CmoCh02G004130 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G004130
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	Cmo_Chr02: 2134974 .. 2138994 (-)
RNA-Seq Expression	CmoCh02G004130
Synteny	CmoCh02G004130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGTCAGTGAAGCTCGAGAACGCAGCGCCATTCCCACAAGCTTTGCTCGCCATGGTAGTAGCTTCAGCTTTTACTGCATCTCTCTGTTTCTCTGTCTCTTCGCACAATAGAGCATCTTCCGTTCCTCAGCTTTCTCGCCGGTAATGCATTTTCTATTCCTGGTTCATTTGCCTAATCCCCTCTGCAACTCTTTTAAGTTTTTTCCTCTCTTTTCTGGTTCCTTTGTGTAGAAATTCACGCAGGTCGATAGTTTCTGCCATCCCGAGACCGTATGGAGACTCTTCAACAATTGGTAATCGGTTTTCTGCAATTGATGTTTCTGAATTTTTGTATGTGCGGATATGAATGCCCTAATTTTGTAGCGGAGGAATTCATTTTTGCAGGAACTAAGTTGTTCCTACTTTCTAATATCCATTTCACCATGTTTACAACTCGATATCAATTCTCTGATAATTTTTGTTTTTTTCTTTTCTGTATTTATTGATGTACATGATCGAAATTGCACTTATGTGGATGCATTGAATTATGTATATGACTATGTGGACTTCTCTCTCCCTTTTGAAGGATTATCGAGCAAAACAGTTGGGGCACCTTTAAACCTCGACGAAGATTTTCTTCACACCAGTACAAGGTTTGCATTGTTCCCCATTTCTTGTTTCTAGCATTTACCGAATGTTTATTTATTGGCATAACCATTTTTTGAAAGGTAATATAATTTGGATTGCATATCTCAAATTGGGATGAATGTAAATTTTTTCTATGCAACACTATCTTTTGTTTAGCATTCCTTTATATTTTACCTTTCTTTTCCCTTAACAAGATATTATGCCTTCGAATTTTATTCCTTTAACCTGCTGAAAGAATTAATCTGATGGGCATTTTCACTTTTGTGCAGTTATGGACCTATAATGGCCAAGAAAGGCAATCCACCAATTATGCCTGCAGTGATGACACCAGGAGGGCCTTTGAATCTCTCTTCTGTGTTATTTAGGAATCGTATCATATTTATTGGTCAACCCATCAACTCCAACGTTGCACAGCGAGTTATATCACAGCTTGTGACACTAGCAACCATTGATGAGGAGTCGGATATCCTGGTGGGCAAAAACATAAATAAGCCGCCTTTTTTCCCCCTATCTGTTACTCTAGATTTTGATTCTTTGTTTTAAATTTGTCTGTAAACCTAGTTGTTGACCTTATTAGGTATATCTGAATTGCCCTGGTGGAAGTACCTACTCAATATTAGCAATTTATGATTGCATGTCTTGGGTAAGATTGCAGAACTCTCTCTCTATCTCTCTTACCTTTTTTGTTTAGTTCTTTTAAGCCTTATTATTATTTTGTATGTTACTTCTGCATCCACATTTTCAGTTATTAATTTTGATATTGAGGGTCTTTCTGATGCTTCAATGTTCACAAAATCAACGAGCTGTTATGGGGTAGCAATATCTGCTATGCTACATGCTTTAGTCTTGCATTAGATCATAGTAACTATCATTAGCTATATAAGACATATAATTCAAACATATAATGCATTGTTCTGATTTGGTTTGCTGTTTAGAGCAACCAGCCATCACCTCCTATTGATCTATCTATATTTTGAATATGAAAGGAAGAGGATACTTTTCTCATAAGAGATAATTGACTCATGCTATCAGATAAAGCCTAAGGTTGGCACAGTGTGCTTCGGAGTTGCTGCAAGCCAAGGGGCTCTTCTCCTTGCAGGTGGAGAAAAGGGAATGCGCTATGCTATGCCAAATTCTCGAATTATGATACATCAGCCACAAAGTGGATGTGGGGTATGGTTAAATTTTTATTACAATCTGAGCTTATCATAAAAAAGAACGTGAGTATGAGAGGAAAAGTGACGGAGAAAAATACATATTATCCTTATATTATATTGCAGTCCCTCAATATCAAAATAATCTGTTGTGAGTCTTGATTTGAGCTGTTCCCTATCTGTCTGTGCTTTTTCCCTAATGACCAATACTTTTAAGGCTGCTTGAACTATTGTCATATATAATATTCCCCATTCCAAGTGCTTTACTGTCTTGAAGTTTAAGCAAATATTATACTTTTTGTCTAGTTTTGAAGTGGTCCAATATATATTTTTCTAATATTTCTTCCTCCTACTTCTGGCATCGTGACAAGTGAGAACCAGAAAAAATGAAGTAACCAACGTTCAGTAATAATGAGATGTTTTTGGATGAGTGCAGGGTCATGTGGAAGATGTTAGACGCCAAGTCAATGAAGCAGTTCAATCACGCCATGTTAGTATCTCTTTCTTACTTGGGAAATAAACACTGACCATTGGATTTGACATTGCCTTGGATAATGCTTGCCGTGCCTTTTGTTCATTATGTTCTTGCCCGTTGCAACAAGAATCTAAAACTAAAAAGTATTAGAACTTAGAACTAATGAGAAATTGTTTTACCATATATGTAGCTTTTAACTGATGCTAAACCGAATCACTACTGTTCAAGTAGGTGGTGAGCCAGTAGATTCACCATAGGTATAAATGCCGAGTCATAATATTTACAGAATTATCTGGTCTGCCTTTTGAGAAGGATGTGACAATTGCAAATGTAGCTATCTTCATCATCTTTAGGAGGTTGAAAGTTGAAACTATGTAGATGAAAATATAATTCATGAAATTTGAAGGGATTATTTTATTTATATTTAAGCATATTAGAAAGGTCGAGTCCTCTCCAACAAAAGTTGATTGAGTTGCAGTCTTTGGCCAACCCAAAAATGGAGCTCAGGAAAATGAGTTCAAAATTTTAGTGTGGTCGCCTACTTAAGATATATTAAGATTTTACCCGTTGCTTTAAAACCAAATATCGTAGGTTTTGATGGTTGTCTCATGACATTCGTCAAAATGTACTTAAGCGGGTCTAGACATTCATAGATGTCAAGAAATGGAACAGTGCGAAACTTTTGTAACTAAAAGCTACTGCATTGCTGTGTTTGTGAGCTTCCTTTCACTGTGATCTTTGCACTTTGCAGTCAGATTTGGTGCAGTATTTGGTTTCATTATTCATTAATCATTTGATCATTTCAATTGTTCCCCGGATATATTGTTACAGAAAGTTGACATGATGTATGCTGCATTTACTGGCCAACCATTAGAGAAAGTACAACAATACACGGAGAGGGATCGGTTTTTATCTGTTTCTGAGGTAACAATGTGCAGTGTTTAGTGAATGGATTGAAGTTAATTTTTCTTTTTTTTTTCTTTTTTTTTTTGTATTCCATCTGTGTCAAAAATGAAAAAGGATAATAATGACGTAGGGAGTAAGTTAATTAAAAATAACTTTTTTCGGGATCACGCTGTATGATAAAATCTCTTCCTCGACATTGGAATATCCGATACATGACTCGAACTCCTGTGAACTACTGCAACAAAGATAAGAAACAGAATACTGAAACTTCAAAAAAAAAAATTGCCTTCTCTTGCAGGCTTTGGAGTTTGGGCTTATCGACGGTGTGCTCGAAACAGAATACTGAGCTTGGATTTGGCGAACTCTGATCATTCATCTGCACTATACAGTGCTTTGATTATGCAGAACTTAACTTCTGAATGCGGCTCATCCATGCTTTGATACAGAACAATCAAATTTTCAGGCACGTGCATCTTTTCACTGGTAAACTCTCAAATCCTCCCCGAATCAATGCACATGAGCTGGTATTTGAGAACACAATGATATTATTTGTGATATTATTTGCAGCCATGTCGATATTTAGTGTCATTCTTGTCAAAATTCCTGCTTCAAATTGTCTTCTTGGACTGTCACCTTGGCTAGGGCCTGAACATGATTAGAGTATACTGAAATCATGATTGAAAGCTACGGTCAGATTTAAGATTGTCTTTTTAAATAAGACTACTTTGAACTGCATGGTACCTTATTATCTACACTGTTTTTGTCTATAAAATATATTGTCATAAATAACTATTCGATTTTTTATTTTTGGTCTCTGAAAATTAAGCTTGTAAAGACTATTTCTACCTTAAAAAGTTGAC

