CmoCh02G004720 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G004720
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein SICKLE isoform X1
Location	Cmo_Chr02: 2547461 .. 2550463 (-)
RNA-Seq Expression	CmoCh02G004720
Synteny	CmoCh02G004720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAATCCGAGAAACGGAGGGAGCGACTGAGAGCAATGCGAATGGAAGCTTCGCAGGCTGATGTCGCTAATTATATCGAAACTTCTCTGCCTAATCATCTTTCCAATCCATTGGTTGAGTCCTCAGCTAACATGCTTGGGCAATCAGAACCATGTACCGCCCCAAGATTTGATTATTACACAAACCCTATGGCTGCATTTTCTTCTAGCAAGAAGAGAGGGAATCAGACTGTGTCTCATGATTATGTTCCTTCCCACCTCAATAGTTCTCCAGATGCTTATGTTCCTTCCCACCTCAATAGTTCTCCGGATGTTTATGTTCCATCAAATTTTCCAGGTAATTTTATGTTTTCTTAAATAATTTGTGGATGGAAAAAAATAAAGGATCATGTATTGGGAATAGGATATCGAGCTACTTGTTTGATGGTGGATGCTTCATTATAAAAGGGTCCAATTACGAATACATGGGTCAAAAATGGCCTAATGTGCCGGGTTATTATGTTCCCCTCCATGGAAAAATGTTACAAAGAAGCTTTCAAATCAATACAGACATGTAATCTATAAACAAAATCTAGTAGAAGGTGCTCCCAACTTGAGGTTGTAAAATGAACTTAGGGTCACAAAAAACTGTCGATTCTTTCTAGTTTGAACCTTTTGAGAGCTTCTGAATATAGAGATGGCTGTAGGGAGATGTTATTAGGAACATTAAATGCTTCTGGTTATGAACAAAGAGCCTGCATCATGGAGCAGTGCAGAAACAAACCAGAGTCTCAAGAATAGCTTGTGTATCCTCTCTACTACTGTGATTAAAACCAAATTCTTTCAAAATCCATGAAACAAACGGGACATTTATAACTTTACTTGCCTGGCTCCTCACACAAAAAGGAAAAAAAATCCACAAGCTATTTGTTTCAGTGGAACTCTCCATAACCTTTTTAAGAGGAAAGGAGAGATTTTCTGCGTGTTGGAGAAAATTCCAACTAGGAAAAGGTGGCTTTGCCATCATTCATGTCAGGCTTTCCCATATAAAACTTTTTGTCGCTTTCTTAATCCGAGCCACTATGGGAGGGATTCTAAGAGAAACATATTGAGAATCAATTATAAAAGCTAGTCATATACTTTTGAGAAAATTAATGATAAAAGTTAGTCTTTCTTCCTTTTATGGTTCTTATTTGGTTTGATGAGCATGAATGTTAAATGTCTAGAGTATTAAGGATATACAATTAGATGTGCTTCTATTAGTGGTTCGGATTTAAATGTATGTTTGTTTTGCAAGCTTTTGATGGGGGAGGTAAATGTATATATTTAACATAAATGCTACATAGCACTCTTTTGTGTAAAATATACTTCTGTAGTTTGATTTTTGTTTCCAATTCAAACTTTCTAATTCCTCCCCATGGTTGGATGCCATGCAATCGTGAAAGCAGTATTTTTTAAATGATAAAAGACATGAGTTTTGTAATATTTCACATCTATCCTATTAGTATTTGCTAATATTTTACATTAAAGTTTATGTGATGTTACTGGTAGAATTGGGAAGTATCTCATATGGCGATCAGCTATAAATTCTTTTATTTCTCATCATGAGTATGTTCTTTCAGCATTTTGTAGTTAGGGAATCACTTTTCTCCTCCAAATCTAGATATAATATTGTGTTGTAGGAATGAGAAACCCTGAAATGTCTCCCTCTGCGCCTCATCAATTCCATCAACATTCACCTGACCAGAGATTCTATGCACGAGGTTATAGTGGATCTGGTGGCCATGGTAGCCCAGCAATGCCCAGGCCTTTTCCTATGGATCAAAGAAGTCCTAATATGTGGGGTGGACCTAGAAGCCCATATGTCAACCACTTTCCCGGCCCTCCCCCAAGGGGGATGAACTCCCCCAGAGGCCCTTTTGTCAACCAATTCCCTAGCCAGCTACCAAGGGATATGAGCTCACCCAGCTTTGTCTCTGGACCAAGAGGTAATTCTTACCCCAATCAAACGCATGACATGGTTAATCACCTCAGTCCAAGTCCTAGTCCTGGATATCAAGGCAGTTCTAGTCCTGGTGGAGGCAGCCATGGTCATCGTGGCAATATGACCCCTAGTCCAAGATTTGGCTCGGGACGAGGTTTTGGTTCTCATGGTCGTCGTTTTTCATCAGACGAATCATCTAGACCAGAACAGTTTTACAATCCATCCATGCTTGAAGATCCCTGGAAGGTTCTGCAACCTGGTATTTGGAGGCCAGTTGCTCCATTGAGAAGTTCTGCCAACCCTTCAGAATCTTGGATTTCAAAATTCAATACGAAAAAAGCAAGAGTTTCAGATGCTTCTTCTGGCAGGTCAGGCTCTCAACCCAGCCTCGCCGAGTATCTCGCTGCTTCCTTCAACGAAGCAGCCAACAACACACCAGGTGAGTAAAAACTCTTATCCAGATATTTCATCCTACTGTAATTCTGAAACTAGGGATTCCCAAAATCCCAGCCTAATTTTTCTCCATACGCTGGTTTAATATGGTAATATTTAAGGTAAATCTGTAGTGACAGTTATATCTCTCCATGTTAGTTTGTGAGTTCTATGAGCTATTTTCTGTTAGCTACATGTTTGTGGACCGTGTTTGACTGATGGACATGATTTAGCTATGCTCGTCTTTATAAAGAATTTAGTAGGATTATGTTATAATAATATTGCTCTGTTTCATCATCTTCTTAATGTGGAACGTATCTGCTGAATTTGATATTTTGAGTAAATGGTGAAAGTTGGGAACTAACCACAAGAGGAGGAAAATATGCAGGGTTGGCCTCTGCTTTTCCACAAGTTATTTTTAAAAAATCTAATGTTCGATTATGTTACGGAGTCTGAAAAGCCTCGAGTAAGAGCAGATGTATAGAACATTTTTAATGAGATGGTGCCTATAGAATCTATTCTATTCTAAACATATATTATGTCATGGTTCGAGTAGGATAGGTCATAAATATCTAAATTTTTTATTTTTAGATTCTTATTTTTGA

