CmoCh02G004290 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCAATGGTAGAATCATGGATGAGCGAGCTGGGGAAATGGAAGAACAGAGTCGAAGCTCAAAAGAAGAAGCCATTGATGCCCAAATCCAAGCTTTGTCACCAGCGAGACCTCAAAGAATCCGAAAACAACCTTGTCATCTCTGCAGATTCCGATGACCGAGAAGCAACCTTGTCGGATTCCACCATTTGTTTGCTCATCGATCGCTTTGCTCCCTTGTGA ATGGCAGCAATGGTAGAATCATGGATGAGCGAGCTGGGGAAATGGAAGAACAGAGTCGAAGCTCAAAAGAAGAAGCCATTGATGCCCAAATCCAAGCTTTGTCACCAGCGAGACCTCAAAGAATCCGAAAACAACCTTGTCATCTCTGCAGATTCCGATGACCGAGAAGCAACCTTGTCGGATTCCACCATTTGTTTGCTCATCGATCGCTTTGCTCCCTTGTGA ATGGCAGCAATGGTAGAATCATGGATGAGCGAGCTGGGGAAATGGAAGAACAGAGTCGAAGCTCAAAAGAAGAAGCCATTGATGCCCAAATCCAAGCTTTGTCACCAGCGAGACCTCAAAGAATCCGAAAACAACCTTGTCATCTCTGCAGATTCCGATGACCGAGAAGCAACCTTGTCGGATTCCACCATTTGTTTGCTCATCGATCGCTTTGCTCCCTTGTGA MAAMVESWMSELGKWKNRVEAQKKKPLMPKSKLCHQRDLKESENNLVISADSDDREATLSDSTICLLIDRFAPL Homology
BLAST of CmoCh02G004290 vs. ExPASy TrEMBL
Match: A0A0A0LP24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237740 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 5.1e-13 Identity = 50/78 (64.10%), Postives = 57/78 (73.08%), Query Frame = 0
BLAST of CmoCh02G004290 vs. ExPASy TrEMBL
Match: A0A7N2MYN0 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.3e-04 Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0
BLAST of CmoCh02G004290 vs. ExPASy TrEMBL
Match: A0A072VH50 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_1g034290 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 9.6e-04 Identity = 33/73 (45.21%), Postives = 42/73 (57.53%), Query Frame = 0
BLAST of CmoCh02G004290 vs. NCBI nr
Match: KAG6605111.1 (hypothetical protein SDJN03_02428, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 125.9 bits (315), Expect = 1.4e-25 Identity = 65/69 (94.20%), Postives = 66/69 (95.65%), Query Frame = 0
BLAST of CmoCh02G004290 vs. NCBI nr
Match: KGN61756.1 (hypothetical protein Csa_006080 [Cucumis sativus]) HSP 1 Score: 83.2 bits (204), Expect = 1.0e-12 Identity = 50/78 (64.10%), Postives = 57/78 (73.08%), Query Frame = 0
BLAST of CmoCh02G004290 vs. NCBI nr
Match: KAG6571144.1 (hypothetical protein SDJN03_30059, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 82.4 bits (202), Expect = 1.8e-12 Identity = 50/75 (66.67%), Postives = 54/75 (72.00%), Query Frame = 0
BLAST of CmoCh02G004290 vs. NCBI nr
Match: KAF3950820.1 (hypothetical protein CMV_023471 [Castanea mollissima]) HSP 1 Score: 55.1 bits (131), Expect = 3.0e-04 Identity = 31/73 (42.47%), Postives = 46/73 (63.01%), Query Frame = 0
BLAST of CmoCh02G004290 vs. NCBI nr
Match: KAF3947726.1 (hypothetical protein CMV_026176 [Castanea mollissima]) HSP 1 Score: 53.5 bits (127), Expect = 8.9e-04 Identity = 30/73 (41.10%), Postives = 45/73 (61.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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