLMDGFLKSGKESSALNLAQELIS 383
+ ++ L GR +A L++ M + PD+ ++ L+D F+K GK A L E++
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 384 KNVMFDVVAFNVLINGLFKLGKCDTESIYKVMGDLGLSPDSATYNTMINGNFKKGNWETA 443
+++ P TY+++ING + A
Sbjct: 355 RSI----------------------------------DPSIVTYSSLINGFCMHDRLDEA 414
Query: 444 VQLWNEMKSRKLVPSAITCNLMINGLCEAGRIENAINIVKEMVVMGLYPTLITYRILLNA 503
Q++ M S+ P +T N +I G C+ R+E + + +EM GL +T
Sbjct: 415 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT------- 474
Query: 504 SSKSRRADTILQVHKLLVDLHLEVNKDIYNILISNLCKLGMTRKATAVLKDMEKRGILAD 563
YNILI L + G A + K+M G+ +
Sbjct: 475 ----------------------------YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 534
Query: 564 TITYNALIQGYCISSHLKRAFITFSTMLSEGVSPNIETFNLLLGGLSKAGLIREADDLLN 623
+TYN L+ G C + L++A + F + + P I T+N+++ G+ KAG + + DL
Sbjct: 535 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 594
Query: 624 KIKKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEMVIKGFIPRAGAYNTLIGYFSKMG 683
+ +G+ P+ Y T++ G C+ G+ +EA + EM G +P +G YNTLI + G
Sbjct: 595 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 612
Query: 684 KMSQAKELMKEMQRKGVSPTSSTYDIL 711
+ EL+KEM+ G + +ST ++
Sbjct: 655 DREASAELIKEMRSCGFAGDASTIGLV 612
BLAST of CmoCh02G004840 vs. TAIR 10
Match:
AT1G19290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 275.0 bits (702), Expect = 1.8e-73
Identity = 189/702 (26.92%), Postives = 330/702 (47.01%), Query Frame = 0
Query: 113 YSSILYGLCKHGKLSEGKLLLREMEKMGMHPNDISYSILLDALFKARKIKEALMTLGCMI 172
+ IL + G + + M G P+ +S + LL L + + AL MI
Sbjct: 158 FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMI 217
Query: 173 VRGNSFDLIACTVLIDGFCKNGGIKEA-EYIFNNLYQLNLVPNSITYSVLIDGRCKLGDI 232
S D+ C+++++ +C++G + +A + L L N +TY+ LI+G +GD+
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDV 277
Query: 233 NGAESSLHEMEEKDCVPNVITYSSMINGYVKKGMLWNAFNVLRKMVHKNVMPNIFTYAIL 292
G L M E+ NV+TY+S+I GY KKG++ A +V + K ++ + Y +L
Sbjct: 278 EGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVL 337
Query: 293 LDGSFKAGWQDIALDLYNKMKQRGLKDNVLILDAFVNNLKRSGRMEEAEDLIAKMESGGL 352
+DG + G A+ +++ M + G++ N I ++ +N +SG++ EAE + ++M L
Sbjct: 338 MDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSL 397
Query: 353 IPDLVNYTNLMDGFLKSGKESSALNLAQELISKNVMFDVVAFNVLINGLFKLGKC-DTES 412
PD Y L+DG+ ++G AL L ++ K V+ V+ +N+L+ G ++G D S
Sbjct: 398 KPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLS 457
Query: 413 IYKVMGDLGLSPDSATYNTMINGNFKKGNWETAVQLWNEMKSRKLVPSAITCNLMINGLC 472
++K+M G++ D + +T++ FK G++ A++LW + +R L+ IT N+MI+GLC
Sbjct: 458 LWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLC 517
Query: 473 EAGRIENAINIVKEMVVMGLYPTLITYRILLNASSKSRRADTILQVHKLLVDLHLEVNKD 532
+ ++ A I+ + + P + TY+ L + K V + + + +
Sbjct: 518 KMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIE 577
Query: 533 IYNILISNLCKLGMTRKATAVLKDMEKRGILADTITYNALIQGYCISSHLKRAFITFSTM 592
+YN LIS K K ++ ++ RG+ TY ALI G+C + +A+ T M
Sbjct: 578 MYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM 637
Query: 593 LSEGVSPNIETFNLLLGGLSKAGLIREADDLLNKI------------------------- 652
+ +G++ N+ + + L + I EA LL KI
Sbjct: 638 IEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCL 697
Query: 653 -------------KKRGLVPNACTYETLMCGHCKVGNTKEALRFYCEMVIKG-FIPRAGA 712
K+ LVPN Y + G CK G ++A + + +++ FIP
Sbjct: 698 KTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYT 757
Query: 713 YNTLIGYFSKMGKMSQAKELMKEMQRKGVSPTSSTYDILICGWCKLSKMPELDRTSKVSY 772
Y LI + G +++A L EM KG+ P TY+ LI G CKL +DR
Sbjct: 758 YTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLG---NVDR------ 817
Query: 773 RAEAKRLLNEMNDRGFVPCESTLFCIGSTFAAPGKKADARML 774
A+RLL+++ +G P T + G A+A L
Sbjct: 818 ---AQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRL 847
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LER0 | 2.1e-191 | 45.90 | Pentatricopeptide repeat-containing protein At5g14770, mitochondrial OS=Arabidop... | [more] |
Q9FJE6 | 3.7e-79 | 30.25 | Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th... | [more] |
Q9FIT7 | 7.8e-77 | 26.59 | Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidop... | [more] |
Q9SXD1 | 3.6e-74 | 26.79 | Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... | [more] |
Q9LN69 | 2.6e-72 | 26.92 | Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis th... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1G7D9 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At5g14770, mitochondrial OS=Cucurbit... | [more] |
A0A6J1L1T8 | 0.0e+00 | 97.57 | pentatricopeptide repeat-containing protein At5g14770, mitochondrial isoform X1 ... | [more] |
A0A6J1KZE2 | 0.0e+00 | 97.80 | pentatricopeptide repeat-containing protein At5g14770, mitochondrial isoform X2 ... | [more] |
A0A1S3CI98 | 0.0e+00 | 81.78 | pentatricopeptide repeat-containing protein At5g14770, mitochondrial OS=Cucumis ... | [more] |
A0A5A7VGU7 | 0.0e+00 | 80.48 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
XP_022947610.1 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At5g14770, mitochondrial [Cucurbita ... | [more] |
XP_023534270.1 | 0.0e+00 | 97.96 | pentatricopeptide repeat-containing protein At5g14770, mitochondrial-like [Cucur... | [more] |
XP_023007018.1 | 0.0e+00 | 97.57 | pentatricopeptide repeat-containing protein At5g14770, mitochondrial isoform X1 ... | [more] |
KAG6605167.1 | 0.0e+00 | 99.33 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
KAG7035158.1 | 0.0e+00 | 99.33 | Pentatricopeptide repeat-containing protein, mitochondrial [Cucurbita argyrosper... | [more] |