mRNA sequence

ATGGAAGAATCCGAGAAACGGAGGGAGCGACTGAGAGCAATGCGAATGGAAGCTTCGCAGGCTGATGTCGCTAATTATATCGAAACTTCTCTGCCTAATCATCTTTCCAATCCATTGGTTGAGTCCTCAGCTAACATGCTTGGGCAATCAGAACCATGTACCGCCCCAAGATTTGATTATTACACAAACCCTATGGCTGCATTTTCTTCTAGCAAGAAGAGAGGGAATCAGACTGTGTCTCATGATTATGTTCCTTCCCACCTCAATAGTTCTCCAGATGCTTATGTTCCTTCCCACCTCAATAGTTCTCCGGATGTTTATGTTCCATCAAATTTTCCAGGAATGAGAAACCCTGAAATGTCTCCCTCTGCGCCTCATCAATTCCATCAACATTCACCTGACCAGAGATTCTATGCACGAGGTTATAGTGGATCTGGTGGCCATGGTAGCCCAGCAATGCCCAGGCCTTTTCCTATGGATCAAAGAAGTCCTAATATGTGGGGTGGACCTAGAAGCCCATATGTCAACCACTTTCCCGGCCCTCCCCCAAGGGGGATGAACTCCCCCAGAGGCCCTTTTGTCAACCAATTCCCTAGCCAGCTACCAAGGGATATGAGCTCACCCAGCTTTGTCTCTGGACCAAGAGGTAATTCTTACCCCAATCAAACGCATGACATGGTTAATCACCTCAGTCCAAGTCCTAGTCCTGGATATCAAGGCAGTTCTAGTCCTGGTGGAGGCAGCCATGGTCATCGTGGCAATATGACCCCTAGTCCAAGATTTGGCTCGGGACGAGGTTTTGGTTCTCATGGTCGTCGTTTTTCATCAGACGAATCATCTAGACCAGAACAGTTTTACAATCCATCCATGCTTGAAGATCCCTGGAAGGTTCTGCAACCTGGTATTTGGAGGCCAGTTGCTCCATTGAGAAGTTCTGCCAACCCTTCAGAATCTTGGATTTCAAAATTCAATACGAAAAAAGCAAGAGTTTCAGATGCTTCTTCTGGCAGGTCAGGCTCTCAACCCAGCCTCGCCGAGTATCTCGCTGCTTCCTTCAACGAAGCAGCCAACAACACACCAGATTCTTATTTTTGA

Coding sequence (CDS)