mRNA sequence

TAGTCAGTGAAGCTCGAGAACGCAGCGCCATTCCCACAAGCTTTGCTCGCCATGGTAGTAGCTTCAGCTTTTACTGCATCTCTCTGTTTCTCTGTCTCTTCGCACAATAGAGCATCTTCCGTTCCTCAGCTTTCTCGCCGAAATTCACGCAGGTCGATAGTTTCTGCCATCCCGAGACCGTATGGAGACTCTTCAACAATTGGATTATCGAGCAAAACAGTTGGGGCACCTTTAAACCTCGACGAAGATTTTCTTCACACCAGTACAAGTTATGGACCTATAATGGCCAAGAAAGGCAATCCACCAATTATGCCTGCAGTGATGACACCAGGAGGGCCTTTGAATCTCTCTTCTGTGTTATTTAGGAATCGTATCATATTTATTGGTCAACCCATCAACTCCAACGTTGCACAGCGAGTTATATCACAGCTTGTGACACTAGCAACCATTGATGAGGAGTCGGATATCCTGGTATATCTGAATTGCCCTGGTGGAAGTACCTACTCAATATTAGCAATTTATGATTGCATGTCTTGGATAAAGCCTAAGGTTGGCACAGTGTGCTTCGGAGTTGCTGCAAGCCAAGGGGCTCTTCTCCTTGCAGGTGGAGAAAAGGGAATGCGCTATGCTATGCCAAATTCTCGAATTATGATACATCAGCCACAAAGTGGATGTGGGGGTCATGTGGAAGATGTTAGACGCCAAGTCAATGAAGCAGTTCAATCACGCCATAAAGTTGACATGATGTATGCTGCATTTACTGGCCAACCATTAGAGAAAGTACAACAATACACGGAGAGGGATCGGTTTTTATCTGTTTCTGAGGCTTTGGAGTTTGGGCTTATCGACGGTGTGCTCGAAACAGAATACTGAGCTTGGATTTGGCGAACTCTGATCATTCATCTGCACTATACAGTGCTTTGATTATGCAGAACTTAACTTCTGAATGCGGCTCATCCATGCTTTGATACAGAACAATCAAATTTTCAGGCACGTGCATCTTTTCACTGGTAAACTCTCAAATCCTCCCCGAATCAATGCACATGAGCTGGTATTTGAGAACACAATGATATTATTTGTGATATTATTTGCAGCCATGTCGATATTTAGTGTCATTCTTGTCAAAATTCCTGCTTCAAATTGTCTTCTTGGACTGTCACCTTGGCTAGGGCCTGAACATGATTAGAGTATACTGAAATCATGATTGAAAGCTACGGTCAGATTTAAGATTGTCTTTTTAAATAAGACTACTTTGAACTGCATGGTACCTTATTATCTACACTGTTTTTGTCTATAAAATATATTGTCATAAATAACTATTCGATTTTTTATTTTTGGTCTCTGAAAATTAAGCTTGTAAAGACTATTTCTACCTTAAAAAGTTGAC

Coding sequence (CDS)

ATGGTAGTAGCTTCAGCTTTTACTGCATCTCTCTGTTTCTCTGTCTCTTCGCACAATAGAGCATCTTCCGTTCCTCAGCTTTCTCGCCGAAATTCACGCAGGTCGATAGTTTCTGCCATCCCGAGACCGTATGGAGACTCTTCAACAATTGGATTATCGAGCAAAACAGTTGGGGCACCTTTAAACCTCGACGAAGATTTTCTTCACACCAGTACAAGTTATGGACCTATAATGGCCAAGAAAGGCAATCCACCAATTATGCCTGCAGTGATGACACCAGGAGGGCCTTTGAATCTCTCTTCTGTGTTATTTAGGAATCGTATCATATTTATTGGTCAACCCATCAACTCCAACGTTGCACAGCGAGTTATATCACAGCTTGTGACACTAGCAACCATTGATGAGGAGTCGGATATCCTGGTATATCTGAATTGCCCTGGTGGAAGTACCTACTCAATATTAGCAATTTATGATTGCATGTCTTGGATAAAGCCTAAGGTTGGCACAGTGTGCTTCGGAGTTGCTGCAAGCCAAGGGGCTCTTCTCCTTGCAGGTGGAGAAAAGGGAATGCGCTATGCTATGCCAAATTCTCGAATTATGATACATCAGCCACAAAGTGGATGTGGGGGTCATGTGGAAGATGTTAGACGCCAAGTCAATGAAGCAGTTCAATCACGCCATAAAGTTGACATGATGTATGCTGCATTTACTGGCCAACCATTAGAGAAAGTACAACAATACACGGAGAGGGATCGGTTTTTATCTGTTTCTGAGGCTTTGGAGTTTGGGCTTATCGACGGTGTGCTCGAAACAGAATACTGA

Protein sequence

MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

Homology

[Close]

BLAST of CmoCh02G004130 vs. ExPASy Swiss-Prot
Match: Q9SAA2 (ATP-dependent Clp protease proteolytic subunit 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPP6 PE=1 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.0e-108
Identity = 199/264 (75.38%), Postives = 228/264 (86.36%), Query Frame = 0


Query: 11  LCFSVSSHN-RASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLH 70
           L FS  + N + +S    ++RN  R IVSA+  PYGDS   GLSS   G+P+ +D    +
Sbjct: 12  LSFSSRTRNPKPTSFLSHNQRNPIRRIVSALQSPYGDSLKAGLSSNVSGSPIKID----N 71

Query: 71  TSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVT 130
            +  +G I AKKGNPP+MP+VMTPGGPL+LSSVLFRNRIIFIGQPIN+ VAQRVISQLVT
Sbjct: 72  KAPRFGVIEAKKGNPPVMPSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVT 131

Query: 131 LATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKG 190
           LA+ID++SDIL+YLNCPGGSTYS+LAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKG
Sbjct: 132 LASIDDKSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKG 191

Query: 191 MRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTE 250
           MRYAMPN+R+MIHQPQ+GCGGHVEDVRRQVNEA+++R K+D MYAAFTGQPLEKVQQYTE
Sbjct: 192 MRYAMPNTRVMIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTE 251

Query: 251 RDRFLSVSEALEFGLIDGVLETEY 274
           RDRFLS SEALEFGLIDG+LETEY
Sbjct: 252 RDRFLSASEALEFGLIDGLLETEY 271

[Close]

BLAST of CmoCh02G004130 vs. ExPASy Swiss-Prot
Match: Q59993 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.7e-42
Identity = 92/200 (46.00%), Postives = 127/200 (63.50%), Query Frame = 0


Query: 76  PIMAKKGN--PPIMPAVMTPGG----PLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVT 135
           P+    GN    ++P V+   G      ++ S L R RIIF+G P++  VA  +++QL+ 
Sbjct: 11  PLSTLGGNNIQSVVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPVDDQVADSIVAQLLF 70

Query: 136 LATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKG 195
           L   D E DI +Y+N PGGS Y+ LAIYD M  I+P V T+CFG+AAS GA LL+GG KG
Sbjct: 71  LDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGCKG 130

Query: 196 MRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTE 255
            R A+P+SRIMIHQP  G  G   ++  Q  E +  + +++ M    TGQP+EK+Q+ TE
Sbjct: 131 KRMALPSSRIMIHQPLGGAQGQAVEIEIQAREILYIKDRLNTMLVEHTGQPMEKLQEDTE 190

Query: 256 RDRFLSVSEALEFGLIDGVL 270
           RD F+S  EA E+GLID V+
Sbjct: 191 RDFFMSAEEAKEYGLIDQVI 210

[Close]

BLAST of CmoCh02G004130 vs. ExPASy Swiss-Prot
Match: P54415 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 6.3e-42
Identity = 87/189 (46.03%), Postives = 125/189 (66.14%), Query Frame = 0


Query: 86  IMPAVMTPGG----PLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILV 145
           ++P V+   G      ++ S L R RIIF+G+P+ S+VA R+++QL+ L   D E DI +
Sbjct: 1   MIPIVVEESGRGERAFDIYSRLLRERIIFLGEPVTSDVANRIVAQLLFLEAEDPEKDIYL 60

Query: 146 YLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMI 205
           Y+N PGGS Y  L I+D M+ I+P V TVC G+AAS GA LLA G KG R ++ +SRIMI
Sbjct: 61  YINSPGGSVYDGLGIFDTMNHIRPDVSTVCVGLAASMGAFLLAAGAKGKRTSLAHSRIMI 120

Query: 206 HQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALE 265
           HQP  G  G  +D+  Q NE +  +  ++ + A  TGQPL +++  T+RD F+S SEA+E
Sbjct: 121 HQPLGGAQGQAKDIEIQANEILYIKQNLNEVLAERTGQPLSRIEDDTDRDFFMSASEAVE 180

Query: 266 FGLIDGVLE 271
           +GLID V++
Sbjct: 181 YGLIDRVID 189

[Close]

BLAST of CmoCh02G004130 vs. ExPASy Swiss-Prot
Match: Q5N665 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 6.3e-42
Identity = 87/189 (46.03%), Postives = 125/189 (66.14%), Query Frame = 0


Query: 86  IMPAVMTPGG----PLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILV 145
           ++P V+   G      ++ S L R RIIF+G+P+ S+VA R+++QL+ L   D E DI +
Sbjct: 1   MIPIVVEESGRGERAFDIYSRLLRERIIFLGEPVTSDVANRIVAQLLFLEAEDPEKDIYL 60

Query: 146 YLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMI 205
           Y+N PGGS Y  L I+D M+ I+P V TVC G+AAS GA LLA G KG R ++ +SRIMI
Sbjct: 61  YINSPGGSVYDGLGIFDTMNHIRPDVSTVCVGLAASMGAFLLAAGAKGKRTSLAHSRIMI 120

Query: 206 HQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALE 265
           HQP  G  G  +D+  Q NE +  +  ++ + A  TGQPL +++  T+RD F+S SEA+E
Sbjct: 121 HQPLGGAQGQAKDIEIQANEILYIKQNLNEVLAERTGQPLSRIEDDTDRDFFMSASEAVE 180

Query: 266 FGLIDGVLE 271
           +GLID V++
Sbjct: 181 YGLIDRVID 189

[Close]

BLAST of CmoCh02G004130 vs. ExPASy Swiss-Prot
Match: Q317Y6 (ATP-dependent Clp protease proteolytic subunit 4 OS=Prochlorococcus marinus (strain MIT 9312) OX=74546 GN=clpP4 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 6.3e-42
Identity = 91/188 (48.40%), Postives = 121/188 (64.36%), Query Frame = 0


Query: 87  MPAVMTPGG----PLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVY 146
           +P V+   G      ++ S L R RIIF+G  IN  V+  +++QL+ L   D E DI +Y
Sbjct: 31  VPTVIEQSGRGERAFDIYSRLLRERIIFLGSGINDQVSDSLVAQLLFLEAEDPEKDIQIY 90

Query: 147 LNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIH 206
           +N PGGS  + +AIYD M  I P V T+CFGVAAS GA LL+GG KG R A+PNSRIMIH
Sbjct: 91  INSPGGSVTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIH 150

Query: 207 QPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEF 266
           QP  G  G   ++  Q  E +  +  ++ + A  TGQPLEK+ + TERD FLS SEA+E+
Sbjct: 151 QPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEAVEY 210

Query: 267 GLIDGVLE 271
           GLID V++
Sbjct: 211 GLIDKVIK 218

[Close]

BLAST of CmoCh02G004130 vs. ExPASy TrEMBL
Match: A0A6J1G8P9 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111451769 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 4.7e-149
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 1   MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAP 60
           MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAP
Sbjct: 1   MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAP 60

Query: 61  LNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNVA 120
           LNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNVA
Sbjct: 61  LNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNVA 120

Query: 121 QRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGA 180
           QRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGA
Sbjct: 121 QRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGA 180

Query: 181 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP 240
           LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP
Sbjct: 181 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP 240

Query: 241 LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 274
           LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Sbjct: 241 LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 273

[Close]

BLAST of CmoCh02G004130 vs. ExPASy TrEMBL
Match: A0A6J1KXP8 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111499710 PE=3 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 3.4e-147
Identity = 270/273 (98.90%), Postives = 270/273 (98.90%), Query Frame = 0


Query: 1   MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAP 60
           M VASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVG P
Sbjct: 1   MAVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGTP 60

Query: 61  LNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNVA 120
           LNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINS VA
Sbjct: 61  LNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSAVA 120

Query: 121 QRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGA 180
           QRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGA
Sbjct: 121 QRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGA 180

Query: 181 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP 240
           LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP
Sbjct: 181 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP 240

Query: 241 LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 274
           LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Sbjct: 241 LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 273

[Close]

BLAST of CmoCh02G004130 vs. ExPASy TrEMBL
Match: A0A1S3C7Y1 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103497498 PE=3 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 5.1e-135
Identity = 251/274 (91.61%), Postives = 262/274 (95.62%), Query Frame = 0


Query: 1   MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAP 60
           MVVAS FTASL FSV+S NR SS+PQLSRR S RSIVSA+PRPYGDSSTIGLSSKT GAP
Sbjct: 1   MVVASPFTASLTFSVASLNRTSSIPQLSRRYSHRSIVSALPRPYGDSSTIGLSSKTNGAP 60

Query: 61  LNLDE-DFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNV 120
           LNLD+ DFL TSTSYGPI A+KGNPPIMPAVMTPGGPL+LSSVLFRNRIIFIGQP+NS V
Sbjct: 61  LNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSTV 120

Query: 121 AQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQG 180
           AQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQG
Sbjct: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG 180

Query: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240
           ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ
Sbjct: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240

Query: 241 PLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 274
            +EKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Sbjct: 241 SIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 274

[Close]

BLAST of CmoCh02G004130 vs. ExPASy TrEMBL
Match: A0A6J1D5M0 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111017253 PE=3 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 6.2e-133
Identity = 244/273 (89.38%), Postives = 261/273 (95.60%), Query Frame = 0


Query: 2   VVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPL 61
           + ASAFTASL FSVSS+NR SS+P LSRRNS+RS+VS +PRPYGDSSTIGLSSK++ APL
Sbjct: 1   MAASAFTASLTFSVSSNNRTSSIPPLSRRNSQRSVVSTLPRPYGDSSTIGLSSKSIRAPL 60

Query: 62  NLDE-DFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNVA 121
           +LD+ DFLH STSY PI AKKGNPPIMPAVMTPGGPL+LSSVLFRNRIIFIGQP+NS VA
Sbjct: 61  SLDDKDFLHASTSYRPIEAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVA 120

Query: 122 QRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGA 181
           QRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGA
Sbjct: 121 QRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGA 180

