CmoCh02G003850 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh02G003850
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionprotein CASPARIAN STRIP INTEGRITY FACTOR 2-like isoform X2
LocationCmo_Chr02: 1973931 .. 1976037 (-)
RNA-Seq ExpressionCmoCh02G003850
SyntenyCmoCh02G003850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATAAATCATACCTAAGCGAGCTTCATTCGGGTCTATGCTCGAGAAACAAGAGAAGAAGAAGAAGAAAAACACGATCGTAAGGTTGTTTCTATCGTATCGGAGTCATGCTTCTCAAGTATAAGCTCAACTTCATCCTCGTCCTCCTCCTCGTTTCGGCCTCGTTTTTATCCACCATTTGCTCAGCAGGTCTAACTTATCTATCTAAGCTTCTAGATTCATTACGGGATTTAGTAGTTTAATCTAATCGTTCTTTAAAACTATGTTACAATCACGTTCTTTGTCTATATATGTCTTTTAAAACATAAGAGATTCAAACTTCTGATATCTTAGTCAAGAATACATGTCTTAACTAGTTGAGTCATGATCGTGTAACTAGACACGTTGTCTATGTCACTTGTACTTCTCGCTCTGTGTTGTCTTTTAAGTCGTTAGTGATAGAATTACTTAACTATTACTCAACTATGAAGACGTATCTTTTGACAAGGATGTTTTTGAAAGCTAATTTGTCAAATGAAAAGTGTTCTAAAGAAGTAGCATTAGAACACTTTTAAAAAAAACACTAATCATTCGAACATGTTTTTTTTTTCCGACAACTAAAGATAACCTTATTAATGAAAAAAAAACACAACTAAAGAGAATCTTATTTGCATGCGTAACATGTTAATGGTGCAAATTAAGGGTTCTGTGTTTTTTTTTTCATTGGTAACTGAGCTGTTCGTCAATGCTTACTTGAAAAGTGCTTTTTGGGTTAGCTGGCTGCTTTTCTGATGTGCTGTCTTTGTGGTTGAAGGTCGAGCTGATAAGCCGGTTCATCAGGGCAGTAACGGTAGAGTCGTGCATGAGGTTTGTATTTTTGTTCGACCGTAGCTAACGTAAATATAACTCAACTAATTAGATACGTTAATAAAATTGTTTCGATGGTTCATAATCTCAATCTCAATGTGCTCGTATTTCATTGAAAATTTACACGATAATCTTTATTATTCTCGTTAACTTTTTCATTATGAGTTATCAAAATGGGTCGGTGGGTCGGTTTCCTCGCTAGGTCTTTACAACCCTTTCGTTACGAGTAATCAAATTGGGTCGGTAATGAATTTTATCTCTCTTATAAAAATATTTGAATTCCCAGCTATATTTGAAAATGTAACAATTCAAGTTCACTACCAGTAGATATTGTTCTTTTTAGATTTTAAGGTTTTAAAAAACATGTCTACTATGAAGAGGTTTCCATACTATTATAAGAAATGCTCTGTTCCCCTCTCCAACTGACGTGGGATCCCACAATCCACCTCCTTAGAGGTCCAGCGTCCTCACACCGTCGTTGTCTGGCTCTGATACCTATTTGTAACAGTCCAAGTTCACTGCTAGTAGATATTGTCTTTTTTGGGCCAGTAGATATTGTCTTTTTTGGGCCAGATTGCCCCTCATGGTTTTAAAACACGTCGAAGTTTCCACACCCTTATAAGAAATGCTATGTTCCCCTCTCCAACCGATGTGGGATCTCACAATCCACCTCCTTAGGGGTCCAGTGTCCTCGTTGGCACACCGTTGTTGTCTGGCTCTAATACCCATTTGTACCGGTCCAAGTTCACGGATAGTAAATATTGTCATCTTTGGGCTTTTCCTTCCAGGCTTCCCCTCATGGTTTTAAAACGCATCGAGGTTAAGAAACTACTTATCTTTAGTCTTCAAAACTTAGCTCGGGTTTTGAAAACACCCAACTCATGGGTAGAAGCAATGAACCCGAGAATTAAACCCTAAAACGAGCATACGAGCATTTTTAATAAGTGATTTTGAATAAAGTTTTGAACTTTATTATAATTATATTAGGATGGGAAGAAGAAGATGGAGGAAATCATCCATGAAAGGGTTTTGAGGGTAAACACCAGGGACTATGGAAGGTATGATCCAGCTCCAGCTTTTGTGAAGCCTCCTTTCAAGCTCATCCCCAACTGATATCAAAAACCTTAGCTTATAAATAAATAATCACAAATATATCATGTGTTTCATAGTATAAGTATATATATATAAGTATAATGTATTATCATATTATATAATATAGTGTATAATCGTCACATATATATCAATATAAAGCTTTGTAACGTC

mRNA sequence

CATAAATCATACCTAAGCGAGCTTCATTCGGGTCTATGCTCGAGAAACAAGAGAAGAAGAAGAAGAAAAACACGATCGTAAGGTTGTTTCTATCGTATCGGAGTCATGCTTCTCAAGTATAAGCTCAACTTCATCCTCGTCCTCCTCCTCGTTTCGGCCTCGTTTTTATCCACCATTTGCTCAGCAGGTCGAGCTGATAAGCCGGTTCATCAGGGCAGTAACGGTAGAGTCGTGCATGAGGATGGGAAGAAGAAGATGGAGGAAATCATCCATGAAAGGGTTTTGAGGGTAAACACCAGGGACTATGGAAGGTATGATCCAGCTCCAGCTTTTGTGAAGCCTCCTTTCAAGCTCATCCCCAACTGATATCAAAAACCTTAGCTTATAAATAAATAATCACAAATATATCATGTGTTTCATAGTATAAGTATATATATATAAGTATAATGTATTATCATATTATATAATATAGTGTATAATCGTCACATATATATCAATATAAAGCTTTGTAACGTC

Coding sequence (CDS)

ATGCTTCTCAAGTATAAGCTCAACTTCATCCTCGTCCTCCTCCTCGTTTCGGCCTCGTTTTTATCCACCATTTGCTCAGCAGGTCGAGCTGATAAGCCGGTTCATCAGGGCAGTAACGGTAGAGTCGTGCATGAGGATGGGAAGAAGAAGATGGAGGAAATCATCCATGAAAGGGTTTTGAGGGTAAACACCAGGGACTATGGAAGGTATGATCCAGCTCCAGCTTTTGTGAAGCCTCCTTTCAAGCTCATCCCCAACTGA

Protein sequence

MLLKYKLNFILVLLLVSASFLSTICSAGRADKPVHQGSNGRVVHEDGKKKMEEIIHERVLRVNTRDYGRYDPAPAFVKPPFKLIPN
Homology
[Close]
BLAST of CmoCh02G003850 vs. ExPASy Swiss-Prot
Match: O65684 (Protein CASPARIAN STRIP INTEGRITY FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=CIF2 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.9e-09
Identity = 35/81 (43.21%), Postives = 53/81 (65.43%), Query Frame = 0 

Query: 6  KLNFILVLLLVSASFLSTICSAGRADKPVHQGSNGRVVHEDGKKKMEEIIHERVLRVNTR 65
          KL FI+ LL+ +++F   +CSAGR+   ++   +     E  ++++ E  HER+LR+N+R
Sbjct: 9  KLGFIIFLLVSASAF--ALCSAGRSSILIYSQEDDH--PEVVERRIHE--HERILRMNSR 68

Query: 66 DYGRYDPAPAFVKPPFKLIPN 87
          DYG   P P  V+PPFKLIPN
Sbjct: 69 DYGHSSPKPKLVRPPFKLIPN 83

[Close]
BLAST of CmoCh02G003850 vs. ExPASy Swiss-Prot
Match: Q84MD2 (Protein CASPARIAN STRIP INTEGRITY FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=CIF1 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.9e-08
Identity = 40/81 (49.38%), Postives = 51/81 (62.96%), Query Frame = 0 

Query: 6  KLNFILVLLLVSASFLSTICSAGRADKPVHQGSNGRVVHEDGKKKMEEIIHERVLRVNTR 65
          KL FI   ++VSAS LS +  AGR    VH+  N R   E  ++ M E  HER+LR+NT+
Sbjct: 10 KLGFI--FMIVSASALS-VSFAGRPSIFVHKKINLR--EEMVERSMHE--HERLLRMNTK 69

Query: 66 DYGRYDPAPAFVKPPFKLIPN 87
          DYG   P+P   +PPFKLIPN
Sbjct: 70 DYGNNSPSPRLERPPFKLIPN 83

[Close]
BLAST of CmoCh02G003850 vs. ExPASy TrEMBL
Match: A0A6J1KZ35 (protein CASPARIAN STRIP INTEGRITY FACTOR 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499558 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 9.6e-40
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MLLKYKLNFILVLLLVSASFLSTICSAGRADKPVHQGSNGRVVHEDGKKKMEEIIHERVL 60
          MLLKYKLNFILVLLLVSASFLSTICSAGRADKPVHQGSNGRVVHEDGKKKMEEIIHERVL
Sbjct: 1  MLLKYKLNFILVLLLVSASFLSTICSAGRADKPVHQGSNGRVVHEDGKKKMEEIIHERVL 60

Query: 61 RVNTRDYGRYDPAPAFVKPPFKLIPN 87
          RVNTRDYGRYDPAPAFVKPPFKLIPN
Sbjct: 61 RVNTRDYGRYDPAPAFVKPPFKLIPN 86

[Close]
BLAST of CmoCh02G003850 vs. ExPASy TrEMBL
Match: A0A6J1G5T3 (protein CASPARIAN STRIP INTEGRITY FACTOR 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451101 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 9.6e-40
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MLLKYKLNFILVLLLVSASFLSTICSAGRADKPVHQGSNGRVVHEDGKKKMEEIIHERVL 60
          MLLKYKLNFILVLLLVSASFLSTICSAGRADKPVHQGSNGRVVHEDGKKKMEEIIHERVL
Sbjct: 1  MLLKYKLNFILVLLLVSASFLSTICSAGRADKPVHQGSNGRVVHEDGKKKMEEIIHERVL 60

Query: 61 RVNTRDYGRYDPAPAFVKPPFKLIPN 87
          RVNTRDYGRYDPAPAFVKPPFKLIPN
Sbjct: 61 RVNTRDYGRYDPAPAFVKPPFKLIPN 86

[Close]
BLAST of CmoCh02G003850 vs. ExPASy TrEMBL
Match: A0A6J1L1I2 (protein CASPARIAN STRIP INTEGRITY FACTOR 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499558 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.1e-38
Identity = 86/88 (97.73%), Postives = 86/88 (97.73%), Query Frame = 0 

Query: 1  MLLKYKLNFILVLLLVSASFLSTICSA--GRADKPVHQGSNGRVVHEDGKKKMEEIIHER 60
          MLLKYKLNFILVLLLVSASFLSTICSA  GRADKPVHQGSNGRVVHEDGKKKMEEIIHER
Sbjct: 1  MLLKYKLNFILVLLLVSASFLSTICSAVEGRADKPVHQGSNGRVVHEDGKKKMEEIIHER 60

Query: 61 VLRVNTRDYGRYDPAPAFVKPPFKLIPN 87
          VLRVNTRDYGRYDPAPAFVKPPFKLIPN
Sbjct: 61 VLRVNTRDYGRYDPAPAFVKPPFKLIPN 88

[Close]
BLAST of CmoCh02G003850 vs. ExPASy TrEMBL
Match: A0A6J1G5M3 (protein CASPARIAN STRIP INTEGRITY FACTOR 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451101 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.1e-38
Identity = 86/88 (97.73%), Postives = 86/88 (97.73%), Query Frame = 0 

Query: 1  MLLKYKLNFILVLLLVSASFLSTICSA--GRADKPVHQGSNGRVVHEDGKKKMEEIIHER 60
          MLLKYKLNFILVLLLVSASFLSTICSA  GRADKPVHQGSNGRVVHEDGKKKMEEIIHER
Sbjct: 1  MLLKYKLNFILVLLLVSASFLSTICSAVEGRADKPVHQGSNGRVVHEDGKKKMEEIIHER 60

Query: 61 VLRVNTRDYGRYDPAPAFVKPPFKLIPN 87
          VLRVNTRDYGRYDPAPAFVKPPFKLIPN
Sbjct: 61 VLRVNTRDYGRYDPAPAFVKPPFKLIPN 88

[Close]
BLAST of CmoCh02G003850 vs. ExPASy TrEMBL
Match: A0A0A0LJ22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249780 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 9.7e-24
Identity = 66/91 (72.53%), Postives = 74/91 (81.32%), Query Frame = 0 

Query: 1  MLLKYKLNFILVLLLVSASFLSTICSAGRADKPVHQ-GSNGRVVHEDGKKK----MEEII 60
          M LKYKL+FI +LLL S SFLSTIC AGR  K V +  + G VVHEDGK+K    MEEII
Sbjct: 1  MFLKYKLSFIFILLL-STSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEII 60

Query: 61 HERVLRVNTRDYGRYDPAPAFVKPPFKLIPN 87
          HER+LRVNT+DYGRYDP+PAFVKPPFKLIPN
Sbjct: 61 HERLLRVNTKDYGRYDPSPAFVKPPFKLIPN 90

[Close]
BLAST of CmoCh02G003850 vs. NCBI nr
Match: XP_022947143.1 (protein CASPARIAN STRIP INTEGRITY FACTOR 2-like isoform X2 [Cucurbita moschata] >XP_023006911.1 protein CASPARIAN STRIP INTEGRITY FACTOR 2-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 172.2 bits (435), Expect = 2.0e-39
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MLLKYKLNFILVLLLVSASFLSTICSAGRADKPVHQGSNGRVVHEDGKKKMEEIIHERVL 60
          MLLKYKLNFILVLLLVSASFLSTICSAGRADKPVHQGSNGRVVHEDGKKKMEEIIHERVL
Sbjct: 1  MLLKYKLNFILVLLLVSASFLSTICSAGRADKPVHQGSNGRVVHEDGKKKMEEIIHERVL 60

Query: 61 RVNTRDYGRYDPAPAFVKPPFKLIPN 87
          RVNTRDYGRYDPAPAFVKPPFKLIPN
Sbjct: 61 RVNTRDYGRYDPAPAFVKPPFKLIPN 86

[Close]
BLAST of CmoCh02G003850 vs. NCBI nr
Match: KAG6605061.1 (Protein CASPARIAN STRIP INTEGRITY FACTOR 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 170.6 bits (431), Expect = 5.8e-39
Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0 

Query: 1  MLLKYKLNFILVLLLVSASFLSTICSAGRADKPVHQGSNGRVVHEDGKKKMEEIIHERVL 60
          MLLKYKLNFILVLLLVSASFLSTICSAGRADKPVHQGSNGR VHEDGKKKMEEIIHERVL
Sbjct: 1  MLLKYKLNFILVLLLVSASFLSTICSAGRADKPVHQGSNGRAVHEDGKKKMEEIIHERVL 60

Query: 61 RVNTRDYGRYDPAPAFVKPPFKLIPN 87
          RVNTRDYGRYDPAPAFVKPPFKLIPN
Sbjct: 61 RVNTRDYGRYDPAPAFVKPPFKLIPN 86

[Close]
BLAST of CmoCh02G003850 vs. NCBI nr
Match: XP_022947142.1 (protein CASPARIAN STRIP INTEGRITY FACTOR 2-like isoform X1 [Cucurbita moschata] >XP_023006910.1 protein CASPARIAN STRIP INTEGRITY FACTOR 2-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 167.2 bits (422), Expect = 6.4e-38
Identity = 86/88 (97.73%), Postives = 86/88 (97.73%), Query Frame = 0 

Query: 1  MLLKYKLNFILVLLLVSASFLSTICSA--GRADKPVHQGSNGRVVHEDGKKKMEEIIHER 60
          MLLKYKLNFILVLLLVSASFLSTICSA  GRADKPVHQGSNGRVVHEDGKKKMEEIIHER
Sbjct: 1  MLLKYKLNFILVLLLVSASFLSTICSAVEGRADKPVHQGSNGRVVHEDGKKKMEEIIHER 60

Query: 61 VLRVNTRDYGRYDPAPAFVKPPFKLIPN 87
          VLRVNTRDYGRYDPAPAFVKPPFKLIPN
Sbjct: 61 VLRVNTRDYGRYDPAPAFVKPPFKLIPN 88

[Close]
BLAST of CmoCh02G003850 vs. NCBI nr
Match: XP_023533488.1 (protein CASPARIAN STRIP INTEGRITY FACTOR 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 160.2 bits (404), Expect = 7.8e-36
Identity = 82/86 (95.35%), Postives = 83/86 (96.51%), Query Frame = 0 

Query: 1  MLLKYKLNFILVLLLVSASFLSTICSAGRADKPVHQGSNGRVVHEDGKKKMEEIIHERVL 60
          MLLKYKLNFILV LLVSASFLSTICSAGRAD+PVHQG  GRVVHEDGKKKMEEIIHERVL
Sbjct: 1  MLLKYKLNFILV-LLVSASFLSTICSAGRADQPVHQGGYGRVVHEDGKKKMEEIIHERVL 60

Query: 61 RVNTRDYGRYDPAPAFVKPPFKLIPN 87
          RVNTRDYGRYDPAPAFVKPPFKLIPN
Sbjct: 61 RVNTRDYGRYDPAPAFVKPPFKLIPN 85

[Close]
BLAST of CmoCh02G003850 vs. NCBI nr
Match: XP_011649242.1 (protein CASPARIAN STRIP INTEGRITY FACTOR 2 [Cucumis sativus] >KGN61823.1 hypothetical protein Csa_006235 [Cucumis sativus])

HSP 1 Score: 119.0 bits (297), Expect = 2.0e-23
Identity = 66/91 (72.53%), Postives = 74/91 (81.32%), Query Frame = 0 

Query: 1  MLLKYKLNFILVLLLVSASFLSTICSAGRADKPVHQ-GSNGRVVHEDGKKK----MEEII 60
          M LKYKL+FI +LLL S SFLSTIC AGR  K V +  + G VVHEDGK+K    MEEII
Sbjct: 1  MFLKYKLSFIFILLL-STSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEII 60

Query: 61 HERVLRVNTRDYGRYDPAPAFVKPPFKLIPN 87
          HER+LRVNT+DYGRYDP+PAFVKPPFKLIPN
Sbjct: 61 HERLLRVNTKDYGRYDPSPAFVKPPFKLIPN 90

[Close]
BLAST of CmoCh02G003850 vs. TAIR 10
Match: AT4G34600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube growth; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16385.1); Has 17 Blast hits to 17 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 2.1e-10
Identity = 35/81 (43.21%), Postives = 53/81 (65.43%), Query Frame = 0 

Query: 6  KLNFILVLLLVSASFLSTICSAGRADKPVHQGSNGRVVHEDGKKKMEEIIHERVLRVNTR 65
          KL FI+ LL+ +++F   +CSAGR+   ++   +     E  ++++ E  HER+LR+N+R
Sbjct: 9  KLGFIIFLLVSASAF--ALCSAGRSSILIYSQEDDH--PEVVERRIHE--HERILRMNSR 68

Query: 66 DYGRYDPAPAFVKPPFKLIPN 87
          DYG   P P  V+PPFKLIPN
Sbjct: 69 DYGHSSPKPKLVRPPFKLIPN 83

[Close]
BLAST of CmoCh02G003850 vs. TAIR 10
Match: AT2G16385.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 1.3e-09
Identity = 40/81 (49.38%), Postives = 51/81 (62.96%), Query Frame = 0 

Query: 6  KLNFILVLLLVSASFLSTICSAGRADKPVHQGSNGRVVHEDGKKKMEEIIHERVLRVNTR 65
          KL FI   ++VSAS LS +  AGR    VH+  N R   E  ++ M E  HER+LR+NT+
Sbjct: 10 KLGFI--FMIVSASALS-VSFAGRPSIFVHKKINLR--EEMVERSMHE--HERLLRMNTK 69

Query: 66 DYGRYDPAPAFVKPPFKLIPN 87
          DYG   P+P   +PPFKLIPN
Sbjct: 70 DYGNNSPSPRLERPPFKLIPN 83

The following BLAST results are available for this feature:
BLAST of CmoCh02G003850 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O656842.9e-0943.21Protein CASPARIAN STRIP INTEGRITY FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=CI... [more]
Q84MD21.9e-0849.38Protein CASPARIAN STRIP INTEGRITY FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=CI... [more]
BLAST of CmoCh02G003850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KZ359.6e-40100.00protein CASPARIAN STRIP INTEGRITY FACTOR 2-like isoform X2 OS=Cucurbita maxima O... [more]
A0A6J1G5T39.6e-40100.00protein CASPARIAN STRIP INTEGRITY FACTOR 2-like isoform X2 OS=Cucurbita moschata... [more]
A0A6J1L1I23.1e-3897.73protein CASPARIAN STRIP INTEGRITY FACTOR 2-like isoform X1 OS=Cucurbita maxima O... [more]
A0A6J1G5M33.1e-3897.73protein CASPARIAN STRIP INTEGRITY FACTOR 2-like isoform X1 OS=Cucurbita moschata... [more]
A0A0A0LJ229.7e-2472.53Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249780 PE=4 SV=1[more]
BLAST of CmoCh02G003850 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022947143.12.0e-39100.00protein CASPARIAN STRIP INTEGRITY FACTOR 2-like isoform X2 [Cucurbita moschata] ... [more]
KAG6605061.15.8e-3998.84Protein CASPARIAN STRIP INTEGRITY FACTOR 2, partial [Cucurbita argyrosperma subs... [more]
XP_022947142.16.4e-3897.73protein CASPARIAN STRIP INTEGRITY FACTOR 2-like isoform X1 [Cucurbita moschata] ... [more]
XP_023533488.17.8e-3695.35protein CASPARIAN STRIP INTEGRITY FACTOR 2-like [Cucurbita pepo subsp. pepo][more]
XP_011649242.12.0e-2372.53protein CASPARIAN STRIP INTEGRITY FACTOR 2 [Cucumis sativus] >KGN61823.1 hypothe... [more]
BLAST of CmoCh02G003850 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G34600.12.1e-1043.21unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen t... [more]
AT2G16385.11.3e-0949.38unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038974Protein Casparian strip integrity factor 1/2PANTHERPTHR35290PROTEIN CASPARIAN STRIP INTEGRITY FACTOR 1-RELATEDcoord: 5..86
NoneNo IPR availablePANTHERPTHR35290:SF2PROTEIN CASPARIAN STRIP INTEGRITY FACTOR 1-RELATEDcoord: 5..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G003850.1CmoCh02G003850.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055072 iron ion homeostasis
biological_process GO:2000067 regulation of root morphogenesis
biological_process GO:0010447 response to acidic pH
biological_process GO:0010039 response to iron ion
cellular_component GO:0048226 Casparian strip
cellular_component GO:0016020 membrane