ATGGAAGAATCCGAGAAACGGAGGGAGCGACTGAGAGCAATGCGAATGGAAGCTTCGCAGGCTGATGTCGCTAATTATATCGAAACTTCTCTGCCTAATCATCTTTCCAATCCATTGGTTGAGTCCTCAGCTAACATGCTTGGGCAATCAGAACCATGTACCGCCCCAAGATTTGATTATTACACAAACCCTATGGCTGCATTTTCTTCTAGCAAGAAGAGAGGGAATCAGACTGTGTCTCATGATTATGTTCCTTCCCACCTCAATAGTTCTCCAGATGCTTATGTTCCTTCCCACCTCAATAGTTCTCCGGATGTTTATGTTCCATCAAATTTTCCAGGAATGAGAAACCCTGAAATGTCTCCCTCTGCGCCTCATCAATTCCATCAACATTCACCTGACCAGAGATTCTATGCACGAGGTTATAGTGGATCTGGTGGCCATGGTAGCCCAGCAATGCCCAGGCCTTTTCCTATGGATCAAAGAAGTCCTAATATGTGGGGTGGACCTAGAAGCCCATATGTCAACCACTTTCCCGGCCCTCCCCCAAGGGGGATGAACTCCCCCAGAGGCCCTTTTGTCAACCAATTCCCTAGCCAGCTACCAAGGGATATGAGCTCACCCAGCTTTGTCTCTGGACCAAGAGGTAATTCTTACCCCAATCAAACGCATGACATGGTTAATCACCTCAGTCCAAGTCCTAGTCCTGGATATCAAGGCAGTTCTAGTCCTGGTGGAGGCAGCCATGGTCATCGTGGCAATATGACCCCTAGTCCAAGATTTGGCTCGGGACGAGGTTTTGGTTCTCATGGTCGTCGTTTTTCATCAGACGAATCATCTAGACCAGAACAGTTTTACAATCCATCCATGCTTGAAGATCCCTGGAAGGTTCTGCAACCTGGTATTTGGAGGCCAGTTGCTCCATTGAGAAGTTCTGCCAACCCTTCAGAATCTTGGATTTCAAAATTCAATACGAAAAAAGCAAGAGTTTCAGATGCTTCTTCTGGCAGGTCAGGCTCTCAACCCAGCCTCGCCGAGTATCTCGCTGCTTCCTTCAACGAAGCAGCCAACAACACACCAGATTCTTATTTTTGA

Protein sequence

MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTPDSYF

Homology

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BLAST of CmoCh02G004720 vs. ExPASy Swiss-Prot
Match: Q9SB47 (Protein SICKLE OS=Arabidopsis thaliana OX=3702 GN=SIC PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.6e-24
Identity = 131/363 (36.09%), Postives = 178/363 (49.04%), Query Frame = 0


Query: 1   MEESEKRRERLRAMRMEA---SQADVANYIETSL-PNHLSNPLVESSANMLGQSEPCTAP 60
           ME+SEKR++ L+AMRMEA   +  D     ETS+   HLSNPL E+S +   Q +     
Sbjct: 1   MEDSEKRKQMLKAMRMEAAAQNDDDATTGTETSMSTGHLSNPLAETSNH---QQDSFETQ 60

Query: 61  RFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMR 120
           RFDYYT+PMAA+SS KK  N+T    Y+ S          PSH  SSP   VP  FP   
Sbjct: 61  RFDYYTDPMAAYSSFKK--NKTPKQQYISS----------PSHQGSSP---VPPQFP--- 120

Query: 121 NPEMSP-SAPHQFHQHSPDQRFYARGYSGSG-GHGSPAMPRPFPMDQRSPNMWGGP-RSP 180
            P + P S   ++   +    F+A  Y   G  H SP+   P       P  W    R P
Sbjct: 121 -PSVPPGSLCSEYQAQTNHGGFHAAHYEPRGMAHLSPSHRGP-------PAGWNNNFRPP 180

Query: 181 YVNHFPGPPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPS 240
            VNH    PP+ +  P  PF  + P     +M +  F  G RG SY N      N+   +
Sbjct: 181 PVNH--SGPPQWVPRP-FPFSQEMP-----NMGNNRF--GGRG-SYNNTPPQFSNYGRQN 240

Query: 241 PSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLED 300
            + G  G++ P  G    RG        G    FG  G R   +  +  E+FY+ SM ED
Sbjct: 241 ANWG--GNTYPNSGRGRSRGR-------GMNTSFGRDGGRRPMEPGA--ERFYSNSMAED 300

Query: 301 PWKVLQPGIWRPVAPLRSSANPSESWISK-FNTKKARVSDASSGRSGSQPSLAEYLAASF 356
           PWK L+P +W+  +   SS++  ++W+ K    KK+  S+A+   S +Q SLAEYLAAS 
Sbjct: 301 PWKHLKPVLWKNCSDASSSSSTGQAWLPKSIAPKKSVTSEATHKTSSNQQSLAEYLAASL 312

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BLAST of CmoCh02G004720 vs. ExPASy TrEMBL
Match: A0A6J1G5T4 (protein SICKLE isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451145 PE=4 SV=1)

HSP 1 Score: 727.6 bits (1877), Expect = 2.5e-206
Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0


Query: 1   MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY 60
           MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY
Sbjct: 1   MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY 60

Query: 61  YTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMRNPEM 120
           YTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMRNPEM
Sbjct: 61  YTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMRNPEM 120

Query: 121 SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG 180
           SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG
Sbjct: 121 SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG 180

Query: 181 PPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQG 240
           PPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQG
Sbjct: 181 PPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQG 240

Query: 241 SSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP 300
           SSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP
Sbjct: 241 SSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP 300

Query: 301 GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP 360
           GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP
Sbjct: 301 GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP 360

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BLAST of CmoCh02G004720 vs. ExPASy TrEMBL
Match: A0A6J1G649 (protein SICKLE isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451145 PE=4 SV=1)

HSP 1 Score: 694.5 bits (1791), Expect = 2.4e-196
Identity = 348/360 (96.67%), Postives = 348/360 (96.67%), Query Frame = 0


Query: 1   MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY 60
           MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY
Sbjct: 1   MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY 60

Query: 61  YTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMRNPEM 120
           YTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDA            YVPSNFPGMRNPEM
Sbjct: 61  YTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDA------------YVPSNFPGMRNPEM 120

Query: 121 SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG 180
           SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG
Sbjct: 121 SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG 180

Query: 181 PPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQG 240
           PPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQG
Sbjct: 181 PPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQG 240

Query: 241 SSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP 300
           SSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP
Sbjct: 241 SSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP 300

Query: 301 GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP 360
           GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP
Sbjct: 301 GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP 348

[Close]

BLAST of CmoCh02G004720 vs. ExPASy TrEMBL
Match: A0A6J1KYW0 (protein SICKLE isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499971 PE=4 SV=1)

HSP 1 Score: 665.6 bits (1716), Expect = 1.2e-187
Identity = 338/367 (92.10%), Postives = 342/367 (93.19%), Query Frame = 0


Query: 1   MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY 60
           MEESEKRRERLRAMRMEASQADVANY+ETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY
Sbjct: 6   MEESEKRRERLRAMRMEASQADVANYVETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY 65

Query: 61  YTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMRNPEM 120
           YTNPMAAFSSSKKRGNQTVSH            AYVPSHLNSSPD YVPSNFPGMRNPEM
Sbjct: 66  YTNPMAAFSSSKKRGNQTVSH------------AYVPSHLNSSPDAYVPSNFPGMRNPEM 125

Query: 121 SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG 180
           SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG
Sbjct: 126 SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG 185

Query: 181 PPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSP------ 240
           PPPR MNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYP+QT DMVNHLSPSP      
Sbjct: 186 PPPRVMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPSQTQDMVNHLSPSPSPGYQG 245

Query: 241 --SPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLE 300
             SPGYQGSSSPGGGSHGHRGNMTPSPRFG GRGFGSHGRRFSSD+SSRPEQFY+PSMLE
Sbjct: 246 SSSPGYQGSSSPGGGSHGHRGNMTPSPRFGLGRGFGSHGRRFSSDKSSRPEQFYDPSMLE 305

Query: 301 DPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASF 360
           DPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARV DASSGRSGSQPSLAEYLAASF
Sbjct: 306 DPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARVLDASSGRSGSQPSLAEYLAASF 360

[Close]

BLAST of CmoCh02G004720 vs. ExPASy TrEMBL
Match: A0A6J1L0Q3 (protein SICKLE isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499971 PE=4 SV=1)

HSP 1 Score: 665.6 bits (1716), Expect = 1.2e-187
Identity = 338/367 (92.10%), Postives = 342/367 (93.19%), Query Frame = 0


Query: 1   MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY 60
           MEESEKRRERLRAMRMEASQADVANY+ETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY
Sbjct: 1   MEESEKRRERLRAMRMEASQADVANYVETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY 60

Query: 61  YTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMRNPEM 120
           YTNPMAAFSSSKKRGNQTVSH            AYVPSHLNSSPD YVPSNFPGMRNPEM
Sbjct: 61  YTNPMAAFSSSKKRGNQTVSH------------AYVPSHLNSSPDAYVPSNFPGMRNPEM 120

Query: 121 SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG 180
           SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG
Sbjct: 121 SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG 180

Query: 181 PPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSP------ 240
           PPPR MNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYP+QT DMVNHLSPSP      
Sbjct: 181 PPPRVMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPSQTQDMVNHLSPSPSPGYQG 240

Query: 241 --SPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLE 300
             SPGYQGSSSPGGGSHGHRGNMTPSPRFG GRGFGSHGRRFSSD+SSRPEQFY+PSMLE
Sbjct: 241 SSSPGYQGSSSPGGGSHGHRGNMTPSPRFGLGRGFGSHGRRFSSDKSSRPEQFYDPSMLE 300

Query: 301 DPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASF 360
           DPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARV DASSGRSGSQPSLAEYLAASF
Sbjct: 301 DPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARVLDASSGRSGSQPSLAEYLAASF 355

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BLAST of CmoCh02G004720 vs. ExPASy TrEMBL
Match: A0A5D3C828 (ACT11D09.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold70G00240 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 3.4e-118
Identity = 241/367 (65.67%), Postives = 269/367 (73.30%), Query Frame = 0


Query: 1   MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY 60
           MEESEKRRERLRAMRMEA+QADV NYIETSLPNHLSNPLVESSA M+GQ  PCTAPRFDY
Sbjct: 1   MEESEKRRERLRAMRMEAAQADVVNYIETSLPNHLSNPLVESSATMVGQLAPCTAPRFDY 60

Query: 61  YTNPMAAFSSSKKRG---NQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMRN 120
           YTNPMAAFS+SKK+G   NQ VS            D +VP H N+S   Y+P  FPG+RN
Sbjct: 61  YTNPMAAFSTSKKKGKIENQPVS------------DTFVPYHHNTSSTTYLPPTFPGLRN 120

Query: 121 PEMSPSAPHQFHQHSPDQR-FYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVN 180
           PEMSPS+ HQFHQ+SPDQR FYARG S +GGHGSP MPRP+ ++Q  P+MW GPR     
Sbjct: 121 PEMSPSSTHQFHQYSPDQRTFYARGDSEAGGHGSPGMPRPYAVNQGDPHMWRGPRR---- 180

Query: 181 HFPGPPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSP 240
                          PFVNQFP+  PR+M+S S VSGPRGNSY N T D   + S SP+P
Sbjct: 181 ---------------PFVNQFPTHPPREMNSSSHVSGPRGNSYTNPTQDRAKYRSSSPNP 240

Query: 241 GYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWK 300
           G+ GS SPG GSHGH GNMTPSPRFG GRG G HGR    D+S  PEQFYN SMLEDPWK
Sbjct: 241 GFHGSLSPGRGSHGHHGNMTPSPRFGYGRGTGFHGRHSLLDKSG-PEQFYNVSMLEDPWK 300

Query: 301 VLQPGIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGS-QPSLAEYLAASFNEA 360
           VLQP IW  +    +SA PSESWISKF TKKARVSD+SSGRS S QPSLAEYLAASF EA
Sbjct: 301 VLQPCIWTTIDSSSNSAKPSESWISKFGTKKARVSDSSSGRSSSQQPSLAEYLAASFKEA 335

Query: 361 ANNTPDS 363
             + P++
Sbjct: 361 IEDAPNA 335

[Close]

BLAST of CmoCh02G004720 vs. NCBI nr
Match: XP_022947202.1 (protein SICKLE isoform X1 [Cucurbita moschata] >XP_022947203.1 protein SICKLE isoform X1 [Cucurbita moschata] >XP_022947205.1 protein SICKLE isoform X1 [Cucurbita moschata] >XP_022947206.1 protein SICKLE isoform X1 [Cucurbita moschata] >XP_022947207.1 protein SICKLE isoform X1 [Cucurbita moschata] >XP_022947208.1 protein SICKLE isoform X1 [Cucurbita moschata])

HSP 1 Score: 727.6 bits (1877), Expect = 5.2e-206
Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0


Query: 1   MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY 60
           MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY
Sbjct: 1   MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY 60

Query: 61  YTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMRNPEM 120
           YTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMRNPEM
Sbjct: 61  YTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMRNPEM 120

Query: 121 SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG 180
           SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG
Sbjct: 121 SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG 180

Query: 181 PPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQG 240
           PPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQG
Sbjct: 181 PPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQG 240

Query: 241 SSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP 300
           SSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP
Sbjct: 241 SSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP 300

Query: 301 GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP 360
           GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP
Sbjct: 301 GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP 360

[Close]

BLAST of CmoCh02G004720 vs. NCBI nr
Match: XP_023533680.1 (protein SICKLE [Cucurbita pepo subsp. pepo] >XP_023533681.1 protein SICKLE [Cucurbita pepo subsp. pepo] >XP_023533682.1 protein SICKLE [Cucurbita pepo subsp. pepo] >XP_023533683.1 protein SICKLE [Cucurbita pepo subsp. pepo] >XP_023533684.1 protein SICKLE [Cucurbita pepo subsp. pepo])

HSP 1 Score: 714.9 bits (1844), Expect = 3.5e-202
Identity = 354/360 (98.33%), Postives = 355/360 (98.61%), Query Frame = 0


Query: 1   MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY 60
           MEESEKRRERLRAMRMEASQADVANY+ETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY
Sbjct: 1   MEESEKRRERLRAMRMEASQADVANYVETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY 60

Query: 61  YTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMRNPEM 120
           YTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPD YVPSHLNSSPDVYVPSNFPGMRNPEM
Sbjct: 61  YTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDVYVPSHLNSSPDVYVPSNFPGMRNPEM 120

Query: 121 SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG 180
           SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG
Sbjct: 121 SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG 180

Query: 181 PPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQG 240
           PPPRGMNSPRGPFVNQFPSQLPRDM SPSFVSGPRGNSYPNQT DMVNHLSPSPSPGYQG
Sbjct: 181 PPPRGMNSPRGPFVNQFPSQLPRDMISPSFVSGPRGNSYPNQTQDMVNHLSPSPSPGYQG 240

Query: 241 SSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP 300
           SSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP
Sbjct: 241 SSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP 300

Query: 301 GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP 360
           GIWRPVAPLRSSAN SESWISKFNTKKARVSDASSGRS SQPSLAEYLAASFNEAANNTP
Sbjct: 301 GIWRPVAPLRSSANTSESWISKFNTKKARVSDASSGRSSSQPSLAEYLAASFNEAANNTP 360

[Close]

BLAST of CmoCh02G004720 vs. NCBI nr
Match: XP_022947209.1 (protein SICKLE isoform X2 [Cucurbita moschata])

HSP 1 Score: 694.5 bits (1791), Expect = 4.9e-196
Identity = 348/360 (96.67%), Postives = 348/360 (96.67%), Query Frame = 0


Query: 1   MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY 60
           MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY
Sbjct: 1   MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY 60

Query: 61  YTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMRNPEM 120
           YTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDA            YVPSNFPGMRNPEM
Sbjct: 61  YTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDA------------YVPSNFPGMRNPEM 120

Query: 121 SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG 180
           SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG
Sbjct: 121 SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG 180

Query: 181 PPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQG 240
           PPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQG
Sbjct: 181 PPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQG 240

Query: 241 SSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP 300
           SSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP
Sbjct: 241 SSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQP 300

Query: 301 GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP 360
           GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP
Sbjct: 301 GIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP 348

[Close]

BLAST of CmoCh02G004720 vs. NCBI nr
Match: KAG6605152.1 (Peptidyl-tRNA hydrolase 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 694.5 bits (1791), Expect = 4.9e-196
Identity = 340/347 (97.98%), Postives = 344/347 (99.14%), Query Frame = 0


Query: 14  MRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDYYTNPMAAFSSSKK 73
           MRMEASQADVAN++ETSLPNHLSNPLV+SSANMLGQSEPCTAPRFDYYTNPMAAFSSSKK
Sbjct: 1   MRMEASQADVANFVETSLPNHLSNPLVDSSANMLGQSEPCTAPRFDYYTNPMAAFSSSKK 60

Query: 74  RGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSP 133
           RGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSP
Sbjct: 61  RGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMRNPEMSPSAPHQFHQHSP 120

Query: 134 DQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPF 193
           DQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPF
Sbjct: 121 DQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPGPPPRGMNSPRGPF 180

Query: 194 VNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSPSPGYQGSSSPGGGSHGHRG 253
           VNQFPSQLPRDMSSPSFVSGPRGNSYPNQT DMVNHLSPSPSPGYQGSSSPGGGSHGHRG
Sbjct: 181 VNQFPSQLPRDMSSPSFVSGPRGNSYPNQTQDMVNHLSPSPSPGYQGSSSPGGGSHGHRG 240

Query: 254 NMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLEDPWKVLQPGIWRPVAPLRSSA 313
           NMTPSPRFGSGRGFGSHG RFSSDESSRPEQFYNPSMLEDPWKVLQPGIWRPVAPLRSSA
Sbjct: 241 NMTPSPRFGSGRGFGSHGHRFSSDESSRPEQFYNPSMLEDPWKVLQPGIWRPVAPLRSSA 300

Query: 314 NPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP 361
           N SESWISKFN+KKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP
Sbjct: 301 NSSESWISKFNSKKARVSDASSGRSGSQPSLAEYLAASFNEAANNTP 347

[Close]

BLAST of CmoCh02G004720 vs. NCBI nr
Match: XP_023007497.1 (protein SICKLE isoform X1 [Cucurbita maxima] >XP_023007498.1 protein SICKLE isoform X1 [Cucurbita maxima] >XP_023007499.1 protein SICKLE isoform X1 [Cucurbita maxima])

HSP 1 Score: 665.6 bits (1716), Expect = 2.4e-187
Identity = 338/367 (92.10%), Postives = 342/367 (93.19%), Query Frame = 0


Query: 1   MEESEKRRERLRAMRMEASQADVANYIETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY 60
           MEESEKRRERLRAMRMEASQADVANY+ETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY
Sbjct: 6   MEESEKRRERLRAMRMEASQADVANYVETSLPNHLSNPLVESSANMLGQSEPCTAPRFDY 65

Query: 61  YTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMRNPEM 120
           YTNPMAAFSSSKKRGNQTVSH            AYVPSHLNSSPD YVPSNFPGMRNPEM
Sbjct: 66  YTNPMAAFSSSKKRGNQTVSH------------AYVPSHLNSSPDAYVPSNFPGMRNPEM 125

Query: 121 SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG 180
           SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG
Sbjct: 126 SPSAPHQFHQHSPDQRFYARGYSGSGGHGSPAMPRPFPMDQRSPNMWGGPRSPYVNHFPG 185

Query: 181 PPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPSP------ 240
           PPPR MNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYP+QT DMVNHLSPSP      
Sbjct: 186 PPPRVMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPSQTQDMVNHLSPSPSPGYQG 245

Query: 241 --SPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLE 300
             SPGYQGSSSPGGGSHGHRGNMTPSPRFG GRGFGSHGRRFSSD+SSRPEQFY+PSMLE
Sbjct: 246 SSSPGYQGSSSPGGGSHGHRGNMTPSPRFGLGRGFGSHGRRFSSDKSSRPEQFYDPSMLE 305

Query: 301 DPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARVSDASSGRSGSQPSLAEYLAASF 360
           DPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARV DASSGRSGSQPSLAEYLAASF
Sbjct: 306 DPWKVLQPGIWRPVAPLRSSANPSESWISKFNTKKARVLDASSGRSGSQPSLAEYLAASF 360

[Close]

BLAST of CmoCh02G004720 vs. TAIR 10
Match: AT4G24500.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-25
Identity = 131/363 (36.09%), Postives = 178/363 (49.04%), Query Frame = 0


Query: 1   MEESEKRRERLRAMRMEA---SQADVANYIETSL-PNHLSNPLVESSANMLGQSEPCTAP 60
           ME+SEKR++ L+AMRMEA   +  D     ETS+   HLSNPL E+S +   Q +     
Sbjct: 1   MEDSEKRKQMLKAMRMEAAAQNDDDATTGTETSMSTGHLSNPLAETSNH---QQDSFETQ 60

Query: 61  RFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMR 120
           RFDYYT+PMAA+SS KK  N+T    Y+ S          PSH  SSP   VP  FP   
Sbjct: 61  RFDYYTDPMAAYSSFKK--NKTPKQQYISS----------PSHQGSSP---VPPQFP--- 120

Query: 121 NPEMSP-SAPHQFHQHSPDQRFYARGYSGSG-GHGSPAMPRPFPMDQRSPNMWGGP-RSP 180
            P + P S   ++   +    F+A  Y   G  H SP+   P       P  W    R P
Sbjct: 121 -PSVPPGSLCSEYQAQTNHGGFHAAHYEPRGMAHLSPSHRGP-------PAGWNNNFRPP 180

Query: 181 YVNHFPGPPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPS 240
            VNH    PP+ +  P  PF  + P     +M +  F  G RG SY N      N+   +
Sbjct: 181 PVNH--SGPPQWVPRP-FPFSQEMP-----NMGNNRF--GGRG-SYNNTPPQFSNYGRQN 240

Query: 241 PSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLED 300
            + G  G++ P  G    RG        G    FG  G R   +  +  E+FY+ SM ED
Sbjct: 241 ANWG--GNTYPNSGRGRSRGR-------GMNTSFGRDGGRRPMEPGA--ERFYSNSMAED 300

Query: 301 PWKVLQPGIWRPVAPLRSSANPSESWISK-FNTKKARVSDASSGRSGSQPSLAEYLAASF 356
           PWK L+P +W+  +   SS++  ++W+ K    KK+  S+A+   S +Q SLAEYLAAS 
Sbjct: 301 PWKHLKPVLWKNCSDASSSSSTGQAWLPKSIAPKKSVTSEATHKTSSNQQSLAEYLAASL 312

[Close]

BLAST of CmoCh02G004720 vs. TAIR 10
Match: AT4G24500.3 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-25
Identity = 131/363 (36.09%), Postives = 178/363 (49.04%), Query Frame = 0


Query: 1   MEESEKRRERLRAMRMEA---SQADVANYIETSL-PNHLSNPLVESSANMLGQSEPCTAP 60
           ME+SEKR++ L+AMRMEA   +  D     ETS+   HLSNPL E+S +   Q +     
Sbjct: 1   MEDSEKRKQMLKAMRMEAAAQNDDDATTGTETSMSTGHLSNPLAETSNH---QQDSFETQ 60

Query: 61  RFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAYVPSHLNSSPDVYVPSNFPGMR 120
           RFDYYT+PMAA+SS KK  N+T    Y+ S          PSH  SSP   VP  FP   
Sbjct: 61  RFDYYTDPMAAYSSFKK--NKTPKQQYISS----------PSHQGSSP---VPPQFP--- 120

Query: 121 NPEMSP-SAPHQFHQHSPDQRFYARGYSGSG-GHGSPAMPRPFPMDQRSPNMWGGP-RSP 180
            P + P S   ++   +    F+A  Y   G  H SP+   P       P  W    R P
Sbjct: 121 -PSVPPGSLCSEYQAQTNHGGFHAAHYEPRGMAHLSPSHRGP-------PAGWNNNFRPP 180

Query: 181 YVNHFPGPPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSPS 240
            VNH    PP+ +  P  PF  + P     +M +  F  G RG SY N      N+   +
Sbjct: 181 PVNH--SGPPQWVPRP-FPFSQEMP-----NMGNNRF--GGRG-SYNNTPPQFSNYGRQN 240

Query: 241 PSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLED 300
            + G  G++ P  G    RG        G    FG  G R   +  +  E+FY+ SM ED
Sbjct: 241 ANWG--GNTYPNSGRGRSRGR-------GMNTSFGRDGGRRPMEPGA--ERFYSNSMAED 300

Query: 301 PWKVLQPGIWRPVAPLRSSANPSESWISK-FNTKKARVSDASSGRSGSQPSLAEYLAASF 356
           PWK L+P +W+  +   SS++  ++W+ K    KK+  S+A+   S +Q SLAEYLAAS 
Sbjct: 301 PWKHLKPVLWKNCSDASSSSSTGQAWLPKSIAPKKSVTSEATHKTSSNQQSLAEYLAASL 312

[Close]

BLAST of CmoCh02G004720 vs. TAIR 10
Match: AT4G24500.2 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 72.0 bits (175), Expect = 1.1e-12
Identity = 113/364 (31.04%), Postives = 156/364 (42.86%), Query Frame = 0


Query: 1   MEESEKRRERLRAMRMEA---SQADVANYIETSL-PNHLSNPLVESSANMLGQSEPCTAP 60
           ME+SEKR++ L+AMRMEA   +  D     ETS+   HLSNPL E+S             
Sbjct: 1   MEDSEKRKQMLKAMRMEAAAQNDDDATTGTETSMSTGHLSNPLAETS------------- 60

Query: 61  RFDYYTNPMAAFSSSKKRGNQTVSHDYVPSHLNSSPDAY-VPSHLNSSPDVYVPSNFPGM 120
                                           N   D++   SH  SSP   VP  FP  
Sbjct: 61  --------------------------------NHQQDSFETQSHQGSSP---VPPQFP-- 120

Query: 121 RNPEMSP-SAPHQFHQHSPDQRFYARGYSGSG-GHGSPAMPRPFPMDQRSPNMWGGP-RS 180
             P + P S   ++   +    F+A  Y   G  H SP+   P       P  W    R 
Sbjct: 121 --PSVPPGSLCSEYQAQTNHGGFHAAHYEPRGMAHLSPSHRGP-------PAGWNNNFRP 180

Query: 181 PYVNHFPGPPPRGMNSPRGPFVNQFPSQLPRDMSSPSFVSGPRGNSYPNQTHDMVNHLSP 240
           P VNH    PP+ +  P  PF  + P     +M +  F  G RG SY N      N+   
Sbjct: 181 PPVNH--SGPPQWVPRP-FPFSQEMP-----NMGNNRF--GGRG-SYNNTPPQFSNYGRQ 240

Query: 241 SPSPGYQGSSSPGGGSHGHRGNMTPSPRFGSGRGFGSHGRRFSSDESSRPEQFYNPSMLE 300
           + + G  G++ P  G    RG        G    FG  G R   +  +  E+FY+ SM E
Sbjct: 241 NANWG--GNTYPNSGRGRSRGR-------GMNTSFGRDGGRRPMEPGA--ERFYSNSMAE 283

Query: 301 DPWKVLQPGIWRPVAPLRSSANPSESWISK-FNTKKARVSDASSGRSGSQPSLAEYLAAS 356
           DPWK L+P +W+  +   SS++  ++W+ K    KK+  S+A+   S +Q SLAEYLAAS
Sbjct: 301 DPWKHLKPVLWKNCSDASSSSSTGQAWLPKSIAPKKSVTSEATHKTSSNQQSLAEYLAAS 283

The following BLAST results are available for this feature:

BLAST of CmoCh02G004720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SB47	1.6e-24	36.09	Protein SICKLE OS=Arabidopsis thaliana OX=3702 GN=SIC PE=1 SV=1	[more]

BLAST of CmoCh02G004720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G5T4	2.5e-206	100.00	protein SICKLE isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451145 PE=4 SV=...	[more]
A0A6J1G649	2.4e-196	96.67	protein SICKLE isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451145 PE=4 SV=...	[more]
A0A6J1KYW0	1.2e-187	92.10	protein SICKLE isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499971 PE=4 SV=1	[more]
A0A6J1L0Q3	1.2e-187	92.10	protein SICKLE isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499971 PE=4 SV=1	[more]
A0A5D3C828	3.4e-118	65.67	ACT11D09.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold70G00240 PE=4...	[more]

BLAST of CmoCh02G004720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947202.1	5.2e-206	100.00	protein SICKLE isoform X1 [Cucurbita moschata] >XP_022947203.1 protein SICKLE is...	[more]
XP_023533680.1	3.5e-202	98.33	protein SICKLE [Cucurbita pepo subsp. pepo] >XP_023533681.1 protein SICKLE [Cucu...	[more]
XP_022947209.1	4.9e-196	96.67	protein SICKLE isoform X2 [Cucurbita moschata]	[more]
KAG6605152.1	4.9e-196	97.98	Peptidyl-tRNA hydrolase 2, mitochondrial, partial [Cucurbita argyrosperma subsp....	[more]
XP_023007497.1	2.4e-187	92.10	protein SICKLE isoform X1 [Cucurbita maxima] >XP_023007498.1 protein SICKLE isof...	[more]

BLAST of CmoCh02G004720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24500.1	1.1e-25	36.09	hydroxyproline-rich glycoprotein family protein	[more]
AT4G24500.3	1.1e-25	36.09	hydroxyproline-rich glycoprotein family protein	[more]
AT4G24500.2	1.1e-12	31.04	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..288
IPR039292	Protein SICKLE	PANTHER	PTHR36054	PROTEIN SICKLE	coord: 1..360

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G004720.1	CmoCh02G004720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:1903730	regulation of phosphatidate phosphatase activity
cellular_component	GO:0016020	membrane