Query: 182 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP 241
           LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVD M++AFTGQP
Sbjct: 181 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDKMFSAFTGQP 240

Query: 242 LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 274
           LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Sbjct: 241 LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 273

[Close]

BLAST of CmoCh02G004130 vs. ExPASy TrEMBL
Match: A0A0A0LLX4 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa_2G245460 PE=3 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.6e-128
Identity = 238/274 (86.86%), Postives = 257/274 (93.80%), Query Frame = 0


Query: 1   MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAP 60
           MVVAS FTASL FSV+S+NRASS+ QLSRRNS RSIVSA PRPYGDSSTIGLSSKT GAP
Sbjct: 1   MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAP 60

Query: 61  LNLDE-DFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNV 120
           LNLD+ DFL TSTSY PI+A++ NPP+MPAVMTPGGPL+LSSVLFRNRIIFIGQPINS V
Sbjct: 61  LNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTV 120

Query: 121 AQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQG 180
           AQRVISQLVTLATIDE++DILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFG+ ASQG
Sbjct: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQG 180

Query: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240
           ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGG VEDVRRQVNEAVQSR+K++ MYAAFTGQ
Sbjct: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQ 240

Query: 241 PLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 274
            +E +QQY +RDRFLSVSEAL+FGLIDGVLETEY
Sbjct: 241 SIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY 274

[Close]

BLAST of CmoCh02G004130 vs. NCBI nr
Match: XP_022948075.1 (ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita moschata])

HSP 1 Score: 537.0 bits (1382), Expect = 9.7e-149
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 1   MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAP 60
           MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAP
Sbjct: 1   MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAP 60

Query: 61  LNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNVA 120
           LNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNVA
Sbjct: 61  LNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNVA 120

Query: 121 QRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGA 180
           QRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGA
Sbjct: 121 QRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGA 180

Query: 181 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP 240
           LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP
Sbjct: 181 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP 240

Query: 241 LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 274
           LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Sbjct: 241 LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 273

[Close]

BLAST of CmoCh02G004130 vs. NCBI nr
Match: KAG6605088.1 (ATP-dependent Clp protease proteolytic subunit 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035095.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 534.6 bits (1376), Expect = 4.8e-148
Identity = 272/273 (99.63%), Postives = 272/273 (99.63%), Query Frame = 0


Query: 1   MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAP 60
           MVVASAFTASLCFSVSSHNRASSVPQLS RNSRRSIVSAIPRPYGDSSTIGLSSKTVGAP
Sbjct: 1   MVVASAFTASLCFSVSSHNRASSVPQLSSRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAP 60

Query: 61  LNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNVA 120
           LNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNVA
Sbjct: 61  LNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNVA 120

Query: 121 QRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGA 180
           QRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGA
Sbjct: 121 QRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGA 180

Query: 181 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP 240
           LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP
Sbjct: 181 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP 240

Query: 241 LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 274
           LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Sbjct: 241 LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 273

[Close]

BLAST of CmoCh02G004130 vs. NCBI nr
Match: XP_023007112.1 (ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita maxima])

HSP 1 Score: 530.8 bits (1366), Expect = 7.0e-147
Identity = 270/273 (98.90%), Postives = 270/273 (98.90%), Query Frame = 0


Query: 1   MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAP 60
           M VASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVG P
Sbjct: 1   MAVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGTP 60

Query: 61  LNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNVA 120
           LNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINS VA
Sbjct: 61  LNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSAVA 120

Query: 121 QRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGA 180
           QRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGA
Sbjct: 121 QRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGA 180

Query: 181 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP 240
           LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP
Sbjct: 181 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP 240

Query: 241 LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 274
           LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Sbjct: 241 LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 273

[Close]

BLAST of CmoCh02G004130 vs. NCBI nr
Match: XP_023534664.1 (ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 525.0 bits (1351), Expect = 3.8e-145
Identity = 268/273 (98.17%), Postives = 268/273 (98.17%), Query Frame = 0


Query: 1   MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAP 60
           M VASAFTASL FSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIG S KTVGAP
Sbjct: 1   MAVASAFTASLSFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGFSRKTVGAP 60

Query: 61  LNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNVA 120
           LNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINS VA
Sbjct: 61  LNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSAVA 120

Query: 121 QRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGA 180
           QRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGA
Sbjct: 121 QRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGA 180

Query: 181 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP 240
           LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP
Sbjct: 181 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP 240

Query: 241 LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 274
           LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Sbjct: 241 LEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 273

[Close]

BLAST of CmoCh02G004130 vs. NCBI nr
Match: XP_038902836.1 (ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 496.1 bits (1276), Expect = 1.9e-136
Identity = 250/274 (91.24%), Postives = 264/274 (96.35%), Query Frame = 0


Query: 1   MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAP 60
           M VASAFTASL FSVSSHNR SS+ QLSRRNS RSIVSA+PRPYGDSSTIGLSSKT+G P
Sbjct: 1   MAVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDSSTIGLSSKTMGEP 60

Query: 61  LNLDE-DFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNV 120
           L++D+ DFLHTSTSYGPI A+KGNPPIMPAVMTPGGPL+LSSVLFRNRIIFIGQP+NS V
Sbjct: 61  LHVDDKDFLHTSTSYGPIEARKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIV 120

Query: 121 AQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQG 180
           AQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQG
Sbjct: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG 180

Query: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240
           ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHK+D MYAAFTGQ
Sbjct: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQ 240

Query: 241 PLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 274
           P+EKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Sbjct: 241 PIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 274

[Close]

BLAST of CmoCh02G004130 vs. TAIR 10
Match: AT1G11750.1 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 394.4 bits (1012), Expect = 7.3e-110
Identity = 199/264 (75.38%), Postives = 228/264 (86.36%), Query Frame = 0


Query: 11  LCFSVSSHN-RASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLH 70
           L FS  + N + +S    ++RN  R IVSA+  PYGDS   GLSS   G+P+ +D    +
Sbjct: 12  LSFSSRTRNPKPTSFLSHNQRNPIRRIVSALQSPYGDSLKAGLSSNVSGSPIKID----N 71

Query: 71  TSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVT 130
            +  +G I AKKGNPP+MP+VMTPGGPL+LSSVLFRNRIIFIGQPIN+ VAQRVISQLVT
Sbjct: 72  KAPRFGVIEAKKGNPPVMPSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVT 131

Query: 131 LATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKG 190
           LA+ID++SDIL+YLNCPGGSTYS+LAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKG
Sbjct: 132 LASIDDKSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKG 191

Query: 191 MRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTE 250
           MRYAMPN+R+MIHQPQ+GCGGHVEDVRRQVNEA+++R K+D MYAAFTGQPLEKVQQYTE
Sbjct: 192 MRYAMPNTRVMIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTE 251

Query: 251 RDRFLSVSEALEFGLIDGVLETEY 274
           RDRFLS SEALEFGLIDG+LETEY
Sbjct: 252 RDRFLSASEALEFGLIDGLLETEY 271

[Close]

BLAST of CmoCh02G004130 vs. TAIR 10
Match: AT1G11750.2 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 393.3 bits (1009), Expect = 1.6e-109
Identity = 203/278 (73.02%), Postives = 231/278 (83.09%), Query Frame = 0


Query: 11  LCFSVSSHN-RASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDE---- 70
           L FS  + N + +S    ++RN  R IVSA+  PYGDS   GLSS   G+P+ +D     
Sbjct: 12  LSFSSRTRNPKPTSFLSHNQRNPIRRIVSALQSPYGDSLKAGLSSNVSGSPIKIDNKAPS 71

Query: 71  -------DFLHTSTSY---GPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPI 130
                  + L +ST Y   G I AKKGNPP+MP+VMTPGGPL+LSSVLFRNRIIFIGQPI
Sbjct: 72  SLPLPILNILKSSTVYFIFGVIEAKKGNPPVMPSVMTPGGPLDLSSVLFRNRIIFIGQPI 131

Query: 131 NSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVA 190
           N+ VAQRVISQLVTLA+ID++SDIL+YLNCPGGSTYS+LAIYDCMSWIKPKVGTV FGVA
Sbjct: 132 NAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVA 191

Query: 191 ASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAA 250
           ASQGALLLAGGEKGMRYAMPN+R+MIHQPQ+GCGGHVEDVRRQVNEA+++R K+D MYAA
Sbjct: 192 ASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAA 251

Query: 251 FTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 274
           FTGQPLEKVQQYTERDRFLS SEALEFGLIDG+LETEY
Sbjct: 252 FTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLETEY 289

[Close]

BLAST of CmoCh02G004130 vs. TAIR 10
Match: AT1G02560.1 (nuclear encoded CLP protease 5 )

HSP 1 Score: 162.9 bits (411), Expect = 3.6e-40
Identity = 89/208 (42.79%), Postives = 127/208 (61.06%), Query Frame = 0


Query: 62  NLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNVAQ 121
           ++ +D    S+ Y P  A+   PP M          ++ S LF+ RII  G  ++ ++A 
Sbjct: 82  SIRDDLQVPSSPYFPAYAQGQGPPPMVQERFQ----SIISQLFQYRIIRCGGAVDDDMAN 141

Query: 122 RVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGAL 181
            +++QL+ L  +D   DI++Y+N PGGS  + +AI+D M  I+P V TVC G+AAS GA 
Sbjct: 142 IIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAF 201

Query: 182 LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPL 241
           LL+ G KG RY++PNSRIMIHQP  G  G   D+  Q NE +  +  ++   A  TGQ L
Sbjct: 202 LLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSL 261

Query: 242 EKVQQYTERDRFLSVSEALEFGLIDGVL 270
           EK+ Q T+RD F+S  EA E+GLIDGV+
Sbjct: 262 EKINQDTDRDFFMSAKEAKEYGLIDGVI 285

[Close]

BLAST of CmoCh02G004130 vs. TAIR 10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3 )

HSP 1 Score: 154.8 bits (390), Expect = 9.7e-38
Identity = 75/174 (43.10%), Postives = 112/174 (64.37%), Query Frame = 0


Query: 97  LNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAI 156
           L+ +++L R RI+F+G  ++   A  VISQL+ L   D E DI +++N PGGS  + + I
Sbjct: 84  LDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGI 143

Query: 157 YDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVR 216
           YD M   K  V TVC G+AAS GA LLA G KG RY MPNS++MIHQP    GG   ++ 
Sbjct: 144 YDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMS 203

Query: 217 RQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE 271
            ++ E +  + K++ +++  TG+P  +++  T+RD FL+  EA E+GLID V++
Sbjct: 204 IRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVID 257

[Close]

BLAST of CmoCh02G004130 vs. TAIR 10
Match: AT5G45390.1 (CLP protease P4 )

HSP 1 Score: 149.4 bits (376), Expect = 4.1e-36
Identity = 72/177 (40.68%), Postives = 112/177 (63.28%), Query Frame = 0


Query: 94  GGPLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSI 153
           G   ++  +L R RI+F+G  I+  VA  ++SQL+ L   D + DI +++N PGGS  + 
Sbjct: 75  GAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSAT 134

Query: 154 LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVE 213
           +AIYD +  ++  V T+  G+AAS  +++L  G KG R+AMPN+RIMIHQP  G  G   
Sbjct: 135 MAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAI 194

Query: 214 DVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE 271
           DV  Q  E + +++ V  + A  T +  E+V +  +RDR++S  EA+E+GLIDGV++
Sbjct: 195 DVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGVID 251

The following BLAST results are available for this feature:

BLAST of CmoCh02G004130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAA2	1.0e-108	75.38	ATP-dependent Clp protease proteolytic subunit 6, chloroplastic OS=Arabidopsis t...	[more]
Q59993	1.7e-42	46.00	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechocystis sp. (strain PC...	[more]
P54415	6.3e-42	46.03	ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus elongatus (str...	[more]
Q5N665	6.3e-42	46.03	ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain AT...	[more]
Q317Y6	6.3e-42	48.40	ATP-dependent Clp protease proteolytic subunit 4 OS=Prochlorococcus marinus (str...	[more]

BLAST of CmoCh02G004130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G8P9	4.7e-149	100.00	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KXP8	3.4e-147	98.90	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A1S3C7Y1	5.1e-135	91.61	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1D5M0	6.2e-133	89.38	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A0A0LLX4	1.6e-128	86.86	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa...	[more]

BLAST of CmoCh02G004130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948075.1	9.7e-149	100.00	ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita mosch...	[more]
KAG6605088.1	4.8e-148	99.63	ATP-dependent Clp protease proteolytic subunit 6, chloroplastic, partial [Cucurb...	[more]
XP_023007112.1	7.0e-147	98.90	ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita maxim...	[more]
XP_023534664.1	3.8e-145	98.17	ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita pepo ...	[more]
XP_038902836.1	1.9e-136	91.24	ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Beni...	[more]

BLAST of CmoCh02G004130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11750.1	7.3e-110	75.38	CLP protease proteolytic subunit 6	[more]
AT1G11750.2	1.6e-109	73.02	CLP protease proteolytic subunit 6	[more]
AT1G02560.1	3.6e-40	42.79	nuclear encoded CLP protease 5	[more]
AT1G66670.1	9.7e-38	43.10	CLP protease proteolytic subunit 3	[more]
AT5G45390.1	4.1e-36	40.68	CLP protease P4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 98..113 score: 42.03 coord: 169..186 score: 62.5 coord: 247..266 score: 53.75 coord: 138..158 score: 51.79 coord: 190..209 score: 55.75
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 86..272 score: 32.920959
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 98..268 e-value: 1.36576E-85 score: 251.207
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 99..271 e-value: 1.3E-65 score: 220.7
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 12..273
None	No IPR available	GENE3D	3.90.226.10		coord: 85..273 e-value: 8.5E-61 score: 207.1
None	No IPR available	PANTHER	PTHR10381:SF8	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 6, CHLOROPLASTIC	coord: 12..273
IPR033135	ClpP, histidine active site	PROSITE	PS00382	CLP_PROTEASE_HIS	coord: 191..204
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 97..271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G004130.1	CmoCh02G004130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009368	endopeptidase Clp complex
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0051117	ATPase binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity