CmoCh02G003390 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh02G003390
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr02: 1733488 .. 1738781 (+)
RNA-Seq ExpressionCmoCh02G003390
SyntenyCmoCh02G003390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGGTTTAGGTAAGATATCGGAACCACGAACCGCTTCCGTTGGATCTCTCCTACATAAACAGCCACATGACCTTTTGGAACGTCCAACTGGTTTTTGGTAAAACTTGACTGCATCTTTAGAATTTGCTTGGCATGAGGAACCAAAGATAGCAACCGAATCCCCATTTTCTCAAACGAAAGGCAGTCGGAATAATGTTCTGATCTGATTGGTATAGAGCTAACTAGAAGAGGAAGTAGAAGTTGAAATGAGTTGAGGGTGGTGTTTGAAGGCTCATTTTGATGTTTATATTTATAATATTTCAGAAGGAAATGCTATGCTGATGACTCCGACCATTCCAGTGCCCAAGTGGGGTACTGATGTCTGGTAGTTTGGTATTGAGAATACCCCCTTCACATGGCTTTGCCCCATTTCATAAAAAGGCACCCAATTTTCTCTGAAATTCATACCACTAATTTCAGGCTCATTGGTCCTTCACATGGCTTTGCCCCATCTTATAAGAAAATGTTTAGCAGCCACGAGATAGAGTTGATTATCAGTATCAGCATTTCTATTACTCACATATTAGTTTAAAGCTCAACATAATTTCATTCATTCACATTCTAGAAGGCATTGCTCTTGGACTTCCTAAAACATTTTAGTATTAGTTCACAAATGAGTCGAGCAACAATAGATTCAAATAACTTTGTACTTGCCCTTTTGCTCTTCACTCTCTAGAAAACTTGCAATCTAGAAGTGAGATCAATGAAGGCATCCTCCTTGCAAGGAATTGTGAGACCCCCTTGAGGATGTTGGAAACCAAACTCTTCCTCGGCATATTTAAGGAGCTGTTGGAATGAAGGATGATTCAAGTATGATATTGGAACCACAAATCGTTTCCTTTGCCTCTCTCCCACGTAAACTGCTACATGACCTTTCGGGACATACTGGTTTTTGGTGAAACCTGATGGCATTTTTAGAATTTGCTTGACAAAAAGAATCTGGAATGGAAAGATTCCCATTACTGAGCTTGCTGTTTCAATTGATGTGGAACAAATTTGAAGAGGAAGTAGTAAATGACTGTTTTGAAGTTTACTTGATATCCTTATTTATAGTTCAAGAAAATGGTTTTGCTGGTGTTTGGTGCTTTTCCAATGGGCACTTTAAGACTGGCGGTTAGGTATCTAAGAAGACTATTAGGGATCTTCCCAACTTATAAAAGATTTTTCACCTCTCTCTTGGTTGTATGCAATGCCAGCCCAGTTGTTTGGTTCAAGTCATTATCCATTCCAGCGACCAAGCTTGGTTAGCTGAACTGGATGCTCGAATAAAGAAAAAAACAAGATATCAAGGAGATCACGTTCACAGTAAGAGAGAAATGATTACATCATTGGCATAGTGCCCTTGTTGAATAAGGACAAGAGAGATATCAAATGCATCTTATTGTAAATCAAAGGATACAGAAGCTAAGTACATGTACACCTAGTACTTCAAGACAAATCATTTAATAAGAATCTAATCATGTTTATATTTGTTTAATGTAGTAGTTTCATCCACTTCAAACAACTTCTATAGCTGGAACTAGCTGTGCATTGGTGAGGGAAAGATGTTGGATAGAATTATGATGTTCCCACTACCATATTTTTAGTTCCTTATTGTGTCAAATCCTGATTGTTGGAGGAAATTCAGACGAAAGTTCTATGTACTTTTTAAACTGAATATTTACAAATCTCTCCTTTCTTGGCGGAAGTGGATCTTTTGCTTCTTTCACATCAATGATCGAAGCTTGGAATCAAGATTTTCCAAATAATCTTATTTAATGACATGATGAGCTTTCTTCACTTAAGCGTCATGTAACAGTGAAAAGCAAGCGATAGAAAGTCTCATCCCTCGTGTATTTGCACGGACCACTATCAAATGGTGATCTCATTAGATCATTGGCGAAAGAAGGACCAACGATGATCCTATCCTAAAGGAGAAGGGGGAGTAGGAGAAGTGTAACAGCCCAAGCCCATTGCTAGCAGATATTATCCTCTTTGGGCTTTCTCTTTTGGGTTTTCCCTCAAAGTTTTTAAAATGCGTCTACTAGGGAAAGGTTTTCACTCCCTTATAAAGGGGGTTTCATTCTCCTCCCTAACCGAGGTGGGATTTCACAAGAAGTCAGTCTTCTTTCAAGAAATCCGACAACACCCAAGAAACTTAGATATCTCAAAATCCATGAGTGGACAAACTTCATCAATGATAAAATTTAACATCTGCTATGCTATAGCGCACAGTCAATATAGCTTATACATGTTATAATGTACATGCAATGGGAAAATTTTCTATTCATTTACATGAACTGTCTATCTAGTCGTATTCTACGACTAACGAAAAAAGAAAAAGAAAAGTTGGGCAAAACTGGGCGAGTGGGCAGAGGAATTCTTTTGTCATAATCATTCAAGAACAATGCAGCCTTGAATGAGATAAAAGCATATCCTCTGCTGGATTGTCAAACCACCAATAGAATGATTGTATCTGAACTCTTCTTCGGCGTTCTCAATCAAATACATAAGTATTAGATGGTTTTGAGTATGATTCCTTAGTTAAAAAATTAAAAGATTTCTCTCTACCCAAAAGCACAGATTAGGAATCATAGATCACCAGAAGAAATGATATATAGAAGTCTATGCTGAATTGGTCTATTTTCATTAATCCTGTGGTATAAGTAACTTTACAATGCAACTCATTTACAGGTAGAAAGGTTTCCCACTCTACAACAATCTAGTATGTGTCTAAAAGTAAATGAGTCGGAAAAAAAATTGTCAAAAACGGCAGATGATTGTCCTTTCTTCTGCATCCTTCAAGATACTTGCAATCTGGAGGTGAGATCAATGAAGGCATCCTCCTTGCAAGGAATTGTTAGACTCCCCTGTGGATGATGGAAGCCAAACTCTTCCTCTGCATGGCTGAGTAGTTTTTGGAATAACGGATGGTTTAAGTAAGAAATTGGAACCAAGAACCGCTTTCTTTGGATCTCTCCTACATAAACAGCCACATGGCCTTTTGGCACATCCAACTGACTTTTGGTAAAACCTGACTGCATCTTTAGGATTTGCTTGGCATGAGGAACCAAGGATAGCAATCGAATTCCCATTTTCTCGAGAAGGACTCTTAGAAAGGTCTAAAGCTTTGATCTGGTTAGTATAGAACCTGTAAGAGAAATCAACACTTGGACTGAGTTGAATTTGGTGTTTGAAGGATCATTTGATGTTCAGTTTTTATAGAGTTTTGGAAAAAAGAGTTGTGCTGTGAGCGATGGTATTCAAATGGCAGAGTGGGGTATTGAAGTCTGATGGTTAGGTATTTGAGTAGGCCGTTTCACATGGTTTTGTTCAACTTAGAAAAGACACACCAATTTCCTTCTCTCTCTCTTCACATTCTCCGCTGTTACACCACAAATTTCCATTTTCATTGGCTAAGTTGTTCGATTATGAAAAGTCAAATCATTGTCCAAGCTTTTACACTGAATTAAATGCTTACAGACAGAGTGCATTACGTTGAAAATGGAAGACCAGAACCTCCATGTGAATGGCTTTCCATGAGAGAGTGACCAGCTACGTCATTCGACTCAACGTCTAGGTCAAAGGAGACTCTGCAGGCCTTATATGTACCAAATTGTGGACCATATCAAAGAATGGTTCTCATTAAGGAGAACTAAAAGACCAAGTCAAAGTACATAGCTTAGTCAAAAAATGCTAACTCTTAGAGGCATAAATCATCCACAAAGTTCTACCATCATTTTCAGCCCCAAGCACGTTGACTTGTTTACACCAGAACACATATCTTGTCTGGTTTTTGAACCTATAAAAAATTGGGTTTCCCCTATCTTCATATGGTATCGAGCAATTTGCTCTTATTTCTTCATAACAAGCGGCTGCATTGTCTTATGATACATTCCTTTGTGAAATGTATACTATACTGATCAAATTCCCTATTGAAAGAAAATCATTGATGCTTTATCTATTTTTCGATATTCATTTCCTCTATACAATGTGTAATCTCTTTGATCATTTGGCACAACCAAGTCTTTCCTTTTGTCATTGAATTGGTTCAAATTCAGCTCAGATTTGAGCATTTTCTCTTTACTGATCACTAGGAGAACAAAATGATCATTTGGAGCTTAGTATTTCCTACCATTTAAGACACGAGAGCGCTCGATAAACCTTTCTCCATACTGATCATTAGGAGCACAAAATGACATCTATCCAACTCAGATTTTTTCACAATTCAAGAATGTCTACCTATATCTCATACGGTACTTCAGCTTTCTTCCTCAAATCTGAATACTAGATTCTGCACAAATTGATAGAATCTAGTTCAAACATATCTAGCTTCTCAACCTTTAAGCAAGTCCAACAGTCGGTTAACAACTCTTCCTCTGGACCCAAAGTAATTGTGCTAGCCTTGGAGAGAAGGCTACTAACTTCATCAATCTTAAGCTGTGGCAAGACCATACAACCTCTTTCAAGTCTGTTGATCCATGTACGAAAAACTGAGATTCCTGCTATGCAAATTTCTCAACCATTCCATGTCTTGGATGAATTCCTACATAGCCAACCAAATACTAAAAGAGCAGCTGGTTTAAGAATGAAGCTTGAATCAAGAATTACCTCTCTGGTTTTCTCCAACAATAACTCATGGCCACATCCATAGACTTCAAAGCATTGAAACTTCCTACAAGTGGAAGTCAAATTTGAATCAACATAAGCTGGAGAAGGCACCCTGTTCTTTTAGTATCCAATAAGAGGGAAAACGTAAGATGCAAGAATTCCTCAAAACTCTTAAAACGAGAACAGAAAATATGAAGTTTGTGTAAACAACTTTATAGGCTCTTCCAATAATATCAGCACAGGATGCTACGAACAAAACATGCCAGGAAAGCAAAATGAGTGGAGAAAATGGACATGGTAAGCCAATTGAGACAAAGACCATTGATGAGTGAGGAAATGAATTTGATTTCATGTAACAGATAAGTCAGACCTATGGAGAAACATTATGCACATCTCTTATTACACACCAGCAAACATGTATTAGACAATTCTAAATGGTAAACCTTTAAGATCATGGCAAGCTTAAGACAAGCGTTATTCTTGTGTCTGAGAAAATTTACAAATGCATTGGCATCTCATTTATTGTTCTGATTAGTCTATTATCAACAAGAATTTATTCCTGTTTCTGTCCCTCTAATATATATTTTTCCTCTGGATTGGATCAGAGATGCAGCCAATGACCGATGGTGTGAGCTTGCAACCTGGACCCACTGTAAGTTGA

mRNA sequence

ATGGATGGTTTAGGTAAGATATCGGAACCACGAACCGCTTCCGTTGGATCTCTCCTACATAAACAGCCACATGACCTTTTGGAACGTCCAACTGAAGGAAATGCTATGCTGATGACTCCGACCATTCCAGTGCCCAAGTGGGGTACTGATTTCAAGAAAATGGTTTTGCTGGTGTTTGGTGCTTTTCCAATGGGCACTTTAAGACTGGCGTTTCATCCACTTCAAACAACTTCTATAGCTGGAACTAGCTGTGCATTGACAGAGTGCATTACGTTGAAAATGGAAGACCAGAACCTCCATGCTCTTCCAATAATATCAGCACAGGATGCTACGAACAAAACATGCCAGGAAAGCAAAATGAGTGGAGAAAATGGACATGAGATGCAGCCAATGACCGATGGTGTGAGCTTGCAACCTGGACCCACTGTAAGTTGA

Coding sequence (CDS)

ATGGATGGTTTAGGTAAGATATCGGAACCACGAACCGCTTCCGTTGGATCTCTCCTACATAAACAGCCACATGACCTTTTGGAACGTCCAACTGAAGGAAATGCTATGCTGATGACTCCGACCATTCCAGTGCCCAAGTGGGGTACTGATTTCAAGAAAATGGTTTTGCTGGTGTTTGGTGCTTTTCCAATGGGCACTTTAAGACTGGCGTTTCATCCACTTCAAACAACTTCTATAGCTGGAACTAGCTGTGCATTGACAGAGTGCATTACGTTGAAAATGGAAGACCAGAACCTCCATGCTCTTCCAATAATATCAGCACAGGATGCTACGAACAAAACATGCCAGGAAAGCAAAATGAGTGGAGAAAATGGACATGAGATGCAGCCAATGACCGATGGTGTGAGCTTGCAACCTGGACCCACTGTAAGTTGA

Protein sequence

MDGLGKISEPRTASVGSLLHKQPHDLLERPTEGNAMLMTPTIPVPKWGTDFKKMVLLVFGAFPMGTLRLAFHPLQTTSIAGTSCALTECITLKMEDQNLHALPIISAQDATNKTCQESKMSGENGHEMQPMTDGVSLQPGPTVS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..144

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G003390.1CmoCh02G003390.1mRNA