CmoCh02G003580 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh02G003580
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR71-like
LocationCmo_Chr02: 1804316 .. 1804774 (-)
RNA-Seq ExpressionCmoCh02G003580
SyntenyCmoCh02G003580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACAGGAGACGGCGAAAAGCAACAATATCCGGCGCATTGTTCGGCTCCGTCAAATGCTACAACACTGGCGCCAGACGGCACGAGTGGCATCCTCCAGAGCACCGCCGTCCGGCGTCCCTGCCGGTCACATCGCCGTCTGTGTCGGCAGCGAATATCGGCGATTCATCGTCCGCGCTACCTTCTTGAACCATCCGATCTTCCAGAAGCTTCTCACGGAAGCTGAAGAAGAATACGGCTTCACTACGCAAGGTGCTCTGGCGCTTCCGTGCGACGAATCGGTATTCGAAGAGGTTCTCCGAGTCGTCGCTCGTTCCGAGTTGCGTAACTCATCGCGAAATCCGAATCTCACAGATTGGCAGAGGCGATGCGATGAAGATATCAGAAAGAACTCCGAGTTTTTAGGCGAATCAAGACCTTTACTGTATGGATTTGCCGATAGTAAATCCGTTTGTTGA

mRNA sequence

ATGTCACAGGAGACGGCGAAAAGCAACAATATCCGGCGCATTGTTCGGCTCCGTCAAATGCTACAACACTGGCGCCAGACGGCACGAGTGGCATCCTCCAGAGCACCGCCGTCCGGCGTCCCTGCCGGTCACATCGCCGTCTGTGTCGGCAGCGAATATCGGCGATTCATCGTCCGCGCTACCTTCTTGAACCATCCGATCTTCCAGAAGCTTCTCACGGAAGCTGAAGAAGAATACGGCTTCACTACGCAAGGTGCTCTGGCGCTTCCGTGCGACGAATCGGTATTCGAAGAGGTTCTCCGAGTCGTCGCTCGTTCCGAGTTGCGTAACTCATCGCGAAATCCGAATCTCACAGATTGGCAGAGGCGATGCGATGAAGATATCAGAAAGAACTCCGAGTTTTTAGGCGAATCAAGACCTTTACTGTATGGATTTGCCGATAGTAAATCCGTTTGTTGA

Coding sequence (CDS)

ATGTCACAGGAGACGGCGAAAAGCAACAATATCCGGCGCATTGTTCGGCTCCGTCAAATGCTACAACACTGGCGCCAGACGGCACGAGTGGCATCCTCCAGAGCACCGCCGTCCGGCGTCCCTGCCGGTCACATCGCCGTCTGTGTCGGCAGCGAATATCGGCGATTCATCGTCCGCGCTACCTTCTTGAACCATCCGATCTTCCAGAAGCTTCTCACGGAAGCTGAAGAAGAATACGGCTTCACTACGCAAGGTGCTCTGGCGCTTCCGTGCGACGAATCGGTATTCGAAGAGGTTCTCCGAGTCGTCGCTCGTTCCGAGTTGCGTAACTCATCGCGAAATCCGAATCTCACAGATTGGCAGAGGCGATGCGATGAAGATATCAGAAAGAACTCCGAGTTTTTAGGCGAATCAAGACCTTTACTGTATGGATTTGCCGATAGTAAATCCGTTTGTTGA

Protein sequence

MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSGVPAGHIAVCVGSEYRRFIVRATFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDWQRRCDEDIRKNSEFLGESRPLLYGFADSKSVC
Homology
BLAST of CmoCh02G003580 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.8e-12
Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 0

Query: 38  SGVPAGHIAVCVGSEYRRFIVRATFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFE 97
           S VP+GH+ V VG +  RF+V A  LNHP+F  LL  + +EYG+T +G L +PC+  VFE
Sbjct: 46  SSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFE 105

Query: 98  EVL 101
           +V+
Sbjct: 106 QVV 108

BLAST of CmoCh02G003580 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.5e-12
Identity = 38/94 (40.43%), Postives = 50/94 (53.19%), Query Frame = 0

Query: 40  VPAGHIAVCVGSEYRRFIVRATFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEV 99
           VPAGH+ V VG E  RF+V A  +NHPIF  LL  + +EYG+  +G L +PC   VFE V
Sbjct: 54  VPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERV 113

Query: 100 LRVVARSELRNSSRNPNLTDWQRRCDEDIRKNSE 134
           +  +       S    NL       DE I + +E
Sbjct: 114 VETLRLGGFEGSGDLENLVASLLSGDELIPETTE 147

BLAST of CmoCh02G003580 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 8.5e-12
Identity = 38/94 (40.43%), Postives = 51/94 (54.26%), Query Frame = 0

Query: 11  IRRIVRLRQMLQHWRQTARVASSRAP----PSGVPAGHIAVCVGSEYRRFIVRATFLNHP 70
           IRR+ R+    Q+    +     R       S VP GH+ V VG E  RF+V A  LNHP
Sbjct: 5   IRRLSRVADSTQYSLLRSESQRGRTKKEKHKSWVPEGHVPVYVGHEMERFVVNAELLNHP 64

Query: 71  IFQKLLTEAEEEYGFTTQGALALPCDESVFEEVL 101
           +F  LL ++ +EYG+  QG L +PC   VFE +L
Sbjct: 65  VFVALLKQSAQEYGYEQQGVLRIPCHVLVFERIL 98

BLAST of CmoCh02G003580 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 31/68 (45.59%), Postives = 42/68 (61.76%), Query Frame = 0

Query: 33  SRAPPSGVPAGHIAVCVGSEYRRFIVRATFLNHPIFQKLLTEAEEEYGFTTQGALALPCD 92
           S+   S VP GH+ V VG E  RF+V A  LNHP+F  LL  + +EYG+  +G L +PC 
Sbjct: 43  SKKQTSSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCH 102

Query: 93  ESVFEEVL 101
             VFE ++
Sbjct: 103 VLVFERIM 110

BLAST of CmoCh02G003580 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.5e-11
Identity = 32/67 (47.76%), Postives = 40/67 (59.70%), Query Frame = 0

Query: 37  PSGVPAGHIAVCVGSEYRRFIVRATFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVF 96
           P  VP GH  V VG    R+IV  +FL HP FQ LL  AEEE+GF     L +PCDE VF
Sbjct: 40  PLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVF 99

Query: 97  EEVLRVV 104
           + +  ++
Sbjct: 100 QTLTSMI 106

BLAST of CmoCh02G003580 vs. ExPASy TrEMBL
Match: A0A6J1G6T1 (auxin-responsive protein SAUR71-like OS=Cucurbita moschata OX=3662 GN=LOC111451389 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.6e-80
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0

Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSGVPAGHIAVCVGSEYRRFIVRA 60
           MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSGVPAGHIAVCVGSEYRRFIVRA
Sbjct: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSGVPAGHIAVCVGSEYRRFIVRA 60

Query: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120
           TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW
Sbjct: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120

Query: 121 QRRCDEDIRKNSEFLGESRPLLYGFADSKSVC 153
           QRRCDEDIRKNSEFLGESRPLLYGFADSKSVC
Sbjct: 121 QRRCDEDIRKNSEFLGESRPLLYGFADSKSVC 152

BLAST of CmoCh02G003580 vs. ExPASy TrEMBL
Match: A0A6J1L3P0 (auxin-responsive protein SAUR71-like OS=Cucurbita maxima OX=3661 GN=LOC111499611 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.6e-74
Identity = 143/152 (94.08%), Postives = 146/152 (96.05%), Query Frame = 0

Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSGVPAGHIAVCVGSEYRRFIVRA 60
           MS ETAKSNNIRRIVRLR  LQHWRQ ARVASSRAPPS VPAGHIAVCVGSE RRFIVRA
Sbjct: 1   MSLETAKSNNIRRIVRLRHRLQHWRQMARVASSRAPPSDVPAGHIAVCVGSECRRFIVRA 60

Query: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120
           TFLNHPIFQKLL+EAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW
Sbjct: 61  TFLNHPIFQKLLSEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120

Query: 121 QRRCDEDIRKNSEFLGESRPLLYGFADSKSVC 153
           QRRCDEDIRKNSEFLGES+PLLYGFAD+KSVC
Sbjct: 121 QRRCDEDIRKNSEFLGESKPLLYGFADNKSVC 152

BLAST of CmoCh02G003580 vs. ExPASy TrEMBL
Match: A0A5A7TQK8 (Auxin-responsive protein SAUR64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00010 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.5e-59
Identity = 120/153 (78.43%), Postives = 134/153 (87.58%), Query Frame = 0

Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSGVPAGHIAVCVGSEYRRFIVRA 60
           MS ET+KS+ IRRIVRLRQMLQHWR+ ARVA+SRAPPS VPAGHIAVCVG+  RRFIV  
Sbjct: 1   MSPETSKSHKIRRIVRLRQMLQHWRKKARVAASRAPPSDVPAGHIAVCVGTGCRRFIVPT 60

Query: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120
           TFLNHPIF++LL++AEEEYGF T+G LALPCDESVFEEVLRVVARSEL N+SR  NL D 
Sbjct: 61  TFLNHPIFRQLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVARSELSNTSRTSNLKDL 120

Query: 121 QRRCDEDIR-KNSEFLGESRPLLYGFADSKSVC 153
            RRCDED+R KN EFLGES PLLYGF+D+KSVC
Sbjct: 121 TRRCDEDVRSKNLEFLGESSPLLYGFSDNKSVC 153

BLAST of CmoCh02G003580 vs. ExPASy TrEMBL
Match: A0A1S3C5H3 (auxin-responsive protein SAUR64 OS=Cucumis melo OX=3656 GN=LOC103497270 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.5e-59
Identity = 120/153 (78.43%), Postives = 134/153 (87.58%), Query Frame = 0

Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSGVPAGHIAVCVGSEYRRFIVRA 60
           MS ET+KS+ IRRIVRLRQMLQHWR+ ARVA+SRAPPS VPAGHIAVCVG+  RRFIV  
Sbjct: 51  MSPETSKSHKIRRIVRLRQMLQHWRKKARVAASRAPPSDVPAGHIAVCVGTGCRRFIVPT 110

Query: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120
           TFLNHPIF++LL++AEEEYGF T+G LALPCDESVFEEVLRVVARSEL N+SR  NL D 
Sbjct: 111 TFLNHPIFRQLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVARSELSNTSRTSNLKDL 170

Query: 121 QRRCDEDIR-KNSEFLGESRPLLYGFADSKSVC 153
            RRCDED+R KN EFLGES PLLYGF+D+KSVC
Sbjct: 171 TRRCDEDVRSKNLEFLGESSPLLYGFSDNKSVC 203

BLAST of CmoCh02G003580 vs. ExPASy TrEMBL
Match: A0A0A0LM48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G257100 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.3e-59
Identity = 120/153 (78.43%), Postives = 131/153 (85.62%), Query Frame = 0

Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSGVPAGHIAVCVGSEYRRFIVRA 60
           MS ET+KS+ IRRIVRLRQMLQHWR+ AR A+  APPS VPAGHIAVCVG+  RRFIVR 
Sbjct: 70  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAACTAPPSDVPAGHIAVCVGTGCRRFIVRT 129

Query: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120
           TFLNHPIF KLL++AEEEYGF T+G LALPCDESVFEEVLRVVA SEL NSSR  NL D 
Sbjct: 130 TFLNHPIFLKLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVAHSELSNSSRTSNLKDL 189

Query: 121 QRRCDEDIR-KNSEFLGESRPLLYGFADSKSVC 153
            RRCDED+R KN EFLGESRPLLYGF+D+KSVC
Sbjct: 190 TRRCDEDVRSKNLEFLGESRPLLYGFSDNKSVC 222

BLAST of CmoCh02G003580 vs. NCBI nr
Match: XP_022947562.1 (auxin-responsive protein SAUR71-like [Cucurbita moschata])

HSP 1 Score: 307.8 bits (787), Expect = 5.4e-80
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0

Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSGVPAGHIAVCVGSEYRRFIVRA 60
           MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSGVPAGHIAVCVGSEYRRFIVRA
Sbjct: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSGVPAGHIAVCVGSEYRRFIVRA 60

Query: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120
           TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW
Sbjct: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120

Query: 121 QRRCDEDIRKNSEFLGESRPLLYGFADSKSVC 153
           QRRCDEDIRKNSEFLGESRPLLYGFADSKSVC
Sbjct: 121 QRRCDEDIRKNSEFLGESRPLLYGFADSKSVC 152

BLAST of CmoCh02G003580 vs. NCBI nr
Match: KAG6605036.1 (Auxin-responsive protein SAUR41, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305.1 bits (780), Expect = 3.5e-79
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0

Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSGVPAGHIAVCVGSEYRRFIVRA 60
           MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPS VPAGHIAVCVGSEYRRFIVRA
Sbjct: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSDVPAGHIAVCVGSEYRRFIVRA 60

Query: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120
           TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW
Sbjct: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120

Query: 121 QRRCDEDIRKNSEFLGESRPLLYGFADSKSVC 153
           QRRCDEDIRKNSEFLGESRPLLYGFADSKSVC
Sbjct: 121 QRRCDEDIRKNSEFLGESRPLLYGFADSKSVC 152

BLAST of CmoCh02G003580 vs. NCBI nr
Match: KAG7035051.1 (Auxin-responsive protein SAUR41, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 304.7 bits (779), Expect = 4.5e-79
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0

Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSGVPAGHIAVCVGSEYRRFIVRA 60
           MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPS VPAGHIAVCVGSEYRRFIVRA
Sbjct: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSDVPAGHIAVCVGSEYRRFIVRA 60

Query: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120
           TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW
Sbjct: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120

Query: 121 QRRCDEDIRKNSEFLGESRPLLYGFADSKSVC 153
           QRRCDED+RKNSEFLGESRPLLYGFADSKSVC
Sbjct: 121 QRRCDEDVRKNSEFLGESRPLLYGFADSKSVC 152

BLAST of CmoCh02G003580 vs. NCBI nr
Match: XP_023534044.1 (auxin-responsive protein SAUR71-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.8 bits (769), Expect = 6.5e-78
Identity = 147/152 (96.71%), Postives = 150/152 (98.68%), Query Frame = 0

Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSGVPAGHIAVCVGSEYRRFIVRA 60
           MSQET KSNNIRRIVRLRQMLQHWRQTARVASSRAPPS VPAGHIAVCVGSEYRRFIVRA
Sbjct: 1   MSQETVKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSDVPAGHIAVCVGSEYRRFIVRA 60

Query: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120
           TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRV+ARSELRNSSRNPNLTDW
Sbjct: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVIARSELRNSSRNPNLTDW 120

Query: 121 QRRCDEDIRKNSEFLGESRPLLYGFADSKSVC 153
           QRRCDEDIRKNSEFLGES+PLLYG+ADSKSVC
Sbjct: 121 QRRCDEDIRKNSEFLGESKPLLYGYADSKSVC 152

BLAST of CmoCh02G003580 vs. NCBI nr
Match: XP_023006979.1 (auxin-responsive protein SAUR71-like [Cucurbita maxima])

HSP 1 Score: 288.5 bits (737), Expect = 3.4e-74
Identity = 143/152 (94.08%), Postives = 146/152 (96.05%), Query Frame = 0

Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVASSRAPPSGVPAGHIAVCVGSEYRRFIVRA 60
           MS ETAKSNNIRRIVRLR  LQHWRQ ARVASSRAPPS VPAGHIAVCVGSE RRFIVRA
Sbjct: 1   MSLETAKSNNIRRIVRLRHRLQHWRQMARVASSRAPPSDVPAGHIAVCVGSECRRFIVRA 60

Query: 61  TFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120
           TFLNHPIFQKLL+EAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW
Sbjct: 61  TFLNHPIFQKLLSEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTDW 120

Query: 121 QRRCDEDIRKNSEFLGESRPLLYGFADSKSVC 153
           QRRCDEDIRKNSEFLGES+PLLYGFAD+KSVC
Sbjct: 121 QRRCDEDIRKNSEFLGESKPLLYGFADNKSVC 152

BLAST of CmoCh02G003580 vs. TAIR 10
Match: AT1G19840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 150.6 bits (379), Expect = 1.0e-36
Identity = 80/150 (53.33%), Postives = 105/150 (70.00%), Query Frame = 0

Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVAS-SRAPPSGVPAGHIAVCVGSEYRRFIVR 60
           M+    K + IR IVRLRQML+ WR  AR++S SR  PS VP+GH+AVCVGS  RRF+VR
Sbjct: 1   MAGSLVKCSKIRHIVRLRQMLRRWRNKARLSSVSRCVPSDVPSGHVAVCVGSGCRRFVVR 60

Query: 61  ATFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTD 120
           A++LNHPI   LL +AEEE+GF  QG L +PC+ESVFEE +R ++RS+   SSR     D
Sbjct: 61  ASYLNHPIISNLLVQAEEEFGFANQGPLVIPCEESVFEEAIRFISRSDSSRSSRFTCPDD 120

Query: 121 WQRRCDEDIRKNS--EFLGESRPLLYGFAD 148
            Q +C+  I+  S  + + ESRPLL+G A+
Sbjct: 121 LQ-KCNGGIKIKSKLDLMIESRPLLHGVAE 149

BLAST of CmoCh02G003580 vs. TAIR 10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 146.7 bits (369), Expect = 1.5e-35
Identity = 77/150 (51.33%), Postives = 101/150 (67.33%), Query Frame = 0

Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVAS--SRAPPSGVPAGHIAVCVGSEYRRFIV 60
           M+    K + IR IVRLRQML+ WR  AR++S  SR  PS VP+GH+AV VGS  RRF+V
Sbjct: 1   MAGGLGKCSKIRHIVRLRQMLRRWRDQARMSSSFSRCVPSDVPSGHVAVYVGSSCRRFVV 60

Query: 61  RATFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLT 120
           RAT+LNHP+ + LL +AEEE+GF  QG L +PC+ESVFEE +R ++RS+   S R     
Sbjct: 61  RATYLNHPVLRNLLVQAEEEFGFVNQGPLVIPCEESVFEESIRFISRSDSTRSRRFTCPD 120

Query: 121 DWQRRCD-EDIRKNSEFLGESRPLLYGFAD 148
           D+Q+ C    IR   +   ESRPLL+G  +
Sbjct: 121 DFQKNCHVVGIRSKLDLWIESRPLLHGVTE 150

BLAST of CmoCh02G003580 vs. TAIR 10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 137.9 bits (346), Expect = 6.8e-33
Identity = 77/152 (50.66%), Postives = 100/152 (65.79%), Query Frame = 0

Query: 7   KSNNIRRIVRLRQMLQHWRQTARVASSRAPP-SGVPAGHIAVCVGSEYRRFIVRATFLNH 66
           K+N I  +VR+RQML+ W++ A + SS   P S VP GH+AV VG   RR++VRA  LNH
Sbjct: 3   KNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHLNH 62

Query: 67  PIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPN-----LTDW 126
           PIF++LL EAEEEYGF   G LA+PCDES+FE+++ +V R E  +SS   N     L D 
Sbjct: 63  PIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAATLEDL 122

Query: 127 QRRCDEDIRKNSEFLGESRPLLYGFADSKSVC 153
           +R     + KN+    ESRPLL G A+ KSVC
Sbjct: 123 RRCSHVGLAKNNV---ESRPLLPGIAE-KSVC 150

BLAST of CmoCh02G003580 vs. TAIR 10
Match: AT4G34750.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 137.9 bits (346), Expect = 6.8e-33
Identity = 77/152 (50.66%), Postives = 100/152 (65.79%), Query Frame = 0

Query: 7   KSNNIRRIVRLRQMLQHWRQTARVASSRAPP-SGVPAGHIAVCVGSEYRRFIVRATFLNH 66
           K+N I  +VR+RQML+ W++ A + SS   P S VP GH+AV VG   RR++VRA  LNH
Sbjct: 3   KNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHLNH 62

Query: 67  PIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPN-----LTDW 126
           PIF++LL EAEEEYGF   G LA+PCDES+FE+++ +V R E  +SS   N     L D 
Sbjct: 63  PIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAATLEDL 122

Query: 127 QRRCDEDIRKNSEFLGESRPLLYGFADSKSVC 153
           +R     + KN+    ESRPLL G A+ KSVC
Sbjct: 123 RRCSHVGLAKNNV---ESRPLLPGIAE-KSVC 150

BLAST of CmoCh02G003580 vs. TAIR 10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 135.2 bits (339), Expect = 4.4e-32
Identity = 73/148 (49.32%), Postives = 96/148 (64.86%), Query Frame = 0

Query: 1   MSQETAKSNNIRRIVRLRQMLQHWRQTARVAS-SRAPPSGVPAGHIAVCVGSEYRRFIVR 60
           M+    K + IR IV+LRQML+ WR  AR++S  R+ PS VP+GH+AV VG   RRF+V 
Sbjct: 1   MAGGIGKCSKIRHIVKLRQMLRQWRNKARMSSVRRSVPSDVPSGHVAVYVGRSCRRFVVL 60

Query: 61  ATFLNHPIFQKLLTEAEEEYGFTTQGALALPCDESVFEEVLRVVARSELRNSSRNPNLTD 120
           AT+LNHPI   LL +AEEE+GF  QG L +PC+ESVFEE +R + R     SSR     D
Sbjct: 61  ATYLNHPILMNLLVKAEEEFGFANQGPLVIPCEESVFEESIRFITR-----SSRFTCTDD 120

Query: 121 WQRRCDEDIRKNSEFLGESRPLLYGFAD 148
            ++     IR   + L ESRPLL+G ++
Sbjct: 121 LKKNRHGGIRSKLDLLMESRPLLHGVSE 143

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O645383.8e-1249.21Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S... [more]
Q9SA496.5e-1240.43Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S... [more]
Q9SGU28.5e-1240.43Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S... [more]
Q9LTV31.1e-1145.59Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 S... [more]
O656955.5e-1147.76Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S... [more]
Match NameE-valueIdentityDescription
A0A6J1G6T12.6e-80100.00auxin-responsive protein SAUR71-like OS=Cucurbita moschata OX=3662 GN=LOC1114513... [more]
A0A6J1L3P01.6e-7494.08auxin-responsive protein SAUR71-like OS=Cucurbita maxima OX=3661 GN=LOC111499611... [more]
A0A5A7TQK81.5e-5978.43Auxin-responsive protein SAUR64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A1S3C5H31.5e-5978.43auxin-responsive protein SAUR64 OS=Cucumis melo OX=3656 GN=LOC103497270 PE=3 SV=... [more]
A0A0A0LM483.3e-5978.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G257100 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
XP_022947562.15.4e-80100.00auxin-responsive protein SAUR71-like [Cucurbita moschata][more]
KAG6605036.13.5e-7999.34Auxin-responsive protein SAUR41, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7035051.14.5e-7998.68Auxin-responsive protein SAUR41, partial [Cucurbita argyrosperma subsp. argyrosp... [more]
XP_023534044.16.5e-7896.71auxin-responsive protein SAUR71-like [Cucurbita pepo subsp. pepo][more]
XP_023006979.13.4e-7494.08auxin-responsive protein SAUR71-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT1G19840.11.0e-3653.33SAUR-like auxin-responsive protein family [more]
AT1G75590.11.5e-3551.33SAUR-like auxin-responsive protein family [more]
AT4G34750.16.8e-3350.66SAUR-like auxin-responsive protein family [more]
AT4G34750.26.8e-3350.66SAUR-like auxin-responsive protein family [more]
AT5G10990.14.4e-3249.32SAUR-like auxin-responsive protein family [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 16..102
e-value: 5.7E-28
score: 96.9
NoneNo IPR availablePANTHERPTHR31374:SF183SMALL AUXIN-UP RNA-RELATEDcoord: 7..144
NoneNo IPR availablePANTHERPTHR31374AUXIN-INDUCED PROTEIN-LIKE-RELATEDcoord: 7..144

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G003580.1CmoCh02G003580.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin