CmoCh02G003490 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh02G003490
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR24-like
LocationCmo_Chr02: 1750420 .. 1754910 (-)
RNA-Seq ExpressionCmoCh02G003490
SyntenyCmoCh02G003490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCTGGTGCTCCTAATGATAAGTATGGAGAAAGGTTTACCGAGCGCTTTCGTGTCTTAAATGGTAGGAAATACTAAGCTCCAAATGATCATTTTGTGCTACTAGTGATCAGTATAGAGAAAAGGTTCAAATCTGAGCTGAATTTGAACCAATCCAATGACAAAAGGAAAGACGCAGTTGTGCCAAATGATCAAAGGGATTATACGCTGAATTTTTAATTGGTTCAAAAACCTGACAAGATATGTGTTCTGGTGTAAACCTGATATATTAAATCTGATCATATTTAGATGCTCACAATAAACAAGTCAACGTGCTCGAGGCTGAAAACGATCGTAGAACTTTGTGGATGATTTATGCCTCTAAGAATTGGCATTTTTTGACTAAGCTATGTACTTTGACTTGGGCTTTTTGTTCTCCTTAATGAGAACCATTCTTTGCTATGGTCCATAATTTGGTACATATAAGGCCTGCAGAGTCTCCTTTGACCTAGACATTGACGTAGCTGGTCACTCTCTCATGGAAAGCCAATCACATGGAGGTTCTGTTCTTCCATTTTCAACGTAATGCACTCTGTCTGTAAGCATTTAATTCAGTGTAAAAGCTTGGACAATGATTTGACTTTTCATGATCGAACAACTTAGCCAATGAAAATGGAAATTTGTGGTGTAACTGCGGAGAATGTGAAGAGAGACAGAGAAGGAAATTGGTGTGTCTTTTCTAAGTTGAACAAAACCATGTGAAGTGACCCACTCAAATACCTAACCATCAGACTTCAATACCCCACTTTGCCATTTGAATTCCATCGCTCACAGCATAACTCTTTCTTCCAAAACTCTATAAATTTGAACATCAAATGAGCCTTCAAACACCAAATTCAACTCATTCCTAGTGTTCTACACTAATCAGATCAAAGCTTTAGACTTTTCTCAGTCTTTCATCTCAAGCAAATGGGTATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAGATCCTAAAGATGCAGTCAGGTTTTACCAAAAGTCAGCTGGATGTGCCAAAAGGTCATGTGGCTGTTTATGTGGGAGAGATCCAAAGAAAGCGGTTCGTGGTTCCAATTTCTTACTTAAACCATCCATCATTCCAAAAGCTACTCAGCCATGCAGAAGAAGAGTTTGGCTTCCATCATCCACAAGGGGGTCTAACAATTCCTTGCAAGGAGGATGCCTTCGTTGATCTCACCTCTAGACTGCACGTATCTTGAAGGATGCAGAAGAAAGGACAATCATATGCCATTTTTGACAATTTTTTCCGACTCATTTTACTTTTCGACACATACTAGAGTGTTGTAGAGTGGGAAACCTTCCTACCTGTAAATGAGTTGGCATTGTAAAGTTACTTATACCACAGGATTAATGAAAATAGACCGATTCAACATCAACTTCTGTATATCATTTTTTCTGCTAATCTGTGCTTTCCAACTTCAAACGTTAAACTGATCTGAACAAAATTGGTGTCCTGTGCTAATTTATGAACTACTCTAATATAGACAATCCTAAATCTATCTGTGTAGCAACTCTTTAGTGAATATGTTATTCAGTAACTATACAGTGTTGTGGTAGAGCAGTCTCATCTGTTCATCAAAAGTCCGAAGATAGAAATTATAGCATAGCAGATGTTAAATTTTATCATAGATGAAGTTTGTCCCACTCATGGATTTTGAGATATCTAACTTCCTTGTGTGTTGTCCGATTTCTTACTCGATCTTCAAAGCAGACTGACTTCTCCTACTCCTCCTCCTTTAGGATAGGATCGTCGTTGGTCATTCTTTCGCTAATGATCTAATGAGCTTTCACTAATGATCTAATGAGGTCACTATTTGATAGTCATTCGCGCAAACGCGCGAGGGACGAGACTTTCTATTGCTTGTTTTTCACTACCAAGACAATGGTCTCTCTCATCTATAAGCAAGACAATGACGCTGAACTGAAGAAAGCTCAATGTGAAAGAAGCAAAAGATCCACTTCCGCCACGAAAGGAGAGATTCGTAAATATCCAGTTTAAAAAGTATATAGAACTTTCGTTTGAATTTCCTGCAACAATCAGGATTTGACACAACAAGGAACTGAAAATATTGTAGTGGGAACATCATAATTCTATCCGACATCTTTCCCTCACCAATGGACAGCTAGTTCCAGCTATAGAAGTTGCTTGAAGTGGATAAAACTACTACATTTAACAAATATAAACATGATTAGATTCTGTATCCTTTGATTTGCAATAAGATGCATTTGATGTCTCTCTTGTTCTTATTCAACAAGGGCACTATGCCAATGATGTAACCATTTCTTTCTTACTGTGAAAGTGATCTCCTTGATATCTTGTTTTTTTCTTTATTCGAGCATCCAGTTCAGCTAACCAAGCTTGGTCGCTGGAATGGATAATGACTTGAACCAAACAACTGGGCTGGCATTGCATACAACCAAGAGAGAGGTGAAAAATCTTTTATAAGTTGGGAAGATCCCTAATAGTCCTCTTAGATACCTAACCACCAGTCTTAAAGTGCCCATTGGAAAAGCACCAACCATCAGCAAAACTATTTTCATGAACTATAAATAAGGATATCGAGTAAACTTTAAAACAGTCATTTACTACTTCCTCTTCAAATTTGTTCCACATCAATTGAAACAGCAAGCTTAGTAATGGGAATCTTTCCATTCCAGATTCTTTTTGTCAAGCAAATTCTAAAATGCCATCAGATTTCACCAAAAACCCGTATGTTTCAAAAGGTCATGTAGCATACGAAATGATTTGTGGTTCCGATATCATACTTGAATCATCCTTCATTCTAAAAGCTCCTTATGTATGCCGAGGAAGAGTTTGTATTCCGTCATCCTCAGGTTGTCAAACAATTCCTGGCAAAAAAGATGTCTTTCTTGATTTCATTTCTAGATTGGAAGTTTCTTAAAGATGAATGAAGAGGCAAAAGAAAATTCACCAAGTTTTGACACTTTTGCCCCTTGTTTTTTTGACTCGTTTATGAACTAAGATTAAAATGTTACAGGAAATCCAAGAACAAATCCTTCCAAAATGTTAACAAACGACTCTGATAAATTCTATGTCATGTAAGCCAAGTATCTTCTTGCTACTGATATATGACTAAATAGGCAGAAATGATAGAATAGTCACGATTTAGTGTTGCATTGAAACAGTTGTTAGTAATTGAAACAGTAAAATTATGACTATCAAATACATGCCTATGGTAGGGGCCTTCAGTTTCAATTAAGAAAATATGGTTCACATATGGGGGATTGAAAAAGATTAAATTTATCCAAACCTGTTTATCCTTTTTCTGCTCAAATGAGCATCGTTAGGGAACACAGCTAATACACTTTGCATTTTCATGGTCATTCATTTATTCAAGAAAAACCTTTGTGCTCAGCTGAATTCAAGTGAAGTAGCAAGAACATGAAGATGAAAAACCATTCAGGAGAATAAAATTCATGAAGGGGCACAGTGTTCTTGTAAGAAAATGTGATTATCTATTTCAATTTTCTATCTCTTTTCTGCTACTCAACATTTACATGTAGAAGCTAACTCTACATTGATGTTCTACATTTAACTATGTGAAAAAATCGAAGGGAATCTGACAAAATTGTGAGGAGGATTGTTTTTCTTCTCTCTTTCAGCAAGATTGCAGCTTGGATGTGAGATTGATGAAGACATCTTCTCTGCAAGGAATTGTAAGACCTCCAGTTGGATGTTTAAATCCAAATTCTTCTTCGGCACGGTTGAGCAAAGCAGAAAAAGAAGGATGGTTTAAGTATGCTATTGGAACTACAAATCTCTTTGTCTCAATATCTCCCACATAAACTGCAATATGGCCTTTGGGAACGCCACACCGGTTTCTGGAAGAAGCGGTATGCATTTTGACAGCTTGCTTGGCATTGAGAAGAAGTGAAAGTAGTCTGATTCCCATTTTCCGCTCGATGCAGATCAAAAAGTTGGGAAGTGTAGTTCTTGAATGAAGATGTGCTTGAAATTTGAGTTGGAGATTGAAGTTTATTTGAACCGTATTTATGGATTCAGAACGGAGAAGTGGTGAGAAGAAAACAGTATCAAGTTGGTCTTTAGGATGGCCTACTTCATAAATGCTCACATTGGTTGCTTATTTGGTTTGAATAGACGCACTTCATCATGTGCCCTAACAAACCATTGAGCAGTCCCATTTGCTCCAATGAGGTGCAGTTATAGTCCAAAAGGGAAAGTACAACGTTCTGAGGATTAATTGTTGCTCCATTTGTTTGTGAACTAATGGAAACAGTTGGACTATGACTTGACTTGTGATGAATGGAAACAATTGACCAATGAGCCTGAAATTAGTGGTATGAATTTCAGAGAATGTGCTGTGAGAGAAGAAAATTGGGTGCCTTTTTCTGAGATGAGGCAAAGCCATGTGAAGGGGTATTCTCAAATATACCCAACTACCAGACATCAGTACCCCACTTAG

mRNA sequence

ATGTCATCTGGTGCTCCTAATGATAAGTATGGAGAAAGGTTTACCGAGCGCTTTCGTGTCTTAAATGTCTTTCATCTCAAGCAAATGGGTATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAGATCCTAAAGATGCAGTCAGGTTTTACCAAAAGTCAGCTGGATGTGCCAAAAGGTCATGTGGCTGTTTATGTGGGAGAGATCCAAAGAAAGCGGTTCGTGGTTCCAATTTCTTACTTAAACCATCCATCATTCCAAAAGCTACTCAGCCATGCAGAAGAAGAGTTTGGCTTCCATCATCCACAAGGGGGTCTAACAATTCCTTGCAAGGAGGATGCCTTCGTTGATCTCACCTCTAGACTGCACACAATGGTCTCTCTCATCTATAAGCAAGACAATGACGCTGAACTGAAGAAAGCTCAATGTGAAAGAAGCAAAAGATCCACTTCCGCCACGAAAGGAGAGATTCATTCTTTTTGTCAAGCAAATTCTAAAATGCCATCAGATTTCACCAAAAACCCGTATGTTTCAAAAGGTCATGTAGCATACGAAATGATTTGTGGTTCCGATATCATACTTGAATCATCCTTCATTCTAAAAGCTCCTTATCAAGATTGCAGCTTGGATGTGAGATTGATGAAGACATCTTCTCTGCAAGGAATTACGCACTTCATCATGTGCCCTAACAAACCATTGAGCAGTCCCATTTGCTCCAATGAGTTGGACTATGACTTGACTTGTGATGAATGGAAACAATTGACCAATGAGCCTGAAATTAGTGGTATGAATTTCAGAGAATGTGCTGTGAGAGAAGAAAATTGGGTGCCTTTTTCTGAGATGAGGCAAAGCCATGTGAAGGGGTATTCTCAAATATACCCAACTACCAGACATCAGTACCCCACTTAG

Coding sequence (CDS)

ATGTCATCTGGTGCTCCTAATGATAAGTATGGAGAAAGGTTTACCGAGCGCTTTCGTGTCTTAAATGTCTTTCATCTCAAGCAAATGGGTATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAGATCCTAAAGATGCAGTCAGGTTTTACCAAAAGTCAGCTGGATGTGCCAAAAGGTCATGTGGCTGTTTATGTGGGAGAGATCCAAAGAAAGCGGTTCGTGGTTCCAATTTCTTACTTAAACCATCCATCATTCCAAAAGCTACTCAGCCATGCAGAAGAAGAGTTTGGCTTCCATCATCCACAAGGGGGTCTAACAATTCCTTGCAAGGAGGATGCCTTCGTTGATCTCACCTCTAGACTGCACACAATGGTCTCTCTCATCTATAAGCAAGACAATGACGCTGAACTGAAGAAAGCTCAATGTGAAAGAAGCAAAAGATCCACTTCCGCCACGAAAGGAGAGATTCATTCTTTTTGTCAAGCAAATTCTAAAATGCCATCAGATTTCACCAAAAACCCGTATGTTTCAAAAGGTCATGTAGCATACGAAATGATTTGTGGTTCCGATATCATACTTGAATCATCCTTCATTCTAAAAGCTCCTTATCAAGATTGCAGCTTGGATGTGAGATTGATGAAGACATCTTCTCTGCAAGGAATTACGCACTTCATCATGTGCCCTAACAAACCATTGAGCAGTCCCATTTGCTCCAATGAGTTGGACTATGACTTGACTTGTGATGAATGGAAACAATTGACCAATGAGCCTGAAATTAGTGGTATGAATTTCAGAGAATGTGCTGTGAGAGAAGAAAATTGGGTGCCTTTTTCTGAGATGAGGCAAAGCCATGTGAAGGGGTATTCTCAAATATACCCAACTACCAGACATCAGTACCCCACTTAG

Protein sequence

MSSGAPNDKYGERFTERFRVLNVFHLKQMGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLHTMVSLIYKQDNDAELKKAQCERSKRSTSATKGEIHSFCQANSKMPSDFTKNPYVSKGHVAYEMICGSDIILESSFILKAPYQDCSLDVRLMKTSSLQGITHFIMCPNKPLSSPICSNELDYDLTCDEWKQLTNEPEISGMNFRECAVREENWVPFSEMRQSHVKGYSQIYPTTRHQYPT
Homology
[Close]
BLAST of CmoCh02G003490 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.3e-23
Identity = 52/84 (61.90%), Postives = 64/84 (76.19%), Query Frame = 0 

Query: 40  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGF 99
           AK+IL   +    +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10  AKKILSRSAAAVSAP---PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGF 69

Query: 100 HHPQGGLTIPCKEDAFVDLTSRLH 124
            HP GGLTIPC ED F+++TSRLH
Sbjct: 70  DHPMGGLTIPCPEDTFINVTSRLH 90

[Close]
BLAST of CmoCh02G003490 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.6e-23
Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 0 

Query: 40  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGF 99
           AK+IL   +G   +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10  AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 100 HHPQGGLTIPCKEDAFVDLTSRL 123
            HP GGLTIPC ED F+++TSRL
Sbjct: 70  DHPMGGLTIPCPEDTFINVTSRL 89

[Close]
BLAST of CmoCh02G003490 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.1e-22
Identity = 50/77 (64.94%), Postives = 60/77 (77.92%), Query Frame = 0 

Query: 45  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQG 104
           K+ S  T +    PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12  KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 105 GLTIPCKEDAFVDLTSR 122
           GLTIPC ED F+++TSR
Sbjct: 72  GLTIPCPEDTFINVTSR 88

[Close]
BLAST of CmoCh02G003490 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.6e-22
Identity = 49/78 (62.82%), Postives = 61/78 (78.21%), Query Frame = 0 

Query: 45  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQG 104
           K+ S  T +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF HP G
Sbjct: 12  KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 105 GLTIPCKEDAFVDLTSRL 123
           GLTIPC ED F+++TSRL
Sbjct: 72  GLTIPCHEDTFINVTSRL 89

[Close]
BLAST of CmoCh02G003490 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 8.0e-22
Identity = 49/78 (62.82%), Postives = 61/78 (78.21%), Query Frame = 0 

Query: 45  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQG 104
           K+ S  T +    PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP G
Sbjct: 12  KILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMG 71

Query: 105 GLTIPCKEDAFVDLTSRL 123
           GLTIPC ED F+++TSRL
Sbjct: 72  GLTIPCPEDTFINVTSRL 89

[Close]
BLAST of CmoCh02G003490 vs. ExPASy TrEMBL
Match: A0A6J1G6U1 (auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC111451399 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 5.7e-47
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 29  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 88
           MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK
Sbjct: 1   MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 89  LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH 124
           LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH
Sbjct: 61  LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH 95

[Close]
BLAST of CmoCh02G003490 vs. ExPASy TrEMBL
Match: A0A6J1G6T7 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111451395 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.8e-45
Identity = 92/94 (97.87%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 29  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 88
           MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQK
Sbjct: 1   MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 89  LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL 123
           LLSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSRL
Sbjct: 61  LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRL 94

[Close]
BLAST of CmoCh02G003490 vs. ExPASy TrEMBL
Match: A0A6J1KZJ6 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111499688 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 7.0e-45
Identity = 91/94 (96.81%), Postives = 93/94 (98.94%), Query Frame = 0 

Query: 29  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 88
           MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ 
Sbjct: 1   MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQN 60

Query: 89  LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL 123
           LLSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSRL
Sbjct: 61  LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRL 94

[Close]
BLAST of CmoCh02G003490 vs. ExPASy TrEMBL
Match: A0A6J1CYH2 (auxin-responsive protein SAUR23-like OS=Momordica charantia OX=3673 GN=LOC111015444 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 7.0e-45
Identity = 90/95 (94.74%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 29  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 88
           MGIRLLSLVPHAK ILKMQSGFTK+ LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQ+
Sbjct: 1   MGIRLLSLVPHAKHILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 89  LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH 124
           LLSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSRLH
Sbjct: 61  LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLH 95

[Close]
BLAST of CmoCh02G003490 vs. ExPASy TrEMBL
Match: A0A6J1FU85 (auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC111448836 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.6e-44
Identity = 89/95 (93.68%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 29  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 88
           MGIR LSLVPHAKQILKMQ GFTK+QLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQ+
Sbjct: 1   MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 89  LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH 124
           LLSHAEE+FGFHHPQGGLTIPCKEDAF+DLTSRLH
Sbjct: 61  LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLH 95

[Close]
BLAST of CmoCh02G003490 vs. NCBI nr
Match: XP_022947576.1 (auxin-responsive protein SAUR23-like [Cucurbita moschata] >KAG6605026.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 198.0 bits (502), Expect = 1.2e-46
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 29  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 88
           MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK
Sbjct: 1   MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 89  LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH 124
           LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH
Sbjct: 61  LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH 95

[Close]
BLAST of CmoCh02G003490 vs. NCBI nr
Match: XP_023533294.1 (auxin-responsive protein SAUR23-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 196.1 bits (497), Expect = 4.5e-46
Identity = 93/95 (97.89%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 29  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 88
           MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQK
Sbjct: 1   MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFMVPISYLNHPSFQK 60

Query: 89  LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH 124
           +LSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH
Sbjct: 61  ILSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH 95

[Close]
BLAST of CmoCh02G003490 vs. NCBI nr
Match: XP_023533292.1 (auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.4 bits (490), Expect = 2.9e-45
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 29  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 88
           MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQK
Sbjct: 1   MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 89  LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL 123
           LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL
Sbjct: 61  LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL 94

[Close]
BLAST of CmoCh02G003490 vs. NCBI nr
Match: XP_022947571.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022947572.1 auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6605023.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.0 bits (489), Expect = 3.8e-45
Identity = 92/94 (97.87%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 29  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 88
           MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQK
Sbjct: 1   MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 89  LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL 123
           LLSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSRL
Sbjct: 61  LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRL 94

[Close]
BLAST of CmoCh02G003490 vs. NCBI nr
Match: XP_023007091.1 (auxin-responsive protein SAUR24-like [Cucurbita maxima])

HSP 1 Score: 191.0 bits (484), Expect = 1.5e-44
Identity = 91/94 (96.81%), Postives = 93/94 (98.94%), Query Frame = 0 

Query: 29  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 88
           MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ 
Sbjct: 1   MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQN 60

Query: 89  LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL 123
           LLSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSRL
Sbjct: 61  LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRL 94

[Close]
BLAST of CmoCh02G003490 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.6 bits (296), Expect = 8.5e-27
Identity = 58/99 (58.59%), Postives = 72/99 (72.73%), Query Frame = 0 

Query: 29  MGIRLLSLVPHAKQILK----MQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHP 88
           M IR+  ++  +KQIL+    + S  + S LDVPKG++AVYVGE   KRFVVP+SYL+ P
Sbjct: 1   MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 89  SFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH 124
           SFQ LL  AEEEFGF HP GGLTIPC E+ F+DL SR +
Sbjct: 61  SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]
BLAST of CmoCh02G003490 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.9 bits (294), Expect = 1.5e-26
Identity = 57/97 (58.76%), Postives = 74/97 (76.29%), Query Frame = 0 

Query: 29  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQ 88
           M IR+  ++  +KQ+LK  S  + + + +PKGH+AVYVGE +Q++RFVVP++YL+HP FQ
Sbjct: 1   MAIRISRVLQSSKQLLKSLS-HSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 89  KLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLHT 125
           KLL  AEEEFGF HP GGLTIPC E  F+DL SRL T
Sbjct: 61  KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLST 96

[Close]
BLAST of CmoCh02G003490 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.2 bits (282), Expect = 3.6e-25
Identity = 59/104 (56.73%), Postives = 76/104 (73.08%), Query Frame = 0 

Query: 29  MGIRLLSLVPHAKQILKMQSGFTKSQLD------VPKGHVAVYVG---EIQRKRFVVPIS 88
           MG+   ++    KQILK+ S   +++        VPKGHVAVYVG   E+++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 89  YLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDL-TSRL 123
           +LNHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL  SRL
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRL 104

[Close]
BLAST of CmoCh02G003490 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.7 bits (278), Expect = 1.0e-24
Identity = 64/101 (63.37%), Postives = 72/101 (71.29%), Query Frame = 0 

Query: 29  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGE--IQRKRFVVPISYLNHPSF 88
           M IR LS V ++KQ  K QS        VPKGHVAVYVGE    +KRFVVPISYLNHPSF
Sbjct: 1   MAIR-LSRVINSKQSQKQQS-------RVPKGHVAVYVGEEMESKKRFVVPISYLNHPSF 60

Query: 89  QKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLHTMVS 128
           Q LLS AEEEFGF+HP GGLTIPC+E+ FV L +    +VS
Sbjct: 61  QGLLSRAEEEFGFNHPIGGLTIPCREETFVGLLNSYGCIVS 93

[Close]
BLAST of CmoCh02G003490 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.5 bits (275), Expect = 2.3e-24
Identity = 52/84 (61.90%), Postives = 64/84 (76.19%), Query Frame = 0 

Query: 40  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGF 99
           AK+IL   +    +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10  AKKILSRSAAAVSAP---PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGF 69

Query: 100 HHPQGGLTIPCKEDAFVDLTSRLH 124
            HP GGLTIPC ED F+++TSRLH
Sbjct: 70  DHPMGGLTIPCPEDTFINVTSRLH 90

The following BLAST results are available for this feature:
BLAST of CmoCh02G003490 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FJF63.3e-2361.90Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S... [more]
Q9FK625.6e-2362.65Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S... [more]
Q9FJG02.1e-2264.94Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S... [more]
Q9FJF73.6e-2262.82Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S... [more]
Q9FJG18.0e-2262.82Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S... [more]
BLAST of CmoCh02G003490 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G6U15.7e-47100.00auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC1114513... [more]
A0A6J1G6T71.8e-4597.87auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114513... [more]
A0A6J1KZJ67.0e-4596.81auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111499688... [more]
A0A6J1CYH27.0e-4594.74auxin-responsive protein SAUR23-like OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1FU851.6e-4493.68auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC1114488... [more]
BLAST of CmoCh02G003490 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022947576.11.2e-46100.00auxin-responsive protein SAUR23-like [Cucurbita moschata] >KAG6605026.1 Auxin-re... [more]
XP_023533294.14.5e-4697.89auxin-responsive protein SAUR23-like [Cucurbita pepo subsp. pepo][more]
XP_023533292.12.9e-4598.94auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo][more]
XP_022947571.13.8e-4597.87auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022947572.1 auxin-... [more]
XP_023007091.11.5e-4496.81auxin-responsive protein SAUR24-like [Cucurbita maxima][more]
BLAST of CmoCh02G003490 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G38840.18.5e-2758.59SAUR-like auxin-responsive protein family [more]
AT2G21210.11.5e-2658.76SAUR-like auxin-responsive protein family [more]
AT4G34810.13.6e-2556.73SAUR-like auxin-responsive protein family [more]
AT4G34800.11.0e-2463.37SAUR-like auxin-responsive protein family [more]
AT5G18060.12.3e-2461.90SAUR-like auxin-responsive protein family [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 32..121
e-value: 4.0E-26
score: 91.0
NoneNo IPR availablePANTHERPTHR31929:SF121AUXIN-RESPONSIVE PROTEIN SAUR21-LIKEcoord: 29..124
NoneNo IPR availablePANTHERPTHR31929SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATEDcoord: 29..124

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G003490.1CmoCh02G003490.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin